DNA polymerase alpha chain like domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G13840 |
| fragaria_vesca | FvH4_1g25470 FvH4_1g25470 FvH4_1g25470 FvH4_1g25470 FvH4_1g25470 FvH4_1g25470 FvH4_1g25470 |
| malus_domestica | MD10G1052200.v1.1 |
| prunus_persica | Prupe.8G062500_v2.0.a1 Prupe.8G062500_v2.0.a1 |
| pyrus_communis | pycom10g03690 pycom15g12500 |
| rosa_chinensis | RchiOBHm_Chr2g0123601 |
| rosa_laevigata | RLG00000018759 |
| rosa_multiflora | Rmu_ssc0000091.1_g000015 |
| rosa_roxburghii | Rroxscaffold_2G00120560 |
| rosa_rugosa | Rorug02G0246400 |
| rosa_samantha | Rh2AG305600 Rh2BG313500 Rh2CG291700 Rh2DG329400 |
| rosa_wichuraiana | Rw2G024480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 530 |
| AcsI | RAATTY | 2 cut(s) | 200, 246 |
| AcuI | CTGAAG | 1 cut(s) | 465 |
| AfaI | GTAC | 1 cut(s) | 296 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 449 |
| AgeI | ACCGGT | 1 cut(s) | 258 |
| AgsI | TTSAA | 5 cut(s) | 56, 74, 194, 199, 560 |
| AjnI | CCWGG | 3 cut(s) | 301, 355, 385 |
| AluBI | AGCT | 3 cut(s) | 67, 209, 314 |
| AluI | AGCT | 3 cut(s) | 67, 209, 314 |
| Alw26I | GTCTC | 2 cut(s) | 51, 516 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 49 |
| AoxI | GGCC | 1 cut(s) | 374 |
| ApeKI | GCWGC | 1 cut(s) | 436 |
| ApoI | RAATTY | 2 cut(s) | 200, 246 |
| AseI | ATTAAT | 1 cut(s) | 339 |
| AsiGI | ACCGGT | 1 cut(s) | 258 |
| AsuHPI | GGTGA | 2 cut(s) | 248, 620 |
| BauI | CACGAG | 1 cut(s) | 459 |
| BbvI | GCAGC | 1 cut(s) | 423 |
| BccI | CCATC | 2 cut(s) | 577, 631 |
| BciT130I | CCWGG | 3 cut(s) | 303, 357, 387 |
| BcoDI | GTCTC | 2 cut(s) | 51, 516 |
| BfaI | CTAG | 1 cut(s) | 642 |
| BfmI | CTRYAG | 1 cut(s) | 216 |
| BisI | GCNGC | 1 cut(s) | 437 |
| BlsI | GCNGC | 1 cut(s) | 438 |
| Bme1390I | CCNGG | 3 cut(s) | 303, 357, 387 |
| BmrFI | CCNGG | 3 cut(s) | 303, 357, 387 |
| BmsI | GCATC | 1 cut(s) | 160 |
| BpuEI | CTTGAG | 2 cut(s) | 147, 399 |
| BsaAI | YACGTR | 1 cut(s) | 242 |
| BsaBI | GATNNNNATC | 2 cut(s) | 227, 231 |
| BsaJI | CCNNGG | 2 cut(s) | 301, 355 |
| BsaWI | WCCGGW | 1 cut(s) | 258 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 414, 444, 597, 627 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 449 |
| Bse118I | RCCGGY | 1 cut(s) | 258 |
| Bse3DI | GCAATG | 1 cut(s) | 414 |
| Bse8I | GATNNNNATC | 2 cut(s) | 227, 231 |
| BseBI | CCWGG | 3 cut(s) | 303, 357, 387 |
| BseDI | CCNNGG | 2 cut(s) | 301, 355 |
| BseGI | GGATG | 1 cut(s) | 183 |
| BseJI | GATNNNNATC | 2 cut(s) | 227, 231 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 449 |
| BseMI | GCAATG | 1 cut(s) | 414 |
| BseMII | CTCAG | 2 cut(s) | 56, 111 |
| BseRI | GAGGAG | 1 cut(s) | 96 |
| BseXI | GCAGC | 1 cut(s) | 423 |
| BseYI | CCCAGC | 2 cut(s) | 79, 205 |
| BshFI | GGCC | 1 cut(s) | 376 |
| BshTI | ACCGGT | 1 cut(s) | 258 |
| BsiSI | CCGG | 1 cut(s) | 259 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 449 |
| BsmAI | GTCTC | 2 cut(s) | 51, 516 |
| BsnI | GGCC | 1 cut(s) | 376 |
| BspANI | GGCC | 1 cut(s) | 376 |
| BspCNI | CTCAG | 2 cut(s) | 55, 110 |
| BspHI | TCATGA | 1 cut(s) | 534 |
| BsrDI | GCAATG | 1 cut(s) | 414 |
| BsrFI | RCCGGY | 1 cut(s) | 258 |
| BssAI | RCCGGY | 1 cut(s) | 258 |
| BssECI | CCNNGG | 2 cut(s) | 301, 355 |
| BssSI | CACGAG | 1 cut(s) | 459 |
| Bst2BI | CACGAG | 1 cut(s) | 459 |
| Bst2UI | CCWGG | 3 cut(s) | 303, 357, 387 |
| Bst4CI | ACNGT | 2 cut(s) | 220, 467 |
| Bst6I | CTCTTC | 1 cut(s) | 29 |
| BstBAI | YACGTR | 1 cut(s) | 242 |
| BstDEI | CTNAG | 2 cut(s) | 42, 97 |
| BstF5I | GGATG | 1 cut(s) | 183 |
| BstMAI | GTCTC | 2 cut(s) | 51, 516 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 382 |
| BstNI | CCWGG | 3 cut(s) | 303, 357, 387 |
| BstSCI | CCNGG | 3 cut(s) | 301, 355, 385 |
| BstSFI | CTRYAG | 1 cut(s) | 216 |
| BstV1I | GCAGC | 1 cut(s) | 423 |
| BsuRI | GGCC | 1 cut(s) | 376 |
| BtsCI | GGATG | 1 cut(s) | 183 |
| BtsIMutI | CAGTG | 1 cut(s) | 225 |
| CaiI | CAGNNNCTG | 1 cut(s) | 49 |
| CciI | TCATGA | 1 cut(s) | 534 |
| Cfr10I | RCCGGY | 1 cut(s) | 258 |
| Csp6I | GTAC | 1 cut(s) | 295 |
| CspAI | ACCGGT | 1 cut(s) | 258 |
| CviAII | CATG | 2 cut(s) | 397, 535 |
| CviQI | GTAC | 1 cut(s) | 295 |
| DdeI | CTNAG | 2 cut(s) | 42, 97 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 530 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 530 |
| Eam1104I | CTCTTC | 1 cut(s) | 29 |
| EarI | CTCTTC | 1 cut(s) | 29 |
| Eco147I | AGGCCT | 1 cut(s) | 376 |
| Eco32I | GATATC | 1 cut(s) | 229 |
| Eco57I | CTGAAG | 1 cut(s) | 465 |
| EcoRII | CCWGG | 3 cut(s) | 301, 355, 385 |
| EcoRV | GATATC | 1 cut(s) | 229 |
| FaeI | CATG | 2 cut(s) | 400, 538 |
| FaiI | YATR | 7 cut(s) | 383, 398, 428, 434, 536, 598, 600 |
| FatI | CATG | 2 cut(s) | 396, 534 |
| FauNDI | CATATG | 1 cut(s) | 598 |
| Fnu4HI | GCNGC | 1 cut(s) | 437 |
| FokI | GGATG | 1 cut(s) | 170 |
| Fsp4HI | GCNGC | 1 cut(s) | 437 |
| FspBI | CTAG | 1 cut(s) | 642 |
| GluI | GCNGC | 1 cut(s) | 437 |
| GsaI | CCCAGC | 2 cut(s) | 83, 209 |
| HaeIII | GGCC | 1 cut(s) | 376 |
| HapII | CCGG | 1 cut(s) | 259 |
| Hin1II | CATG | 2 cut(s) | 400, 538 |
| HpaII | CCGG | 1 cut(s) | 259 |
| HphI | GGTGA | 2 cut(s) | 248, 620 |
| Hpy188I | TCNGA | 1 cut(s) | 237 |
| Hpy188III | TCNNGA | 4 cut(s) | 164, 461, 535, 634 |
| HpyAV | CCTTC | 3 cut(s) | 80, 103, 617 |
| HpyCH4III | ACNGT | 2 cut(s) | 220, 467 |
| HpyCH4IV | ACGT | 1 cut(s) | 241 |
| HpyCH4V | TGCA | 2 cut(s) | 439, 518 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 382 |
| HpyF3I | CTNAG | 2 cut(s) | 42, 97 |
| HpySE526I | ACGT | 1 cut(s) | 241 |
| Hsp92II | CATG | 2 cut(s) | 400, 538 |
| LmnI | GCTCC | 1 cut(s) | 72 |
| Lsp1109I | GCAGC | 1 cut(s) | 423 |
| LweI | GCATC | 1 cut(s) | 160 |
| MaeI | CTAG | 1 cut(s) | 642 |
| MaeII | ACGT | 1 cut(s) | 241 |
| MaeIII | GTNAC | 2 cut(s) | 331, 461 |
| MboII | GAAGA | 6 cut(s) | 16, 150, 179, 463, 466, 592 |
| MluCI | AATT | 4 cut(s) | 194, 200, 246, 483 |
| MmeI | TCCRAC | 1 cut(s) | 583 |
| MseI | TTAA | 3 cut(s) | 324, 339, 548 |
| MslI | CAYNNNNRTG | 2 cut(s) | 431, 539 |
| MspA1I | CMGCKG | 1 cut(s) | 314 |
| MspI | CCGG | 1 cut(s) | 259 |
| MspR9I | CCNGG | 3 cut(s) | 303, 357, 387 |
| MvaI | CCWGG | 3 cut(s) | 303, 357, 387 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 382 |
| NdeI | CATATG | 1 cut(s) | 598 |
| NlaIII | CATG | 2 cut(s) | 400, 538 |
| NmuCI | GTSAC | 2 cut(s) | 331, 461 |
| PagI | TCATGA | 1 cut(s) | 534 |
| PceI | AGGCCT | 1 cut(s) | 376 |
| PinAI | ACCGGT | 1 cut(s) | 258 |
| PkrI | GCNGC | 1 cut(s) | 438 |
| Ppu21I | YACGTR | 1 cut(s) | 242 |
| PshBI | ATTAAT | 1 cut(s) | 339 |
| Psp6I | CCWGG | 3 cut(s) | 301, 355, 385 |
| PspFI | CCCAGC | 2 cut(s) | 79, 205 |
| PspGI | CCWGG | 3 cut(s) | 301, 355, 385 |
| PstNI | CAGNNNCTG | 1 cut(s) | 49 |
| PvuII | CAGCTG | 1 cut(s) | 314 |
| RsaI | GTAC | 1 cut(s) | 296 |
| RsaNI | GTAC | 1 cut(s) | 295 |
| RseI | CAYNNNNRTG | 2 cut(s) | 431, 539 |
| SaqAI | TTAA | 3 cut(s) | 324, 339, 548 |
| SatI | GCNGC | 1 cut(s) | 437 |
| ScrFI | CCNGG | 3 cut(s) | 303, 357, 387 |
| SfaNI | GCATC | 1 cut(s) | 160 |
| SfcI | CTRYAG | 1 cut(s) | 216 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 431, 539 |
| SmlI | CTYRAG | 3 cut(s) | 13, 162, 414 |
| SmoI | CTYRAG | 3 cut(s) | 13, 162, 414 |
| Sse9I | AATT | 4 cut(s) | 194, 200, 246, 483 |
| SseBI | AGGCCT | 1 cut(s) | 376 |
| SspMI | CTAG | 1 cut(s) | 642 |
| StuI | AGGCCT | 1 cut(s) | 376 |
| StyD4I | CCNGG | 3 cut(s) | 301, 355, 385 |
| TaaI | ACNGT | 2 cut(s) | 220, 467 |
| TaiI | ACGT | 1 cut(s) | 244 |
| TasI | AATT | 4 cut(s) | 194, 200, 246, 483 |
| TatI | WGTACW | 1 cut(s) | 294 |
| Tru1I | TTAA | 3 cut(s) | 324, 339, 548 |
| Tru9I | TTAA | 3 cut(s) | 324, 339, 548 |
| TscAI | CASTG | 1 cut(s) | 225 |
| TseFI | GTSAC | 2 cut(s) | 331, 461 |
| TseI | GCWGC | 1 cut(s) | 436 |
| Tsp45I | GTSAC | 2 cut(s) | 331, 461 |
| TspGWI | ACGGA | 1 cut(s) | 603 |
| TspRI | CASTG | 1 cut(s) | 225 |
| VspI | ATTAAT | 1 cut(s) | 339 |
| XapI | RAATTY | 2 cut(s) | 200, 246 |
| XspI | CTAG | 1 cut(s) | 642 |