Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0006456

Physical Location & Seq

Genomic Coordinates Reverse (-)

67505697 .. 67509343

Gene Structure 3647 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG412300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGCTTACTGCCTTACTGGTGCCAAAGAATAGTTGGATTCCTGAGGAATTTATGGATTGCAATAAAAGTGAGGCAGTCAGGGCTAAGGAACTTGCCGAGAGGAAGCTCCTAGAAAGAAATTATGCTAGTGCAAAGAAGATTGCTTTGAAGGCTCAAAAGTTGTATCCTGAGCTTGAGGGTCTCTCTCAACTGTTGACAATAATAGATATTTATATCTGTGGAGAAAACAAAACTATTGGAGATGCGGATTGGTATGGAATACTTGGTGTGATTCCTTATGCCAAGTATGCACTCATTAGGAAACAGTATATAAAGTTGGCTCTCAGGCTTCATCCTGATAAAAACAAGTCTCCTGGTGCAGAAGGCGCATTTAAGCTGGTTTCTGAGGCGTGGAACTTTTTATCGGATAAGGCTAAGAGAGAAGAATACGAGAGACTAACATATTACCACAATAGGAACTTGGAAGAATCTCGTCGGGGAGCTCCATCCCATTCTGGGGGTCTTTCAGAACAACCTGGTACAAATGCCTTTCAAAATGTTACAAATAGTGTAACTTCACATGCTACGGCGCAGCATGGTCCCATGCACTCATATGGAACACCTACTACTTTCTGGACGATTTGCAATCTGTGCAAGACGTATTACCAGTATCTCAGGATGTATCTAAATCAAACTCTCATGTGCTCTACATGTCAGAAGGGGTTTAGTGCTATAGAAACAGCTGCACCTCCCGGTGTTTCCGAGTCATCTAGTAGTTCTTCTTGCCAGGAACATCACACTACAAGACGCCACGGTGCTGCTAGTGGTAGACCTTTTAATTCTGGAAGAAACAATGCCGTAGCTCGAAATAAGGGGTCTTTCGCTTCTAAATCAGTGAATAAGGCAACCTTCCAACAGAGCTTTTTCTCCAAAATGACTAGTCGCGGTAGCACTGTTGCATCAGGTTGTGCTGCAGCTGTGAGTGTGGCTCAGCAGGCAAATGAGAAAGTGAAGAGACAGCGAGAGGAGAGACAGTCAATCGCTGAATGGGAGAGGAATCAAAAGTTAATGGGGAATTCTTCATTCAAAAAGAAAAGAATTGAAGATCAACATCTTAATGGTTGCGAAGGATACATGGCTAATAATATCGCCATAGGAAATGCTGGAGCTGACATAGGAGTATCTGAATCAGGTACAGGTAATGTTGGCACAAAAAGAATTTATGGTTTCTCTAGCATAGATAATATGCCTAACAGCAAGAGAGAGTTATCCTATCATGAAATGCAAAATATGCTGATGAAGAAAGCACGAACTGATATTTCCAAGGTTCTGAAGGAGCAGAACTCAGCTACTGCATCAAAGAAACAAGAGGAGGTGAAAGAAGATAAGAAACAGAAGAATGTGGTATATGCTGGGACAGAGGAAAACAGTGATAATGGCGACGATGCCAGGTCGTCAATCTTAACTAATGTTCCTGATCCTGATTTTCATAATTTTGATTTGGATCGAACTGAAAGTTCGTTTCAAGCAGAACAAGTCTGGGCCACATATGATGGTGATGGGATGCCTCGTTATTATGCTCGTATTCAGAATGTGATCTCCAGGAAGCCATTTAAATTGTGCATCAGCTGGCTTAATTCAAGAAGCAACTCTGAATTGGGTTCATTGGACTGGATAGGTTCTGGTTTCGCTAAAACCTGTGGGGATTTTAGGCCTGGCAAACGTCAAACATCCAAAACTTTAAATTCTTTCTGCAAGAAGGTTAGTTGGAAAAAAGTTGCACATGGAATGATTCGCATATTTCCTGGAAAGATGGAAGTCTGGGCTTTATATAGAAATTGGTCCCCTGATTGGAATCAGCATACCCCCAATGAAGTAATCAACAAATATGAGATGGTGGAAGTGCTGGAAGACTTTACTGAGGAACACGGTGTGTCTGTTCTTCCACTAATCAAGGTTGCTGGTTTCAGAACAGTGTTCCAAAAGTGCATGGACCCTAAAGCAGTTGGGAGAATTCCTAAAGAAGAGATGTTTCGGTTCTCGCACATTGTCCCCAGTCAATTGCTTACAGGTGCAGAAGCTCATAATGCTCCAAAAGGTTGCTTCGAATTGGATCCAGCAGCTATTCCTTTGCACCTCCTCGAGGGGATAACAGAAGATAATCAGGCAGCAATGGCAGAGAATGTTGGCAAAACAAAGGAAGAGGTGTTTCAAAGTGCCTCGACTAGAGAGGTAGATGCAGGAATGGAAGAAAGGGAGATTTCAGAAAGCGGAAGACAACCAATGGGGGTAGGCAATAGTGCATACCTAGTTGGCCAAGGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

DUF3444 DnaJ

Protein Analysis

768

Amino Acids

85.77

Weight (kDa)

8.83

Isoelectric Point (pI)

41.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	83 - 144	2.2e-19	DnaJ domain
Zn_ribbon_20	PF23551	204 - 238	7.9e-10	Zinc beta-ribbon domain
DUF3444	PF11926	482 - 686	6.9e-71	Domain of unknown function (DUF3444)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25560 AT5G53150 AT5G53150 AT5G53150 AT5G53150 AT5G53150 AT5G53150
fragaria_vesca	FvH4_7g31170
malus_domestica	MD01G1216400.v1.1 MD07G1286200.v1.1
prunus_persica	Prupe.2G308400_v2.0.a1 Prupe.2G308400_v2.0.a1 Prupe.2G308400_v2.0.a1
pyrus_communis	pycom01g22710 pycom07g25950
rosa_chinensis	RchiOBHm_Chr1g0380211
rosa_laevigata	RLG00000026319
rosa_multiflora	Rmu_sc0001232.1_g000026
rosa_roxburghii	Rroxscaffold_4G00279560
rosa_rugosa	Rorug01G0419000
rosa_samantha	Rh1AG443900 Rh1BG398900 Rh1CG412300 Rh1DG429500
rosa_wichuraiana	Rw1G038550 Rw1G038620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	2120
AccB1I	GGYRCC	1 cut(s)	19
AccI	GTMKAC	1 cut(s)	808
AccII	CGCG	1 cut(s)	924
AciI	CCGC	3 cut(s)	245, 924, 2250
AclWI	GGATC	4 cut(s)	1451, 1491, 2087, 2100
AcoI	YGGCCR	1 cut(s)	2293
AcsI	RAATTY	5 cut(s)	47, 1054, 1197, 1723, 1992
AcuI	CTGAAG	1 cut(s)	1331
AcyI	GRCGYC	1 cut(s)	787
AdeI	CACNNNGTG	1 cut(s)	1912
AfaI	GTAC	2 cut(s)	520, 1174
AfiI	CCNNNNNNNGG	4 cut(s)	495, 496, 1830, 2122
AflIII	ACRYGT	1 cut(s)	689
AgsI	TTSAA	7 cut(s)	148, 533, 1066, 1082, 1505, 1620, 2192
AhlI	ACTAGT	1 cut(s)	917
AjnI	CCWGG	7 cut(s)	352, 514, 765, 1427, 1580, 1693, 1783
Alw21I	GWGCWC	2 cut(s)	484, 686
Alw26I	GTCTC	5 cut(s)	185, 354, 427, 988, 1003
AlwI	GGATC	4 cut(s)	1451, 1491, 2087, 2100
AlwNI	CAGNNNCTG	1 cut(s)	1331
Ama87I	CYCGRG	1 cut(s)	2120
AoxI	GGCC	3 cut(s)	1521, 1691, 2293
ApeKI	GCWGC	7 cut(s)	571, 722, 797, 950, 953, 2099, 2147
ApoI	RAATTY	5 cut(s)	47, 1054, 1197, 1723, 1992
AspLEI	GCGC	2 cut(s)	368, 571
AspS9I	GGNCC	4 cut(s)	578, 1521, 1821, 1972
AsuC2I	CCSGG	1 cut(s)	732
AsuHPI	GGTGA	2 cut(s)	1366, 1547
AsuII	TTCGAA	1 cut(s)	2085
AvaI	CYCGRG	1 cut(s)	2120
AvaII	GGWCC	3 cut(s)	578, 1821, 1972
AxyI	CCTNAGG	1 cut(s)	42
BalI	TGGCCA	1 cut(s)	2295
BamHI	GGATCC	1 cut(s)	2092
BanI	GGYRCC	1 cut(s)	19
BanII	GRGCYC	1 cut(s)	484
BbsI	GAAGAC	2 cut(s)	1896, 2260
Bbv12I	GWGCWC	2 cut(s)	484, 686
BbvI	GCAGC	7 cut(s)	583, 709, 784, 937, 965, 2111, 2159
BccI	CCATC	5 cut(s)	493, 1526, 1532, 1786, 1867
BceAI	ACGGC	2 cut(s)	582, 821
BciT130I	CCWGG	7 cut(s)	354, 516, 767, 1429, 1582, 1695, 1785
BciVI	GTATCC	2 cut(s)	174, 1103
BcnI	CCSGG	1 cut(s)	732
BcoDI	GTCTC	5 cut(s)	185, 354, 427, 988, 1003
BcuI	ACTAGT	1 cut(s)	917
BfaI	CTAG	8 cut(s)	110, 126, 750, 801, 918, 1212, 2205, 2288
BfmI	CTRYAG	2 cut(s)	711, 951
BfuI	GTATCC	2 cut(s)	174, 1103
BisI	GCNGC	7 cut(s)	572, 723, 798, 951, 954, 2100, 2148
BlpI	GCTNAGC	1 cut(s)	969
BlsI	GCNGC	7 cut(s)	573, 724, 799, 952, 955, 2101, 2149
Bme1390I	CCNGG	8 cut(s)	354, 516, 732, 767, 1429, 1582, 1695, 1785
Bme18I	GGWCC	3 cut(s)	578, 1821, 1972
BmeT110I	CYCGRG	1 cut(s)	2120
BmgT120I	GGNCC	4 cut(s)	578, 1521, 1821, 1972
BmiI	GGNNCC	5 cut(s)	21, 580, 1823, 1974, 2094
BmrFI	CCNGG	8 cut(s)	354, 516, 732, 767, 1429, 1582, 1695, 1785
BmrI	ACTGGG	1 cut(s)	2028
BmsI	GCATC	7 cut(s)	232, 947, 1343, 1414, 1533, 1611, 2206
BmuI	ACTGGG	1 cut(s)	2028
BpiI	GAAGAC	2 cut(s)	1896, 2260
BplI	GAGNNNNNCTC	6 cut(s)	167, 199, 952, 984, 1307, 1339
BpmI	CTGGAG	2 cut(s)	1164, 1564
Bpu10I	CCTNAGC	2 cut(s)	84, 168
Bpu1102I	GCTNAGC	1 cut(s)	969
Bpu14I	TTCGAA	1 cut(s)	2085
BpuEI	CTTGAG	1 cut(s)	194
BpuMI	CCSGG	1 cut(s)	732
BsaBI	GATNNNNATC	3 cut(s)	1089, 1482, 1833
BsaHI	GRCGYC	1 cut(s)	787
BsaI	GGTCTC	1 cut(s)	185
BsaJI	CCNNGG	3 cut(s)	790, 1302, 2296
BsaXI	ACNNNNNCTCC	2 cut(s)	998, 1028
Bsc4I	CCNNNNNNNGG	4 cut(s)	495, 496, 1830, 2122
Bse1I	ACTGG	4 cut(s)	21, 646, 1655, 2034
Bse21I	CCTNAGG	1 cut(s)	42
Bse3DI	GCAATG	1 cut(s)	2157
Bse8I	GATNNNNATC	3 cut(s)	1089, 1482, 1833
BseBI	CCWGG	7 cut(s)	354, 516, 767, 1429, 1582, 1695, 1785
BseDI	CCNNGG	3 cut(s)	790, 1302, 2296
BseGI	GGATG	5 cut(s)	331, 485, 663, 1548, 1709
BseJI	GATNNNNATC	3 cut(s)	1089, 1482, 1833
BseLI	CCNNNNNNNGG	4 cut(s)	495, 496, 1830, 2122
BseMI	GCAATG	1 cut(s)	2157
BseMII	CTCAG	8 cut(s)	33, 159, 337, 375, 667, 983, 1338, 1890
BseNI	ACTGG	4 cut(s)	21, 646, 1655, 2034
BseRI	GAGGAG	3 cut(s)	1019, 1364, 2108
BseXI	GCAGC	7 cut(s)	583, 709, 784, 937, 965, 2111, 2159
BseYI	CCCAGC	1 cut(s)	1391
BsgI	GTGCAG	3 cut(s)	378, 708, 2073
Bsh1236I	CGCG	1 cut(s)	924
BshFI	GGCC	3 cut(s)	1523, 1693, 2295
BshNI	GGYRCC	1 cut(s)	19
BsiHKAI	GWGCWC	2 cut(s)	484, 686
BsiHKCI	CYCGRG	1 cut(s)	2120
BsiSI	CCGG	1 cut(s)	732
BslFI	GGGAC	4 cut(s)	564, 1408, 1807, 2015
BslI	CCNNNNNNNGG	4 cut(s)	495, 496, 1830, 2122
BsmAI	GTCTC	5 cut(s)	185, 354, 427, 988, 1003
BsmFI	GGGAC	4 cut(s)	564, 1408, 1807, 2015
BsnI	GGCC	3 cut(s)	1523, 1693, 2295
Bso31I	GGTCTC	1 cut(s)	185
BsoBI	CYCGRG	1 cut(s)	2120
Bsp119I	TTCGAA	1 cut(s)	2085
Bsp1286I	GDGCHC	2 cut(s)	484, 686
Bsp143I	GATC	5 cut(s)	1084, 1456, 1483, 1575, 2092
Bsp1720I	GCTNAGC	1 cut(s)	969
BspACI	CCGC	3 cut(s)	245, 924, 2250
BspANI	GGCC	3 cut(s)	1523, 1693, 2295
BspCNI	CTCAG	8 cut(s)	34, 160, 336, 376, 666, 982, 1337, 1891
BspFNI	CGCG	1 cut(s)	924
BspHI	TCATGA	1 cut(s)	1255
BspLI	GGNNCC	5 cut(s)	21, 580, 1823, 1974, 2094
BspMAI	CTGCAG	1 cut(s)	955
BspPI	GGATC	4 cut(s)	1451, 1491, 2087, 2100
BspT104I	TTCGAA	1 cut(s)	2085
BspT107I	GGYRCC	1 cut(s)	19
BspTNI	GGTCTC	1 cut(s)	185
BsrDI	GCAATG	1 cut(s)	2157
BsrI	ACTGG	4 cut(s)	21, 646, 1655, 2034
BssECI	CCNNGG	3 cut(s)	790, 1302, 2296
BssMI	GATC	5 cut(s)	1084, 1456, 1483, 1575, 2092
BssNI	GRCGYC	1 cut(s)	787
BssT1I	CCWWGG	2 cut(s)	1302, 2296
Bst2UI	CCWGG	7 cut(s)	354, 516, 767, 1429, 1582, 1695, 1785
Bst4CI	ACNGT	8 cut(s)	192, 306, 794, 934, 1014, 1409, 1910, 1954
Bst6I	CTCTTC	3 cut(s)	986, 1998, 2175
BstACI	GRCGYC	1 cut(s)	787
BstAPI	GCANNNNNTGC	2 cut(s)	630, 1270
BstBI	TTCGAA	1 cut(s)	2085
BstC8I	GCNNGC	2 cut(s)	975, 1610
BstDSI	CCRYGG	1 cut(s)	790
BstENI	CCTNNNNNAGG	1 cut(s)	2120
BstF5I	GGATG	5 cut(s)	331, 485, 663, 1548, 1709
BstFNI	CGCG	1 cut(s)	924
BstHHI	GCGC	2 cut(s)	368, 571
BstKTI	GATC	5 cut(s)	1087, 1459, 1486, 1578, 2095
BstMAI	GTCTC	5 cut(s)	185, 354, 427, 988, 1003
BstMBI	GATC	5 cut(s)	1084, 1456, 1483, 1575, 2092
BstMWI	GCNNNNNNNGC	9 cut(s)	80, 149, 287, 365, 630, 974, 1270, 2066, 2153
BstNI	CCWGG	7 cut(s)	354, 516, 767, 1429, 1582, 1695, 1785
BstNSI	RCATGY	2 cut(s)	563, 693
BstSCI	CCNGG	8 cut(s)	352, 514, 730, 765, 1427, 1580, 1693, 1783
BstSFI	CTRYAG	2 cut(s)	711, 951
BstUI	CGCG	1 cut(s)	924
BstV1I	GCAGC	7 cut(s)	583, 709, 784, 937, 965, 2111, 2159
BstV2I	GAAGAC	2 cut(s)	1896, 2260
BstX2I	RGATCY	1 cut(s)	2092
BstYI	RGATCY	1 cut(s)	2092
Bsu36I	CCTNAGG	1 cut(s)	42
BsuI	GTATCC	2 cut(s)	174, 1103
BsuRI	GGCC	3 cut(s)	1523, 1693, 2295
BtgI	CCRYGG	1 cut(s)	790
BtsCI	GGATG	5 cut(s)	331, 485, 663, 1548, 1709
BtsIMutI	CAGTG	4 cut(s)	879, 930, 1414, 1959
Cac8I	GCNNGC	2 cut(s)	975, 1610
CaiI	CAGNNNCTG	1 cut(s)	1331
CciI	TCATGA	1 cut(s)	1255
CfoI	GCGC	2 cut(s)	368, 571
Cfr13I	GGNCC	4 cut(s)	578, 1521, 1821, 1972
CseI	GACGC	1 cut(s)	795
CsiI	ACCWGGT	1 cut(s)	514
Csp6I	GTAC	2 cut(s)	519, 1173
CviAII	CATG	9 cut(s)	560, 575, 583, 679, 690, 1114, 1256, 1763, 1969
CviQI	GTAC	2 cut(s)	519, 1173
DpnI	GATC	5 cut(s)	1086, 1458, 1485, 1577, 2094
DpnII	GATC	5 cut(s)	1084, 1456, 1483, 1575, 2092
DraI	TTTAAA	2 cut(s)	1594, 1722
DraIII	CACNNNGTG	1 cut(s)	1912
EaeI	YGGCCR	1 cut(s)	2293
Eam1104I	CTCTTC	3 cut(s)	986, 1998, 2175
EarI	CTCTTC	3 cut(s)	986, 1998, 2175
Ecl136II	GAGCTC	1 cut(s)	482
Eco130I	CCWWGG	2 cut(s)	1302, 2296
Eco147I	AGGCCT	1 cut(s)	1693
Eco24I	GRGCYC	1 cut(s)	484
Eco31I	GGTCTC	1 cut(s)	185
Eco47I	GGWCC	3 cut(s)	578, 1821, 1972
Eco53kI	GAGCTC	1 cut(s)	482
Eco57I	CTGAAG	1 cut(s)	1331
Eco81I	CCTNAGG	1 cut(s)	42
Eco88I	CYCGRG	1 cut(s)	2120
EcoICRI	GAGCTC	1 cut(s)	482
EcoNI	CCTNNNNNAGG	1 cut(s)	2120
EcoRI	GAATTC	2 cut(s)	1054, 1992
EcoRII	CCWGG	7 cut(s)	352, 514, 765, 1427, 1580, 1693, 1783
EcoT14I	CCWWGG	2 cut(s)	1302, 2296
EcoT38I	GRGCYC	1 cut(s)	484
ErhI	CCWWGG	2 cut(s)	1302, 2296
FaeI	CATG	9 cut(s)	563, 578, 586, 682, 693, 1117, 1259, 1766, 1972
FalI	AAGNNNNNCTT	2 cut(s)	872, 904
FaqI	GGGAC	4 cut(s)	564, 1408, 1807, 2015
FatI	CATG	9 cut(s)	559, 574, 582, 678, 689, 1113, 1255, 1762, 1968
FauNDI	CATATG	2 cut(s)	592, 1528
FblI	GTMKAC	1 cut(s)	808
Fnu4HI	GCNGC	7 cut(s)	572, 723, 798, 951, 954, 2100, 2148
FokI	GGATG	5 cut(s)	318, 472, 670, 1555, 1696
FriOI	GRGCYC	1 cut(s)	484
Fsp4HI	GCNGC	7 cut(s)	572, 723, 798, 951, 954, 2100, 2148
FspBI	CTAG	8 cut(s)	110, 126, 750, 801, 918, 1212, 2205, 2288
GlaI	GCGC	2 cut(s)	367, 570
GluI	GCNGC	7 cut(s)	572, 723, 798, 951, 954, 2100, 2148
GsaI	CCCAGC	1 cut(s)	1395
GsuI	CTGGAG	2 cut(s)	1164, 1564
HaeIII	GGCC	3 cut(s)	1523, 1693, 2295
HapII	CCGG	1 cut(s)	732
HgaI	GACGC	1 cut(s)	795
HhaI	GCGC	2 cut(s)	368, 571
Hin1I	GRCGYC	1 cut(s)	787
Hin1II	CATG	9 cut(s)	563, 578, 586, 682, 693, 1117, 1259, 1766, 1972
Hin6I	GCGC	2 cut(s)	366, 569
HinP1I	GCGC	2 cut(s)	366, 569
HincII	GTYRAC	1 cut(s)	195
HindII	GTYRAC	1 cut(s)	195
HinfI	GANTC	8 cut(s)	37, 271, 467, 743, 1036, 1166, 1771, 1834
HpaII	CCGG	1 cut(s)	732
HphI	GGTGA	2 cut(s)	1366, 1547
Hpy166II	GTNNAC	2 cut(s)	195, 809
Hpy8I	GTNNAC	2 cut(s)	195, 809
Hpy99I	CGWCG	2 cut(s)	477, 1424
HpyAV	CCTTC	7 cut(s)	142, 356, 691, 898, 1100, 1306, 1732
HpyCH4III	ACNGT	8 cut(s)	192, 306, 794, 934, 1014, 1409, 1910, 1954
HpyCH4IV	ACGT	2 cut(s)	638, 1702
HpyF10VI	GCNNNNNNNGC	9 cut(s)	80, 149, 287, 365, 630, 974, 1270, 2066, 2153
HpySE526I	ACGT	2 cut(s)	638, 1702
Hsp92I	GRCGYC	1 cut(s)	787
Hsp92II	CATG	9 cut(s)	563, 578, 586, 682, 693, 1117, 1259, 1766, 1972
HspAI	GCGC	2 cut(s)	366, 569
Kzo9I	GATC	5 cut(s)	1084, 1456, 1483, 1575, 2092
LmnI	GCTCC	6 cut(s)	111, 479, 487, 1145, 1315, 2074
Lsp1109I	GCAGC	7 cut(s)	583, 709, 784, 937, 965, 2111, 2159
LweI	GCATC	7 cut(s)	232, 947, 1343, 1414, 1533, 1611, 2206
MabI	ACCWGGT	1 cut(s)	514
MaeI	CTAG	8 cut(s)	110, 126, 750, 801, 918, 1212, 2205, 2288
MaeII	ACGT	2 cut(s)	638, 1702
MaeIII	GTNAC	2 cut(s)	538, 550
MalI	GATC	5 cut(s)	1086, 1458, 1485, 1577, 2094
MboI	GATC	5 cut(s)	1084, 1456, 1483, 1575, 2092
MfeI	CAATTG	1 cut(s)	2039
MflI	RGATCY	1 cut(s)	2092
MhlI	GDGCHC	2 cut(s)	484, 686
MlsI	TGGCCA	1 cut(s)	2295
MluNI	TGGCCA	1 cut(s)	2295
MlyI	GAGTC	1 cut(s)	752
MmeI	TCCRAC	3 cut(s)	14, 916, 1727
Mox20I	TGGCCA	1 cut(s)	2295
MscI	TGGCCA	1 cut(s)	2295
MseI	TTAA	8 cut(s)	372, 816, 1046, 1095, 1442, 1593, 1614, 1721
MslI	CAYNNNNRTG	2 cut(s)	591, 1095
Msp20I	TGGCCA	1 cut(s)	2295
MspA1I	CMGCKG	3 cut(s)	722, 956, 1608
MspI	CCGG	1 cut(s)	732
MspR9I	CCNGG	8 cut(s)	354, 516, 732, 767, 1429, 1582, 1695, 1785
MunI	CAATTG	1 cut(s)	2039
MvaI	CCWGG	7 cut(s)	354, 516, 767, 1429, 1582, 1695, 1785
MvnI	CGCG	1 cut(s)	924
MwoI	GCNNNNNNNGC	9 cut(s)	80, 149, 287, 365, 630, 974, 1270, 2066, 2153
NciI	CCSGG	1 cut(s)	732
NdeI	CATATG	2 cut(s)	592, 1528
NdeII	GATC	5 cut(s)	1084, 1456, 1483, 1575, 2092
NlaIII	CATG	9 cut(s)	563, 578, 586, 682, 693, 1117, 1259, 1766, 1972
NlaIV	GGNNCC	5 cut(s)	21, 580, 1823, 1974, 2094
NmeAIII	GCCGAG	1 cut(s)	121
NspI	RCATGY	2 cut(s)	563, 693
NspV	TTCGAA	1 cut(s)	2085
PaeR7I	CTCGAG	1 cut(s)	2120
PagI	TCATGA	1 cut(s)	1255
PceI	AGGCCT	1 cut(s)	1693
PciI	ACATGT	1 cut(s)	689
PfeI	GAWTC	7 cut(s)	37, 271, 467, 1036, 1166, 1771, 1834
PfoI	TCCNGGA	2 cut(s)	1580, 1783
PkrI	GCNGC	7 cut(s)	573, 724, 799, 952, 955, 2101, 2149
PleI	GAGTC	1 cut(s)	751
PpsI	GAGTC	1 cut(s)	751
PscI	ACATGT	1 cut(s)	689
Psp124BI	GAGCTC	1 cut(s)	484
Psp6I	CCWGG	7 cut(s)	352, 514, 765, 1427, 1580, 1693, 1783
PspFI	CCCAGC	1 cut(s)	1391
PspGI	CCWGG	7 cut(s)	352, 514, 765, 1427, 1580, 1693, 1783
PspN4I	GGNNCC	5 cut(s)	21, 580, 1823, 1974, 2094
PspPI	GGNCC	4 cut(s)	578, 1521, 1821, 1972
PspXI	VCTCGAGB	1 cut(s)	2120
PsrI	GAACNNNNNNTAC	2 cut(s)	589, 621
PstI	CTGCAG	1 cut(s)	955
PstNI	CAGNNNCTG	1 cut(s)	1331
PsuI	RGATCY	1 cut(s)	2092
PvuII	CAGCTG	3 cut(s)	722, 956, 1608
RsaI	GTAC	2 cut(s)	520, 1174
RsaNI	GTAC	2 cut(s)	519, 1173
RseI	CAYNNNNRTG	2 cut(s)	591, 1095
SacI	GAGCTC	1 cut(s)	484
SaqAI	TTAA	8 cut(s)	372, 816, 1046, 1095, 1442, 1593, 1614, 1721
SatI	GCNGC	7 cut(s)	572, 723, 798, 951, 954, 2100, 2148
Sau3AI	GATC	5 cut(s)	1084, 1456, 1483, 1575, 2092
Sau96I	GGNCC	4 cut(s)	578, 1521, 1821, 1972
SchI	GAGTC	1 cut(s)	752
ScrFI	CCNGG	8 cut(s)	354, 516, 732, 767, 1429, 1582, 1695, 1785
SduI	GDGCHC	2 cut(s)	484, 686
SexAI	ACCWGGT	1 cut(s)	514
SfaNI	GCATC	7 cut(s)	232, 947, 1343, 1414, 1533, 1611, 2206
SfcI	CTRYAG	2 cut(s)	711, 951
Sfr274I	CTCGAG	1 cut(s)	2120
SfuI	TTCGAA	1 cut(s)	2085
SinI	GGWCC	3 cut(s)	578, 1821, 1972
SlaI	CTCGAG	1 cut(s)	2120
SmiI	ATTTAAAT	1 cut(s)	1594
SmiMI	CAYNNNNRTG	2 cut(s)	591, 1095
SmlI	CTYRAG	2 cut(s)	173, 2120
SmoI	CTYRAG	2 cut(s)	173, 2120
SpeI	ACTAGT	1 cut(s)	917
SseBI	AGGCCT	1 cut(s)	1693
SsiI	CCGC	3 cut(s)	245, 924, 2250
SspMI	CTAG	8 cut(s)	110, 126, 750, 801, 918, 1212, 2205, 2288
SstI	GAGCTC	1 cut(s)	484
StuI	AGGCCT	1 cut(s)	1693
StyD4I	CCNGG	8 cut(s)	352, 514, 730, 765, 1427, 1580, 1693, 1783
StyI	CCWWGG	2 cut(s)	1302, 2296
SwaI	ATTTAAAT	1 cut(s)	1594
TaaI	ACNGT	8 cut(s)	192, 306, 794, 934, 1014, 1409, 1910, 1954
TaiI	ACGT	2 cut(s)	641, 1705
TaqI	TCGA	5 cut(s)	844, 1486, 2085, 2121, 2201
TfiI	GAWTC	7 cut(s)	37, 271, 467, 1036, 1166, 1771, 1834
Tru1I	TTAA	8 cut(s)	372, 816, 1046, 1095, 1442, 1593, 1614, 1721
Tru9I	TTAA	8 cut(s)	372, 816, 1046, 1095, 1442, 1593, 1614, 1721
TscAI	CASTG	4 cut(s)	879, 937, 1414, 1959
TseI	GCWGC	7 cut(s)	571, 722, 797, 950, 953, 2099, 2147
TspDTI	ATGAA	7 cut(s)	320, 1050, 1272, 1292, 1457, 1632, 1866
TspRI	CASTG	4 cut(s)	879, 937, 1414, 1959
VpaK11BI	GGWCC	3 cut(s)	578, 1821, 1972
XagI	CCTNNNNNAGG	1 cut(s)	2120
XapI	RAATTY	5 cut(s)	47, 1054, 1197, 1723, 1992
XceI	RCATGY	2 cut(s)	563, 693
XcmI	CCANNNNNNNNNTGG	1 cut(s)	30
XhoI	CTCGAG	1 cut(s)	2120
XmiI	GTMKAC	1 cut(s)	808
XspI	CTAG	8 cut(s)	110, 126, 750, 801, 918, 1212, 2205, 2288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.