RLG00000024754

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0013532
Physical Location & Seq
Forward (+)
38780539 .. 38782629
2091 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000024754

Sequence Viewer

Length: 2091 bp
ATGGTCGACTTCCCGAAATCCCTGTCCCCGAAGCGCGTCCTCAAGCTCCTCCAAGCCGAAAAGAACACCCACTCCGCACTCGCCCTCCTCGACTCCGCCACTCGCCACCCAAACTACACCCACTCGCCCGACGTCTTCCACCACATCCTCCGCCGCCTCATCCACCCCAACCTCGTCGCCCACGTCGCTCGGGTCGTCGAACTCATCCGCACCCAGAAATGCCACTGCCCCGAGGACGTGGCACTGACGGTGATCAAAGCCTACGCCAAAAACTCAATGCCTGATAAAGCCCTGCAAGTCTTCCAGCAAATGCGAGAGATTTTCGGGTGCGAGCCCGGCATTCGATCCTACAATTCTCTTCTAAACGCCTTCATTGAGTCCAACCAGTGGGACCGAGCCGAGCAGTTCTTTGCTTATTTCGAAACGGTGGGGTTGTCCCCAAATTTGCAGACGTACAACACTCTGATCAAGATTTCGTGCAAGAAGAAGCAGTTTGAGAAGGCCAGAGGGTTGCTGGATTGGATGTGGGAGAAGGGTTTGGAGCCTGATGTGATGAGTTACGGAACTTTGATCAATGCGTTTGTGAAAAGTGGGAAGCTGGGGGATGCATTGGAGGTGTTCGATGAAATGCCTGAGAGAGGAGTCAGTCCTGATGTCATGTGTTATAATATTTTGATTGATGGGTTTTTTCGGAAAGGCCAATATGTGGAGGCTAAGGAGGTTTGGGAGAGGTTGGTGCTGGACCCGGAGGCTTATCCGAATGTTGTTAGTTATAATGTTATGATTAGTGGTTTGTGCAAATGCGGGAGGTTTGGTGAGAGTTTGGAGATATGGAATAGGATGAAGAGGAATGAAAGAGGATGTGATTTGTTTACTTGTAGTTCTTTGATTCATGGGTTGTGTAAAGCGGGGAATGTGGATGAGGCGGAGAGAGTTTATAAGGATATGGTTGAGAAGGGAGTAGTGCCGGATGTGGTTATGTATAATGCAATGCTCGATGGTTTCTGCCGCGCAGGGAAGCTTGAACAGTGCTTTGAGTTGTGGGAGGTGATGGAGAAGGGTGGTTGTCGTAATGTTGTGAGTTATAACATATTGATCAAAGGGTTGTTTGAAAATAAGAAGGCAAAGGAAGCAATGTCTGTATGGGAATTAATGCATGAGAAGGCTTGTGTCGCAGATTCCACAACGTATGGAGTCTTAATTCATGGACTGTGTAAGAATGGTTACTTGAATAAGGCTCTATGGATTTTAAAAGAGGCGGAAAATGCAAGAGCTGATCTTGATGTCTTTGCATATTCCTCACTGATTAGTTGGTTATGCAAAGAAGGGAGGCTAGATGAAGCAGCCAGAATACTTGATCAGATGGTTAAGTGTGGCTATAAACCGAATTCTCATGTTTGCAATTCATTGATATATGGCTTTATCCAAGCTACCAAACTTGAAGATGCAATTTGCTTTTTTAGGGGAATGTCCACCAAGTATTGCTCTCCAAATGTTGTCTCCTACAATACTCTGATAAATGGCTTATGCAAAGTGGGAAGATTTAGTGACGCATATGTATTTGTGAGGGAAATGCTGGAGACAGGCTGGACACTAGATGTGATCACATATAGTTTGTTAATTGATGGGCTTTGTCAACGCAGGAAGATTGACATGGCCCTCAATTTGTGGAATCAAGCACTTGACAAGGGATTCGAACCTGATGTAACTATGTACAACATTATGGTTCATGGACTTTGCTCTGCAGGCAAAGCTGAAGGTGCTTTGCAGCTATATTTTCAGATGGGGTGTAGGAACTGTGTTCCGAATCTTGTGACACACAACACCCTAATGGAGGGTTTTTACAAAATTAGAGACTCTGGAAAGGCATCAGAAATTTGGGCTCGCATTTTAAAGAATGGGCTACAACCAGATATAATTTCCTATAATATTACTCTGAAAGGGCTTTGTTCATGCAGTAGAATATCAGATGCTGTTGGGTACTTAGAAAAAGCTTTGCATCATGGAGTTCTTCCAACTCATATAACGTGGCACATACTTGTTAGGGCAGTGGTCAACAATGGGGCCACTATGCAGTCTTCTTGGGGTTAA

Protein Analysis

697

Amino Acids

78.81

Weight (kDa)

7.86

Isoelectric Point (pI)

35.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_long PF17177 55 - 159 2.1e-07 Pentacotripeptide-repeat region of PRORP
TPR_24 PF23276 80 - 209 1.2e-07 Fungal tetratrico peptide repeats
PPR_2 PF13041 83 - 124 1.1e-06 PPR repeat family
PPR_3 PF13812 110 - 158 3.2e-07 Pentatricopeptide repeat domain
PPR_2 PF13041 112 - 157 5.4e-09 PPR repeat family
PPR_long PF17177 131 - 234 2.6e-09 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 147 - 196 7.3e-13 PPR repeat family
PPR_3 PF13812 171 - 227 3e-12 Pentatricopeptide repeat domain
PPR_1 PF12854 178 - 210 4.6e-10 PPR repeat
PPR_2 PF13041 182 - 230 4e-16 PPR repeat family
PPR PF01535 186 - 215 6.4e-08 PPR repeat
PPR_1 PF12854 213 - 244 3.5e-08 PPR repeat
PPR_1 PF12854 253 - 282 1.3e-08 PPR repeat
PPR_2 PF13041 253 - 302 9.6e-15 PPR repeat family
PPR PF01535 256 - 284 2e-08 PPR repeat
PPR_long PF17177 273 - 355 1.6e-06 Pentacotripeptide-repeat region of PRORP
PPR_3 PF13812 279 - 333 5.8e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 289 - 326 8.5e-10 PPR repeat family
PPR_1 PF12854 289 - 317 2.7e-08 PPR repeat
PPR PF01535 291 - 321 4.8e-09 PPR repeat
PPR_3 PF13812 311 - 367 2.2e-10 Pentatricopeptide repeat domain
PPR_1 PF12854 319 - 352 4.9e-11 PPR repeat
PPR_2 PF13041 323 - 356 8.6e-10 PPR repeat family
PPR PF01535 326 - 356 8e-08 PPR repeat
PPR_2 PF13041 357 - 406 6.9e-15 PPR repeat family
PPR_1 PF12854 390 - 419 2.4e-06 PPR repeat
PPR_1 PF12854 427 - 456 4.2e-09 PPR repeat
PPR_2 PF13041 428 - 474 2e-11 PPR repeat family
PPR PF01535 431 - 459 7.7e-07 PPR repeat
PPR_3 PF13812 450 - 507 1.6e-08 Pentatricopeptide repeat domain
PPR_2 PF13041 462 - 511 1.1e-12 PPR repeat family
PPR_1 PF12854 495 - 525 4.1e-13 PPR repeat
PPR_2 PF13041 497 - 546 9.4e-17 PPR repeat family
PPR PF01535 500 - 528 2.2e-06 PPR repeat
PPR_1 PF12854 532 - 559 7e-06 PPR repeat
PPR_2 PF13041 533 - 580 7.1e-13 PPR repeat family
PPR_3 PF13812 560 - 612 2.5e-06 Pentatricopeptide repeat domain
PPR_1 PF12854 563 - 595 7.9e-08 PPR repeat
PPR_2 PF13041 567 - 616 9.6e-13 PPR repeat family
PPR_3 PF13812 602 - 647 8.2e-06 Pentatricopeptide repeat domain
PPR_2 PF13041 605 - 650 1.1e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013532)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G09060 AT3G09060
fragaria_vesca FvH4_6g11981
malus_domestica MD04G1147200.v1.1 MD12G1160500.v1.1
prunus_persica Prupe.6G271000_v2.0.a1
pyrus_communis pycom12g15230
rosa_chinensis RchiOBHm_Chr3g0463821
rosa_laevigata RLG00000024754
rosa_multiflora Rmu_sc0004796.1_g000010
rosa_roxburghii Rroxscaffold_6G00416270
rosa_rugosa Rorug03G0068000 Rorug03G0068100
rosa_samantha Rh3AG125000 Rh3BG129300 Rh3CG131900 Rh3DG130400
rosa_wichuraiana Rw3G010560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 666, 774, 939, 1086
AatII GACGTC 1 cut(s) 135
AccB7I CCANNNNNTGG 2 cut(s) 387, 706
AccI GTMKAC 1 cut(s) 6
AccII CGCG 2 cut(s) 36, 1011
AclWI GGATC 1 cut(s) 339
AcsI RAATTY 3 cut(s) 442, 1387, 1875
AcuI CTGAAG 1 cut(s) 1776
AcyI GRCGYC 1 cut(s) 132
AfaI GTAC 3 cut(s) 455, 1715, 1982
AfiI CCNNNNNNNGG 4 cut(s) 387, 638, 706, 1834
AgsI TTSAA 4 cut(s) 1025, 1112, 1231, 1442
AjiI CACGTC 2 cut(s) 184, 238
AloI GAACNNNNNNTCC 2 cut(s) 56, 88
AluBI AGCT 8 cut(s) 46, 598, 1021, 1274, 1430, 1754, 1771, 1994
AluI AGCT 8 cut(s) 46, 598, 1021, 1274, 1430, 1754, 1771, 1994
Alw26I GTCTC 3 cut(s) 1504, 1574, 1848
AlwI GGATC 1 cut(s) 339
AlwNI CAGNNNCTG 1 cut(s) 1973
Ama87I CYCGRG 2 cut(s) 189, 230
AoxI GGCC 4 cut(s) 501, 697, 1656, 2064
ApeKI GCWGC 2 cut(s) 1343, 1768
ApoI RAATTY 3 cut(s) 442, 1387, 1875
ArsI GACNNNNNNTTYG 4 cut(s) 8, 40, 1676, 1708
AseI ATTAAT 1 cut(s) 1151
AspLEI GCGC 2 cut(s) 36, 1013
AspS9I GGNCC 4 cut(s) 391, 742, 1657, 2064
AsuC2I CCSGG 2 cut(s) 336, 746
AsuHPI GGTGA 3 cut(s) 262, 827, 1060
AsuII TTCGAA 2 cut(s) 420, 1695
AvaI CYCGRG 2 cut(s) 189, 230
AvaII GGWCC 2 cut(s) 391, 742
BanII GRGCYC 2 cut(s) 336, 1885
BbsI GAAGAC 3 cut(s) 127, 292, 2070
BbvI GCAGC 2 cut(s) 1355, 1780
BccI CCATC 6 cut(s) 674, 992, 1045, 1357, 1619, 1777
BclI TGATCA 6 cut(s) 252, 465, 570, 1095, 1357, 1602
BcnI CCSGG 2 cut(s) 336, 746
BcoDI GTCTC 3 cut(s) 1504, 1574, 1848
BfaI CTAG 2 cut(s) 1334, 1595
BfmI CTRYAG 1 cut(s) 1743
BisI GCNGC 4 cut(s) 154, 1009, 1344, 1769
BlsI GCNGC 4 cut(s) 155, 1010, 1345, 1770
Bme1390I CCNGG 2 cut(s) 336, 746
Bme18I GGWCC 2 cut(s) 391, 742
BmeT110I CYCGRG 2 cut(s) 189, 230
BmgBI CACGTC 2 cut(s) 184, 238
BmgT120I GGNCC 4 cut(s) 391, 742, 1657, 2064
BmiI GGNNCC 4 cut(s) 392, 543, 744, 2065
BmrFI CCNGG 2 cut(s) 336, 746
BmsI GCATC 5 cut(s) 595, 1435, 1877, 1960, 2008
BpiI GAAGAC 3 cut(s) 127, 292, 2070
BpmI CTGGAG 1 cut(s) 1598
Bpu10I CCTNAGC 1 cut(s) 714
Bpu14I TTCGAA 2 cut(s) 420, 1695
BpuEI CTTGAG 1 cut(s) 26
BpuMI CCSGG 2 cut(s) 336, 746
BsaHI GRCGYC 1 cut(s) 132
BsaJI CCNNGG 1 cut(s) 231
BsaXI ACNNNNNCTCC 6 cut(s) 56, 69, 86, 99, 799, 829
Bsc4I CCNNNNNNNGG 4 cut(s) 387, 638, 706, 1834
Bse1I ACTGG 1 cut(s) 385
Bse3DI GCAATG 2 cut(s) 996, 1140
BseDI CCNNGG 1 cut(s) 231
BseGI GGATG 9 cut(s) 144, 159, 204, 528, 610, 846, 866, 925, 976
BseLI CCNNNNNNNGG 4 cut(s) 387, 638, 706, 1834
BseMI GCAATG 2 cut(s) 996, 1140
BseMII CTCAG 1 cut(s) 624
BseNI ACTGG 1 cut(s) 385
BseRI GAGGAG 3 cut(s) 38, 77, 654
BseXI GCAGC 2 cut(s) 1355, 1780
BseYI CCCAGC 1 cut(s) 598
Bsh1236I CGCG 2 cut(s) 36, 1011
BshFI GGCC 4 cut(s) 503, 699, 1658, 2066
BsiHKCI CYCGRG 2 cut(s) 189, 230
BsiSI CCGG 3 cut(s) 336, 746, 968
BslFI GGGAC 3 cut(s) 10, 404, 421
BslI CCNNNNNNNGG 4 cut(s) 387, 638, 706, 1834
BsmAI GTCTC 3 cut(s) 1504, 1574, 1848
BsmFI GGGAC 3 cut(s) 10, 404, 421
BsmI GAATGC 1 cut(s) 339
BsnI GGCC 4 cut(s) 503, 699, 1658, 2066
BsoBI CYCGRG 2 cut(s) 189, 230
Bsp119I TTCGAA 2 cut(s) 420, 1695
Bsp1286I GDGCHC 2 cut(s) 336, 1885
Bsp1407I TGTACA 1 cut(s) 1713
Bsp143I GATC 8 cut(s) 252, 344, 465, 570, 1095, 1276, 1357, 1602
BspANI GGCC 4 cut(s) 503, 699, 1658, 2066
BspCNI CTCAG 1 cut(s) 625
BspFNI CGCG 2 cut(s) 36, 1011
BspLI GGNNCC 4 cut(s) 392, 543, 744, 2065
BspMAI CTGCAG 1 cut(s) 1747
BspPI GGATC 1 cut(s) 339
BspT104I TTCGAA 2 cut(s) 420, 1695
BsrDI GCAATG 2 cut(s) 996, 1140
BsrGI TGTACA 1 cut(s) 1713
BsrI ACTGG 1 cut(s) 385
BssECI CCNNGG 1 cut(s) 231
BssMI GATC 8 cut(s) 252, 344, 465, 570, 1095, 1276, 1357, 1602
BssNI GRCGYC 1 cut(s) 132
Bst4CI ACNGT 5 cut(s) 250, 427, 1029, 1212, 1799
Bst6I CTCTTC 2 cut(s) 363, 839
BstACI GRCGYC 1 cut(s) 132
BstAUI TGTACA 1 cut(s) 1713
BstBI TTCGAA 2 cut(s) 420, 1695
BstC8I GCNNGC 3 cut(s) 332, 1747, 1885
BstDEI CTNAG 3 cut(s) 633, 714, 1984
BstENI CCTNNNNNAGG 2 cut(s) 636, 1832
BstF5I GGATG 9 cut(s) 144, 159, 204, 528, 610, 846, 866, 925, 976
BstFNI CGCG 2 cut(s) 36, 1011
BstHHI GCGC 2 cut(s) 36, 1013
BstKTI GATC 8 cut(s) 255, 347, 468, 573, 1098, 1279, 1360, 1605
BstMAI GTCTC 3 cut(s) 1504, 1574, 1848
BstMBI GATC 8 cut(s) 252, 344, 465, 570, 1095, 1276, 1357, 1602
BstMWI GCNNNNNNNGC 8 cut(s) 185, 336, 1130, 1172, 1265, 1746, 1751, 1760
BstSCI CCNGG 2 cut(s) 334, 744
BstSFI CTRYAG 1 cut(s) 1743
BstUI CGCG 2 cut(s) 36, 1011
BstV1I GCAGC 2 cut(s) 1355, 1780
BstV2I GAAGAC 3 cut(s) 127, 292, 2070
BsuRI GGCC 4 cut(s) 503, 699, 1658, 2066
BtrI CACGTC 2 cut(s) 184, 238
BtsCI GGATG 9 cut(s) 144, 159, 204, 528, 610, 846, 866, 925, 976
BtsI GCAGTG 2 cut(s) 223, 2055
BtsIMutI CAGTG 6 cut(s) 223, 242, 392, 1034, 1301, 2055
Cac8I GCNNGC 3 cut(s) 332, 1747, 1885
CaiI CAGNNNCTG 1 cut(s) 1973
CfoI GCGC 2 cut(s) 36, 1013
Cfr13I GGNCC 4 cut(s) 391, 742, 1657, 2064
CseI GACGC 2 cut(s) 25, 1559
Csp6I GTAC 3 cut(s) 454, 1714, 1981
CviAII CATG 9 cut(s) 658, 893, 1157, 1205, 1394, 1654, 1730, 1953, 2003
CviQI GTAC 3 cut(s) 454, 1714, 1981
DdeI CTNAG 3 cut(s) 633, 714, 1984
DpnI GATC 8 cut(s) 254, 346, 467, 572, 1097, 1278, 1359, 1604
DpnII GATC 8 cut(s) 252, 344, 465, 570, 1095, 1276, 1357, 1602
DraI TTTAAA 2 cut(s) 1251, 1893
Eam1104I CTCTTC 2 cut(s) 363, 839
EarI CTCTTC 2 cut(s) 363, 839
EciI GGCGGA 4 cut(s) 85, 140, 941, 1274
Eco24I GRGCYC 2 cut(s) 336, 1885
Eco47I GGWCC 2 cut(s) 391, 742
Eco57I CTGAAG 1 cut(s) 1776
Eco88I CYCGRG 2 cut(s) 189, 230
EcoNI CCTNNNNNAGG 2 cut(s) 636, 1832
EcoRI GAATTC 1 cut(s) 1387
EcoT22I ATGCAT 2 cut(s) 610, 1158
EcoT38I GRGCYC 2 cut(s) 336, 1885
FaeI CATG 9 cut(s) 661, 896, 1160, 1208, 1397, 1657, 1733, 1956, 2006
FaqI GGGAC 3 cut(s) 10, 404, 421
FatI CATG 9 cut(s) 657, 892, 1156, 1204, 1393, 1653, 1729, 1952, 2002
FauI CCCGC 2 cut(s) 797, 901
FauNDI CATATG 1 cut(s) 1555
FbaI TGATCA 6 cut(s) 252, 465, 570, 1095, 1357, 1602
FblI GTMKAC 1 cut(s) 6
Fnu4HI GCNGC 4 cut(s) 154, 1009, 1344, 1769
FokI GGATG 9 cut(s) 131, 146, 191, 535, 617, 853, 873, 932, 983
FriOI GRGCYC 2 cut(s) 336, 1885
Fsp4HI GCNGC 4 cut(s) 154, 1009, 1344, 1769
FspBI CTAG 2 cut(s) 1334, 1595
GlaI GCGC 2 cut(s) 35, 1012
GluI GCNGC 4 cut(s) 154, 1009, 1344, 1769
GsaI CCCAGC 1 cut(s) 602
GsuI CTGGAG 1 cut(s) 1598
HaeIII GGCC 4 cut(s) 503, 699, 1658, 2066
HapII CCGG 3 cut(s) 336, 746, 968
HgaI GACGC 2 cut(s) 25, 1559
HhaI GCGC 2 cut(s) 36, 1013
Hin1I GRCGYC 1 cut(s) 132
Hin1II CATG 9 cut(s) 661, 896, 1160, 1208, 1397, 1657, 1733, 1956, 2006
Hin6I GCGC 2 cut(s) 34, 1011
HinP1I GCGC 2 cut(s) 34, 1011
HincII GTYRAC 3 cut(s) 7, 1637, 2056
HindII GTYRAC 3 cut(s) 7, 1637, 2056
HindIII AAGCTT 2 cut(s) 1019, 1992
HpaII CCGG 3 cut(s) 336, 746, 968
HphI GGTGA 3 cut(s) 262, 827, 1060
Hpy166II GTNNAC 5 cut(s) 7, 873, 1473, 1637, 2056
Hpy188III TCNNGA 5 cut(s) 13, 469, 650, 1280, 1860
Hpy8I GTNNAC 5 cut(s) 7, 873, 1473, 1637, 2056
Hpy99I CGWCG 4 cut(s) 134, 179, 188, 200
HpyAV CCTTC 9 cut(s) 379, 493, 526, 949, 1051, 1114, 1156, 1319, 1751
HpyCH4III ACNGT 5 cut(s) 250, 427, 1029, 1212, 1799
HpyCH4IV ACGT 6 cut(s) 132, 183, 237, 452, 1187, 2027
HpyF10VI GCNNNNNNNGC 8 cut(s) 185, 336, 1130, 1172, 1265, 1746, 1751, 1760
HpyF3I CTNAG 3 cut(s) 633, 714, 1984
HpySE526I ACGT 6 cut(s) 132, 183, 237, 452, 1187, 2027
Hsp92I GRCGYC 1 cut(s) 132
Hsp92II CATG 9 cut(s) 661, 896, 1160, 1208, 1397, 1657, 1733, 1956, 2006
HspAI GCGC 2 cut(s) 34, 1011
Ksp22I TGATCA 6 cut(s) 252, 465, 570, 1095, 1357, 1602
Kzo9I GATC 8 cut(s) 252, 344, 465, 570, 1095, 1276, 1357, 1602
LmnI GCTCC 2 cut(s) 51, 541
Lsp1109I GCAGC 2 cut(s) 1355, 1780
LweI GCATC 5 cut(s) 595, 1435, 1877, 1960, 2008
MaeI CTAG 2 cut(s) 1334, 1595
MaeII ACGT 6 cut(s) 132, 183, 237, 452, 1187, 2027
MaeIII GTNAC 5 cut(s) 557, 1223, 1547, 1705, 1813
MalI GATC 8 cut(s) 254, 346, 467, 572, 1097, 1278, 1359, 1604
MboI GATC 8 cut(s) 252, 344, 465, 570, 1095, 1276, 1357, 1602
MhlI GDGCHC 2 cut(s) 336, 1885
MlyI GAGTC 5 cut(s) 86, 386, 651, 1203, 1850
MmeI TCCRAC 2 cut(s) 405, 2039
Mph1103I ATGCAT 2 cut(s) 610, 1158
MseI TTAA 7 cut(s) 1151, 1199, 1250, 1368, 1619, 1892, 2089
MslI CAYNNNNRTG 1 cut(s) 1829
MspI CCGG 3 cut(s) 336, 746, 968
MspR9I CCNGG 2 cut(s) 336, 746
Mva1269I GAATGC 1 cut(s) 339
MvnI CGCG 2 cut(s) 36, 1011
MwoI GCNNNNNNNGC 8 cut(s) 185, 336, 1130, 1172, 1265, 1746, 1751, 1760
NciI CCSGG 2 cut(s) 336, 746
NdeI CATATG 1 cut(s) 1555
NdeII GATC 8 cut(s) 252, 344, 465, 570, 1095, 1276, 1357, 1602
NlaIII CATG 9 cut(s) 661, 896, 1160, 1208, 1397, 1657, 1733, 1956, 2006
NlaIV GGNNCC 4 cut(s) 392, 543, 744, 2065
NmeAIII GCCGAG 1 cut(s) 424
NmuCI GTSAC 2 cut(s) 1547, 1813
NsiI ATGCAT 2 cut(s) 610, 1158
NspV TTCGAA 2 cut(s) 420, 1695
PcsI WCGNNNNNNNCGW 3 cut(s) 87, 180, 192
PctI GAATGC 1 cut(s) 339
PfeI GAWTC 5 cut(s) 889, 1178, 1672, 1692, 1807
PflMI CCANNNNNTGG 2 cut(s) 387, 706
PkrI GCNGC 4 cut(s) 155, 1010, 1345, 1770
PleI GAGTC 5 cut(s) 86, 385, 650, 1202, 1850
PpsI GAGTC 5 cut(s) 86, 385, 650, 1202, 1850
PshBI ATTAAT 1 cut(s) 1151
PsiI TTATAA 4 cut(s) 666, 774, 939, 1086
PspFI CCCAGC 1 cut(s) 598
PspN4I GGNNCC 4 cut(s) 392, 543, 744, 2065
PspPI GGNCC 4 cut(s) 391, 742, 1657, 2064
PstI CTGCAG 1 cut(s) 1747
PstNI CAGNNNCTG 1 cut(s) 1973
RsaI GTAC 3 cut(s) 455, 1715, 1982
RsaNI GTAC 3 cut(s) 454, 1714, 1981
RseI CAYNNNNRTG 1 cut(s) 1829
SalI GTCGAC 1 cut(s) 5
SaqAI TTAA 7 cut(s) 1151, 1199, 1250, 1368, 1619, 1892, 2089
SatI GCNGC 4 cut(s) 154, 1009, 1344, 1769
Sau3AI GATC 8 cut(s) 252, 344, 465, 570, 1095, 1276, 1357, 1602
Sau96I GGNCC 4 cut(s) 391, 742, 1657, 2064
SchI GAGTC 5 cut(s) 86, 386, 651, 1203, 1850
ScrFI CCNGG 2 cut(s) 336, 746
SduI GDGCHC 2 cut(s) 336, 1885
SfaNI GCATC 5 cut(s) 595, 1435, 1877, 1960, 2008
SfcI CTRYAG 1 cut(s) 1743
SfuI TTCGAA 2 cut(s) 420, 1695
SinI GGWCC 2 cut(s) 391, 742
SmiMI CAYNNNNRTG 1 cut(s) 1829
SmlI CTYRAG 1 cut(s) 41
SmoI CTYRAG 1 cut(s) 41
SspI AATATT 2 cut(s) 670, 1930
SspMI CTAG 2 cut(s) 1334, 1595
StyD4I CCNGG 2 cut(s) 334, 744
TaaI ACNGT 5 cut(s) 250, 427, 1029, 1212, 1799
TaiI ACGT 6 cut(s) 135, 186, 240, 455, 1190, 2030
TaqI TCGA 8 cut(s) 6, 90, 198, 343, 420, 621, 996, 1695
TaqII GACCGA 1 cut(s) 408
TatI WGTACW 1 cut(s) 1713
TauI GCSGC 2 cut(s) 156, 1011
TfiI GAWTC 5 cut(s) 889, 1178, 1672, 1692, 1807
Tru1I TTAA 7 cut(s) 1151, 1199, 1250, 1368, 1619, 1892, 2089
Tru9I TTAA 7 cut(s) 1151, 1199, 1250, 1368, 1619, 1892, 2089
TscAI CASTG 6 cut(s) 230, 249, 392, 1034, 1308, 2055
TseFI GTSAC 2 cut(s) 1547, 1813
TseI GCWGC 2 cut(s) 1343, 1768
Tsp45I GTSAC 2 cut(s) 1547, 1813
TspGWI ACGGA 1 cut(s) 576
TspRI CASTG 6 cut(s) 230, 249, 392, 1034, 1308, 2055
Van91I CCANNNNNTGG 2 cut(s) 387, 706
VpaK11BI GGWCC 2 cut(s) 391, 742
VspI ATTAAT 1 cut(s) 1151
XagI CCTNNNNNAGG 2 cut(s) 636, 1832
XapI RAATTY 3 cut(s) 442, 1387, 1875
XcmI CCANNNNNNNNNTGG 1 cut(s) 511
XmiI GTMKAC 1 cut(s) 6
XspI CTAG 2 cut(s) 1334, 1595
ZraI GACGTC 1 cut(s) 133
Zsp2I ATGCAT 2 cut(s) 610, 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.