Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0006456

Physical Location & Seq

Genomic Coordinates Forward (+)

2149690 .. 2151960

Gene Structure 2271 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026319

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2271 bp

ATGGAGTGCAATAAAAGTGAGGCAGTCAGGGCTAAGGAACTTGCCGAGAGGAAGCTCCTAGAAAGAAATTATGCTAGTGCAAAGAAGATTGCTTTGAAGGCTCAAAAGTTGTATCCTGAGATTGAGGGTCTCTCTCAACTGTTGACAATAATAGATATTTATATCTGTGGAGAAAACAAAACTATTGGAGATGCGGATTGGTATGGAATACTTGGTCTGATTCCTTATGCCAAGTATGCACTCATTAGGAAACAGTATATAAAGTTGGCTCTCAGGCTTCATCCTGATAAAAACAAGTCTCCTGGTGCAGAAGGCGCATTTAAGTTGGTTTCTGAGGCGTGGAACTTGTTATCGGATAAGGCTAAGAGAGAAGAATACGAGAGACTAACATATTACCACAATAGGAACTTGGAAGAATCTCGTCGGGGAGCTCCATCCCATTCTGGGGGTCTTTCAGAACAACCTGGTACAAATGCCTTTCAAAATGTTACAAGTAGTGTAACTTCACATGCTAAGGCGCAGCATGGTCCCATGCACTCATATGGAACACCTACTACTTTCTGGACGATTTGCAATCTATGCAGGACGTATTACCAGTATCTCAGGATGTATCTAAATCAAATTCTCATGTGCTCTACATGTCAGAAGGGGTTCAGTGCTATAGAAACAGCTGCACCTCCTGGTGTTTCCGAGTCATCTAGTAGTTCTTCCTGCCAGGAACATCACACTACAAGACGCCACGGTGCTGCTAGTGGTAGACCTTTTAATTCTGGAAGAAACAATGCCGTAGCTCGAAATTTGGGAAATAAGGGGTCTTTCGCTTCTAAATCAGTGAATAAGGCAACCTTCCAACAGAGCTCTTTCTCCAAAATGACTAGTCGCGGTAGCACTGTTGCATCAGGTTGTGCTGCAGCTGTGAGTGTGGCTCAGCAGGCAAATGAGAAAGTGAAGAGACAGCGAGAGGAGAGACAGTCAATCGCTGAATGGGAGAGGAATCAAAGGTTAATGGGGAATTCTTCATTCAAAAAGAAAAGAATTGAAGATAAACATCTTAATGGTTGCGAAGGATACATGGCTAATAATATCGCCATAGGGAATGCTGGAGCTGACTTAGGAGTATCTGAATCAGGTACAGGTAATGTTGGCACAAAACGAATTTATGGTTTCTCTAGCATAGATAATATGCCTAACAGCAAGAGAGAGTTATCCTATCATGAAATGCAAAATATGCTGATGAAGAAAGCACGAACTGATATTTCCAAGGTTCTGAAGGAGCAGAGCTCAGCTACTGCATCAAAGAAACAAGAGGAGGTGAAAGTAGATAAGAAACAGAAGAATATGGTATATGCTGGGACAGAGGAAAACAGTGATAATGGCGACGATGCCAGGTCGTCAATCTTAACTAATGTTCCTGATCCTGATTTTCATGATTTTGATTTGGATCGAACTGAAAGTTCGTTTCGAGCAGAACAAGTCTGGGCCACATATGATGGTGATGGGATGCCTCGTTATTATGCTCGTATTCAGAATGTGATCTCCAGGAAGCCATTTAAACTGTGCATCAGCTGGCTTAATTCAAGAAGCAACTCTGAATTGGGTTCATTGGACTGGATAGGTTCTGGTTTCGCTAAAACCTGCGGGGATTTTAGGCCTGGCAAACGTCAAACATCCAAAACTTTAAATTCTTTCTGCAAGAAGGTTAGTTGGAAAAAAGTTGCACATGGAATGATTCGCATATTTCCTGGAAAGATGGAAGTCTGGGCTCTATATAGAAATTGGTCCCCTGATTGGAATCAGCATACCCCCAATGAAGTAATTAACAAATATGAGATGGTGGAAGTGCTGGAAGACTTTACTGAGGAACACGGTGTGTCTGTTCTTCCACTAATCAAGGTTGCTGGTTTCAGAACAGTGTTCCAAAAGTGCATGGACCCTAAAGCAGTTAGGAGGATTCCTAAAGAAGAGATGTTTCGGTTCTCGCACATTGTCCCCAGTCACTTGCTTACAGGTGCAGAAGCTCATAATGCTCCAACGGGTTGCTTTGAATTGGATCCAGCAGCTATCCCTTTGCACCTCCTCGAGGGGATAACAGAAGATAATCAGGCAGCAATGGCAGAGAATGTTGGCAAAACAAAGGAAGAGGTGTTTCAAAGTGCCTCGACTAGAGAGGTAGATGCAGGAATGGAAGAAAGGGAGATTTCAGAAAGCCGAGGACAACCAATGGGGGCAGGCAAAGGCAATAGTGCATACCTAGTTGGCCAAGGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

DUF3444 DnaJ

Protein Analysis

757

Amino Acids

84.33

Weight (kDa)

9.06

Isoelectric Point (pI)

44.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	66 - 127	7.2e-19	DnaJ domain
Zn_ribbon_20	PF23551	187 - 221	8.5e-09	Zinc beta-ribbon domain
DUF3444	PF11926	468 - 672	1.1e-71	Domain of unknown function (DUF3444)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25560 AT5G53150 AT5G53150 AT5G53150 AT5G53150 AT5G53150 AT5G53150
fragaria_vesca	FvH4_7g31170
malus_domestica	MD01G1216400.v1.1 MD07G1286200.v1.1
prunus_persica	Prupe.2G308400_v2.0.a1 Prupe.2G308400_v2.0.a1 Prupe.2G308400_v2.0.a1
pyrus_communis	pycom01g22710 pycom07g25950
rosa_chinensis	RchiOBHm_Chr1g0380211
rosa_laevigata	RLG00000026319
rosa_multiflora	Rmu_sc0001232.1_g000026
rosa_roxburghii	Rroxscaffold_4G00279560
rosa_rugosa	Rorug01G0419000
rosa_samantha	Rh1AG443900 Rh1BG398900 Rh1CG412300 Rh1DG429500
rosa_wichuraiana	Rw1G038550 Rw1G038620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	2078
Acc36I	ACCTGC	1 cut(s)	1643
AccI	GTMKAC	1 cut(s)	757
AccII	CGCG	1 cut(s)	882
AciI	CCGC	3 cut(s)	194, 882, 1638
AclWI	GGATC	4 cut(s)	1409, 1449, 2045, 2058
AcoI	YGGCCR	1 cut(s)	2257
AcsI	RAATTY	5 cut(s)	621, 796, 1012, 1155, 1681
AcuI	CTGAAG	1 cut(s)	1289
AcyI	GRCGYC	1 cut(s)	736
AdeI	CACNNNGTG	1 cut(s)	1870
AfaI	GTAC	2 cut(s)	469, 1132
AfiI	CCNNNNNNNGG	4 cut(s)	444, 445, 1788, 2080
AflIII	ACRYGT	1 cut(s)	638
AgsI	TTSAA	7 cut(s)	97, 482, 1024, 1040, 1578, 2045, 2150
AhlI	ACTAGT	1 cut(s)	875
AjnI	CCWGG	8 cut(s)	301, 463, 679, 714, 1385, 1538, 1651, 1741
Alw21I	GWGCWC	4 cut(s)	433, 635, 860, 1283
Alw26I	GTCTC	5 cut(s)	134, 303, 376, 946, 961
AlwI	GGATC	4 cut(s)	1409, 1449, 2045, 2058
AlwNI	CAGNNNCTG	1 cut(s)	1289
Ama87I	CYCGRG	1 cut(s)	2078
AoxI	GGCC	3 cut(s)	1479, 1649, 2257
ApeKI	GCWGC	7 cut(s)	520, 671, 746, 908, 911, 2057, 2105
ApoI	RAATTY	5 cut(s)	621, 796, 1012, 1155, 1681
Asp700I	GAANNNNTTC	1 cut(s)	650
AspLEI	GCGC	2 cut(s)	317, 520
AspS9I	GGNCC	4 cut(s)	527, 1479, 1779, 1930
AsuHPI	GGTGA	2 cut(s)	1324, 1505
AvaI	CYCGRG	1 cut(s)	2078
AvaII	GGWCC	3 cut(s)	527, 1779, 1930
BalI	TGGCCA	1 cut(s)	2259
BamHI	GGATCC	1 cut(s)	2050
BanII	GRGCYC	4 cut(s)	433, 860, 1283, 1765
BarI	GAAGNNNNNNTAC	2 cut(s)	487, 519
BbsI	GAAGAC	1 cut(s)	1854
Bbv12I	GWGCWC	4 cut(s)	433, 635, 860, 1283
BbvI	GCAGC	7 cut(s)	532, 658, 733, 895, 923, 2069, 2117
BccI	CCATC	5 cut(s)	442, 1484, 1490, 1744, 1825
BceAI	ACGGC	1 cut(s)	770
BciT130I	CCWGG	8 cut(s)	303, 465, 681, 716, 1387, 1540, 1653, 1743
BciVI	GTATCC	2 cut(s)	123, 1061
BcoDI	GTCTC	5 cut(s)	134, 303, 376, 946, 961
BcuI	ACTAGT	1 cut(s)	875
BfaI	CTAG	8 cut(s)	59, 75, 699, 750, 876, 1170, 2163, 2252
BfmI	CTRYAG	2 cut(s)	660, 909
BfuAI	ACCTGC	1 cut(s)	1643
BfuI	GTATCC	2 cut(s)	123, 1061
BisI	GCNGC	7 cut(s)	521, 672, 747, 909, 912, 2058, 2106
BlpI	GCTNAGC	2 cut(s)	927, 1282
BlsI	GCNGC	7 cut(s)	522, 673, 748, 910, 913, 2059, 2107
Bme1390I	CCNGG	8 cut(s)	303, 465, 681, 716, 1387, 1540, 1653, 1743
Bme18I	GGWCC	3 cut(s)	527, 1779, 1930
BmeT110I	CYCGRG	1 cut(s)	2078
BmgT120I	GGNCC	4 cut(s)	527, 1479, 1779, 1930
BmiI	GGNNCC	4 cut(s)	529, 1781, 1932, 2052
BmrFI	CCNGG	8 cut(s)	303, 465, 681, 716, 1387, 1540, 1653, 1743
BmrI	ACTGGG	1 cut(s)	1986
BmsI	GCATC	7 cut(s)	181, 905, 1301, 1372, 1491, 1569, 2164
BmuI	ACTGGG	1 cut(s)	1986
BpiI	GAAGAC	1 cut(s)	1854
BplI	GAGNNNNNCTC	6 cut(s)	116, 148, 910, 942, 1265, 1297
BpmI	CTGGAG	2 cut(s)	1122, 1522
Bpu10I	CCTNAGC	2 cut(s)	33, 513
Bpu1102I	GCTNAGC	2 cut(s)	927, 1282
BsaBI	GATNNNNATC	3 cut(s)	1047, 1440, 1791
BsaHI	GRCGYC	1 cut(s)	736
BsaI	GGTCTC	1 cut(s)	134
BsaJI	CCNNGG	4 cut(s)	739, 1260, 2209, 2260
BsaXI	ACNNNNNCTCC	2 cut(s)	956, 986
Bsc4I	CCNNNNNNNGG	4 cut(s)	444, 445, 1788, 2080
Bse1I	ACTGG	3 cut(s)	595, 1613, 1992
Bse3DI	GCAATG	1 cut(s)	2115
Bse8I	GATNNNNATC	3 cut(s)	1047, 1440, 1791
BseBI	CCWGG	8 cut(s)	303, 465, 681, 716, 1387, 1540, 1653, 1743
BseDI	CCNNGG	4 cut(s)	739, 1260, 2209, 2260
BseGI	GGATG	5 cut(s)	280, 434, 612, 1506, 1667
BseJI	GATNNNNATC	3 cut(s)	1047, 1440, 1791
BseLI	CCNNNNNNNGG	4 cut(s)	444, 445, 1788, 2080
BseMI	GCAATG	1 cut(s)	2115
BseMII	CTCAG	7 cut(s)	108, 286, 324, 616, 941, 1296, 1848
BseNI	ACTGG	3 cut(s)	595, 1613, 1992
BseRI	GAGGAG	3 cut(s)	977, 1322, 2066
BseXI	GCAGC	7 cut(s)	532, 658, 733, 895, 923, 2069, 2117
BseYI	CCCAGC	1 cut(s)	1349
BsgI	GTGCAG	3 cut(s)	327, 657, 2031
Bsh1236I	CGCG	1 cut(s)	882
BshFI	GGCC	3 cut(s)	1481, 1651, 2259
BsiHKAI	GWGCWC	4 cut(s)	433, 635, 860, 1283
BsiHKCI	CYCGRG	1 cut(s)	2078
BslFI	GGGAC	4 cut(s)	513, 1366, 1765, 1973
BslI	CCNNNNNNNGG	4 cut(s)	444, 445, 1788, 2080
BsmAI	GTCTC	5 cut(s)	134, 303, 376, 946, 961
BsmFI	GGGAC	4 cut(s)	513, 1366, 1765, 1973
BsmI	GAATGC	1 cut(s)	1102
BsnI	GGCC	3 cut(s)	1481, 1651, 2259
Bso31I	GGTCTC	1 cut(s)	134
BsoBI	CYCGRG	1 cut(s)	2078
Bsp1286I	GDGCHC	5 cut(s)	433, 635, 860, 1283, 1765
Bsp143I	GATC	4 cut(s)	1414, 1441, 1533, 2050
Bsp1720I	GCTNAGC	2 cut(s)	927, 1282
BspACI	CCGC	3 cut(s)	194, 882, 1638
BspANI	GGCC	3 cut(s)	1481, 1651, 2259
BspCNI	CTCAG	7 cut(s)	109, 285, 325, 615, 940, 1295, 1849
BspFNI	CGCG	1 cut(s)	882
BspHI	TCATGA	2 cut(s)	1213, 1426
BspLI	GGNNCC	4 cut(s)	529, 1781, 1932, 2052
BspMAI	CTGCAG	1 cut(s)	913
BspMI	ACCTGC	1 cut(s)	1643
BspPI	GGATC	4 cut(s)	1409, 1449, 2045, 2058
BspTNI	GGTCTC	1 cut(s)	134
BsrDI	GCAATG	1 cut(s)	2115
BsrI	ACTGG	3 cut(s)	595, 1613, 1992
BssECI	CCNNGG	4 cut(s)	739, 1260, 2209, 2260
BssMI	GATC	4 cut(s)	1414, 1441, 1533, 2050
BssNI	GRCGYC	1 cut(s)	736
BssT1I	CCWWGG	2 cut(s)	1260, 2260
Bst2UI	CCWGG	8 cut(s)	303, 465, 681, 716, 1387, 1540, 1653, 1743
Bst4CI	ACNGT	9 cut(s)	141, 255, 743, 892, 972, 1367, 1557, 1868, 1912
Bst6I	CTCTTC	3 cut(s)	944, 1956, 2133
BstACI	GRCGYC	1 cut(s)	736
BstAPI	GCANNNNNTGC	2 cut(s)	579, 1228
BstC8I	GCNNGC	3 cut(s)	933, 1568, 2230
BstDSI	CCRYGG	1 cut(s)	739
BstENI	CCTNNNNNAGG	1 cut(s)	2078
BstF5I	GGATG	5 cut(s)	280, 434, 612, 1506, 1667
BstFNI	CGCG	1 cut(s)	882
BstHHI	GCGC	2 cut(s)	317, 520
BstKTI	GATC	4 cut(s)	1417, 1444, 1536, 2053
BstMAI	GTCTC	5 cut(s)	134, 303, 376, 946, 961
BstMBI	GATC	4 cut(s)	1414, 1441, 1533, 2050
BstMWI	GCNNNNNNNGC	9 cut(s)	29, 98, 236, 314, 579, 932, 1228, 2024, 2111
BstNI	CCWGG	8 cut(s)	303, 465, 681, 716, 1387, 1540, 1653, 1743
BstNSI	RCATGY	2 cut(s)	512, 642
BstSCI	CCNGG	8 cut(s)	301, 463, 679, 714, 1385, 1538, 1651, 1741
BstSFI	CTRYAG	2 cut(s)	660, 909
BstUI	CGCG	1 cut(s)	882
BstV1I	GCAGC	7 cut(s)	532, 658, 733, 895, 923, 2069, 2117
BstV2I	GAAGAC	1 cut(s)	1854
BstX2I	RGATCY	1 cut(s)	2050
BstYI	RGATCY	1 cut(s)	2050
BsuI	GTATCC	2 cut(s)	123, 1061
BsuRI	GGCC	3 cut(s)	1481, 1651, 2259
BtgI	CCRYGG	1 cut(s)	739
BtsCI	GGATG	5 cut(s)	280, 434, 612, 1506, 1667
BtsIMutI	CAGTG	5 cut(s)	661, 837, 888, 1372, 1917
BveI	ACCTGC	1 cut(s)	1643
Cac8I	GCNNGC	3 cut(s)	933, 1568, 2230
CaiI	CAGNNNCTG	1 cut(s)	1289
CciI	TCATGA	2 cut(s)	1213, 1426
CfoI	GCGC	2 cut(s)	317, 520
Cfr13I	GGNCC	4 cut(s)	527, 1479, 1779, 1930
CseI	GACGC	1 cut(s)	744
CsiI	ACCWGGT	1 cut(s)	463
Csp6I	GTAC	2 cut(s)	468, 1131
CviQI	GTAC	2 cut(s)	468, 1131
DpnI	GATC	4 cut(s)	1416, 1443, 1535, 2052
DpnII	GATC	4 cut(s)	1414, 1441, 1533, 2050
DraI	TTTAAA	2 cut(s)	1552, 1680
DraIII	CACNNNGTG	1 cut(s)	1870
EaeI	YGGCCR	1 cut(s)	2257
Eam1104I	CTCTTC	3 cut(s)	944, 1956, 2133
EarI	CTCTTC	3 cut(s)	944, 1956, 2133
Ecl136II	GAGCTC	3 cut(s)	431, 858, 1281
Eco130I	CCWWGG	2 cut(s)	1260, 2260
Eco147I	AGGCCT	1 cut(s)	1651
Eco24I	GRGCYC	4 cut(s)	433, 860, 1283, 1765
Eco31I	GGTCTC	1 cut(s)	134
Eco47I	GGWCC	3 cut(s)	527, 1779, 1930
Eco53kI	GAGCTC	3 cut(s)	431, 858, 1281
Eco57I	CTGAAG	1 cut(s)	1289
Eco88I	CYCGRG	1 cut(s)	2078
EcoICRI	GAGCTC	3 cut(s)	431, 858, 1281
EcoNI	CCTNNNNNAGG	1 cut(s)	2078
EcoRI	GAATTC	1 cut(s)	1012
EcoRII	CCWGG	8 cut(s)	301, 463, 679, 714, 1385, 1538, 1651, 1741
EcoT14I	CCWWGG	2 cut(s)	1260, 2260
EcoT38I	GRGCYC	4 cut(s)	433, 860, 1283, 1765
ErhI	CCWWGG	2 cut(s)	1260, 2260
FalI	AAGNNNNNCTT	2 cut(s)	830, 862
FaqI	GGGAC	4 cut(s)	513, 1366, 1765, 1973
FauI	CCCGC	1 cut(s)	1631
FauNDI	CATATG	2 cut(s)	541, 1486
FblI	GTMKAC	1 cut(s)	757
Fnu4HI	GCNGC	7 cut(s)	521, 672, 747, 909, 912, 2058, 2106
FokI	GGATG	5 cut(s)	267, 421, 619, 1513, 1654
FriOI	GRGCYC	4 cut(s)	433, 860, 1283, 1765
Fsp4HI	GCNGC	7 cut(s)	521, 672, 747, 909, 912, 2058, 2106
FspBI	CTAG	8 cut(s)	59, 75, 699, 750, 876, 1170, 2163, 2252
GlaI	GCGC	2 cut(s)	316, 519
GluI	GCNGC	7 cut(s)	521, 672, 747, 909, 912, 2058, 2106
GsaI	CCCAGC	1 cut(s)	1353
GsuI	CTGGAG	2 cut(s)	1122, 1522
HaeIII	GGCC	3 cut(s)	1481, 1651, 2259
HgaI	GACGC	1 cut(s)	744
HhaI	GCGC	2 cut(s)	317, 520
Hin1I	GRCGYC	1 cut(s)	736
Hin6I	GCGC	2 cut(s)	315, 518
HinP1I	GCGC	2 cut(s)	315, 518
HincII	GTYRAC	1 cut(s)	144
HindII	GTYRAC	1 cut(s)	144
HinfI	GANTC	8 cut(s)	220, 416, 692, 994, 1124, 1729, 1792, 1951
HphI	GGTGA	2 cut(s)	1324, 1505
Hpy166II	GTNNAC	2 cut(s)	144, 758
Hpy8I	GTNNAC	2 cut(s)	144, 758
Hpy99I	CGWCG	2 cut(s)	426, 1382
HpyAV	CCTTC	7 cut(s)	91, 305, 640, 856, 1058, 1264, 1690
HpyCH4III	ACNGT	9 cut(s)	141, 255, 743, 892, 972, 1367, 1557, 1868, 1912
HpyCH4IV	ACGT	2 cut(s)	587, 1660
HpyF10VI	GCNNNNNNNGC	9 cut(s)	29, 98, 236, 314, 579, 932, 1228, 2024, 2111
HpySE526I	ACGT	2 cut(s)	587, 1660
Hsp92I	GRCGYC	1 cut(s)	736
HspAI	GCGC	2 cut(s)	315, 518
Kzo9I	GATC	4 cut(s)	1414, 1441, 1533, 2050
LmnI	GCTCC	6 cut(s)	60, 428, 436, 1103, 1273, 2032
Lsp1109I	GCAGC	7 cut(s)	532, 658, 733, 895, 923, 2069, 2117
LweI	GCATC	7 cut(s)	181, 905, 1301, 1372, 1491, 1569, 2164
MabI	ACCWGGT	1 cut(s)	463
MaeI	CTAG	8 cut(s)	59, 75, 699, 750, 876, 1170, 2163, 2252
MaeII	ACGT	2 cut(s)	587, 1660
MaeIII	GTNAC	3 cut(s)	487, 499, 1994
MalI	GATC	4 cut(s)	1416, 1443, 1535, 2052
MboI	GATC	4 cut(s)	1414, 1441, 1533, 2050
MflI	RGATCY	1 cut(s)	2050
MhlI	GDGCHC	5 cut(s)	433, 635, 860, 1283, 1765
MlsI	TGGCCA	1 cut(s)	2259
MluNI	TGGCCA	1 cut(s)	2259
MlyI	GAGTC	1 cut(s)	701
MmeI	TCCRAC	3 cut(s)	874, 1685, 2054
Mox20I	TGGCCA	1 cut(s)	2259
MroXI	GAANNNNTTC	1 cut(s)	650
MscI	TGGCCA	1 cut(s)	2259
MseI	TTAA	9 cut(s)	321, 765, 1004, 1053, 1400, 1551, 1572, 1679, 1818
MslI	CAYNNNNRTG	2 cut(s)	540, 1053
Msp20I	TGGCCA	1 cut(s)	2259
MspA1I	CMGCKG	3 cut(s)	671, 914, 1566
MspR9I	CCNGG	8 cut(s)	303, 465, 681, 716, 1387, 1540, 1653, 1743
Mva1269I	GAATGC	1 cut(s)	1102
MvaI	CCWGG	8 cut(s)	303, 465, 681, 716, 1387, 1540, 1653, 1743
MvnI	CGCG	1 cut(s)	882
MwoI	GCNNNNNNNGC	9 cut(s)	29, 98, 236, 314, 579, 932, 1228, 2024, 2111
NdeI	CATATG	2 cut(s)	541, 1486
NdeII	GATC	4 cut(s)	1414, 1441, 1533, 2050
NlaIV	GGNNCC	4 cut(s)	529, 1781, 1932, 2052
NmeAIII	GCCGAG	2 cut(s)	70, 2234
NmuCI	GTSAC	1 cut(s)	1994
NspI	RCATGY	2 cut(s)	512, 642
PaeR7I	CTCGAG	1 cut(s)	2078
PagI	TCATGA	2 cut(s)	1213, 1426
PceI	AGGCCT	1 cut(s)	1651
PciI	ACATGT	1 cut(s)	638
PctI	GAATGC	1 cut(s)	1102
PdmI	GAANNNNTTC	1 cut(s)	650
PfeI	GAWTC	7 cut(s)	220, 416, 994, 1124, 1729, 1792, 1951
PfoI	TCCNGGA	2 cut(s)	1538, 1741
PkrI	GCNGC	7 cut(s)	522, 673, 748, 910, 913, 2059, 2107
PleI	GAGTC	1 cut(s)	700
PpsI	GAGTC	1 cut(s)	700
PscI	ACATGT	1 cut(s)	638
Psp124BI	GAGCTC	3 cut(s)	433, 860, 1283
Psp6I	CCWGG	8 cut(s)	301, 463, 679, 714, 1385, 1538, 1651, 1741
PspFI	CCCAGC	1 cut(s)	1349
PspGI	CCWGG	8 cut(s)	301, 463, 679, 714, 1385, 1538, 1651, 1741
PspN4I	GGNNCC	4 cut(s)	529, 1781, 1932, 2052
PspPI	GGNCC	4 cut(s)	527, 1479, 1779, 1930
PspXI	VCTCGAGB	1 cut(s)	2078
PsrI	GAACNNNNNNTAC	2 cut(s)	538, 570
PstI	CTGCAG	1 cut(s)	913
PstNI	CAGNNNCTG	1 cut(s)	1289
PsuI	RGATCY	1 cut(s)	2050
PvuII	CAGCTG	3 cut(s)	671, 914, 1566
RsaI	GTAC	2 cut(s)	469, 1132
RsaNI	GTAC	2 cut(s)	468, 1131
RseI	CAYNNNNRTG	2 cut(s)	540, 1053
SacI	GAGCTC	3 cut(s)	433, 860, 1283
SaqAI	TTAA	9 cut(s)	321, 765, 1004, 1053, 1400, 1551, 1572, 1679, 1818
SatI	GCNGC	7 cut(s)	521, 672, 747, 909, 912, 2058, 2106
Sau3AI	GATC	4 cut(s)	1414, 1441, 1533, 2050
Sau96I	GGNCC	4 cut(s)	527, 1479, 1779, 1930
SchI	GAGTC	1 cut(s)	701
ScrFI	CCNGG	8 cut(s)	303, 465, 681, 716, 1387, 1540, 1653, 1743
SduI	GDGCHC	5 cut(s)	433, 635, 860, 1283, 1765
SexAI	ACCWGGT	1 cut(s)	463
SfaNI	GCATC	7 cut(s)	181, 905, 1301, 1372, 1491, 1569, 2164
SfcI	CTRYAG	2 cut(s)	660, 909
Sfr274I	CTCGAG	1 cut(s)	2078
SinI	GGWCC	3 cut(s)	527, 1779, 1930
SlaI	CTCGAG	1 cut(s)	2078
SmiMI	CAYNNNNRTG	2 cut(s)	540, 1053
SmlI	CTYRAG	1 cut(s)	2078
SmoI	CTYRAG	1 cut(s)	2078
SpeI	ACTAGT	1 cut(s)	875
SseBI	AGGCCT	1 cut(s)	1651
SsiI	CCGC	3 cut(s)	194, 882, 1638
SspMI	CTAG	8 cut(s)	59, 75, 699, 750, 876, 1170, 2163, 2252
SstI	GAGCTC	3 cut(s)	433, 860, 1283
StuI	AGGCCT	1 cut(s)	1651
StyD4I	CCNGG	8 cut(s)	301, 463, 679, 714, 1385, 1538, 1651, 1741
StyI	CCWWGG	2 cut(s)	1260, 2260
TaaI	ACNGT	9 cut(s)	141, 255, 743, 892, 972, 1367, 1557, 1868, 1912
TaiI	ACGT	2 cut(s)	590, 1663
TaqI	TCGA	5 cut(s)	793, 1444, 1462, 2079, 2159
TfiI	GAWTC	7 cut(s)	220, 416, 994, 1124, 1729, 1792, 1951
Tru1I	TTAA	9 cut(s)	321, 765, 1004, 1053, 1400, 1551, 1572, 1679, 1818
Tru9I	TTAA	9 cut(s)	321, 765, 1004, 1053, 1400, 1551, 1572, 1679, 1818
TscAI	CASTG	5 cut(s)	661, 837, 895, 1372, 1917
TseFI	GTSAC	1 cut(s)	1994
TseI	GCWGC	7 cut(s)	520, 671, 746, 908, 911, 2057, 2105
Tsp45I	GTSAC	1 cut(s)	1994
TspDTI	ATGAA	7 cut(s)	269, 1008, 1230, 1250, 1415, 1590, 1824
TspRI	CASTG	5 cut(s)	661, 837, 895, 1372, 1917
VpaK11BI	GGWCC	3 cut(s)	527, 1779, 1930
XagI	CCTNNNNNAGG	1 cut(s)	2078
XapI	RAATTY	5 cut(s)	621, 796, 1012, 1155, 1681
XceI	RCATGY	2 cut(s)	512, 642
XhoI	CTCGAG	1 cut(s)	2078
XmiI	GTMKAC	1 cut(s)	757
XmnI	GAANNNNTTC	1 cut(s)	650
XspI	CTAG	8 cut(s)	59, 75, 699, 750, 876, 1170, 2163, 2252

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.