Kinetochore protein NDC80 homolog
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr3g0478121 RchiOBHm_Chr3g0478211 RchiOBHm_Chr3g0478341 |
| rosa_laevigata | RLG00000023659 |
| rosa_samantha | Rh1DG090400 Rh3AG216600 Rh3AG218100 Rh3AG218700 Rh3CG246700 Rh3CG247200 |
| rosa_wichuraiana | Rw0G006940 Rw0G023440 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 84 |
| AciI | CCGC | 7 cut(s) | 17, 46, 82, 105, 148, 181, 252 |
| AcoI | YGGCCR | 1 cut(s) | 11 |
| AcsI | RAATTY | 2 cut(s) | 236, 279 |
| AcuI | CTGAAG | 1 cut(s) | 389 |
| AgsI | TTSAA | 2 cut(s) | 383, 418 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 53, 85 |
| AluBI | AGCT | 1 cut(s) | 69 |
| AluI | AGCT | 1 cut(s) | 69 |
| Alw26I | GTCTC | 1 cut(s) | 293 |
| AoxI | GGCC | 3 cut(s) | 11, 29, 106 |
| ApoI | RAATTY | 2 cut(s) | 236, 279 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 271, 303 |
| AspS9I | GGNCC | 1 cut(s) | 107 |
| AsuC2I | CCSGG | 1 cut(s) | 111 |
| AsuHPI | GGTGA | 2 cut(s) | 257, 311 |
| BbsI | GAAGAC | 1 cut(s) | 220 |
| BccI | CCATC | 4 cut(s) | 31, 128, 192, 201 |
| BceAI | ACGGC | 3 cut(s) | 16, 26, 118 |
| BcnI | CCSGG | 1 cut(s) | 111 |
| BcoDI | GTCTC | 1 cut(s) | 293 |
| BfaI | CTAG | 1 cut(s) | 66 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 114 |
| BisI | GCNGC | 2 cut(s) | 82, 106 |
| BlsI | GCNGC | 2 cut(s) | 83, 107 |
| Bme1390I | CCNGG | 1 cut(s) | 111 |
| BmgT120I | GGNCC | 1 cut(s) | 107 |
| BmiI | GGNNCC | 2 cut(s) | 109, 118 |
| BmrFI | CCNGG | 1 cut(s) | 111 |
| BpiI | GAAGAC | 1 cut(s) | 220 |
| BpuMI | CCSGG | 1 cut(s) | 111 |
| BsaJI | CCNNGG | 2 cut(s) | 8, 109 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 41, 71 |
| Bse1I | ACTGG | 2 cut(s) | 75, 403 |
| BseDI | CCNNGG | 2 cut(s) | 8, 109 |
| BseNI | ACTGG | 2 cut(s) | 75, 403 |
| BseRI | GAGGAG | 3 cut(s) | 76, 200, 358 |
| BshFI | GGCC | 3 cut(s) | 13, 31, 108 |
| BsiSI | CCGG | 1 cut(s) | 111 |
| BslFI | GGGAC | 1 cut(s) | 361 |
| BsmAI | GTCTC | 1 cut(s) | 293 |
| BsmBI | CGTCTC | 1 cut(s) | 293 |
| BsmFI | GGGAC | 1 cut(s) | 361 |
| BsnI | GGCC | 3 cut(s) | 13, 31, 108 |
| BspACI | CCGC | 7 cut(s) | 17, 46, 82, 105, 148, 181, 252 |
| BspANI | GGCC | 3 cut(s) | 13, 31, 108 |
| BspLI | GGNNCC | 2 cut(s) | 109, 118 |
| BsrBI | CCGCTC | 1 cut(s) | 84 |
| BsrI | ACTGG | 2 cut(s) | 75, 403 |
| BssECI | CCNNGG | 2 cut(s) | 8, 109 |
| BstDSI | CCRYGG | 1 cut(s) | 8 |
| BstMAI | GTCTC | 1 cut(s) | 293 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 114 |
| BstSCI | CCNGG | 1 cut(s) | 109 |
| BstV2I | GAAGAC | 1 cut(s) | 220 |
| BsuRI | GGCC | 3 cut(s) | 13, 31, 108 |
| BtgI | CCRYGG | 1 cut(s) | 8 |
| BtsIMutI | CAGTG | 1 cut(s) | 396 |
| Cfr13I | GGNCC | 1 cut(s) | 107 |
| CviJI | RGCY | 6 cut(s) | 13, 31, 69, 81, 108, 117 |
| CviKI_1 | RGCY | 6 cut(s) | 13, 31, 69, 81, 108, 117 |
| EaeI | YGGCCR | 1 cut(s) | 11 |
| EciI | GGCGGA | 2 cut(s) | 35, 170 |
| Eco57I | CTGAAG | 1 cut(s) | 389 |
| Esp3I | CGTCTC | 1 cut(s) | 293 |
| FaiI | YATR | 1 cut(s) | 413 |
| FaqI | GGGAC | 1 cut(s) | 361 |
| FauI | CCCGC | 1 cut(s) | 259 |
| Fnu4HI | GCNGC | 2 cut(s) | 82, 106 |
| Fsp4HI | GCNGC | 2 cut(s) | 82, 106 |
| FspBI | CTAG | 1 cut(s) | 66 |
| GluI | GCNGC | 2 cut(s) | 82, 106 |
| HaeIII | GGCC | 3 cut(s) | 13, 31, 108 |
| HapII | CCGG | 1 cut(s) | 111 |
| HinfI | GANTC | 4 cut(s) | 56, 96, 374, 383 |
| HpaII | CCGG | 1 cut(s) | 111 |
| HphI | GGTGA | 2 cut(s) | 257, 311 |
| Hpy188I | TCNGA | 1 cut(s) | 369 |
| Hpy99I | CGWCG | 1 cut(s) | 288 |
| HpyAV | CCTTC | 1 cut(s) | 364 |
| HpyCH4V | TGCA | 1 cut(s) | 404 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 114 |
| LmnI | GCTCC | 2 cut(s) | 89, 122 |
| LpnPI | CCDG | 7 cut(s) | 88, 124, 186, 268, 344, 346, 384 |
| MaeI | CTAG | 1 cut(s) | 66 |
| MbiI | CCGCTC | 1 cut(s) | 84 |
| MboII | GAAGA | 1 cut(s) | 220 |
| MluCI | AATT | 5 cut(s) | 197, 236, 270, 279, 309 |
| MlyI | GAGTC | 2 cut(s) | 50, 383 |
| MmeI | TCCRAC | 2 cut(s) | 84, 150 |
| MspI | CCGG | 1 cut(s) | 111 |
| MspR9I | CCNGG | 1 cut(s) | 111 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 114 |
| NciI | CCSGG | 1 cut(s) | 111 |
| NlaIV | GGNNCC | 2 cut(s) | 109, 118 |
| PfeI | GAWTC | 2 cut(s) | 96, 383 |
| PkrI | GCNGC | 2 cut(s) | 83, 107 |
| PleI | GAGTC | 2 cut(s) | 50, 382 |
| PpsI | GAGTC | 2 cut(s) | 50, 382 |
| PspN4I | GGNNCC | 2 cut(s) | 109, 118 |
| PspPI | GGNCC | 1 cut(s) | 107 |
| SatI | GCNGC | 2 cut(s) | 82, 106 |
| Sau96I | GGNCC | 1 cut(s) | 107 |
| SchI | GAGTC | 2 cut(s) | 50, 383 |
| ScrFI | CCNGG | 1 cut(s) | 111 |
| SetI | ASST | 4 cut(s) | 71, 138, 169, 208 |
| Sse9I | AATT | 5 cut(s) | 197, 236, 270, 279, 309 |
| SsiI | CCGC | 7 cut(s) | 17, 46, 82, 105, 148, 181, 252 |
| SspMI | CTAG | 1 cut(s) | 66 |
| StyD4I | CCNGG | 1 cut(s) | 109 |
| TaqI | TCGA | 3 cut(s) | 36, 132, 163 |
| TasI | AATT | 5 cut(s) | 197, 236, 270, 279, 309 |
| TauI | GCSGC | 2 cut(s) | 84, 108 |
| TfiI | GAWTC | 2 cut(s) | 96, 383 |
| TscAI | CASTG | 1 cut(s) | 403 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 403 |
| XapI | RAATTY | 2 cut(s) | 236, 279 |
| XspI | CTAG | 1 cut(s) | 66 |