RLG00000022411

Enoyl-(Acyl carrier protein) reductase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0012770
Physical Location & Seq
Forward (+)
83166912 .. 83168794
1883 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022411

Sequence Viewer

Length: 954 bp
ATGCTCAGATCATTTGCCATCAGCAGATTCAAAGAGGCAGCTGGAGCAGCTAGAGGGCTCAAGTACTACGGCAACATCAGCTGCAATCATGTTGTCTGTAAGCGAACGAGACCTTATTCAACCGCTGGCCGTAGTGGAAATGGAAGGCTGGAAGGTAAGGTAGCCTTACTAACAGGTTCTGCAAGTGGGCTCGGGAAGGCAGCGGCCCACGAATTCATCCAAAATGGGGCGCATGTCATGATTGCAGACACTGATTGTGAGCTGGGCCAACAAGTAGCCAAAGAGCTGGGCCCAACAGCCCACTTTGTGGAATGCGACGTTGCTGTTGAGTCACAAGTAGCACAAGCTGTAGAAACCACCGTGGAAAGGTACGGAAAGCTCGACATAATGTACAACAATGCTGGAATAACCGGGCCGACAATCCCACCCAGCATTGCCGACCTCGATCTCGATGAGTTTGACCGTGTCATGCGGATCAACGTGAGGGGAACAATTGCCGGGATAAAGCATGCGGCCCGAGTGATGATCCCATTGGGCTCGGGGTCCATACTGTGCACATCTAGCATTACTGGGCTCCTGGGTGGGCTTGGGCCGCATCCTTACTCGATTTCGAAGTTTACAATGCCAGGCATAGTGAAGTCTGTGGCAAGCGAGCTGTGCCGAAGTGGGGTTCGAATCAATTGCATTTCACCGGCTCCAATTCCAACGCCTCTTGTGGTTAGGGAGATAAGTCGGTTTTATCCAGGGGCAACGGAGGAGCAGATTATAGAGATAGTGAATGGTGTGGGACAACTTAAGGGTGCAAAGGCGGAGGCAGTAGATGTAGCCAAGGCAGCGCTCTATTTAGCCTCTGATGAAGCAAAGTATATAACAGGTCATAATCTAGTCGTCGATGGAGGCTTCACCTGCTTTAAAACTCTTAGCTTTCCTCATCCTGATCAAGTACTTGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
adh_short_C2

Protein Analysis

318

Amino Acids

33.53

Weight (kDa)

8.08

Isoelectric Point (pI)

26.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 53 - 239 4.6e-46 short chain dehydrogenase
KR PF08659 55 - 211 2e-09 KR domain
adh_short_C2 PF13561 59 - 302 2.5e-57 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 914
Acc36I ACCTGC 1 cut(s) 914
AccB7I CCANNNNNTGG 1 cut(s) 307
AciI CCGC 6 cut(s) 123, 203, 472, 512, 593, 809
AclWI GGATC 2 cut(s) 482, 520
AcoI YGGCCR 1 cut(s) 127
AcsI RAATTY 1 cut(s) 212
AdeI CACNNNGTG 1 cut(s) 307
AfaI GTAC 4 cut(s) 65, 371, 392, 945
AfeI AGCGCT 1 cut(s) 837
AfiI CCNNNNNNNGG 4 cut(s) 226, 307, 366, 667
AflII CTTAAG 1 cut(s) 794
AgsI TTSAA 2 cut(s) 31, 120
AjnI CCWGG 3 cut(s) 576, 625, 742
AluBI AGCT 9 cut(s) 41, 50, 81, 262, 286, 347, 379, 655, 924
AluI AGCT 9 cut(s) 41, 50, 81, 262, 286, 347, 379, 655, 924
Alw21I GWGCWC 1 cut(s) 557
Alw26I GTCTC 1 cut(s) 103
Alw44I GTGCAC 1 cut(s) 553
AlwI GGATC 2 cut(s) 482, 520
AlwNI CAGNNNCTG 2 cut(s) 179, 251
Ama87I CYCGRG 3 cut(s) 191, 516, 538
Aor51HI AGCGCT 1 cut(s) 837
AoxI GGCC 7 cut(s) 127, 204, 265, 289, 413, 513, 590
ApaI GGGCCC 1 cut(s) 293
ApaLI GTGCAC 1 cut(s) 553
ApeKI GCWGC 5 cut(s) 38, 47, 81, 200, 833
ApoI RAATTY 1 cut(s) 212
AspLEI GCGC 2 cut(s) 232, 838
AspS9I GGNCC 8 cut(s) 205, 265, 289, 290, 413, 514, 543, 590
AsuC2I CCSGG 2 cut(s) 412, 499
AsuHPI GGTGA 2 cut(s) 681, 895
AsuII TTCGAA 2 cut(s) 611, 673
AvaI CYCGRG 3 cut(s) 191, 516, 538
AvaII GGWCC 1 cut(s) 543
BaeGI GKGCMC 2 cut(s) 293, 557
BanII GRGCYC 5 cut(s) 60, 192, 293, 539, 576
Bbv12I GWGCWC 1 cut(s) 557
BbvI GCAGC 5 cut(s) 50, 59, 68, 212, 845
BccI CCATC 2 cut(s) 26, 887
BceAI ACGGC 2 cut(s) 85, 114
BcgI CGANNNNNNTGC 2 cut(s) 663, 697
BciT130I CCWGG 3 cut(s) 578, 627, 744
BclI TGATCA 1 cut(s) 937
BcnI CCSGG 2 cut(s) 412, 499
BcoDI GTCTC 1 cut(s) 103
BfaI CTAG 3 cut(s) 51, 561, 884
BfmI CTRYAG 1 cut(s) 348
BfoI RGCGCY 1 cut(s) 839
BfrI CTTAAG 1 cut(s) 794
BfuAI ACCTGC 1 cut(s) 914
BisI GCNGC 8 cut(s) 39, 48, 82, 201, 204, 513, 593, 834
BlsI GCNGC 8 cut(s) 40, 49, 83, 202, 205, 514, 594, 835
BmcAI AGTACT 2 cut(s) 65, 945
Bme1390I CCNGG 5 cut(s) 412, 499, 578, 627, 744
Bme18I GGWCC 1 cut(s) 543
BmeT110I CYCGRG 3 cut(s) 191, 516, 538
BmgT120I GGNCC 8 cut(s) 205, 265, 289, 290, 413, 514, 543, 590
BmiI GGNNCC 4 cut(s) 291, 544, 575, 696
BmrFI CCNGG 5 cut(s) 412, 499, 578, 627, 744
BmrI ACTGGG 1 cut(s) 579
BmsI GCATC 1 cut(s) 604
BmuI ACTGGG 1 cut(s) 579
BpmI CTGGAG 1 cut(s) 63
Bpu14I TTCGAA 2 cut(s) 611, 673
BpuEI CTTGAG 1 cut(s) 44
BpuMI CCSGG 2 cut(s) 412, 499
BsaI GGTCTC 1 cut(s) 103
BsaJI CCNNGG 4 cut(s) 360, 577, 743, 828
Bsc4I CCNNNNNNNGG 4 cut(s) 226, 307, 366, 667
Bse118I RCCGGY 1 cut(s) 691
Bse1I ACTGG 1 cut(s) 574
Bse3DI GCAATG 1 cut(s) 432
BseBI CCWGG 3 cut(s) 578, 627, 744
BseDI CCNNGG 4 cut(s) 360, 577, 743, 828
BseGI GGATG 3 cut(s) 216, 595, 931
BseLI CCNNNNNNNGG 4 cut(s) 226, 307, 366, 667
BseMI GCAATG 1 cut(s) 432
BseMII CTCAG 1 cut(s) 19
BseNI ACTGG 1 cut(s) 574
BseRI GAGGAG 1 cut(s) 770
BseSI GKGCMC 2 cut(s) 293, 557
BseXI GCAGC 5 cut(s) 50, 59, 68, 212, 845
BseYI CCCAGC 3 cut(s) 262, 286, 428
BshFI GGCC 7 cut(s) 129, 206, 267, 291, 415, 515, 592
BsiHKAI GWGCWC 1 cut(s) 557
BsiHKCI CYCGRG 3 cut(s) 191, 516, 538
BsiSI CCGG 3 cut(s) 411, 498, 692
BslFI GGGAC 1 cut(s) 801
BslI CCNNNNNNNGG 4 cut(s) 226, 307, 366, 667
BsmAI GTCTC 1 cut(s) 103
BsmFI GGGAC 1 cut(s) 801
BsmI GAATGC 1 cut(s) 317
BsnI GGCC 7 cut(s) 129, 206, 267, 291, 415, 515, 592
Bso31I GGTCTC 1 cut(s) 103
BsoBI CYCGRG 3 cut(s) 191, 516, 538
Bsp119I TTCGAA 2 cut(s) 611, 673
Bsp120I GGGCCC 1 cut(s) 289
Bsp1286I GDGCHC 6 cut(s) 60, 192, 293, 539, 557, 576
Bsp1407I TGTACA 1 cut(s) 390
Bsp143I GATC 5 cut(s) 8, 445, 474, 525, 937
BspACI CCGC 6 cut(s) 123, 203, 472, 512, 593, 809
BspANI GGCC 7 cut(s) 129, 206, 267, 291, 415, 515, 592
BspCNI CTCAG 1 cut(s) 18
BspHI TCATGA 1 cut(s) 237
BspLI GGNNCC 4 cut(s) 291, 544, 575, 696
BspMI ACCTGC 1 cut(s) 914
BspPI GGATC 2 cut(s) 482, 520
BspT104I TTCGAA 2 cut(s) 611, 673
BspTI CTTAAG 1 cut(s) 794
BspTNI GGTCTC 1 cut(s) 103
BsrDI GCAATG 1 cut(s) 432
BsrFI RCCGGY 1 cut(s) 691
BsrGI TGTACA 1 cut(s) 390
BsrI ACTGG 1 cut(s) 574
BssAI RCCGGY 1 cut(s) 691
BssECI CCNNGG 4 cut(s) 360, 577, 743, 828
BssMI GATC 5 cut(s) 8, 445, 474, 525, 937
BssT1I CCWWGG 1 cut(s) 828
Bst2UI CCWGG 3 cut(s) 578, 627, 744
Bst4CI ACNGT 3 cut(s) 361, 464, 552
BstAFI CTTAAG 1 cut(s) 794
BstAUI TGTACA 1 cut(s) 390
BstBI TTCGAA 2 cut(s) 611, 673
BstC8I GCNNGC 4 cut(s) 127, 510, 649, 653
BstDEI CTNAG 2 cut(s) 5, 920
BstDSI CCRYGG 1 cut(s) 360
BstF5I GGATG 3 cut(s) 216, 595, 931
BstH2I RGCGCY 1 cut(s) 839
BstHHI GCGC 2 cut(s) 232, 838
BstKTI GATC 5 cut(s) 11, 448, 477, 528, 940
BstMAI GTCTC 1 cut(s) 103
BstMBI GATC 5 cut(s) 8, 445, 474, 525, 937
BstMWI GCNNNNNNNGC 8 cut(s) 44, 47, 78, 561, 592, 657, 833, 906
BstNI CCWGG 3 cut(s) 578, 627, 744
BstNSI RCATGY 2 cut(s) 236, 512
BstSCI CCNGG 5 cut(s) 410, 497, 576, 625, 742
BstSFI CTRYAG 1 cut(s) 348
BstSLI GKGCMC 2 cut(s) 293, 557
BstV1I GCAGC 5 cut(s) 50, 59, 68, 212, 845
BstXI CCANNNNNNTGG 1 cut(s) 286
BsuRI GGCC 7 cut(s) 129, 206, 267, 291, 415, 515, 592
BtgI CCRYGG 1 cut(s) 360
BtsCI GGATG 3 cut(s) 216, 595, 931
BtsIMutI CAGTG 1 cut(s) 249
BveI ACCTGC 1 cut(s) 914
Cac8I GCNNGC 4 cut(s) 127, 510, 649, 653
CaiI CAGNNNCTG 2 cut(s) 179, 251
CciI TCATGA 1 cut(s) 237
CfoI GCGC 2 cut(s) 232, 838
Cfr10I RCCGGY 1 cut(s) 691
Cfr13I GGNCC 8 cut(s) 205, 265, 289, 290, 413, 514, 543, 590
Csp6I GTAC 4 cut(s) 64, 370, 391, 944
CviAII CATG 5 cut(s) 89, 233, 238, 469, 509
CviQI GTAC 4 cut(s) 64, 370, 391, 944
DdeI CTNAG 2 cut(s) 5, 920
DpnI GATC 5 cut(s) 10, 447, 476, 527, 939
DpnII GATC 5 cut(s) 8, 445, 474, 525, 937
DraI TTTAAA 1 cut(s) 913
DraIII CACNNNGTG 1 cut(s) 307
EaeI YGGCCR 1 cut(s) 127
EciI GGCGGA 1 cut(s) 824
Eco130I CCWWGG 1 cut(s) 828
Eco24I GRGCYC 5 cut(s) 60, 192, 293, 539, 576
Eco31I GGTCTC 1 cut(s) 103
Eco47I GGWCC 1 cut(s) 543
Eco47III AGCGCT 1 cut(s) 837
Eco88I CYCGRG 3 cut(s) 191, 516, 538
EcoRI GAATTC 1 cut(s) 212
EcoRII CCWGG 3 cut(s) 576, 625, 742
EcoT14I CCWWGG 1 cut(s) 828
EcoT38I GRGCYC 5 cut(s) 60, 192, 293, 539, 576
ErhI CCWWGG 1 cut(s) 828
FaeI CATG 5 cut(s) 92, 236, 241, 472, 512
FalI AAGNNNNNCTT 2 cut(s) 149, 181
FaqI GGGAC 1 cut(s) 801
FatI CATG 5 cut(s) 88, 232, 237, 468, 508
FbaI TGATCA 1 cut(s) 937
Fnu4HI GCNGC 8 cut(s) 39, 48, 82, 201, 204, 513, 593, 834
FokI GGATG 3 cut(s) 203, 582, 918
FriOI GRGCYC 5 cut(s) 60, 192, 293, 539, 576
Fsp4HI GCNGC 8 cut(s) 39, 48, 82, 201, 204, 513, 593, 834
FspBI CTAG 3 cut(s) 51, 561, 884
GlaI GCGC 2 cut(s) 231, 837
GluI GCNGC 8 cut(s) 39, 48, 82, 201, 204, 513, 593, 834
GsaI CCCAGC 3 cut(s) 266, 290, 432
GsuI CTGGAG 1 cut(s) 63
HaeII RGCGCY 1 cut(s) 839
HaeIII GGCC 7 cut(s) 129, 206, 267, 291, 415, 515, 592
HapII CCGG 3 cut(s) 411, 498, 692
HhaI GCGC 2 cut(s) 232, 838
Hin1II CATG 5 cut(s) 92, 236, 241, 472, 512
Hin6I GCGC 2 cut(s) 230, 836
HinP1I GCGC 2 cut(s) 230, 836
HinfI GANTC 3 cut(s) 27, 329, 675
HpaII CCGG 3 cut(s) 411, 498, 692
HphI GGTGA 2 cut(s) 681, 895
Hpy166II GTNNAC 2 cut(s) 555, 618
Hpy188I TCNGA 2 cut(s) 8, 853
Hpy188III TCNNGA 4 cut(s) 193, 238, 449, 935
Hpy8I GTNNAC 2 cut(s) 555, 618
Hpy99I CGWCG 2 cut(s) 320, 893
HpyAV CCTTC 3 cut(s) 138, 146, 190
HpyCH4III ACNGT 3 cut(s) 361, 464, 552
HpyCH4IV ACGT 2 cut(s) 318, 480
HpyCH4V TGCA 6 cut(s) 84, 182, 245, 555, 684, 803
HpyF10VI GCNNNNNNNGC 8 cut(s) 44, 47, 78, 561, 592, 657, 833, 906
HpyF3I CTNAG 2 cut(s) 5, 920
HpySE526I ACGT 2 cut(s) 318, 480
Hsp92II CATG 5 cut(s) 92, 236, 241, 472, 512
HspAI GCGC 2 cut(s) 230, 836
Ksp22I TGATCA 1 cut(s) 937
Kzo9I GATC 5 cut(s) 8, 445, 474, 525, 937
LmnI GCTCC 4 cut(s) 44, 579, 700, 757
Lsp1109I GCAGC 5 cut(s) 50, 59, 68, 212, 845
LweI GCATC 1 cut(s) 604
MaeI CTAG 3 cut(s) 51, 561, 884
MaeII ACGT 2 cut(s) 318, 480
MaeIII GTNAC 1 cut(s) 330
MalI GATC 5 cut(s) 10, 447, 476, 527, 939
MboI GATC 5 cut(s) 8, 445, 474, 525, 937
MfeI CAATTG 2 cut(s) 492, 679
MhlI GDGCHC 6 cut(s) 60, 192, 293, 539, 557, 576
MluCI AATT 4 cut(s) 212, 492, 679, 699
MlyI GAGTC 1 cut(s) 338
MmeI TCCRAC 1 cut(s) 728
MseI TTAA 2 cut(s) 795, 912
MspA1I CMGCKG 4 cut(s) 41, 81, 125, 203
MspCI CTTAAG 1 cut(s) 794
MspI CCGG 3 cut(s) 411, 498, 692
MspR9I CCNGG 5 cut(s) 412, 499, 578, 627, 744
MunI CAATTG 2 cut(s) 492, 679
Mva1269I GAATGC 1 cut(s) 317
MvaI CCWGG 3 cut(s) 578, 627, 744
MwoI GCNNNNNNNGC 8 cut(s) 44, 47, 78, 561, 592, 657, 833, 906
NciI CCSGG 2 cut(s) 412, 499
NdeII GATC 5 cut(s) 8, 445, 474, 525, 937
NlaIII CATG 5 cut(s) 92, 236, 241, 472, 512
NlaIV GGNNCC 4 cut(s) 291, 544, 575, 696
NmuCI GTSAC 1 cut(s) 330
NspI RCATGY 2 cut(s) 236, 512
NspV TTCGAA 2 cut(s) 611, 673
PaeI GCATGC 1 cut(s) 512
PagI TCATGA 1 cut(s) 237
PaqCI CACCTGC 1 cut(s) 914
PcsI WCGNNNNNNNCGW 1 cut(s) 378
PctI GAATGC 1 cut(s) 317
PfeI GAWTC 2 cut(s) 27, 675
PflFI GACNNNGTC 1 cut(s) 464
PflMI CCANNNNNTGG 1 cut(s) 307
PkrI GCNGC 8 cut(s) 40, 49, 83, 202, 205, 514, 594, 835
PleI GAGTC 1 cut(s) 337
PpsI GAGTC 1 cut(s) 337
Psp6I CCWGG 3 cut(s) 576, 625, 742
PspFI CCCAGC 3 cut(s) 262, 286, 428
PspGI CCWGG 3 cut(s) 576, 625, 742
PspN4I GGNNCC 4 cut(s) 291, 544, 575, 696
PspOMI GGGCCC 1 cut(s) 289
PspPI GGNCC 8 cut(s) 205, 265, 289, 290, 413, 514, 543, 590
PstNI CAGNNNCTG 2 cut(s) 179, 251
PsyI GACNNNGTC 1 cut(s) 464
PvuII CAGCTG 2 cut(s) 41, 81
RsaI GTAC 4 cut(s) 65, 371, 392, 945
RsaNI GTAC 4 cut(s) 64, 370, 391, 944
SaqAI TTAA 2 cut(s) 795, 912
SatI GCNGC 8 cut(s) 39, 48, 82, 201, 204, 513, 593, 834
Sau3AI GATC 5 cut(s) 8, 445, 474, 525, 937
Sau96I GGNCC 8 cut(s) 205, 265, 289, 290, 413, 514, 543, 590
ScaI AGTACT 2 cut(s) 65, 945
SchI GAGTC 1 cut(s) 338
ScrFI CCNGG 5 cut(s) 412, 499, 578, 627, 744
SduI GDGCHC 6 cut(s) 60, 192, 293, 539, 557, 576
SfaNI GCATC 1 cut(s) 604
SfcI CTRYAG 1 cut(s) 348
SfuI TTCGAA 2 cut(s) 611, 673
SinI GGWCC 1 cut(s) 543
SmlI CTYRAG 2 cut(s) 59, 794
SmoI CTYRAG 2 cut(s) 59, 794
SphI GCATGC 1 cut(s) 512
Sse9I AATT 4 cut(s) 212, 492, 679, 699
SsiI CCGC 6 cut(s) 123, 203, 472, 512, 593, 809
SspMI CTAG 3 cut(s) 51, 561, 884
StyD4I CCNGG 5 cut(s) 410, 497, 576, 625, 742
StyI CCWWGG 1 cut(s) 828
TaaI ACNGT 3 cut(s) 361, 464, 552
TaiI ACGT 2 cut(s) 321, 483
TaqI TCGA 7 cut(s) 381, 444, 450, 605, 611, 673, 891
TasI AATT 4 cut(s) 212, 492, 679, 699
TatI WGTACW 3 cut(s) 63, 390, 943
TauI GCSGC 3 cut(s) 206, 515, 595
TfiI GAWTC 2 cut(s) 27, 675
Tru1I TTAA 2 cut(s) 795, 912
Tru9I TTAA 2 cut(s) 795, 912
TscAI CASTG 1 cut(s) 256
TseFI GTSAC 1 cut(s) 330
TseI GCWGC 5 cut(s) 38, 47, 81, 200, 833
Tsp45I GTSAC 1 cut(s) 330
TspDTI ATGAA 2 cut(s) 205, 870
TspGWI ACGGA 2 cut(s) 387, 767
TspRI CASTG 1 cut(s) 256
Tth111I GACNNNGTC 1 cut(s) 464
Van91I CCANNNNNTGG 1 cut(s) 307
Vha464I CTTAAG 1 cut(s) 794
VneI GTGCAC 1 cut(s) 553
VpaK11BI GGWCC 1 cut(s) 543
XapI RAATTY 1 cut(s) 212
XceI RCATGY 2 cut(s) 236, 512
XspI CTAG 3 cut(s) 51, 561, 884
ZrmI AGTACT 2 cut(s) 65, 945
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.