Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0006506

Physical Location & Seq

Genomic Coordinates Forward (+)

6516657 .. 6518022

Gene Structure 1366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0084000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1212 bp

ATGTATAGGATAGTGCGGTACCATACGAGAAAGCCGAAGAGCTTGTTGTTGCCTTTGGCATGGCAAGTGGCGACGAAAACGACGACGTCCGGTTCAGAACCATCCCCGTTAGCTTCACTGTCGTGGAAGACTCGGCTGGCGTTGACGCTACTGCCAAAGGTCGACAAGGCCGCTCGTCGCCCTGACGGCACCGTCAACCGCCGTCTCCTAAACCTCGTCGACCCCAAGGCCTCACCAAAGTCCAGAAACGGCGTCACCTCCTCCGACGTCATCGTCGACCCCACTCGCAATCTCTGGTTCCGGCTCTTCATCCCGGTCGTCGATATCGACTCCACCGCTCTTCCCGTCGTGATTTACTTTCACGGCGGTGGCTTCACGACCAACAGCCCCTCCTCGATTGCCTACGACGCCTTCTGCCGTAGGTTCGCCGCCACAATCCCCGCCGTCGTAGTTTCCGTCAACTACCGTCTCTCTCCGGAGCACCGCTACCCTTCCCAATGCGACGACGGGTTCGACGTCGTGTCCTTCCTCGGCCAAAACGACGCCGTCCTCCCCAAAAACGCAGACAGATCCCGGATCTTCCTGGCCGGGGACAGCGCCGGAGGGAACCTGGCCCACCACGTGGCCGTACGCGCCTGTCGGTGTCGGACAGTCAAGTTGGCCGGGTTGGTATCTATCCAACCGTTCTTCGGCGGCGAGGAGCGGACCGAGTCCGAGATCCGGCTCGCGAAGGATCCATTGGTCACGGTGACCCTAACCGACTGGTTGTGGAAGGCGTTTCTGCCGGTCGGGTCGACCCGGGACCATGAGGTGGCGAACGTGAGCGGGCCGAACGCGGTGGACATTTCGGGTATGGAGTATCCGGCGACGGTGGTGTTCGTGGGAGGGGCGGATCCGCTGCAGGACTGGCAGAGGAGGTACTATAATTGGTTGAGGAAATCAGGGATTGAGGCCAAGCTGATCGAGTATCCCAATATGTTTCATGGCTTCTATGCTTTTCCAGAGTTGCCCGAGTCGGACCAACTGGAAAAGCCAACATGCTGCTGTAATAAAGCTCCTGTAACTGAAGAAGTCAGGGGTGCAGGGGAGAAGACTCAAATTTTTGATGCTAAAATAGTGGAAAGCTTTGGGGCTGAGAAGACTGGAGGCTGCCGTGGAGTGGTTCCTTTGTGCTGCTCACTCGCAGCTCGTGCCTTGTATGCTGCCGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000082 GO:0000278 GO:0000981 GO:0003674 GO:0003700 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006355 GO:0006357 GO:0006725 GO:0006807 GO:0007049 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009889 GO:0009987 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022402 GO:0031323 GO:0031326 GO:0034641 GO:0034645 GO:0042023 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044424 GO:0044464 GO:0044770 GO:0044772 GO:0044786 GO:0044843 GO:0046483 GO:0046982 GO:0046983 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0140110 GO:1901360 GO:1901576 GO:1903047 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04110 ko04350 map04110 map04350

Pfam Domains

Protein Families

DP E2F_TDP

Protein Analysis

403

Amino Acids

44.32

Weight (kDa)

8.83

Isoelectric Point (pI)

44.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
COesterase	PF00135	104 - 158	2.6e-07	Carboxylesterase family
BD-FAE	PF20434	111 - 210	2.9e-15	BD-FAE
Abhydrolase_3	PF07859	117 - 331	1.1e-59	alpha/beta hydrolase fold

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006506)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02470 AT5G02470 AT5G02470
fragaria_vesca	FvH4_6g14010 FvH4_6g14010 FvH4_6g14010 FvH4_6g14010 FvH4_6g14010 FvH4_6g14010 FvH4_6g14010
malus_domestica	MD04G1126400.v1.1
prunus_persica	Prupe.6G253200_v2.0.a1 Prupe.6G253200_v2.0.a1
pyrus_communis	pycom04g11340
rosa_chinensis	RchiOBHm_Chr3g0466841
rosa_laevigata	RLG00000024547
rosa_multiflora	Rmu_sc0026100.1_g000001
rosa_roxburghii	Rroxscaffold_6G00414090
rosa_rugosa	Rorug03G0083900 Rorug03G0084000 Rorug03G0084100
rosa_samantha	Rh3AG131700 Rh3BG152800 Rh3CG153000 Rh3DG153900
rosa_wichuraiana	Rw3G012450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	191, 272
AatII	GACGTC	3 cut(s)	89, 270, 519
Acc65I	GGTACC	1 cut(s)	18
AccB1I	GGYRCC	2 cut(s)	18, 188
AccB7I	CCANNNNNTGG	2 cut(s)	622, 811
AccBSI	CCGCTC	4 cut(s)	173, 338, 703, 825
AccI	GTMKAC	4 cut(s)	162, 219, 276, 794
AccII	CGCG	3 cut(s)	633, 728, 836
AccIII	TCCGGA	1 cut(s)	475
AclWI	GGATC	7 cut(s)	564, 584, 712, 728, 741, 887, 900
AcoI	YGGCCR	4 cut(s)	532, 585, 624, 660
AcsI	RAATTY	1 cut(s)	1098
AcuI	CTGAAG	1 cut(s)	1086
AcvI	CACGTG	1 cut(s)	622
AcyI	GRCGYC	6 cut(s)	86, 252, 267, 408, 516, 543
AdeI	CACNNNGTG	1 cut(s)	622
AfaI	GTAC	3 cut(s)	20, 630, 920
AfiI	CCNNNNNNNGG	6 cut(s)	589, 622, 689, 720, 811, 1159
AhdI	GACNNNNNGTC	1 cut(s)	520
AjnI	CCWGG	2 cut(s)	582, 609
AjuI	GAANNNNNNNTTGG	2 cut(s)	722, 754
AleI	CACNNNNGTG	2 cut(s)	121, 366
AluBI	AGCT	6 cut(s)	42, 113, 958, 1055, 1125, 1187
AluI	AGCT	6 cut(s)	42, 113, 958, 1055, 1125, 1187
Alw21I	GWGCWC	1 cut(s)	483
Alw26I	GTCTC	2 cut(s)	209, 473
AlwI	GGATC	7 cut(s)	564, 584, 712, 728, 741, 887, 900
Ama87I	CYCGRG	2 cut(s)	798, 1010
Aor13HI	TCCGGA	1 cut(s)	475
AoxI	GGCC	9 cut(s)	168, 228, 532, 585, 612, 624, 660, 827, 951
ApeKI	GCWGC	6 cut(s)	898, 1041, 1149, 1173, 1184, 1202
ApoI	RAATTY	1 cut(s)	1098
ArsI	GACNNNNNNTTYG	2 cut(s)	494, 526
Asp718I	GGTACC	1 cut(s)	18
AspLEI	GCGC	2 cut(s)	599, 635
AspS9I	GGNCC	5 cut(s)	613, 705, 802, 827, 1018
AsuC2I	CCSGG	6 cut(s)	314, 574, 589, 664, 799, 800
AsuHPI	GGTGA	3 cut(s)	225, 247, 760
AvaI	CYCGRG	2 cut(s)	798, 1010
AvaII	GGWCC	3 cut(s)	705, 802, 1018
BamHI	GGATCC	2 cut(s)	733, 892
BanI	GGYRCC	2 cut(s)	18, 188
BauI	CACGAG	1 cut(s)	1188
BbrPI	CACGTG	1 cut(s)	622
BbsI	GAAGAC	3 cut(s)	134, 1097, 1145
Bbv12I	GWGCWC	1 cut(s)	483
BbvI	GCAGC	6 cut(s)	885, 1028, 1136, 1160, 1189, 1196
BccI	CCATC	1 cut(s)	109
BceAI	ACGGC	9 cut(s)	186, 202, 265, 379, 402, 428, 530, 611, 1137
BciT130I	CCWGG	2 cut(s)	584, 611
BciVI	GTATCC	2 cut(s)	870, 978
BcnI	CCSGG	6 cut(s)	314, 574, 589, 664, 799, 800
BcoDI	GTCTC	2 cut(s)	209, 473
BfmI	CTRYAG	1 cut(s)	899
BfoI	RGCGCY	1 cut(s)	600
BfuI	GTATCC	2 cut(s)	870, 978
BglI	GCCNNNNNGGC	1 cut(s)	186
BisI	GCNGC	9 cut(s)	171, 429, 694, 899, 1042, 1150, 1174, 1185, 1203
BlsI	GCNGC	9 cut(s)	172, 430, 695, 900, 1043, 1151, 1175, 1186, 1204
Bme1390I	CCNGG	8 cut(s)	314, 574, 584, 589, 611, 664, 799, 800
Bme18I	GGWCC	3 cut(s)	705, 802, 1018
BmeRI	GACNNNNNGTC	1 cut(s)	520
BmeT110I	CYCGRG	2 cut(s)	798, 1010
BmgT120I	GGNCC	5 cut(s)	613, 705, 802, 827, 1018
BmiI	GGNNCC	8 cut(s)	20, 190, 299, 608, 735, 803, 894, 1164
BmrFI	CCNGG	8 cut(s)	314, 574, 584, 589, 611, 664, 799, 800
BmsI	GCATC	1 cut(s)	1096
BpiI	GAAGAC	3 cut(s)	134, 1097, 1145
BpmI	CTGGAG	1 cut(s)	1164
BpuMI	CCSGG	6 cut(s)	314, 574, 589, 664, 799, 800
BsaAI	YACGTR	1 cut(s)	622
BsaHI	GRCGYC	6 cut(s)	86, 252, 267, 408, 516, 543
BsaJI	CCNNGG	5 cut(s)	225, 529, 588, 798, 1153
BsaWI	WCCGGW	2 cut(s)	89, 475
BsaXI	ACNNNNNCTCC	2 cut(s)	374, 404
Bsc4I	CCNNNNNNNGG	6 cut(s)	589, 622, 689, 720, 811, 1159
Bse118I	RCCGGY	1 cut(s)	784
Bse1I	ACTGG	4 cut(s)	767, 911, 1029, 1147
BseAI	TCCGGA	1 cut(s)	475
BseBI	CCWGG	2 cut(s)	584, 611
BseDI	CCNNGG	5 cut(s)	225, 529, 588, 798, 1153
BseGI	GGATG	2 cut(s)	101, 309
BseLI	CCNNNNNNNGG	6 cut(s)	589, 622, 689, 720, 811, 1159
BseMII	CTCAG	1 cut(s)	1125
BseNI	ACTGG	4 cut(s)	767, 911, 1029, 1147
BseRI	GAGGAG	4 cut(s)	250, 382, 713, 928
BseXI	GCAGC	6 cut(s)	885, 1028, 1136, 1160, 1189, 1196
BsgI	GTGCAG	1 cut(s)	1101
Bsh1236I	CGCG	3 cut(s)	633, 728, 836
Bsh1285I	CGRYCG	2 cut(s)	318, 789
BshFI	GGCC	9 cut(s)	170, 230, 534, 587, 614, 626, 662, 829, 953
BshNI	GGYRCC	2 cut(s)	18, 188
BsiEI	CGRYCG	2 cut(s)	318, 789
BsiHKAI	GWGCWC	1 cut(s)	483
BsiHKCI	CYCGRG	2 cut(s)	798, 1010
BsiWI	CGTACG	1 cut(s)	628
BslFI	GGGAC	2 cut(s)	605, 815
BslI	CCNNNNNNNGG	6 cut(s)	589, 622, 689, 720, 811, 1159
BsmAI	GTCTC	2 cut(s)	209, 473
BsmBI	CGTCTC	2 cut(s)	209, 473
BsmFI	GGGAC	2 cut(s)	605, 815
BsnI	GGCC	9 cut(s)	170, 230, 534, 587, 614, 626, 662, 829, 953
BsoBI	CYCGRG	2 cut(s)	798, 1010
Bsp1286I	GDGCHC	1 cut(s)	483
Bsp13I	TCCGGA	1 cut(s)	475
Bsp143I	GATC	6 cut(s)	569, 576, 717, 733, 892, 960
Bsp68I	TCGCGA	1 cut(s)	728
BspANI	GGCC	9 cut(s)	170, 230, 534, 587, 614, 626, 662, 829, 953
BspCNI	CTCAG	1 cut(s)	1126
BspEI	TCCGGA	1 cut(s)	475
BspFNI	CGCG	3 cut(s)	633, 728, 836
BspLI	GGNNCC	8 cut(s)	20, 190, 299, 608, 735, 803, 894, 1164
BspMAI	CTGCAG	1 cut(s)	903
BspPI	GGATC	7 cut(s)	564, 584, 712, 728, 741, 887, 900
BspQI	GCTCTTC	3 cut(s)	32, 311, 345
BspT107I	GGYRCC	2 cut(s)	18, 188
BsrBI	CCGCTC	4 cut(s)	173, 338, 703, 825
BsrFI	RCCGGY	1 cut(s)	784
BsrI	ACTGG	4 cut(s)	767, 911, 1029, 1147
BssAI	RCCGGY	1 cut(s)	784
BssECI	CCNNGG	5 cut(s)	225, 529, 588, 798, 1153
BssMI	GATC	6 cut(s)	569, 576, 717, 733, 892, 960
BssNI	GRCGYC	6 cut(s)	86, 252, 267, 408, 516, 543
BssSI	CACGAG	1 cut(s)	1188
BssT1I	CCWWGG	1 cut(s)	225
Bst2BI	CACGAG	1 cut(s)	1188
Bst2UI	CCWGG	2 cut(s)	584, 611
Bst4CI	ACNGT	7 cut(s)	120, 193, 467, 652, 684, 748, 871
Bst6I	CTCTTC	3 cut(s)	32, 311, 345
BstACI	GRCGYC	6 cut(s)	86, 252, 267, 408, 516, 543
BstAPI	GCANNNNNTGC	1 cut(s)	1190
BstBAI	YACGTR	1 cut(s)	622
BstC8I	GCNNGC	3 cut(s)	138, 726, 827
BstDEI	CTNAG	1 cut(s)	1134
BstDSI	CCRYGG	1 cut(s)	1153
BstEII	GGTNACC	1 cut(s)	748
BstF5I	GGATG	2 cut(s)	101, 309
BstFNI	CGCG	3 cut(s)	633, 728, 836
BstH2I	RGCGCY	1 cut(s)	600
BstHHI	GCGC	2 cut(s)	599, 635
BstKTI	GATC	6 cut(s)	572, 579, 720, 736, 895, 963
BstMAI	GTCTC	2 cut(s)	209, 473
BstMBI	GATC	6 cut(s)	569, 576, 717, 733, 892, 960
BstMCI	CGRYCG	2 cut(s)	318, 789
BstMWI	GCNNNNNNNGC	6 cut(s)	186, 407, 632, 907, 1190, 1199
BstNI	CCWGG	2 cut(s)	584, 611
BstNSI	RCATGY	1 cut(s)	1041
BstPI	GGTNACC	1 cut(s)	748
BstSCI	CCNGG	8 cut(s)	312, 572, 582, 587, 609, 662, 797, 798
BstSFI	CTRYAG	1 cut(s)	899
BstUI	CGCG	3 cut(s)	633, 728, 836
BstV1I	GCAGC	6 cut(s)	885, 1028, 1136, 1160, 1189, 1196
BstV2I	GAAGAC	3 cut(s)	134, 1097, 1145
BstX2I	RGATCY	5 cut(s)	569, 576, 717, 733, 892
BstYI	RGATCY	5 cut(s)	569, 576, 717, 733, 892
BsuI	GTATCC	2 cut(s)	870, 978
BsuRI	GGCC	9 cut(s)	170, 230, 534, 587, 614, 626, 662, 829, 953
BtgI	CCRYGG	1 cut(s)	1153
BtsCI	GGATG	2 cut(s)	101, 309
BtsIMutI	CAGTG	1 cut(s)	116
BtuMI	TCGCGA	1 cut(s)	728
Cac8I	GCNNGC	3 cut(s)	138, 726, 827
CfoI	GCGC	2 cut(s)	599, 635
Cfr10I	RCCGGY	1 cut(s)	784
Cfr13I	GGNCC	5 cut(s)	613, 705, 802, 827, 1018
Cfr9I	CCCGGG	1 cut(s)	798
CpoI	CGGWCCG	1 cut(s)	705
CseI	GACGC	4 cut(s)	154, 241, 416, 551
Csp6I	GTAC	3 cut(s)	19, 629, 919
CspI	CGGWCCG	1 cut(s)	705
CviAII	CATG	4 cut(s)	60, 806, 983, 1038
CviQI	GTAC	3 cut(s)	19, 629, 919
DdeI	CTNAG	1 cut(s)	1134
DpnI	GATC	6 cut(s)	571, 578, 719, 735, 894, 962
DpnII	GATC	6 cut(s)	569, 576, 717, 733, 892, 960
DraIII	CACNNNGTG	1 cut(s)	622
DrdI	GACNNNNNNGTC	2 cut(s)	191, 272
DriI	GACNNNNNGTC	1 cut(s)	520
DseDI	GACNNNNNNGTC	2 cut(s)	191, 272
EaeI	YGGCCR	4 cut(s)	532, 585, 624, 660
Eam1104I	CTCTTC	3 cut(s)	32, 311, 345
Eam1105I	GACNNNNNGTC	1 cut(s)	520
EarI	CTCTTC	3 cut(s)	32, 311, 345
EciI	GGCGGA	1 cut(s)	905
Eco130I	CCWWGG	1 cut(s)	225
Eco147I	AGGCCT	1 cut(s)	230
Eco32I	GATATC	1 cut(s)	325
Eco47I	GGWCC	3 cut(s)	705, 802, 1018
Eco57I	CTGAAG	1 cut(s)	1086
Eco72I	CACGTG	1 cut(s)	622
Eco88I	CYCGRG	2 cut(s)	798, 1010
Eco91I	GGTNACC	1 cut(s)	748
EcoO65I	GGTNACC	1 cut(s)	748
EcoRII	CCWGG	2 cut(s)	582, 609
EcoRV	GATATC	1 cut(s)	325
EcoT14I	CCWWGG	1 cut(s)	225
ErhI	CCWWGG	1 cut(s)	225
Esp3I	CGTCTC	2 cut(s)	209, 473
FaeI	CATG	4 cut(s)	63, 809, 986, 1041
FaqI	GGGAC	2 cut(s)	605, 815
FatI	CATG	4 cut(s)	59, 805, 982, 1037
FauI	CCCGC	2 cut(s)	448, 818
FblI	GTMKAC	4 cut(s)	162, 219, 276, 794
Fnu4HI	GCNGC	9 cut(s)	171, 429, 694, 899, 1042, 1150, 1174, 1185, 1203
FokI	GGATG	2 cut(s)	88, 296
Fsp4HI	GCNGC	9 cut(s)	171, 429, 694, 899, 1042, 1150, 1174, 1185, 1203
GlaI	GCGC	2 cut(s)	598, 634
GluI	GCNGC	9 cut(s)	171, 429, 694, 899, 1042, 1150, 1174, 1185, 1203
GsuI	CTGGAG	1 cut(s)	1164
HaeII	RGCGCY	1 cut(s)	600
HaeIII	GGCC	9 cut(s)	170, 230, 534, 587, 614, 626, 662, 829, 953
HgaI	GACGC	4 cut(s)	154, 241, 416, 551
HhaI	GCGC	2 cut(s)	599, 635
Hin1I	GRCGYC	6 cut(s)	86, 252, 267, 408, 516, 543
Hin1II	CATG	4 cut(s)	63, 809, 986, 1041
Hin6I	GCGC	2 cut(s)	597, 633
HinP1I	GCGC	2 cut(s)	597, 633
HincII	GTYRAC	7 cut(s)	144, 163, 196, 220, 277, 460, 795
HindII	GTYRAC	7 cut(s)	144, 163, 196, 220, 277, 460, 795
HindIII	AAGCTT	1 cut(s)	1123
HinfI	GANTC	5 cut(s)	130, 329, 710, 1013, 1093
HphI	GGTGA	3 cut(s)	225, 247, 760
Hpy166II	GTNNAC	8 cut(s)	144, 163, 196, 220, 277, 460, 795, 841
Hpy188I	TCNGA	5 cut(s)	97, 265, 648, 715, 1018
Hpy188III	TCNNGA	6 cut(s)	243, 349, 376, 476, 727, 1001
Hpy8I	GTNNAC	8 cut(s)	144, 163, 196, 220, 277, 460, 795, 841
HpyAV	CCTTC	5 cut(s)	421, 501, 535, 724, 766
HpyCH4III	ACNGT	7 cut(s)	120, 193, 467, 652, 684, 748, 871
HpyCH4IV	ACGT	5 cut(s)	86, 267, 516, 621, 819
HpyCH4V	TGCA	2 cut(s)	901, 1082
HpyF10VI	GCNNNNNNNGC	6 cut(s)	186, 407, 632, 907, 1190, 1199
HpyF3I	CTNAG	1 cut(s)	1134
HpySE526I	ACGT	5 cut(s)	86, 267, 516, 621, 819
Hsp92I	GRCGYC	6 cut(s)	86, 252, 267, 408, 516, 543
Hsp92II	CATG	4 cut(s)	63, 809, 986, 1041
HspAI	GCGC	2 cut(s)	597, 633
Kpn2I	TCCGGA	1 cut(s)	475
KpnI	GGTACC	1 cut(s)	22
Kzo9I	GATC	6 cut(s)	569, 576, 717, 733, 892, 960
LguI	GCTCTTC	3 cut(s)	32, 311, 345
LmnI	GCTCC	3 cut(s)	478, 700, 1060
Lsp1109I	GCAGC	6 cut(s)	885, 1028, 1136, 1160, 1189, 1196
LweI	GCATC	1 cut(s)	1096
MaeII	ACGT	5 cut(s)	86, 267, 516, 621, 819
MaeIII	GTNAC	4 cut(s)	253, 742, 748, 1060
MalI	GATC	6 cut(s)	571, 578, 719, 735, 894, 962
MbiI	CCGCTC	4 cut(s)	173, 338, 703, 825
MboI	GATC	6 cut(s)	569, 576, 717, 733, 892, 960
MboII	GAAGA	9 cut(s)	49, 139, 298, 332, 571, 679, 1079, 1102, 1150
MflI	RGATCY	5 cut(s)	569, 576, 717, 733, 892
MhlI	GDGCHC	1 cut(s)	483
MluCI	AATT	2 cut(s)	925, 1098
MlyI	GAGTC	5 cut(s)	124, 323, 719, 1022, 1087
MmeI	TCCRAC	4 cut(s)	288, 626, 703, 996
MroI	TCCGGA	1 cut(s)	475
MseI	TTAA	1 cut(s)	1210
MslI	CAYNNNNRTG	2 cut(s)	121, 366
MspA1I	CMGCKG	1 cut(s)	898
MspR9I	CCNGG	8 cut(s)	314, 574, 584, 589, 611, 664, 799, 800
MvaI	CCWGG	2 cut(s)	584, 611
MvnI	CGCG	3 cut(s)	633, 728, 836
MwoI	GCNNNNNNNGC	6 cut(s)	186, 407, 632, 907, 1190, 1199
NciI	CCSGG	6 cut(s)	314, 574, 589, 664, 799, 800
NdeII	GATC	6 cut(s)	569, 576, 717, 733, 892, 960
NlaIII	CATG	4 cut(s)	63, 809, 986, 1041
NlaIV	GGNNCC	8 cut(s)	20, 190, 299, 608, 735, 803, 894, 1164
NmeAIII	GCCGAG	2 cut(s)	112, 510
NmuCI	GTSAC	3 cut(s)	253, 742, 748
NruI	TCGCGA	1 cut(s)	728
NspI	RCATGY	1 cut(s)	1041
OliI	CACNNNNGTG	2 cut(s)	121, 366
PceI	AGGCCT	1 cut(s)	230
PciSI	GCTCTTC	3 cut(s)	32, 311, 345
PcsI	WCGNNNNNNNCGW	8 cut(s)	32, 80, 273, 324, 453, 510, 513, 537
Pfl23II	CGTACG	1 cut(s)	628
PflFI	GACNNNGTC	3 cut(s)	85, 545, 709
PflMI	CCANNNNNTGG	2 cut(s)	622, 811
PfoI	TCCNGGA	1 cut(s)	572
PkrI	GCNGC	9 cut(s)	172, 430, 695, 900, 1043, 1151, 1175, 1186, 1204
PleI	GAGTC	5 cut(s)	124, 323, 718, 1021, 1087
PmaCI	CACGTG	1 cut(s)	622
PmlI	CACGTG	1 cut(s)	622
PpsI	GAGTC	5 cut(s)	124, 323, 718, 1021, 1087
Ppu21I	YACGTR	1 cut(s)	622
Psp6I	CCWGG	2 cut(s)	582, 609
PspCI	CACGTG	1 cut(s)	622
PspEI	GGTNACC	1 cut(s)	748
PspGI	CCWGG	2 cut(s)	582, 609
PspLI	CGTACG	1 cut(s)	628
PspN4I	GGNNCC	8 cut(s)	20, 190, 299, 608, 735, 803, 894, 1164
PspPI	GGNCC	5 cut(s)	613, 705, 802, 827, 1018
PstI	CTGCAG	1 cut(s)	903
PsuI	RGATCY	5 cut(s)	569, 576, 717, 733, 892
PsyI	GACNNNGTC	3 cut(s)	85, 545, 709
RruI	TCGCGA	1 cut(s)	728
RsaI	GTAC	3 cut(s)	20, 630, 920
RsaNI	GTAC	3 cut(s)	19, 629, 919
RseI	CAYNNNNRTG	2 cut(s)	121, 366
Rsr2I	CGGWCCG	1 cut(s)	705
RsrII	CGGWCCG	1 cut(s)	705
SalI	GTCGAC	4 cut(s)	161, 218, 275, 793
SapI	GCTCTTC	3 cut(s)	32, 311, 345
SaqAI	TTAA	1 cut(s)	1210
SatI	GCNGC	9 cut(s)	171, 429, 694, 899, 1042, 1150, 1174, 1185, 1203
Sau3AI	GATC	6 cut(s)	569, 576, 717, 733, 892, 960
Sau96I	GGNCC	5 cut(s)	613, 705, 802, 827, 1018
SchI	GAGTC	5 cut(s)	124, 323, 719, 1022, 1087
ScrFI	CCNGG	8 cut(s)	314, 574, 584, 589, 611, 664, 799, 800
SduI	GDGCHC	1 cut(s)	483
SfaNI	GCATC	1 cut(s)	1096
SfcI	CTRYAG	1 cut(s)	899
SinI	GGWCC	3 cut(s)	705, 802, 1018
SmaI	CCCGGG	1 cut(s)	800
SmiMI	CAYNNNNRTG	2 cut(s)	121, 366
Sse9I	AATT	2 cut(s)	925, 1098
SseBI	AGGCCT	1 cut(s)	230
StuI	AGGCCT	1 cut(s)	230
StyD4I	CCNGG	8 cut(s)	312, 572, 582, 587, 609, 662, 797, 798
StyI	CCWWGG	1 cut(s)	225
TaaI	ACNGT	7 cut(s)	120, 193, 467, 652, 684, 748, 871
TaiI	ACGT	5 cut(s)	89, 270, 519, 624, 822
TaqI	TCGA	9 cut(s)	162, 219, 276, 321, 327, 395, 513, 794, 963
TaqII	GACCGA	1 cut(s)	722
TasI	AATT	2 cut(s)	925, 1098
TauI	GCSGC	3 cut(s)	173, 431, 696
Tru1I	TTAA	1 cut(s)	1210
Tru9I	TTAA	1 cut(s)	1210
TscAI	CASTG	1 cut(s)	123
TseFI	GTSAC	3 cut(s)	253, 742, 748
TseI	GCWGC	6 cut(s)	898, 1041, 1149, 1173, 1184, 1202
Tsp45I	GTSAC	3 cut(s)	253, 742, 748
TspDTI	ATGAA	2 cut(s)	298, 971
TspGWI	ACGGA	1 cut(s)	445
TspMI	CCCGGG	1 cut(s)	798
TspRI	CASTG	1 cut(s)	123
Tth111I	GACNNNGTC	3 cut(s)	85, 545, 709
Van91I	CCANNNNNTGG	2 cut(s)	622, 811
VpaK11BI	GGWCC	3 cut(s)	705, 802, 1018
XapI	RAATTY	1 cut(s)	1098
XceI	RCATGY	1 cut(s)	1041
XmaI	CCCGGG	1 cut(s)	798
XmiI	GTMKAC	4 cut(s)	162, 219, 276, 794
ZraI	GACGTC	3 cut(s)	87, 268, 517

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.