Core-2/I-Branching enzyme
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02470 AT5G02470 AT5G02470 |
| fragaria_vesca | FvH4_6g14010 FvH4_6g14010 FvH4_6g14010 FvH4_6g14010 FvH4_6g14010 FvH4_6g14010 FvH4_6g14010 |
| malus_domestica | MD04G1126400.v1.1 |
| prunus_persica | Prupe.6G253200_v2.0.a1 Prupe.6G253200_v2.0.a1 |
| pyrus_communis | pycom04g11340 |
| rosa_chinensis | RchiOBHm_Chr3g0466841 |
| rosa_laevigata | RLG00000024547 |
| rosa_multiflora | Rmu_sc0026100.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00414090 |
| rosa_rugosa | Rorug03G0083900 Rorug03G0084000 Rorug03G0084100 |
| rosa_samantha | Rh3AG131700 Rh3BG152800 Rh3CG153000 Rh3DG153900 |
| rosa_wichuraiana | Rw3G012450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 665 |
| Acc36I | ACCTGC | 1 cut(s) | 324 |
| AccB1I | GGYRCC | 2 cut(s) | 2031, 2114 |
| AccI | GTMKAC | 3 cut(s) | 177, 761, 1474 |
| AccII | CGCG | 4 cut(s) | 398, 428, 443, 479 |
| AccIII | TCCGGA | 1 cut(s) | 1365 |
| AclWI | GGATC | 2 cut(s) | 665, 1046 |
| AcsI | RAATTY | 3 cut(s) | 794, 1240, 1572 |
| AcuI | CTGAAG | 5 cut(s) | 269, 293, 1968, 2039, 2058 |
| AcyI | GRCGYC | 1 cut(s) | 345 |
| AdeI | CACNNNGTG | 1 cut(s) | 1115 |
| AfaI | GTAC | 7 cut(s) | 107, 296, 371, 683, 1135, 1411, 1984 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 331, 1119, 1699, 2130 |
| AflIII | ACRYGT | 2 cut(s) | 396, 1102 |
| AgeI | ACCGGT | 1 cut(s) | 245 |
| AgsI | TTSAA | 9 cut(s) | 745, 794, 1197, 1268, 1455, 1510, 1795, 1978, 2091 |
| AjnI | CCWGG | 2 cut(s) | 609, 1567 |
| AleI | CACNNNNGTG | 1 cut(s) | 920 |
| Alw21I | GWGCWC | 7 cut(s) | 363, 618, 917, 1024, 1083, 1373, 1968 |
| Alw26I | GTCTC | 4 cut(s) | 461, 1084, 1195, 2067 |
| Alw44I | GTGCAC | 1 cut(s) | 1964 |
| AlwI | GGATC | 2 cut(s) | 665, 1046 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1175 |
| Ama87I | CYCGRG | 4 cut(s) | 214, 223, 301, 356 |
| Aor13HI | TCCGGA | 1 cut(s) | 1365 |
| AoxI | GGCC | 4 cut(s) | 121, 202, 262, 656 |
| ApaLI | GTGCAC | 1 cut(s) | 1964 |
| ApeKI | GCWGC | 5 cut(s) | 280, 472, 1313, 1346, 1349 |
| ApoI | RAATTY | 3 cut(s) | 794, 1240, 1572 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 155, 187, 2112, 2144 |
| AseI | ATTAAT | 1 cut(s) | 525 |
| AsiGI | ACCGGT | 1 cut(s) | 245 |
| AspA2I | CCTAGG | 1 cut(s) | 205 |
| AspS9I | GGNCC | 4 cut(s) | 122, 263, 449, 598 |
| AsuC2I | CCSGG | 2 cut(s) | 675, 1113 |
| AsuHPI | GGTGA | 8 cut(s) | 79, 124, 269, 448, 1290, 1348, 1592, 1663 |
| AvaI | CYCGRG | 4 cut(s) | 214, 223, 301, 356 |
| AvaII | GGWCC | 2 cut(s) | 449, 598 |
| AvrII | CCTAGG | 1 cut(s) | 205 |
| BaeGI | GKGCMC | 1 cut(s) | 1968 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1704, 1737 |
| BanI | GGYRCC | 2 cut(s) | 2031, 2114 |
| BanII | GRGCYC | 5 cut(s) | 213, 363, 1024, 1083, 1373 |
| BbsI | GAAGAC | 1 cut(s) | 2079 |
| Bbv12I | GWGCWC | 7 cut(s) | 363, 618, 917, 1024, 1083, 1373, 1968 |
| BbvCI | CCTCAGC | 2 cut(s) | 267, 504 |
| BbvI | GCAGC | 5 cut(s) | 267, 459, 1325, 1336, 1358 |
| BccI | CCATC | 3 cut(s) | 406, 804, 1756 |
| BceAI | ACGGC | 3 cut(s) | 115, 217, 277 |
| BciT130I | CCWGG | 2 cut(s) | 611, 1569 |
| BclI | TGATCA | 1 cut(s) | 1854 |
| BcnI | CCSGG | 2 cut(s) | 675, 1113 |
| BcoDI | GTCTC | 4 cut(s) | 461, 1084, 1195, 2067 |
| BfaI | CTAG | 4 cut(s) | 206, 621, 1205, 1320 |
| BfmI | CTRYAG | 1 cut(s) | 762 |
| BfuAI | ACCTGC | 1 cut(s) | 324 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 31 |
| BglII | AGATCT | 1 cut(s) | 1819 |
| BisI | GCNGC | 7 cut(s) | 278, 281, 291, 473, 1314, 1347, 1350 |
| BlnI | CCTAGG | 1 cut(s) | 205 |
| BlpI | GCTNAGC | 1 cut(s) | 1309 |
| BlsI | GCNGC | 7 cut(s) | 279, 282, 292, 474, 1315, 1348, 1351 |
| BmcAI | AGTACT | 1 cut(s) | 107 |
| Bme1390I | CCNGG | 4 cut(s) | 611, 675, 1113, 1569 |
| Bme18I | GGWCC | 2 cut(s) | 449, 598 |
| BmeT110I | CYCGRG | 4 cut(s) | 214, 223, 301, 356 |
| BmgT120I | GGNCC | 4 cut(s) | 122, 263, 449, 598 |
| BmiI | GGNNCC | 8 cut(s) | 124, 212, 221, 424, 599, 1251, 2033, 2116 |
| BmrFI | CCNGG | 4 cut(s) | 611, 675, 1113, 1569 |
| BmsI | GCATC | 1 cut(s) | 1627 |
| BpiI | GAAGAC | 1 cut(s) | 2079 |
| BpmI | CTGGAG | 4 cut(s) | 632, 1488, 1808, 2130 |
| Bpu10I | CCTNAGC | 2 cut(s) | 267, 504 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1309 |
| BpuEI | CTTGAG | 2 cut(s) | 479, 1105 |
| BpuMI | CCSGG | 2 cut(s) | 675, 1113 |
| BsaHI | GRCGYC | 1 cut(s) | 345 |
| BsaI | GGTCTC | 1 cut(s) | 1084 |
| BsaJI | CCNNGG | 6 cut(s) | 97, 205, 215, 426, 593, 864 |
| BsaWI | WCCGGW | 4 cut(s) | 245, 698, 1054, 1365 |
| BsaXI | ACNNNNNCTCC | 3 cut(s) | 98, 128, 2134 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 331, 1119, 1699, 2130 |
| Bse118I | RCCGGY | 2 cut(s) | 119, 245 |
| Bse1I | ACTGG | 5 cut(s) | 993, 1032, 1169, 1693, 1908 |
| Bse3DI | GCAATG | 2 cut(s) | 1348, 1665 |
| BseAI | TCCGGA | 1 cut(s) | 1365 |
| BseBI | CCWGG | 2 cut(s) | 611, 1569 |
| BseDI | CCNNGG | 6 cut(s) | 97, 205, 215, 426, 593, 864 |
| BseGI | GGATG | 4 cut(s) | 815, 860, 1008, 1054 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 331, 1119, 1699, 2130 |
| BseMI | GCAATG | 2 cut(s) | 1348, 1665 |
| BseMII | CTCAG | 6 cut(s) | 281, 495, 544, 1297, 1347, 1922 |
| BseNI | ACTGG | 5 cut(s) | 993, 1032, 1169, 1693, 1908 |
| BseRI | GAGGAG | 9 cut(s) | 53, 56, 59, 68, 100, 103, 1102, 1271, 1363 |
| BseSI | GKGCMC | 1 cut(s) | 1968 |
| BseXI | GCAGC | 5 cut(s) | 267, 459, 1325, 1336, 1358 |
| BsgI | GTGCAG | 1 cut(s) | 458 |
| Bsh1236I | CGCG | 4 cut(s) | 398, 428, 443, 479 |
| Bsh1285I | CGRYCG | 1 cut(s) | 166 |
| BshFI | GGCC | 4 cut(s) | 123, 204, 264, 658 |
| BshNI | GGYRCC | 2 cut(s) | 2031, 2114 |
| BshTI | ACCGGT | 1 cut(s) | 245 |
| BsiEI | CGRYCG | 1 cut(s) | 166 |
| BsiHKAI | GWGCWC | 7 cut(s) | 363, 618, 917, 1024, 1083, 1373, 1968 |
| BsiHKCI | CYCGRG | 4 cut(s) | 214, 223, 301, 356 |
| BsiSI | CCGG | 7 cut(s) | 120, 246, 674, 699, 1055, 1113, 1366 |
| BslFI | GGGAC | 4 cut(s) | 541, 611, 827, 1716 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 331, 1119, 1699, 2130 |
| BsmAI | GTCTC | 4 cut(s) | 461, 1084, 1195, 2067 |
| BsmBI | CGTCTC | 1 cut(s) | 461 |
| BsmFI | GGGAC | 4 cut(s) | 541, 611, 827, 1716 |
| BsmI | GAATGC | 1 cut(s) | 412 |
| BsnI | GGCC | 4 cut(s) | 123, 204, 264, 658 |
| Bso31I | GGTCTC | 1 cut(s) | 1084 |
| BsoBI | CYCGRG | 4 cut(s) | 214, 223, 301, 356 |
| Bsp1286I | GDGCHC | 8 cut(s) | 213, 363, 618, 917, 1024, 1083, 1373, 1968 |
| Bsp13I | TCCGGA | 1 cut(s) | 1365 |
| Bsp143I | GATC | 8 cut(s) | 328, 670, 782, 1051, 1551, 1726, 1819, 1854 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1309 |
| BspANI | GGCC | 4 cut(s) | 123, 204, 264, 658 |
| BspCNI | CTCAG | 6 cut(s) | 280, 496, 543, 1296, 1348, 1921 |
| BspEI | TCCGGA | 1 cut(s) | 1365 |
| BspFNI | CGCG | 4 cut(s) | 398, 428, 443, 479 |
| BspHI | TCATGA | 1 cut(s) | 928 |
| BspLI | GGNNCC | 8 cut(s) | 124, 212, 221, 424, 599, 1251, 2033, 2116 |
| BspMI | ACCTGC | 1 cut(s) | 324 |
| BspPI | GGATC | 2 cut(s) | 665, 1046 |
| BspQI | GCTCTTC | 2 cut(s) | 1505, 1516 |
| BspT107I | GGYRCC | 2 cut(s) | 2031, 2114 |
| BspTNI | GGTCTC | 1 cut(s) | 1084 |
| BsrDI | GCAATG | 2 cut(s) | 1348, 1665 |
| BsrFI | RCCGGY | 2 cut(s) | 119, 245 |
| BsrI | ACTGG | 5 cut(s) | 993, 1032, 1169, 1693, 1908 |
| BssAI | RCCGGY | 2 cut(s) | 119, 245 |
| BssECI | CCNNGG | 6 cut(s) | 97, 205, 215, 426, 593, 864 |
| BssMI | GATC | 8 cut(s) | 328, 670, 782, 1051, 1551, 1726, 1819, 1854 |
| BssNI | GRCGYC | 1 cut(s) | 345 |
| BssT1I | CCWWGG | 1 cut(s) | 205 |
| Bst2UI | CCWGG | 2 cut(s) | 611, 1569 |
| Bst6I | CTCTTC | 3 cut(s) | 837, 1505, 1516 |
| BstACI | GRCGYC | 1 cut(s) | 345 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1963 |
| BstC8I | GCNNGC | 5 cut(s) | 121, 363, 477, 501, 735 |
| BstDEI | CTNAG | 8 cut(s) | 267, 504, 530, 690, 1283, 1309, 1356, 1908 |
| BstDSI | CCRYGG | 3 cut(s) | 97, 426, 864 |
| BstEII | GGTNACC | 1 cut(s) | 436 |
| BstF5I | GGATG | 4 cut(s) | 815, 860, 1008, 1054 |
| BstFNI | CGCG | 4 cut(s) | 398, 428, 443, 479 |
| BstKTI | GATC | 8 cut(s) | 331, 673, 785, 1054, 1554, 1729, 1822, 1857 |
| BstMAI | GTCTC | 4 cut(s) | 461, 1084, 1195, 2067 |
| BstMBI | GATC | 8 cut(s) | 328, 670, 782, 1051, 1551, 1726, 1819, 1854 |
| BstMCI | CGRYCG | 1 cut(s) | 166 |
| BstNI | CCWGG | 2 cut(s) | 611, 1569 |
| BstNSI | RCATGY | 1 cut(s) | 1106 |
| BstPI | GGTNACC | 1 cut(s) | 436 |
| BstSCI | CCNGG | 4 cut(s) | 609, 673, 1111, 1567 |
| BstSFI | CTRYAG | 1 cut(s) | 762 |
| BstSLI | GKGCMC | 1 cut(s) | 1968 |
| BstUI | CGCG | 4 cut(s) | 398, 428, 443, 479 |
| BstV1I | GCAGC | 5 cut(s) | 267, 459, 1325, 1336, 1358 |
| BstV2I | GAAGAC | 1 cut(s) | 2079 |
| BstX2I | RGATCY | 1 cut(s) | 1819 |
| BstYI | RGATCY | 1 cut(s) | 1819 |
| BsuRI | GGCC | 4 cut(s) | 123, 204, 264, 658 |
| BtgI | CCRYGG | 3 cut(s) | 97, 426, 864 |
| BtgZI | GCGATG | 1 cut(s) | 425 |
| BtsCI | GGATG | 4 cut(s) | 815, 860, 1008, 1054 |
| BtsI | GCAGTG | 1 cut(s) | 728 |
| BtsIMutI | CAGTG | 8 cut(s) | 538, 728, 882, 986, 1176, 1492, 1700, 1966 |
| BveI | ACCTGC | 1 cut(s) | 324 |
| Cac8I | GCNNGC | 5 cut(s) | 121, 363, 477, 501, 735 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1175 |
| CciI | TCATGA | 1 cut(s) | 928 |
| Cfr10I | RCCGGY | 2 cut(s) | 119, 245 |
| Cfr13I | GGNCC | 4 cut(s) | 122, 263, 449, 598 |
| Cfr42I | CCGCGG | 1 cut(s) | 429 |
| CseI | GACGC | 2 cut(s) | 353, 478 |
| Csp6I | GTAC | 7 cut(s) | 106, 295, 370, 682, 1134, 1410, 1983 |
| CspAI | ACCGGT | 1 cut(s) | 245 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1676, 1711 |
| CviAII | CATG | 6 cut(s) | 553, 754, 838, 929, 1103, 2101 |
| CviQI | GTAC | 7 cut(s) | 106, 295, 370, 682, 1134, 1410, 1983 |
| DdeI | CTNAG | 8 cut(s) | 267, 504, 530, 690, 1283, 1309, 1356, 1908 |
| DpnI | GATC | 8 cut(s) | 330, 672, 784, 1053, 1553, 1728, 1821, 1856 |
| DpnII | GATC | 8 cut(s) | 328, 670, 782, 1051, 1551, 1726, 1819, 1854 |
| DraIII | CACNNNGTG | 1 cut(s) | 1115 |
| Eam1104I | CTCTTC | 3 cut(s) | 837, 1505, 1516 |
| EarI | CTCTTC | 3 cut(s) | 837, 1505, 1516 |
| EciI | GGCGGA | 3 cut(s) | 46, 106, 479 |
| Ecl136II | GAGCTC | 4 cut(s) | 361, 1022, 1081, 1371 |
| Eco130I | CCWWGG | 1 cut(s) | 205 |
| Eco147I | AGGCCT | 1 cut(s) | 658 |
| Eco24I | GRGCYC | 5 cut(s) | 213, 363, 1024, 1083, 1373 |
| Eco31I | GGTCTC | 1 cut(s) | 1084 |
| Eco32I | GATATC | 1 cut(s) | 1666 |
| Eco47I | GGWCC | 2 cut(s) | 449, 598 |
| Eco53kI | GAGCTC | 4 cut(s) | 361, 1022, 1081, 1371 |
| Eco57I | CTGAAG | 5 cut(s) | 269, 293, 1968, 2039, 2058 |
| Eco88I | CYCGRG | 4 cut(s) | 214, 223, 301, 356 |
| Eco91I | GGTNACC | 1 cut(s) | 436 |
| EcoICRI | GAGCTC | 4 cut(s) | 361, 1022, 1081, 1371 |
| EcoO109I | RGGNCCY | 1 cut(s) | 598 |
| EcoO65I | GGTNACC | 1 cut(s) | 436 |
| EcoRI | GAATTC | 1 cut(s) | 794 |
| EcoRII | CCWGG | 2 cut(s) | 609, 1567 |
| EcoRV | GATATC | 1 cut(s) | 1666 |
| EcoT14I | CCWWGG | 1 cut(s) | 205 |
| EcoT22I | ATGCAT | 1 cut(s) | 1642 |
| EcoT38I | GRGCYC | 5 cut(s) | 213, 363, 1024, 1083, 1373 |
| ErhI | CCWWGG | 1 cut(s) | 205 |
| Esp3I | CGTCTC | 1 cut(s) | 461 |
| FaeI | CATG | 6 cut(s) | 556, 757, 841, 932, 1106, 2104 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1067, 1099 |
| FaqI | GGGAC | 4 cut(s) | 541, 611, 827, 1716 |
| FatI | CATG | 6 cut(s) | 552, 753, 837, 928, 1102, 2100 |
| FauI | CCCGC | 4 cut(s) | 492, 833, 1426, 1743 |
| FbaI | TGATCA | 1 cut(s) | 1854 |
| FblI | GTMKAC | 3 cut(s) | 177, 761, 1474 |
| Fnu4HI | GCNGC | 7 cut(s) | 278, 281, 291, 473, 1314, 1347, 1350 |
| FokI | GGATG | 4 cut(s) | 822, 847, 995, 1061 |
| FriOI | GRGCYC | 5 cut(s) | 213, 363, 1024, 1083, 1373 |
| Fsp4HI | GCNGC | 7 cut(s) | 278, 281, 291, 473, 1314, 1347, 1350 |
| FspBI | CTAG | 4 cut(s) | 206, 621, 1205, 1320 |
| GluI | GCNGC | 7 cut(s) | 278, 281, 291, 473, 1314, 1347, 1350 |
| GsuI | CTGGAG | 4 cut(s) | 632, 1488, 1808, 2130 |
| HaeIII | GGCC | 4 cut(s) | 123, 204, 264, 658 |
| HapII | CCGG | 7 cut(s) | 120, 246, 674, 699, 1055, 1113, 1366 |
| HgaI | GACGC | 2 cut(s) | 353, 478 |
| Hin1I | GRCGYC | 1 cut(s) | 345 |
| Hin1II | CATG | 6 cut(s) | 556, 757, 841, 932, 1106, 2104 |
| HincII | GTYRAC | 2 cut(s) | 178, 1423 |
| HindII | GTYRAC | 2 cut(s) | 178, 1423 |
| HindIII | AAGCTT | 3 cut(s) | 336, 1306, 1590 |
| HinfI | GANTC | 5 cut(s) | 150, 228, 925, 1165, 1232 |
| HpaII | CCGG | 7 cut(s) | 120, 246, 674, 699, 1055, 1113, 1366 |
| HphI | GGTGA | 8 cut(s) | 79, 124, 269, 448, 1290, 1348, 1592, 1663 |
| Hpy166II | GTNNAC | 7 cut(s) | 178, 762, 1412, 1423, 1475, 1966, 2080 |
| Hpy8I | GTNNAC | 7 cut(s) | 178, 762, 1412, 1423, 1475, 1966, 2080 |
| Hpy99I | CGWCG | 9 cut(s) | 179, 188, 191, 194, 347, 457, 1262, 1626, 1629 |
| HpyAV | CCTTC | 6 cut(s) | 717, 751, 1036, 1264, 1693, 1727 |
| HpyCH4IV | ACGT | 2 cut(s) | 372, 1477 |
| HpyF3I | CTNAG | 8 cut(s) | 267, 504, 530, 690, 1283, 1309, 1356, 1908 |
| HpySE526I | ACGT | 2 cut(s) | 372, 1477 |
| Hsp92I | GRCGYC | 1 cut(s) | 345 |
| Hsp92II | CATG | 6 cut(s) | 556, 757, 841, 932, 1106, 2104 |
| Kpn2I | TCCGGA | 1 cut(s) | 1365 |
| KroI | GCCGGC | 1 cut(s) | 119 |
| KroNI | GCCGGC | 1 cut(s) | 121 |
| Ksp22I | TGATCA | 1 cut(s) | 1854 |
| KspI | CCGCGG | 1 cut(s) | 429 |
| Kzo9I | GATC | 8 cut(s) | 328, 670, 782, 1051, 1551, 1726, 1819, 1854 |
| LguI | GCTCTTC | 2 cut(s) | 1505, 1516 |
| Lsp1109I | GCAGC | 5 cut(s) | 267, 459, 1325, 1336, 1358 |
| LweI | GCATC | 1 cut(s) | 1627 |
| MaeI | CTAG | 4 cut(s) | 206, 621, 1205, 1320 |
| MaeII | ACGT | 2 cut(s) | 372, 1477 |
| MaeIII | GTNAC | 7 cut(s) | 257, 436, 726, 1105, 1397, 1563, 1970 |
| MalI | GATC | 8 cut(s) | 330, 672, 784, 1053, 1553, 1728, 1821, 1856 |
| MboI | GATC | 8 cut(s) | 328, 670, 782, 1051, 1551, 1726, 1819, 1854 |
| MfeI | CAATTG | 2 cut(s) | 1978, 2039 |
| MflI | RGATCY | 1 cut(s) | 1819 |
| MhlI | GDGCHC | 8 cut(s) | 213, 363, 618, 917, 1024, 1083, 1373, 1968 |
| MluI | ACGCGT | 1 cut(s) | 396 |
| MmeI | TCCRAC | 3 cut(s) | 366, 400, 476 |
| Mph1103I | ATGCAT | 1 cut(s) | 1642 |
| MroI | TCCGGA | 1 cut(s) | 1365 |
| MroNI | GCCGGC | 1 cut(s) | 119 |
| MseI | TTAA | 5 cut(s) | 525, 978, 1643, 1740, 1755 |
| MslI | CAYNNNNRTG | 1 cut(s) | 920 |
| MspA1I | CMGCKG | 4 cut(s) | 271, 428, 1349, 1466 |
| MspI | CCGG | 7 cut(s) | 120, 246, 674, 699, 1055, 1113, 1366 |
| MspR9I | CCNGG | 4 cut(s) | 611, 675, 1113, 1569 |
| MunI | CAATTG | 2 cut(s) | 1978, 2039 |
| Mva1269I | GAATGC | 1 cut(s) | 412 |
| MvaI | CCWGG | 2 cut(s) | 611, 1569 |
| MvnI | CGCG | 4 cut(s) | 398, 428, 443, 479 |
| NaeI | GCCGGC | 1 cut(s) | 121 |
| NciI | CCSGG | 2 cut(s) | 675, 1113 |
| NdeII | GATC | 8 cut(s) | 328, 670, 782, 1051, 1551, 1726, 1819, 1854 |
| NgoMIV | GCCGGC | 1 cut(s) | 119 |
| NlaIII | CATG | 6 cut(s) | 556, 757, 841, 932, 1106, 2104 |
| NlaIV | GGNNCC | 8 cut(s) | 124, 212, 221, 424, 599, 1251, 2033, 2116 |
| NmeAIII | GCCGAG | 3 cut(s) | 373, 618, 1726 |
| NmuCI | GTSAC | 5 cut(s) | 257, 436, 726, 1397, 1970 |
| NsiI | ATGCAT | 1 cut(s) | 1642 |
| NspI | RCATGY | 1 cut(s) | 1106 |
| OliI | CACNNNNGTG | 1 cut(s) | 920 |
| PaeR7I | CTCGAG | 1 cut(s) | 356 |
| PagI | TCATGA | 1 cut(s) | 928 |
| PceI | AGGCCT | 1 cut(s) | 658 |
| PciI | ACATGT | 1 cut(s) | 1102 |
| PciSI | GCTCTTC | 2 cut(s) | 1505, 1516 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 180, 183, 369, 378 |
| PctI | GAATGC | 1 cut(s) | 412 |
| PdiI | GCCGGC | 1 cut(s) | 121 |
| PfeI | GAWTC | 5 cut(s) | 150, 228, 925, 1165, 1232 |
| PfoI | TCCNGGA | 1 cut(s) | 609 |
| PinAI | ACCGGT | 1 cut(s) | 245 |
| PkrI | GCNGC | 7 cut(s) | 279, 282, 292, 474, 1315, 1348, 1351 |
| PpuMI | RGGWCCY | 1 cut(s) | 598 |
| PscI | ACATGT | 1 cut(s) | 1102 |
| PshBI | ATTAAT | 1 cut(s) | 525 |
| PsiI | TTATAA | 1 cut(s) | 665 |
| Psp124BI | GAGCTC | 4 cut(s) | 363, 1024, 1083, 1373 |
| Psp5II | RGGWCCY | 1 cut(s) | 598 |
| Psp6I | CCWGG | 2 cut(s) | 609, 1567 |
| PspEI | GGTNACC | 1 cut(s) | 436 |
| PspGI | CCWGG | 2 cut(s) | 609, 1567 |
| PspN4I | GGNNCC | 8 cut(s) | 124, 212, 221, 424, 599, 1251, 2033, 2116 |
| PspPI | GGNCC | 4 cut(s) | 122, 263, 449, 598 |
| PspPPI | RGGWCCY | 1 cut(s) | 598 |
| PspXI | VCTCGAGB | 1 cut(s) | 356 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1175 |
| PsuI | RGATCY | 1 cut(s) | 1819 |
| PvuII | CAGCTG | 3 cut(s) | 271, 1349, 1466 |
| RsaI | GTAC | 7 cut(s) | 107, 296, 371, 683, 1135, 1411, 1984 |
| RsaNI | GTAC | 7 cut(s) | 106, 295, 370, 682, 1134, 1410, 1983 |
| RseI | CAYNNNNRTG | 1 cut(s) | 920 |
| SacI | GAGCTC | 4 cut(s) | 363, 1024, 1083, 1373 |
| SacII | CCGCGG | 1 cut(s) | 429 |
| SalI | GTCGAC | 1 cut(s) | 176 |
| SapI | GCTCTTC | 2 cut(s) | 1505, 1516 |
| SaqAI | TTAA | 5 cut(s) | 525, 978, 1643, 1740, 1755 |
| SatI | GCNGC | 7 cut(s) | 278, 281, 291, 473, 1314, 1347, 1350 |
| Sau3AI | GATC | 8 cut(s) | 328, 670, 782, 1051, 1551, 1726, 1819, 1854 |
| Sau96I | GGNCC | 4 cut(s) | 122, 263, 449, 598 |
| ScaI | AGTACT | 1 cut(s) | 107 |
| ScrFI | CCNGG | 4 cut(s) | 611, 675, 1113, 1569 |
| SduI | GDGCHC | 8 cut(s) | 213, 363, 618, 917, 1024, 1083, 1373, 1968 |
| SfaNI | GCATC | 1 cut(s) | 1627 |
| SfcI | CTRYAG | 1 cut(s) | 762 |
| Sfr274I | CTCGAG | 1 cut(s) | 356 |
| Sfr303I | CCGCGG | 1 cut(s) | 429 |
| SgrBI | CCGCGG | 1 cut(s) | 429 |
| SinI | GGWCC | 2 cut(s) | 449, 598 |
| SlaI | CTCGAG | 1 cut(s) | 356 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 920 |
| SmlI | CTYRAG | 3 cut(s) | 356, 494, 1084 |
| SmoI | CTYRAG | 3 cut(s) | 356, 494, 1084 |
| SseBI | AGGCCT | 1 cut(s) | 658 |
| SspI | AATATT | 1 cut(s) | 628 |
| SspMI | CTAG | 4 cut(s) | 206, 621, 1205, 1320 |
| SstI | GAGCTC | 4 cut(s) | 363, 1024, 1083, 1373 |
| StuI | AGGCCT | 1 cut(s) | 658 |
| StyD4I | CCNGG | 4 cut(s) | 609, 673, 1111, 1567 |
| StyI | CCWWGG | 1 cut(s) | 205 |
| TaiI | ACGT | 2 cut(s) | 375, 1480 |
| TaqI | TCGA | 4 cut(s) | 177, 327, 357, 1230 |
| TaqII | GACCGA | 1 cut(s) | 180 |
| TatI | WGTACW | 3 cut(s) | 105, 1133, 1409 |
| TauI | GCSGC | 2 cut(s) | 280, 293 |
| TfiI | GAWTC | 5 cut(s) | 150, 228, 925, 1165, 1232 |
| Tru1I | TTAA | 5 cut(s) | 525, 978, 1643, 1740, 1755 |
| Tru9I | TTAA | 5 cut(s) | 525, 978, 1643, 1740, 1755 |
| TscAI | CASTG | 8 cut(s) | 538, 735, 889, 993, 1176, 1492, 1700, 1973 |
| TseFI | GTSAC | 5 cut(s) | 257, 436, 726, 1397, 1970 |
| TseI | GCWGC | 5 cut(s) | 280, 472, 1313, 1346, 1349 |
| Tsp45I | GTSAC | 5 cut(s) | 257, 436, 726, 1397, 1970 |
| TspDTI | ATGAA | 4 cut(s) | 17, 407, 573, 742 |
| TspGWI | ACGGA | 1 cut(s) | 881 |
| TspRI | CASTG | 8 cut(s) | 538, 735, 889, 993, 1176, 1492, 1700, 1973 |
| VneI | GTGCAC | 1 cut(s) | 1964 |
| VpaK11BI | GGWCC | 2 cut(s) | 449, 598 |
| VspI | ATTAAT | 1 cut(s) | 525 |
| XapI | RAATTY | 3 cut(s) | 794, 1240, 1572 |
| XbaI | TCTAGA | 1 cut(s) | 1319 |
| XceI | RCATGY | 1 cut(s) | 1106 |
| XhoI | CTCGAG | 1 cut(s) | 356 |
| XmaJI | CCTAGG | 1 cut(s) | 205 |
| XmiI | GTMKAC | 3 cut(s) | 177, 761, 1474 |
| XspI | CTAG | 4 cut(s) | 206, 621, 1205, 1320 |
| ZrmI | AGTACT | 1 cut(s) | 107 |
| Zsp2I | ATGCAT | 1 cut(s) | 1642 |