Rw2G025160

Plant calmodulin-binding domain

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
37429620 .. 37434565
4946 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G025160.1

Sequence Viewer

Length: 3909 bp
ATGACTTCTAAGGAGGAGCTTGCAGTTGGGGAGGCAGGGGAATCAGATAATAGCCAAATGCCGGAGCAGTTTCCGATGACGTCTACTGAATCATATGTTCTCCAGAACCAGAATGGCAGAAGCCGAGGAGAACCAGAGCTGCAGAAGAAGCTGAACAAGTTGAGATCAATCAAGCTCGGAAAATCGCCTTCGAGAAAAAGATCTAAGCGCAGATCGAATGATGCAACTGCAGATGATCCACAGAGTTCAGCTAGAGTATTGGTAAGGAGGTCTAGTTTTAAGCCTGTAAACAATTTAACAAGAATGTCAAGCGTAAAATTCAAGAACCCTTTGGTGAGGAAGAGCTCCGGAGGAACCCAACTGAATCACCTGAACAAGTACAGATCATCATCATCATCACCAAACTTTTTGAAGGAGACCTGCTGCTCCATTGAGAAAAGGACGCAGTTTCAGGGCAGTCCCCGCTTTTCTTCGGAATCAAGTTATTGCAGCACTAGTAATTCAACGCCAAACTCTGCTCACAAGTCAGGAAGACTGTCCAGAACAAAATCCAAGACTCGTGTGCTTCGGAACAGGTCTGGAATGTCTGAATCTCCAGACTTGGGGGTGCAAAGAGCTACATGCTCTTCGGCTCTCAAGCATTCCAAGTCCCCTCCTGAGGTGAAGGATCTTCATGCAGAAGGAAGTGAATCTGAAGGAGCTTCAGCCACCATGCCTTGTCCATTCACTTATTGTTCTCTTCATGGTCATCGCCACGCCACTGTACCTCCACTCAAGAGCCTCATTTCGATAAGGAGGCGCTTGTTGAAGACTCAGAATGGACTGAAACAGACAACTCGATCCCCACGTAGAGCGAAAAAGTCTGGCAAAATTAAGGAAGATGAGATGAATCAAATGGTCAGCATTGGAGACGACGAAGTTCATGGCACAACTTCTGTTTTGGTGGAAAAATTGGGCCCAGAAGAGCTTTTACAAGTCCTTGATGAAACTTGCAGCAAAGATAAAGACAACTATGATCTTTCCAACGTTTCCAAGAAGCTGTTTGGTGAAGCTTCGGAGGAGAGTGTGCAAGAAACAAGTGATCTTGCCACAGTAGAACAACATGCTTTGGTGTCACCCTCATCACTTGGTGATTTATGTCCAGAAGGTTGTTGCATCGGAACAGCTTCCGAAGTCACCAATACAGACATAAAAGAAGAGAAATGTCTAGCATCTTGTCACAATGAAGGTGTTGATATCACTTGCACTGATAAATCGAACAGCAGCAGTCCTAAATCAATTCCAGAAGATGTGGAATCTGTTGTTTGCACTACTGTCAAACTCCCTGATGAAGTTGTGGAATCAACAAGTGACAATGAAAGCCATGAAAACAATTGTGCTTCTGGTTGTGAGCCACCCGAGGAACAAACAGCCATTGAGCAAAAATATGGAAGTTTGGTGACAGACAAAAGTGGTAGTGTGGAGTTGGACAAAAATGAAGGTGCGGAGTGTGGTATGCAGGCGAAAAATCACAAGTATATCACTATGTGGAAGTTGATGTACAAACATGCAGTGAAGGGTAACACAGCAGATGTTGGAAACCCTCTCCCTCTTCATGGAGATCCAGTAGAAGGTACCACTGGCGTGCTTGAAACTGACAATTCATCATTTCCTGAAACAGATGAGCATACAGCTTCGACAAATCACAGTGCAGGAGACCAAGAACTTGAGCTCTGTCAGCAAAATGCCATTGACCTAGTCCAGGATGCATTTGATAAAATTCTTCTCCCAGAAGTTCAGGACAGCTCATATGATGATCAATCAGTTACTAGTGACATAAACTCAGACCAGGAAGGATTGCAGCTGAGGAAGGATGAAGGAGGGAAGCATAGAACCTTAACTTCTGGTGATTCTTCAGAGGACAGAATGGTACAGAATCCAGAAGAAACACAGTCGGAAGCTGAAAACAGCAATGCTCCCAAAGAGAAAGTAGTGGAAGACAAGTTGGAACAGAACACGCCCAAGCGCTGGAGCAGTCTGAAAAAGTTTATTCTTCTCAAGAGATTTGTCAAGGCAATTGAAAAGGTGAGGAAGCTCAGTTACCGGAAGCCACATTACCTACCCTTGGATCCTGACCCAGAGGCAGAAAAAATTATTCTACGGCGGCAGGAAATTGATGACAAAAAGAGTGCTGATGAATGGATGCTTGATTACGCACTTCAAAAGGTGATATCTAAGCTACCTCCAGCTCAACAAAGAAGAGTGGCATTACTTGTAGAAGCTTTTGAAACAGTTCTCCCTTTCCCTGATATTAGACCTGACCAGAGGTCCAAATCAATAGATTCGACTGCAGCAGATCTTCAAGCCTGCAATGGCTTGCCAGTTCAAAATGCTGATGAAACTGGTAAAGAGAGTGATTCTGGAACTTCTGCCAAAATCTTGTTTGGGAGTATGTCATGTCCTGAAGAAAATTTAAGTAAGTGTACAGATAAGTTCATTGATGTTAAAATGGATCAACAGCGAAGTCCAGTTAAATCTCTTATGCTCAATGAATCAAGTGCAGAAGACTGTTCCACTAAAACAGAAGTCGATATACCTGCTTTTGGAGCCACGGATGAGGACCAGCTGGGGACACATGTTTATATCAAGAATGGTGATGGGGAGGAGACAGTCTTTTCCATTGACCATACCGAGTTTCCCAATGTTTCTTCATCAGAAAGTAAAGATCCCCAGTTCTGTAAAGAAACCTCTTTGAAGCAAGAGGAAGATGGTAGCACCAGTTATGCAGTTCTCGAAAACGAAAAAGTGCAAGAGACCCCAACAGAACATACTTCACATATTTCTGTCAGTAGTTTGGATCGTGGAAATGTGAATTCCGATGTGGAAAGCAGCAATGGTGCAGAATCAGATTTGTGTGAGAAAACGGGGGTCTCTTTAGCTCCCATAAGGTGCCCTGAGGTGCCAATGGTAGCAACAGAAGGATCAAATGGAGGAGGAACCAGTGCAAAATCTGGATTCTTTCAAGGATCCTCTCCACCTGAAGAGTCTCATTCGGAGAGCAATGCTGATGTAACGCATGTCACTCAGTTGGAAAAACAGAACTACACAAGGCTATGGTACTTTGTATATAAGCACATGGTATCAAGCATTGCTGAAAAAGATGGAGATGAAGCACATGATGGTGCAGATGAGGAACAAGGAATTGACACCAACACATTGCCTCGAGCAGAGGTGGATCGAGAGCTGAGCTTGACAAATCAGCATGCAGACAACAAAAAGAATGAACTCCGCCGTATTGAAACTGTCAAAATGGTGGAGAAAGCAATTGATGAAATACTTCTTCCAGAAAACCAGGATGAATCAGAAGACGATCAATCAAACAACAGAGACTTAATTTCAGACCAGGAACCACCAGAAAATAAAGTTGGCATAGAAGGAAAATCTTTCGCAACTTTTTCCAACTTTGCCAAAGATAGCTTCAGAGAGTCCAAAAAGAAAGCAGGGGAAGATCCAAAACAAATATTGCTCAAATCTGATAATGCTGTCATTGAGGATGTAGAGAAGGAAGTGCTGATGGTAGAAGAGAAACCTAAACAGAAAATGTCAAAGAACTGGAGAAATCTGAAGAAAATGATTCTGCTAAATAGGTTTATCAAGGCATTAGAGAAAGGAAAGAAGTCCAACCCACGAGGGCCAAAATATCTGCTCTTGGAGCCTGACCCCGAAGCAGAAAAAGTTAATCTAAAGCATCAAAACATGGATGAGAGGAAGAATGCTGAGGAGTGGATGCTTGATTATGCACTTCAAAAGGCTGTTGCTAAATTAACTCCAGCTCGGAATAGAAAAGTAGCACTGCTTGTTGAGGCTTTTGAAACAGTTATTCCAAATAATGGAATCCCAAACCCGTTCAAGCCAGAAGTCATTTGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1302

Amino Acids

144.23

Weight (kDa)

5.24

Isoelectric Point (pI)

53.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CaM_binding PF07839 660 - 760 3.6e-29 Plant calmodulin-binding domain
CaM_binding PF07839 1187 - 1288 6.5e-32 Plant calmodulin-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 83
Acc36I ACCTGC 2 cut(s) 428, 2584
Acc65I GGTACC 1 cut(s) 1613
AccB1I GGYRCC 3 cut(s) 1613, 2928, 2938
AccB7I CCANNNNNTGG 2 cut(s) 2007, 3869
AccI GTMKAC 1 cut(s) 83
AccIII TCCGGA 1 cut(s) 347
AciI CCGC 4 cut(s) 463, 1484, 2143, 3268
AclI AACGTT 1 cut(s) 1026
AcsI RAATTY 4 cut(s) 317, 1758, 2449, 2851
AcuI CTGAAG 7 cut(s) 687, 714, 1878, 2463, 3039, 3442, 3623
AcyI GRCGYC 1 cut(s) 80
AdeI CACNNNGTG 2 cut(s) 1130, 1527
AfaI GTAC 7 cut(s) 380, 765, 1541, 1615, 1911, 2464, 3098
AfeI AGCGCT 1 cut(s) 2006
AflIII ACRYGT 1 cut(s) 2614
AhdI GACNNNNNGTC 1 cut(s) 2305
AhlI ACTAGT 2 cut(s) 494, 1808
AjnI CCWGG 4 cut(s) 1740, 1827, 3330, 3381
AjuI GAANNNNNNNTTGG 4 cut(s) 3387, 3419, 3440, 3472
AleI CACNNNNGTG 1 cut(s) 1622
Alw21I GWGCWC 2 cut(s) 347, 1713
Alw26I GTCTC 8 cut(s) 410, 903, 1689, 2639, 2786, 2914, 3030, 3360
Ama87I CYCGRG 2 cut(s) 1397, 3201
Aor13HI TCCGGA 1 cut(s) 347
Aor51HI AGCGCT 1 cut(s) 2006
AoxI GGCC 2 cut(s) 955, 3671
ApaI GGGCCC 1 cut(s) 959
ApeKI GCWGC 8 cut(s) 139, 423, 489, 993, 1263, 1840, 2330, 2868
ApoI RAATTY 4 cut(s) 317, 1758, 2449, 2851
Asp700I GAANNNNTTC 3 cut(s) 1165, 2271, 3315
Asp718I GGTACC 1 cut(s) 1613
AspLEI GCGC 3 cut(s) 210, 801, 2007
AspS9I GGNCC 5 cut(s) 955, 956, 2307, 2599, 3671
AvaI CYCGRG 2 cut(s) 1397, 3201
AvaII GGWCC 2 cut(s) 2307, 2599
AxyI CCTNAGG 2 cut(s) 657, 2934
BaeGI GKGCMC 2 cut(s) 959, 2933
BamHI GGATCC 2 cut(s) 2107, 3005
BanI GGYRCC 3 cut(s) 1613, 2928, 2938
BanII GRGCYC 3 cut(s) 347, 959, 1713
BauI CACGAG 2 cut(s) 558, 3666
BbsI GAAGAC 5 cut(s) 538, 815, 1983, 2550, 3351
Bbv12I GWGCWC 2 cut(s) 347, 1713
BbvCI CCTCAGC 2 cut(s) 1844, 3756
BbvI GCAGC 8 cut(s) 126, 410, 501, 1005, 1275, 1852, 2342, 2880
BccI CCATC 5 cut(s) 2630, 2741, 3134, 3152, 3547
BceAI ACGGC 2 cut(s) 2156, 3255
BcgI CGANNNNNNTGC 2 cut(s) 2558, 2592
BciT130I CCWGG 4 cut(s) 1742, 1829, 3332, 3383
BclI TGATCA 1 cut(s) 1795
BcoDI GTCTC 8 cut(s) 410, 903, 1689, 2639, 2786, 2914, 3030, 3360
BcuI ACTAGT 2 cut(s) 494, 1808
BfaI CTAG 6 cut(s) 252, 273, 495, 1208, 1736, 1809
BfmI CTRYAG 3 cut(s) 140, 228, 2328
BfoI RGCGCY 2 cut(s) 802, 2008
BfuAI ACCTGC 2 cut(s) 428, 2584
BglII AGATCT 2 cut(s) 200, 2335
BisI GCNGC 9 cut(s) 140, 424, 490, 994, 1264, 1841, 2144, 2331, 2869
BlpI GCTNAGC 1 cut(s) 3224
BlsI GCNGC 9 cut(s) 141, 425, 491, 995, 1265, 1842, 2145, 2332, 2870
Bme1390I CCNGG 4 cut(s) 1742, 1829, 3332, 3383
Bme18I GGWCC 2 cut(s) 2307, 2599
BmeRI GACNNNNNGTC 1 cut(s) 2305
BmeT110I CYCGRG 2 cut(s) 1397, 3201
BmgT120I GGNCC 5 cut(s) 955, 956, 2307, 2599, 3671
BmrFI CCNGG 4 cut(s) 1742, 1829, 3332, 3383
BmrI ACTGGG 1 cut(s) 2704
BmsI GCATC 7 cut(s) 211, 1164, 1220, 1735, 2172, 3736, 3756
BmuI ACTGGG 1 cut(s) 2704
BpiI GAAGAC 5 cut(s) 538, 815, 1983, 2550, 3351
BpmI CTGGAG 6 cut(s) 86, 579, 2029, 2208, 3613, 3792
Bpu10I CCTNAGC 2 cut(s) 1844, 3756
Bpu1102I GCTNAGC 1 cut(s) 3224
BpuEI CTTGAG 4 cut(s) 620, 758, 1727, 2021
BsaAI YACGTR 1 cut(s) 848
BsaBI GATNNNNATC 1 cut(s) 388
BsaHI GRCGYC 1 cut(s) 80
BsaI GGTCTC 4 cut(s) 410, 1689, 2786, 2914
BsaJI CCNNGG 4 cut(s) 124, 1398, 2103, 2589
BsaWI WCCGGW 2 cut(s) 347, 2082
BsaXI ACNNNNNCTCC 6 cut(s) 259, 289, 751, 781, 1590, 1620
Bse1I ACTGG 9 cut(s) 1604, 1624, 2360, 2386, 2507, 2710, 2757, 2979, 3596
Bse21I CCTNAGG 2 cut(s) 657, 2934
Bse3DI GCAATG 6 cut(s) 1957, 2356, 2878, 3046, 3126, 3194
Bse8I GATNNNNATC 1 cut(s) 388
BseAI TCCGGA 1 cut(s) 347
BseBI CCWGG 4 cut(s) 1742, 1829, 3332, 3383
BseDI CCNNGG 4 cut(s) 124, 1398, 2103, 2589
BseGI GGATG 8 cut(s) 1750, 1858, 2187, 2599, 3340, 3538, 3745, 3771
BseJI GATNNNNATC 1 cut(s) 388
BseMI GCAATG 6 cut(s) 1957, 2356, 2878, 3046, 3126, 3194
BseMII CTCAG 9 cut(s) 648, 827, 1835, 1836, 2089, 2925, 3077, 3215, 3747
BseNI ACTGG 9 cut(s) 1604, 1624, 2360, 2386, 2507, 2710, 2757, 2979, 3596
BseRI GAGGAG 6 cut(s) 29, 141, 1073, 2657, 2985, 3773
BseSI GKGCMC 2 cut(s) 959, 2933
BseXI GCAGC 8 cut(s) 126, 410, 501, 1005, 1275, 1852, 2342, 2880
BseYI CCCAGC 1 cut(s) 2605
BsgI GTGCAG 4 cut(s) 1710, 2559, 2898, 3183
BshFI GGCC 2 cut(s) 957, 3673
BshNI GGYRCC 3 cut(s) 1613, 2928, 2938
BsiHKAI GWGCWC 2 cut(s) 347, 1713
BsiHKCI CYCGRG 2 cut(s) 1397, 3201
BsiSI CCGG 3 cut(s) 62, 348, 2083
BslFI GGGAC 3 cut(s) 444, 634, 2623
BsmAI GTCTC 8 cut(s) 410, 903, 1689, 2639, 2786, 2914, 3030, 3360
BsmBI CGTCTC 1 cut(s) 903
BsmFI GGGAC 3 cut(s) 444, 634, 2623
BsmI GAATGC 2 cut(s) 640, 3757
BsnI GGCC 2 cut(s) 957, 3673
Bso31I GGTCTC 4 cut(s) 410, 1689, 2786, 2914
BsoBI CYCGRG 2 cut(s) 1397, 3201
Bsp120I GGGCCC 1 cut(s) 955
Bsp1286I GDGCHC 4 cut(s) 347, 959, 1713, 2933
Bsp13I TCCGGA 1 cut(s) 347
Bsp1407I TGTACA 2 cut(s) 1539, 2462
Bsp1720I GCTNAGC 1 cut(s) 3224
BspACI CCGC 4 cut(s) 463, 1484, 2143, 3268
BspANI GGCC 2 cut(s) 957, 3673
BspCNI CTCAG 9 cut(s) 649, 826, 1835, 1836, 2088, 2926, 3076, 3216, 3748
BspEI TCCGGA 1 cut(s) 347
BspMAI CTGCAG 3 cut(s) 144, 232, 2332
BspMI ACCTGC 2 cut(s) 428, 2584
BspQI GCTCTTC 3 cut(s) 335, 631, 957
BspT107I GGYRCC 3 cut(s) 1613, 2928, 2938
BspTNI GGTCTC 4 cut(s) 410, 1689, 2786, 2914
BsrDI GCAATG 6 cut(s) 1957, 2356, 2878, 3046, 3126, 3194
BsrGI TGTACA 2 cut(s) 1539, 2462
BsrI ACTGG 9 cut(s) 1604, 1624, 2360, 2386, 2507, 2710, 2757, 2979, 3596
BssECI CCNNGG 4 cut(s) 124, 1398, 2103, 2589
BssNI GRCGYC 1 cut(s) 80
BssSI CACGAG 2 cut(s) 558, 3666
BssT1I CCWWGG 1 cut(s) 2103
Bst2BI CACGAG 2 cut(s) 558, 3666
Bst2UI CCWGG 4 cut(s) 1742, 1829, 3332, 3383
Bst6I CTCTTC 9 cut(s) 335, 631, 744, 957, 1191, 1596, 2233, 3015, 3555
BstACI GRCGYC 1 cut(s) 80
BstAUI TGTACA 2 cut(s) 1539, 2462
BstBAI YACGTR 1 cut(s) 848
BstC8I GCNNGC 6 cut(s) 21, 1500, 1625, 2347, 2357, 3243
BstDSI CCRYGG 1 cut(s) 2589
BstENI CCTNNNNNAGG 1 cut(s) 1739
BstF5I GGATG 8 cut(s) 1750, 1858, 2187, 2599, 3340, 3538, 3745, 3771
BstH2I RGCGCY 2 cut(s) 802, 2008
BstHHI GCGC 3 cut(s) 210, 801, 2007
BstMAI GTCTC 8 cut(s) 410, 903, 1689, 2639, 2786, 2914, 3030, 3360
BstMWI GCNNNNNNNGC 5 cut(s) 148, 462, 1717, 2585, 3691
BstNI CCWGG 4 cut(s) 1742, 1829, 3332, 3383
BstNSI RCATGY 6 cut(s) 624, 1106, 1550, 2618, 3059, 3245
BstSCI CCNGG 4 cut(s) 1740, 1827, 3330, 3381
BstSFI CTRYAG 3 cut(s) 140, 228, 2328
BstSLI GKGCMC 2 cut(s) 959, 2933
BstV1I GCAGC 8 cut(s) 126, 410, 501, 1005, 1275, 1852, 2342, 2880
BstV2I GAAGAC 5 cut(s) 538, 815, 1983, 2550, 3351
BstX2I RGATCY 8 cut(s) 200, 667, 1600, 2107, 2335, 2704, 3005, 3487
BstYI RGATCY 8 cut(s) 200, 667, 1600, 2107, 2335, 2704, 3005, 3487
Bsu36I CCTNAGG 2 cut(s) 657, 2934
BsuRI GGCC 2 cut(s) 957, 3673
BtgI CCRYGG 1 cut(s) 2589
BtgZI GCGATG 1 cut(s) 734
BtsCI GGATG 8 cut(s) 1750, 1858, 2187, 2599, 3340, 3538, 3745, 3771
BtsI GCAGTG 2 cut(s) 1557, 3830
BtsIMutI CAGTG 7 cut(s) 759, 1245, 1557, 1617, 1693, 2986, 3830
BveI ACCTGC 2 cut(s) 428, 2584
Cac8I GCNNGC 6 cut(s) 21, 1500, 1625, 2347, 2357, 3243
CfoI GCGC 3 cut(s) 210, 801, 2007
Cfr13I GGNCC 5 cut(s) 955, 956, 2307, 2599, 3671
CseI GACGC 1 cut(s) 451
Csp6I GTAC 7 cut(s) 379, 764, 1540, 1614, 1910, 2463, 3097
CviQI GTAC 7 cut(s) 379, 764, 1540, 1614, 1910, 2463, 3097
DraIII CACNNNGTG 2 cut(s) 1130, 1527
DriI GACNNNNNGTC 1 cut(s) 2305
Eam1104I CTCTTC 9 cut(s) 335, 631, 744, 957, 1191, 1596, 2233, 3015, 3555
Eam1105I GACNNNNNGTC 1 cut(s) 2305
EarI CTCTTC 9 cut(s) 335, 631, 744, 957, 1191, 1596, 2233, 3015, 3555
EciI GGCGGA 1 cut(s) 3257
Ecl136II GAGCTC 2 cut(s) 345, 1711
Eco130I CCWWGG 1 cut(s) 2103
Eco24I GRGCYC 3 cut(s) 347, 959, 1713
Eco31I GGTCTC 4 cut(s) 410, 1689, 2786, 2914
Eco32I GATATC 2 cut(s) 1237, 2211
Eco47I GGWCC 2 cut(s) 2307, 2599
Eco47III AGCGCT 1 cut(s) 2006
Eco53kI GAGCTC 2 cut(s) 345, 1711
Eco57I CTGAAG 7 cut(s) 687, 714, 1878, 2463, 3039, 3442, 3623
Eco81I CCTNAGG 2 cut(s) 657, 2934
Eco88I CYCGRG 2 cut(s) 1397, 3201
EcoICRI GAGCTC 2 cut(s) 345, 1711
EcoNI CCTNNNNNAGG 1 cut(s) 1739
EcoRI GAATTC 1 cut(s) 2851
EcoRII CCWGG 4 cut(s) 1740, 1827, 3330, 3381
EcoRV GATATC 2 cut(s) 1237, 2211
EcoT14I CCWWGG 1 cut(s) 2103
EcoT22I ATGCAT 1 cut(s) 1750
EcoT38I GRGCYC 3 cut(s) 347, 959, 1713
ErhI CCWWGG 1 cut(s) 2103
Esp3I CGTCTC 1 cut(s) 903
FaqI GGGAC 3 cut(s) 444, 634, 2623
FauI CCCGC 1 cut(s) 470
FauNDI CATATG 2 cut(s) 94, 1789
FbaI TGATCA 1 cut(s) 1795
FblI GTMKAC 1 cut(s) 83
Fnu4HI GCNGC 9 cut(s) 140, 424, 490, 994, 1264, 1841, 2144, 2331, 2869
FokI GGATG 8 cut(s) 1757, 1865, 2194, 2606, 3347, 3545, 3752, 3778
FriOI GRGCYC 3 cut(s) 347, 959, 1713
Fsp4HI GCNGC 9 cut(s) 140, 424, 490, 994, 1264, 1841, 2144, 2331, 2869
FspBI CTAG 6 cut(s) 252, 273, 495, 1208, 1736, 1809
GlaI GCGC 3 cut(s) 209, 800, 2006
GluI GCNGC 9 cut(s) 140, 424, 490, 994, 1264, 1841, 2144, 2331, 2869
GsaI CCCAGC 1 cut(s) 2609
GsuI CTGGAG 6 cut(s) 86, 579, 2029, 2208, 3613, 3792
HaeII RGCGCY 2 cut(s) 802, 2008
HaeIII GGCC 2 cut(s) 957, 3673
HapII CCGG 3 cut(s) 62, 348, 2083
HgaI GACGC 1 cut(s) 451
HhaI GCGC 3 cut(s) 210, 801, 2007
Hin1I GRCGYC 1 cut(s) 80
Hin6I GCGC 3 cut(s) 208, 799, 2005
HinP1I GCGC 3 cut(s) 208, 799, 2005
HindIII AAGCTT 2 cut(s) 1050, 2259
HpaII CCGG 3 cut(s) 62, 348, 2083
Hpy166II GTNNAC 3 cut(s) 84, 289, 2463
Hpy8I GTNNAC 3 cut(s) 84, 289, 2463
Hpy99I CGWCG 1 cut(s) 917
HpyCH4IV ACGT 3 cut(s) 80, 847, 1026
HpyF10VI GCNNNNNNNGC 5 cut(s) 148, 462, 1717, 2585, 3691
HpySE526I ACGT 3 cut(s) 80, 847, 1026
Hsp92I GRCGYC 1 cut(s) 80
HspAI GCGC 3 cut(s) 208, 799, 2005
Kpn2I TCCGGA 1 cut(s) 347
KpnI GGTACC 1 cut(s) 1617
Ksp22I TGATCA 1 cut(s) 1795
LguI GCTCTTC 3 cut(s) 335, 631, 957
Lsp1109I GCAGC 8 cut(s) 126, 410, 501, 1005, 1275, 1852, 2342, 2880
LweI GCATC 7 cut(s) 211, 1164, 1220, 1735, 2172, 3736, 3756
MaeI CTAG 6 cut(s) 252, 273, 495, 1208, 1736, 1809
MaeII ACGT 3 cut(s) 80, 847, 1026
MfeI CAATTG 3 cut(s) 1372, 2055, 3303
MflI RGATCY 8 cut(s) 200, 667, 1600, 2107, 2335, 2704, 3005, 3487
MhlI GDGCHC 4 cut(s) 347, 959, 1713, 2933
MlyI GAGTC 4 cut(s) 550, 805, 3032, 3473
MmeI TCCRAC 8 cut(s) 1047, 1446, 1555, 1914, 1965, 3048, 3462, 3684
Mph1103I ATGCAT 1 cut(s) 1750
MroI TCCGGA 1 cut(s) 347
MroXI GAANNNNTTC 3 cut(s) 1165, 2271, 3315
MslI CAYNNNNRTG 2 cut(s) 1622, 3159
MspA1I CMGCKG 2 cut(s) 1843, 2605
MspI CCGG 3 cut(s) 62, 348, 2083
MspR9I CCNGG 4 cut(s) 1742, 1829, 3332, 3383
MunI CAATTG 3 cut(s) 1372, 2055, 3303
Mva1269I GAATGC 2 cut(s) 640, 3757
MvaI CCWGG 4 cut(s) 1742, 1829, 3332, 3383
MwoI GCNNNNNNNGC 5 cut(s) 148, 462, 1717, 2585, 3691
NdeI CATATG 2 cut(s) 94, 1789
NmeAIII GCCGAG 1 cut(s) 149
NmuCI GTSAC 7 cut(s) 1113, 1174, 1217, 1349, 1438, 1811, 3058
NsiI ATGCAT 1 cut(s) 1750
NspI RCATGY 6 cut(s) 624, 1106, 1550, 2618, 3059, 3245
OliI CACNNNNGTG 1 cut(s) 1622
PaeI GCATGC 1 cut(s) 3245
PaeR7I CTCGAG 1 cut(s) 3201
PciI ACATGT 1 cut(s) 2614
PciSI GCTCTTC 3 cut(s) 335, 631, 957
PcsI WCGNNNNNNNCGW 1 cut(s) 844
PctI GAATGC 2 cut(s) 640, 3757
PdmI GAANNNNTTC 3 cut(s) 1165, 2271, 3315
PflFI GACNNNGTC 1 cut(s) 1736
PflMI CCANNNNNTGG 2 cut(s) 2007, 3869
PfoI TCCNGGA 1 cut(s) 1740
PkrI GCNGC 9 cut(s) 141, 425, 491, 995, 1265, 1842, 2145, 2332, 2870
PleI GAGTC 4 cut(s) 550, 805, 3031, 3472
PpsI GAGTC 4 cut(s) 550, 805, 3031, 3472
Ppu21I YACGTR 1 cut(s) 848
PscI ACATGT 1 cut(s) 2614
Psp124BI GAGCTC 2 cut(s) 347, 1713
Psp1406I AACGTT 1 cut(s) 1026
Psp6I CCWGG 4 cut(s) 1740, 1827, 3330, 3381
PspFI CCCAGC 1 cut(s) 2605
PspGI CCWGG 4 cut(s) 1740, 1827, 3330, 3381
PspOMI GGGCCC 1 cut(s) 955
PspPI GGNCC 5 cut(s) 955, 956, 2307, 2599, 3671
PspXI VCTCGAGB 1 cut(s) 3201
PstI CTGCAG 3 cut(s) 144, 232, 2332
PsuI RGATCY 8 cut(s) 200, 667, 1600, 2107, 2335, 2704, 3005, 3487
PsyI GACNNNGTC 1 cut(s) 1736
PvuII CAGCTG 2 cut(s) 1843, 2605
RsaI GTAC 7 cut(s) 380, 765, 1541, 1615, 1911, 2464, 3098
RsaNI GTAC 7 cut(s) 379, 764, 1540, 1614, 1910, 2463, 3097
RseI CAYNNNNRTG 2 cut(s) 1622, 3159
SacI GAGCTC 2 cut(s) 347, 1713
SapI GCTCTTC 3 cut(s) 335, 631, 957
SatI GCNGC 9 cut(s) 140, 424, 490, 994, 1264, 1841, 2144, 2331, 2869
Sau96I GGNCC 5 cut(s) 955, 956, 2307, 2599, 3671
SchI GAGTC 4 cut(s) 550, 805, 3032, 3473
ScrFI CCNGG 4 cut(s) 1742, 1829, 3332, 3383
SduI GDGCHC 4 cut(s) 347, 959, 1713, 2933
SfaNI GCATC 7 cut(s) 211, 1164, 1220, 1735, 2172, 3736, 3756
SfcI CTRYAG 3 cut(s) 140, 228, 2328
Sfr274I CTCGAG 1 cut(s) 3201
SinI GGWCC 2 cut(s) 2307, 2599
SlaI CTCGAG 1 cut(s) 3201
SmiMI CAYNNNNRTG 2 cut(s) 1622, 3159
SmlI CTYRAG 5 cut(s) 635, 773, 1706, 2036, 3201
SmoI CTYRAG 5 cut(s) 635, 773, 1706, 2036, 3201
SpeI ACTAGT 2 cut(s) 494, 1808
SphI GCATGC 1 cut(s) 3245
SsiI CCGC 4 cut(s) 463, 1484, 2143, 3268
SspI AATATT 1 cut(s) 3501
SspMI CTAG 6 cut(s) 252, 273, 495, 1208, 1736, 1809
SstI GAGCTC 2 cut(s) 347, 1713
StyD4I CCNGG 4 cut(s) 1740, 1827, 3330, 3381
StyI CCWWGG 1 cut(s) 2103
TaiI ACGT 3 cut(s) 83, 850, 1029
TatI WGTACW 3 cut(s) 378, 1539, 2462
TauI GCSGC 1 cut(s) 2146
TscAI CASTG 7 cut(s) 766, 1252, 1557, 1624, 1693, 2986, 3837
TseFI GTSAC 7 cut(s) 1113, 1174, 1217, 1349, 1438, 1811, 3058
TseI GCWGC 8 cut(s) 139, 423, 489, 993, 1263, 1840, 2330, 2868
Tsp45I GTSAC 7 cut(s) 1113, 1174, 1217, 1349, 1438, 1811, 3058
TspGWI ACGGA 1 cut(s) 2606
TspRI CASTG 7 cut(s) 766, 1252, 1557, 1624, 1693, 2986, 3837
Tth111I GACNNNGTC 1 cut(s) 1736
Van91I CCANNNNNTGG 2 cut(s) 2007, 3869
VpaK11BI GGWCC 2 cut(s) 2307, 2599
XagI CCTNNNNNAGG 1 cut(s) 1739
XapI RAATTY 4 cut(s) 317, 1758, 2449, 2851
XceI RCATGY 6 cut(s) 624, 1106, 1550, 2618, 3059, 3245
XcmI CCANNNNNNNNNTGG 1 cut(s) 110
XhoI CTCGAG 1 cut(s) 3201
XmiI GTMKAC 1 cut(s) 83
XmnI GAANNNNTTC 3 cut(s) 1165, 2271, 3315
XspI CTAG 6 cut(s) 252, 273, 495, 1208, 1736, 1809
ZraI GACGTC 1 cut(s) 81
Zsp2I ATGCAT 1 cut(s) 1750
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.