Plant calmodulin-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g24980 FvH4_6g24980 FvH4_6g24980 FvH4_6g24980 FvH4_6g24980 |
| malus_domestica | MD12G1087500.v1.1 MD14G1082900.v1.1 |
| prunus_persica | Prupe.7G047600_v2.0.a1 Prupe.7G047600_v2.0.a1 |
| pyrus_communis | pycom12g07530 |
| rosa_chinensis | RchiOBHm_Chr2g0124711 |
| rosa_laevigata | RLG00000018816 |
| rosa_multiflora | Rmu_co8137268.1_g000001 Rmu_co8184604.1_g000001 Rmu_co8188110.1_g000001 Rmu_co8448307.1_g000001 Rmu_sc0007057.1_g000004 Rmu_sc0042199.1_g000001 Rmu_sc0042237.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00119720 |
| rosa_rugosa | Rorug02G0252000 |
| rosa_samantha | Rh2AG311000 Rh2BG319500 Rh2CG298400 Rh2DG335100 |
| rosa_wichuraiana | Rw2G025160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 26 |
| Acc36I | ACCTGC | 3 cut(s) | 26, 431, 2602 |
| Acc65I | GGTACC | 2 cut(s) | 1631, 2979 |
| AccB1I | GGYRCC | 3 cut(s) | 1631, 2979, 2989 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2025 |
| AccBSI | CCGCTC | 1 cut(s) | 468 |
| AciI | CCGC | 6 cut(s) | 208, 466, 1269, 1490, 2161, 3319 |
| AclI | AACGTT | 1 cut(s) | 1029 |
| AcsI | RAATTY | 4 cut(s) | 320, 1776, 2467, 2869 |
| AcuI | CTGAAG | 8 cut(s) | 690, 717, 1896, 2481, 3090, 3493, 3674, 3774 |
| AcvI | CACGTG | 1 cut(s) | 3206 |
| AdeI | CACNNNGTG | 2 cut(s) | 1133, 1533 |
| AfaI | GTAC | 8 cut(s) | 383, 768, 1547, 1633, 1929, 2482, 2981, 3149 |
| AfeI | AGCGCT | 1 cut(s) | 2024 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 61, 605, 661, 1601, 1628, 1759, 2025, 2122, 2600 |
| AflIII | ACRYGT | 1 cut(s) | 2632 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2323 |
| AhlI | ACTAGT | 1 cut(s) | 497 |
| AjnI | CCWGG | 4 cut(s) | 1758, 1845, 3381, 3432 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 3438, 3470, 3491, 3523 |
| AleI | CACNNNNGTG | 1 cut(s) | 1640 |
| Alw21I | GWGCWC | 2 cut(s) | 350, 1731 |
| Alw26I | GTCTC | 9 cut(s) | 413, 906, 1707, 2657, 2804, 2891, 2965, 3081, 3411 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1421 |
| Ama87I | CYCGRG | 1 cut(s) | 3252 |
| Aor51HI | AGCGCT | 1 cut(s) | 2024 |
| AoxI | GGCC | 2 cut(s) | 958, 3722 |
| ApaI | GGGCCC | 1 cut(s) | 962 |
| ApeKI | GCWGC | 8 cut(s) | 139, 426, 492, 996, 1266, 1858, 2348, 2886 |
| ApoI | RAATTY | 4 cut(s) | 320, 1776, 2467, 2869 |
| AseI | ATTAAT | 1 cut(s) | 2151 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 934, 1168, 2289, 3366 |
| Asp718I | GGTACC | 2 cut(s) | 1631, 2979 |
| AspLEI | GCGC | 2 cut(s) | 213, 2025 |
| AspS9I | GGNCC | 6 cut(s) | 958, 959, 1271, 2325, 2617, 3722 |
| AsuC2I | CCSGG | 1 cut(s) | 352 |
| AvaI | CYCGRG | 1 cut(s) | 3252 |
| AvaII | GGWCC | 3 cut(s) | 1271, 2325, 2617 |
| AxyI | CCTNAGG | 2 cut(s) | 660, 2985 |
| BaeGI | GKGCMC | 1 cut(s) | 962 |
| BamHI | GGATCC | 2 cut(s) | 2125, 3056 |
| BanI | GGYRCC | 3 cut(s) | 1631, 2979, 2989 |
| BanII | GRGCYC | 3 cut(s) | 350, 962, 1731 |
| BauI | CACGAG | 2 cut(s) | 561, 3717 |
| BbrPI | CACGTG | 1 cut(s) | 3206 |
| BbsI | GAAGAC | 4 cut(s) | 818, 2001, 2568, 3402 |
| Bbv12I | GWGCWC | 2 cut(s) | 350, 1731 |
| BbvCI | CCTCAGC | 2 cut(s) | 1862, 3807 |
| BbvI | GCAGC | 8 cut(s) | 126, 413, 504, 1008, 1278, 1870, 2360, 2898 |
| BccI | CCATC | 5 cut(s) | 196, 2648, 2759, 3203, 3598 |
| BceAI | ACGGC | 3 cut(s) | 96, 2174, 3306 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 24, 58, 2537, 2571, 2576, 2610 |
| BciT130I | CCWGG | 4 cut(s) | 1760, 1847, 3383, 3434 |
| BclI | TGATCA | 1 cut(s) | 1813 |
| BcnI | CCSGG | 1 cut(s) | 352 |
| BcoDI | GTCTC | 9 cut(s) | 413, 906, 1707, 2657, 2804, 2891, 2965, 3081, 3411 |
| BcuI | ACTAGT | 1 cut(s) | 497 |
| BfaI | CTAG | 6 cut(s) | 255, 276, 498, 1211, 1754, 2525 |
| BfmI | CTRYAG | 4 cut(s) | 140, 231, 2346, 2964 |
| BfoI | RGCGCY | 1 cut(s) | 2026 |
| BfuAI | ACCTGC | 3 cut(s) | 26, 431, 2602 |
| BglII | AGATCT | 2 cut(s) | 200, 2353 |
| BlpI | GCTNAGC | 1 cut(s) | 3275 |
| Bme1390I | CCNGG | 5 cut(s) | 352, 1760, 1847, 3383, 3434 |
| Bme18I | GGWCC | 3 cut(s) | 1271, 2325, 2617 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2323 |
| BmeT110I | CYCGRG | 1 cut(s) | 3252 |
| BmgT120I | GGNCC | 6 cut(s) | 958, 959, 1271, 2325, 2617, 3722 |
| BmrFI | CCNGG | 5 cut(s) | 352, 1760, 1847, 3383, 3434 |
| BmrI | ACTGGG | 1 cut(s) | 2722 |
| BmsI | GCATC | 8 cut(s) | 214, 1167, 1223, 1753, 1960, 2190, 3787, 3807 |
| BmuI | ACTGGG | 1 cut(s) | 2722 |
| BpiI | GAAGAC | 4 cut(s) | 818, 2001, 2568, 3402 |
| BpmI | CTGGAG | 5 cut(s) | 582, 2047, 2226, 3664, 3843 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1862, 3807, 3888 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3275 |
| BpuEI | CTTGAG | 4 cut(s) | 623, 761, 1745, 2039 |
| BpuMI | CCSGG | 1 cut(s) | 352 |
| BsaAI | YACGTR | 2 cut(s) | 851, 3206 |
| BsaBI | GATNNNNATC | 1 cut(s) | 391 |
| BsaI | GGTCTC | 4 cut(s) | 413, 1707, 2804, 2965 |
| BsaJI | CCNNGG | 4 cut(s) | 124, 351, 2121, 2607 |
| BsaWI | WCCGGW | 1 cut(s) | 2100 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 262, 292, 754, 784 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 61, 605, 661, 1601, 1628, 1759, 2025, 2122, 2600 |
| Bse1I | ACTGG | 7 cut(s) | 1622, 1642, 2404, 2728, 2775, 3030, 3647 |
| Bse21I | CCTNAGG | 2 cut(s) | 660, 2985 |
| Bse3DI | GCAATG | 5 cut(s) | 2896, 2929, 3097, 3177, 3245 |
| Bse8I | GATNNNNATC | 1 cut(s) | 391 |
| BseBI | CCWGG | 4 cut(s) | 1760, 1847, 3383, 3434 |
| BseDI | CCNNGG | 4 cut(s) | 124, 351, 2121, 2607 |
| BseGI | GGATG | 7 cut(s) | 1768, 1876, 2205, 2617, 3391, 3796, 3822 |
| BseJI | GATNNNNATC | 1 cut(s) | 391 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 61, 605, 661, 1601, 1628, 1759, 2025, 2122, 2600 |
| BseMI | GCAATG | 5 cut(s) | 2896, 2929, 3097, 3177, 3245 |
| BseNI | ACTGG | 7 cut(s) | 1622, 1642, 2404, 2728, 2775, 3030, 3647 |
| BseRI | GAGGAG | 6 cut(s) | 29, 141, 1076, 2675, 3036, 3824 |
| BseSI | GKGCMC | 1 cut(s) | 962 |
| BseXI | GCAGC | 8 cut(s) | 126, 413, 504, 1008, 1278, 1870, 2360, 2898 |
| BsgI | GTGCAG | 4 cut(s) | 1728, 2577, 2949, 3234 |
| BshFI | GGCC | 2 cut(s) | 960, 3724 |
| BshNI | GGYRCC | 3 cut(s) | 1631, 2979, 2989 |
| BsiHKAI | GWGCWC | 2 cut(s) | 350, 1731 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3252 |
| BsiSI | CCGG | 3 cut(s) | 62, 351, 2101 |
| BslFI | GGGAC | 3 cut(s) | 447, 637, 2641 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 61, 605, 661, 1601, 1628, 1759, 2025, 2122, 2600 |
| BsmAI | GTCTC | 9 cut(s) | 413, 906, 1707, 2657, 2804, 2891, 2965, 3081, 3411 |
| BsmBI | CGTCTC | 1 cut(s) | 906 |
| BsmFI | GGGAC | 3 cut(s) | 447, 637, 2641 |
| BsmI | GAATGC | 2 cut(s) | 643, 3808 |
| BsnI | GGCC | 2 cut(s) | 960, 3724 |
| Bso31I | GGTCTC | 4 cut(s) | 413, 1707, 2804, 2965 |
| BsoBI | CYCGRG | 1 cut(s) | 3252 |
| Bsp120I | GGGCCC | 1 cut(s) | 958 |
| Bsp1286I | GDGCHC | 3 cut(s) | 350, 962, 1731 |
| Bsp1407I | TGTACA | 2 cut(s) | 1545, 2480 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3275 |
| BspACI | CCGC | 6 cut(s) | 208, 466, 1269, 1490, 2161, 3319 |
| BspANI | GGCC | 2 cut(s) | 960, 3724 |
| BspMAI | CTGCAG | 3 cut(s) | 144, 235, 2350 |
| BspMI | ACCTGC | 3 cut(s) | 26, 431, 2602 |
| BspQI | GCTCTTC | 4 cut(s) | 338, 475, 634, 960 |
| BspT107I | GGYRCC | 3 cut(s) | 1631, 2979, 2989 |
| BspTNI | GGTCTC | 4 cut(s) | 413, 1707, 2804, 2965 |
| BsrBI | CCGCTC | 1 cut(s) | 468 |
| BsrDI | GCAATG | 5 cut(s) | 2896, 2929, 3097, 3177, 3245 |
| BsrGI | TGTACA | 2 cut(s) | 1545, 2480 |
| BsrI | ACTGG | 7 cut(s) | 1622, 1642, 2404, 2728, 2775, 3030, 3647 |
| BssECI | CCNNGG | 4 cut(s) | 124, 351, 2121, 2607 |
| BssSI | CACGAG | 2 cut(s) | 561, 3717 |
| BssT1I | CCWWGG | 1 cut(s) | 2121 |
| Bst2BI | CACGAG | 2 cut(s) | 561, 3717 |
| Bst2UI | CCWGG | 4 cut(s) | 1760, 1847, 3383, 3434 |
| Bst4CI | ACNGT | 9 cut(s) | 540, 766, 1096, 1318, 1706, 1950, 2290, 2668, 3334 |
| BstAUI | TGTACA | 2 cut(s) | 1545, 2480 |
| BstBAI | YACGTR | 2 cut(s) | 851, 3206 |
| BstC8I | GCNNGC | 3 cut(s) | 1506, 2375, 3294 |
| BstDSI | CCRYGG | 1 cut(s) | 2607 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1757 |
| BstF5I | GGATG | 7 cut(s) | 1768, 1876, 2205, 2617, 3391, 3796, 3822 |
| BstH2I | RGCGCY | 1 cut(s) | 2026 |
| BstHHI | GCGC | 2 cut(s) | 213, 2025 |
| BstMAI | GTCTC | 9 cut(s) | 413, 906, 1707, 2657, 2804, 2891, 2965, 3081, 3411 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 148, 1735, 2603, 3742 |
| BstNI | CCWGG | 4 cut(s) | 1760, 1847, 3383, 3434 |
| BstNSI | RCATGY | 5 cut(s) | 627, 1556, 2636, 3110, 3296 |
| BstSCI | CCNGG | 5 cut(s) | 350, 1758, 1845, 3381, 3432 |
| BstSFI | CTRYAG | 4 cut(s) | 140, 231, 2346, 2964 |
| BstSLI | GKGCMC | 1 cut(s) | 962 |
| BstV1I | GCAGC | 8 cut(s) | 126, 413, 504, 1008, 1278, 1870, 2360, 2898 |
| BstV2I | GAAGAC | 4 cut(s) | 818, 2001, 2568, 3402 |
| BstX2I | RGATCY | 8 cut(s) | 200, 670, 1618, 2125, 2353, 2722, 3056, 3538 |
| BstYI | RGATCY | 8 cut(s) | 200, 670, 1618, 2125, 2353, 2722, 3056, 3538 |
| Bsu36I | CCTNAGG | 2 cut(s) | 660, 2985 |
| BsuRI | GGCC | 2 cut(s) | 960, 3724 |
| BtgI | CCRYGG | 1 cut(s) | 2607 |
| BtgZI | GCGATG | 1 cut(s) | 1983 |
| BtsCI | GGATG | 7 cut(s) | 1768, 1876, 2205, 2617, 3391, 3796, 3822 |
| BtsI | GCAGTG | 1 cut(s) | 1563 |
| BtsIMutI | CAGTG | 7 cut(s) | 762, 1248, 1419, 1563, 1635, 1711, 3037 |
| BveI | ACCTGC | 3 cut(s) | 26, 431, 2602 |
| Cac8I | GCNNGC | 3 cut(s) | 1506, 2375, 3294 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1421 |
| CfoI | GCGC | 2 cut(s) | 213, 2025 |
| Cfr13I | GGNCC | 6 cut(s) | 958, 959, 1271, 2325, 2617, 3722 |
| CseI | GACGC | 1 cut(s) | 454 |
| Csp6I | GTAC | 8 cut(s) | 382, 767, 1546, 1632, 1928, 2481, 2980, 3148 |
| CviQI | GTAC | 8 cut(s) | 382, 767, 1546, 1632, 1928, 2481, 2980, 3148 |
| DraIII | CACNNNGTG | 2 cut(s) | 1133, 1533 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2323 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2323 |
| EciI | GGCGGA | 1 cut(s) | 3308 |
| Ecl136II | GAGCTC | 2 cut(s) | 348, 1729 |
| Eco130I | CCWWGG | 1 cut(s) | 2121 |
| Eco24I | GRGCYC | 3 cut(s) | 350, 962, 1731 |
| Eco31I | GGTCTC | 4 cut(s) | 413, 1707, 2804, 2965 |
| Eco32I | GATATC | 1 cut(s) | 2229 |
| Eco47I | GGWCC | 3 cut(s) | 1271, 2325, 2617 |
| Eco47III | AGCGCT | 1 cut(s) | 2024 |
| Eco53kI | GAGCTC | 2 cut(s) | 348, 1729 |
| Eco57I | CTGAAG | 8 cut(s) | 690, 717, 1896, 2481, 3090, 3493, 3674, 3774 |
| Eco72I | CACGTG | 1 cut(s) | 3206 |
| Eco81I | CCTNAGG | 2 cut(s) | 660, 2985 |
| Eco88I | CYCGRG | 1 cut(s) | 3252 |
| EcoICRI | GAGCTC | 2 cut(s) | 348, 1729 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1757 |
| EcoRI | GAATTC | 1 cut(s) | 2869 |
| EcoRII | CCWGG | 4 cut(s) | 1758, 1845, 3381, 3432 |
| EcoRV | GATATC | 1 cut(s) | 2229 |
| EcoT14I | CCWWGG | 1 cut(s) | 2121 |
| EcoT22I | ATGCAT | 1 cut(s) | 1768 |
| EcoT38I | GRGCYC | 3 cut(s) | 350, 962, 1731 |
| ErhI | CCWWGG | 1 cut(s) | 2121 |
| Esp3I | CGTCTC | 1 cut(s) | 906 |
| FaqI | GGGAC | 3 cut(s) | 447, 637, 2641 |
| FauI | CCCGC | 2 cut(s) | 473, 1483 |
| FauNDI | CATATG | 1 cut(s) | 1807 |
| FbaI | TGATCA | 1 cut(s) | 1813 |
| FokI | GGATG | 7 cut(s) | 1775, 1883, 2212, 2624, 3398, 3803, 3829 |
| FriOI | GRGCYC | 3 cut(s) | 350, 962, 1731 |
| FspBI | CTAG | 6 cut(s) | 255, 276, 498, 1211, 1754, 2525 |
| GlaI | GCGC | 2 cut(s) | 212, 2024 |
| GsuI | CTGGAG | 5 cut(s) | 582, 2047, 2226, 3664, 3843 |
| HaeII | RGCGCY | 1 cut(s) | 2026 |
| HaeIII | GGCC | 2 cut(s) | 960, 3724 |
| HapII | CCGG | 3 cut(s) | 62, 351, 2101 |
| HgaI | GACGC | 1 cut(s) | 454 |
| HhaI | GCGC | 2 cut(s) | 213, 2025 |
| Hin6I | GCGC | 2 cut(s) | 211, 2023 |
| HinP1I | GCGC | 2 cut(s) | 211, 2023 |
| HindIII | AAGCTT | 2 cut(s) | 1053, 2277 |
| HpaII | CCGG | 3 cut(s) | 62, 351, 2101 |
| Hpy166II | GTNNAC | 3 cut(s) | 292, 729, 2481 |
| Hpy8I | GTNNAC | 3 cut(s) | 292, 729, 2481 |
| Hpy99I | CGWCG | 2 cut(s) | 756, 920 |
| HpyCH4III | ACNGT | 9 cut(s) | 540, 766, 1096, 1318, 1706, 1950, 2290, 2668, 3334 |
| HpyCH4IV | ACGT | 4 cut(s) | 850, 1029, 1105, 3205 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 148, 1735, 2603, 3742 |
| HpySE526I | ACGT | 4 cut(s) | 850, 1029, 1105, 3205 |
| HspAI | GCGC | 2 cut(s) | 211, 2023 |
| KpnI | GGTACC | 2 cut(s) | 1635, 2983 |
| Ksp22I | TGATCA | 1 cut(s) | 1813 |
| LguI | GCTCTTC | 4 cut(s) | 338, 475, 634, 960 |
| Lsp1109I | GCAGC | 8 cut(s) | 126, 413, 504, 1008, 1278, 1870, 2360, 2898 |
| LweI | GCATC | 8 cut(s) | 214, 1167, 1223, 1753, 1960, 2190, 3787, 3807 |
| MaeI | CTAG | 6 cut(s) | 255, 276, 498, 1211, 1754, 2525 |
| MaeII | ACGT | 4 cut(s) | 850, 1029, 1105, 3205 |
| MbiI | CCGCTC | 1 cut(s) | 468 |
| MfeI | CAATTG | 3 cut(s) | 1375, 2073, 3354 |
| MflI | RGATCY | 8 cut(s) | 200, 670, 1618, 2125, 2353, 2722, 3056, 3538 |
| MhlI | GDGCHC | 3 cut(s) | 350, 962, 1731 |
| MlyI | GAGTC | 5 cut(s) | 35, 553, 808, 3083, 3524 |
| MmeI | TCCRAC | 7 cut(s) | 1050, 1452, 1561, 1932, 1983, 3099, 3513 |
| Mph1103I | ATGCAT | 1 cut(s) | 1768 |
| MroXI | GAANNNNTTC | 4 cut(s) | 934, 1168, 2289, 3366 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1640 |
| MspA1I | CMGCKG | 2 cut(s) | 1269, 1861 |
| MspI | CCGG | 3 cut(s) | 62, 351, 2101 |
| MspR9I | CCNGG | 5 cut(s) | 352, 1760, 1847, 3383, 3434 |
| MunI | CAATTG | 3 cut(s) | 1375, 2073, 3354 |
| Mva1269I | GAATGC | 2 cut(s) | 643, 3808 |
| MvaI | CCWGG | 4 cut(s) | 1760, 1847, 3383, 3434 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 148, 1735, 2603, 3742 |
| NciI | CCSGG | 1 cut(s) | 352 |
| NdeI | CATATG | 1 cut(s) | 1807 |
| NmeAIII | GCCGAG | 1 cut(s) | 149 |
| NmuCI | GTSAC | 7 cut(s) | 38, 1116, 1177, 1220, 1352, 1829, 3109 |
| NsiI | ATGCAT | 1 cut(s) | 1768 |
| NspI | RCATGY | 5 cut(s) | 627, 1556, 2636, 3110, 3296 |
| OliI | CACNNNNGTG | 1 cut(s) | 1640 |
| PaeI | GCATGC | 1 cut(s) | 3296 |
| PaeR7I | CTCGAG | 1 cut(s) | 3252 |
| PaqCI | CACCTGC | 1 cut(s) | 26 |
| PciI | ACATGT | 1 cut(s) | 2632 |
| PciSI | GCTCTTC | 4 cut(s) | 338, 475, 634, 960 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 847 |
| PctI | GAATGC | 2 cut(s) | 643, 3808 |
| PdmI | GAANNNNTTC | 4 cut(s) | 934, 1168, 2289, 3366 |
| PflFI | GACNNNGTC | 1 cut(s) | 1754 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2025 |
| PfoI | TCCNGGA | 1 cut(s) | 1758 |
| PleI | GAGTC | 5 cut(s) | 35, 553, 808, 3082, 3523 |
| PmaCI | CACGTG | 1 cut(s) | 3206 |
| PmlI | CACGTG | 1 cut(s) | 3206 |
| PpsI | GAGTC | 5 cut(s) | 35, 553, 808, 3082, 3523 |
| Ppu21I | YACGTR | 2 cut(s) | 851, 3206 |
| PscI | ACATGT | 1 cut(s) | 2632 |
| PshBI | ATTAAT | 1 cut(s) | 2151 |
| Psp124BI | GAGCTC | 2 cut(s) | 350, 1731 |
| Psp1406I | AACGTT | 1 cut(s) | 1029 |
| Psp6I | CCWGG | 4 cut(s) | 1758, 1845, 3381, 3432 |
| PspCI | CACGTG | 1 cut(s) | 3206 |
| PspGI | CCWGG | 4 cut(s) | 1758, 1845, 3381, 3432 |
| PspOMI | GGGCCC | 1 cut(s) | 958 |
| PspPI | GGNCC | 6 cut(s) | 958, 959, 1271, 2325, 2617, 3722 |
| PspXI | VCTCGAGB | 1 cut(s) | 3252 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2081, 2113 |
| PstI | CTGCAG | 3 cut(s) | 144, 235, 2350 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1421 |
| PsuI | RGATCY | 8 cut(s) | 200, 670, 1618, 2125, 2353, 2722, 3056, 3538 |
| PsyI | GACNNNGTC | 1 cut(s) | 1754 |
| PvuII | CAGCTG | 1 cut(s) | 1861 |
| RsaI | GTAC | 8 cut(s) | 383, 768, 1547, 1633, 1929, 2482, 2981, 3149 |
| RsaNI | GTAC | 8 cut(s) | 382, 767, 1546, 1632, 1928, 2481, 2980, 3148 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1640 |
| SacI | GAGCTC | 2 cut(s) | 350, 1731 |
| SapI | GCTCTTC | 4 cut(s) | 338, 475, 634, 960 |
| Sau96I | GGNCC | 6 cut(s) | 958, 959, 1271, 2325, 2617, 3722 |
| SchI | GAGTC | 5 cut(s) | 35, 553, 808, 3083, 3524 |
| ScrFI | CCNGG | 5 cut(s) | 352, 1760, 1847, 3383, 3434 |
| SduI | GDGCHC | 3 cut(s) | 350, 962, 1731 |
| SfaNI | GCATC | 8 cut(s) | 214, 1167, 1223, 1753, 1960, 2190, 3787, 3807 |
| SfcI | CTRYAG | 4 cut(s) | 140, 231, 2346, 2964 |
| Sfr274I | CTCGAG | 1 cut(s) | 3252 |
| SinI | GGWCC | 3 cut(s) | 1271, 2325, 2617 |
| SlaI | CTCGAG | 1 cut(s) | 3252 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1640 |
| SmlI | CTYRAG | 5 cut(s) | 638, 776, 1724, 2054, 3252 |
| SmoI | CTYRAG | 5 cut(s) | 638, 776, 1724, 2054, 3252 |
| SpeI | ACTAGT | 1 cut(s) | 497 |
| SphI | GCATGC | 1 cut(s) | 3296 |
| SsiI | CCGC | 6 cut(s) | 208, 466, 1269, 1490, 2161, 3319 |
| SspI | AATATT | 1 cut(s) | 3552 |
| SspMI | CTAG | 6 cut(s) | 255, 276, 498, 1211, 1754, 2525 |
| SstI | GAGCTC | 2 cut(s) | 350, 1731 |
| StyD4I | CCNGG | 5 cut(s) | 350, 1758, 1845, 3381, 3432 |
| StyI | CCWWGG | 1 cut(s) | 2121 |
| TaaI | ACNGT | 9 cut(s) | 540, 766, 1096, 1318, 1706, 1950, 2290, 2668, 3334 |
| TaiI | ACGT | 4 cut(s) | 853, 1032, 1108, 3208 |
| TatI | WGTACW | 3 cut(s) | 381, 1545, 2480 |
| TauI | GCSGC | 2 cut(s) | 211, 2164 |
| TscAI | CASTG | 7 cut(s) | 769, 1255, 1426, 1563, 1642, 1711, 3037 |
| TseFI | GTSAC | 7 cut(s) | 38, 1116, 1177, 1220, 1352, 1829, 3109 |
| TseI | GCWGC | 8 cut(s) | 139, 426, 492, 996, 1266, 1858, 2348, 2886 |
| Tsp45I | GTSAC | 7 cut(s) | 38, 1116, 1177, 1220, 1352, 1829, 3109 |
| TspGWI | ACGGA | 3 cut(s) | 714, 2624, 3640 |
| TspRI | CASTG | 7 cut(s) | 769, 1255, 1426, 1563, 1642, 1711, 3037 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1754 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2025 |
| VpaK11BI | GGWCC | 3 cut(s) | 1271, 2325, 2617 |
| VspI | ATTAAT | 1 cut(s) | 2151 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1757 |
| XapI | RAATTY | 4 cut(s) | 320, 1776, 2467, 2869 |
| XceI | RCATGY | 5 cut(s) | 627, 1556, 2636, 3110, 3296 |
| XhoI | CTCGAG | 1 cut(s) | 3252 |
| XmnI | GAANNNNTTC | 4 cut(s) | 934, 1168, 2289, 3366 |
| XspI | CTAG | 6 cut(s) | 255, 276, 498, 1211, 1754, 2525 |
| Zsp2I | ATGCAT | 1 cut(s) | 1768 |