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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g15980 |
| rosa_chinensis | RchiOBHm_Chr4g0407831 |
| rosa_laevigata | RLG00000008695 RLG00000024328 |
| rosa_multiflora | Rmu_sc0000289.1_g000004 Rmu_sc0003573.1_g000038 |
| rosa_roxburghii | Rroxscaffold_5G00352400 Rroxscaffold_6G00411530 |
| rosa_rugosa | Rorug04G0081700 |
| rosa_samantha | Rh3DG198500 Rh3DG198600 Rh4AG146700 Rh4BG144200 Rh4CG153200 Rh4DG140700 |
| rosa_wichuraiana | Rw3G014420 Rw4G012040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 326 |
| AjnI | CCWGG | 1 cut(s) | 168 |
| Ama87I | CYCGRG | 1 cut(s) | 347 |
| AoxI | GGCC | 1 cut(s) | 112 |
| ApeKI | GCWGC | 1 cut(s) | 41 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| AvaI | CYCGRG | 1 cut(s) | 347 |
| BanII | GRGCYC | 1 cut(s) | 348 |
| BbvI | GCAGC | 1 cut(s) | 53 |
| BccI | CCATC | 1 cut(s) | 389 |
| BciT130I | CCWGG | 1 cut(s) | 170 |
| BfmI | CTRYAG | 1 cut(s) | 116 |
| BisI | GCNGC | 1 cut(s) | 42 |
| BlsI | GCNGC | 1 cut(s) | 43 |
| Bme1390I | CCNGG | 1 cut(s) | 170 |
| BmeT110I | CYCGRG | 1 cut(s) | 347 |
| BmrFI | CCNGG | 1 cut(s) | 170 |
| BmsI | GCATC | 1 cut(s) | 283 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 221, 253 |
| BseBI | CCWGG | 1 cut(s) | 170 |
| BseGI | GGATG | 7 cut(s) | 178, 232, 247, 253, 289, 295, 310 |
| BseXI | GCAGC | 1 cut(s) | 53 |
| BsgI | GTGCAG | 1 cut(s) | 170 |
| BshFI | GGCC | 1 cut(s) | 114 |
| BsiHKCI | CYCGRG | 1 cut(s) | 347 |
| BsnI | GGCC | 1 cut(s) | 114 |
| BsoBI | CYCGRG | 1 cut(s) | 347 |
| Bsp1286I | GDGCHC | 1 cut(s) | 348 |
| Bsp143I | GATC | 1 cut(s) | 85 |
| BspANI | GGCC | 1 cut(s) | 114 |
| BspMAI | CTGCAG | 1 cut(s) | 120 |
| BssMI | GATC | 1 cut(s) | 85 |
| Bst2UI | CCWGG | 1 cut(s) | 170 |
| BstC8I | GCNNGC | 3 cut(s) | 112, 116, 355 |
| BstEII | GGTNACC | 1 cut(s) | 164 |
| BstF5I | GGATG | 7 cut(s) | 178, 232, 247, 253, 289, 295, 310 |
| BstKTI | GATC | 1 cut(s) | 88 |
| BstMBI | GATC | 1 cut(s) | 85 |
| BstNI | CCWGG | 1 cut(s) | 170 |
| BstNSI | RCATGY | 1 cut(s) | 357 |
| BstPI | GGTNACC | 1 cut(s) | 164 |
| BstSCI | CCNGG | 1 cut(s) | 168 |
| BstSFI | CTRYAG | 1 cut(s) | 116 |
| BstV1I | GCAGC | 1 cut(s) | 53 |
| BsuRI | GGCC | 1 cut(s) | 114 |
| BtsCI | GGATG | 7 cut(s) | 178, 232, 247, 253, 289, 295, 310 |
| Cac8I | GCNNGC | 3 cut(s) | 112, 116, 355 |
| CviAII | CATG | 2 cut(s) | 158, 354 |
| CviJI | RGCY | 2 cut(s) | 114, 346 |
| CviKI_1 | RGCY | 2 cut(s) | 114, 346 |
| DpnI | GATC | 1 cut(s) | 87 |
| DpnII | GATC | 1 cut(s) | 85 |
| DraI | TTTAAA | 1 cut(s) | 36 |
| Eco147I | AGGCCT | 1 cut(s) | 114 |
| Eco24I | GRGCYC | 1 cut(s) | 348 |
| Eco88I | CYCGRG | 1 cut(s) | 347 |
| Eco91I | GGTNACC | 1 cut(s) | 164 |
| EcoO65I | GGTNACC | 1 cut(s) | 164 |
| EcoRII | CCWGG | 1 cut(s) | 168 |
| EcoT38I | GRGCYC | 1 cut(s) | 348 |
| FaeI | CATG | 2 cut(s) | 161, 357 |
| FaiI | YATR | 4 cut(s) | 93, 159, 204, 355 |
| FatI | CATG | 2 cut(s) | 157, 353 |
| Fnu4HI | GCNGC | 1 cut(s) | 42 |
| FokI | GGATG | 7 cut(s) | 185, 239, 254, 260, 296, 302, 317 |
| FriOI | GRGCYC | 1 cut(s) | 348 |
| Fsp4HI | GCNGC | 1 cut(s) | 42 |
| GluI | GCNGC | 1 cut(s) | 42 |
| HaeIII | GGCC | 1 cut(s) | 114 |
| Hin1II | CATG | 2 cut(s) | 161, 357 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 1 cut(s) | 187 |
| Hpy188I | TCNGA | 2 cut(s) | 241, 283 |
| Hpy188III | TCNNGA | 1 cut(s) | 302 |
| Hpy8I | GTNNAC | 1 cut(s) | 187 |
| HpyCH4V | TGCA | 4 cut(s) | 41, 118, 151, 357 |
| Hsp92II | CATG | 2 cut(s) | 161, 357 |
| Kzo9I | GATC | 1 cut(s) | 85 |
| Lsp1109I | GCAGC | 1 cut(s) | 53 |
| LweI | GCATC | 1 cut(s) | 283 |
| MaeIII | GTNAC | 1 cut(s) | 164 |
| MalI | GATC | 1 cut(s) | 87 |
| MboI | GATC | 1 cut(s) | 85 |
| MboII | GAAGA | 4 cut(s) | 22, 80, 191, 388 |
| MhlI | GDGCHC | 1 cut(s) | 348 |
| MluCI | AATT | 2 cut(s) | 321, 379 |
| MnlI | CCTC | 2 cut(s) | 217, 238 |
| MseI | TTAA | 2 cut(s) | 21, 35 |
| MslI | CAYNNNNRTG | 3 cut(s) | 96, 207, 282 |
| MspR9I | CCNGG | 1 cut(s) | 170 |
| MvaI | CCWGG | 1 cut(s) | 170 |
| NdeII | GATC | 1 cut(s) | 85 |
| NlaIII | CATG | 2 cut(s) | 161, 357 |
| NspI | RCATGY | 1 cut(s) | 357 |
| PaeI | GCATGC | 1 cut(s) | 357 |
| PceI | AGGCCT | 1 cut(s) | 114 |
| PkrI | GCNGC | 1 cut(s) | 43 |
| Psp6I | CCWGG | 1 cut(s) | 168 |
| PspEI | GGTNACC | 1 cut(s) | 164 |
| PspGI | CCWGG | 1 cut(s) | 168 |
| PstI | CTGCAG | 1 cut(s) | 120 |
| RseI | CAYNNNNRTG | 3 cut(s) | 96, 207, 282 |
| SaqAI | TTAA | 2 cut(s) | 21, 35 |
| SatI | GCNGC | 1 cut(s) | 42 |
| Sau3AI | GATC | 1 cut(s) | 85 |
| ScrFI | CCNGG | 1 cut(s) | 170 |
| SduI | GDGCHC | 1 cut(s) | 348 |
| SetI | ASST | 3 cut(s) | 21, 68, 171 |
| SfaNI | GCATC | 1 cut(s) | 283 |
| SfcI | CTRYAG | 1 cut(s) | 116 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 96, 207, 282 |
| SphI | GCATGC | 1 cut(s) | 357 |
| Sse9I | AATT | 2 cut(s) | 321, 379 |
| SseBI | AGGCCT | 1 cut(s) | 114 |
| StuI | AGGCCT | 1 cut(s) | 114 |
| StyD4I | CCNGG | 1 cut(s) | 168 |
| TasI | AATT | 2 cut(s) | 321, 379 |
| Tru1I | TTAA | 2 cut(s) | 21, 35 |
| Tru9I | TTAA | 2 cut(s) | 21, 35 |
| TseI | GCWGC | 1 cut(s) | 41 |
| TspDTI | ATGAA | 3 cut(s) | 80, 191, 321 |
| XceI | RCATGY | 1 cut(s) | 357 |