Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0006456

Physical Location & Seq

Genomic Coordinates Forward (+)

2335259 .. 2338839

Gene Structure 3581 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00279560.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2262 bp

ATGGATTGCAATAAAAGTGAGGCAGTCAGGGCTAAGGAACTTGCCGAGAGGAAGCTCCTAGAAAGAAATTATGCTAGTGCAAAGAAGATTGCTTTGAAGGCTCAAAAGTTGTATCCTGAGCTTGAGGGTCTCTCCCAACTGTTGACAATAATAGATATTTATATCTGTGGAGAAAACAAAACTATTGGAGATGCAGATTGGTATGGAATACTTGGTGTGATTCCTTATGCCAAGTATGCACTCATTAGGAAACAGTATATAAAGTTGGCTCTCAGGCTTCATCCTGATAAAAACAAGTCTCCTGGTGCAGAAGGTGCATTTAAGCTGGTTTCTGAGGCGTGGAACTTGTTGTCGGATAAGGCTAAGAGAGAAGAATACGAGAGACTAACATATTACCACAATAGGAACTTGGAAGAATCTCGTCGGGGAGCTCCATCCCATTCTGGGGGTCTTTCAGAACAACTTGGTACAAATGCCTTTCAAAATGTTACAAATAGTGTAACTTCACATGCTACGGCACAGCATGGTCCCATGCACTCATATGGAACACCTACTACTTTCTGGACGATTTGCAATCTGTGCAAGACGTATTACCAGTATCTCAGGATGTATCTAAATCAAACTCTCATGTGCTCTACATGTCAGAAGGGGTTTAGTGCTATAGAAACAGCTGCACCTCCCGGTGTTTCCGAGTCATCTAGTAGTTCTTGCCAGGAACATCACACTACAAGACGCCACGGTGCTGCTAGTGGTAGACCTTTTAATTCTGCAAGAAACAATGCTGTAGCTCGAAATTTGGGAAATAAGGGGTCTTTCGCTTTTAAATCAGTGAATAAGGCAACCTTCCAACAGAGCTCTTTCTCCAAAATGACTAGTCACGGTAGCACTGTTGCATCAGGTTGTGCGGCAGCTGTGAGTGTGGCTCAGCAGGCAAATGAGAAAGTGAAGATACAGCGAGAGGAGAGACAGTCAATCGCTGAATGGGAGAGGAATCAAAAGTTAATGGGGAATTCTTCATTCAAAAAGAAGAGAATTGAAGATAAACATCTTAATGGTTGCGAAGGATACATGGCTAATAATATCGCCATAGGAAATGCTGGAGCTGACTTAGGAGTATCTGAATCAGGTACAGGTAATGTTGGCACAAAAAGAATTTATGGTTTCTCTAGCATAGATAATATGCCTAACTGCAAGAGAGAGTTATCCTATCATGAAATGCAAAATATGCTGATGAAGAAAGCACGAACTGATATTTCCAAGGTTCTGAAGGAGCAGAGCTCAGCTACTGCATTAAAGAAACAAGAGGAGGTGAAAGTAGATAAGAAACAGAAGAATGTGGTATATGCTGGGACAGAGGAAAACAGTGATAATGGCGACGATGCCAGGTCGTCAATCTTAACTAATGTTCCTGATCCTGATTTTCATAATTTTGATTTGGATCGAACTGAAAGTTCGTTTCAAGCAGAACAAGTCTGGGCCACATATGATGGTGATGGGATGCCTCGTTATTATGCTCGTATTCAGAATGTGATCTCCAGGAAGCCATTTAAATTGTGCATCAGCTGGCTTAATTCAAGAAGCAACTCTGAATTGGGTTCATTGGACTGGATAGGTTCTGGTTTCGCTAAAACCTGCGGGGATTTTAGGCCTGGCAAACGTCAGACATCCAAAACTTTAAATTCTTTCTGCAAGAAGGTTAGTTGGAAAAAAGTTGCACATGGAATGATTCGCATATTTCCTGGAAAGATGGAAGTCTGGGCTTTATATAGAAATTGGTCCCCTGATTGGAATCAGCATACCCCCAATGAAGTAATTAACAAATATGAAATGGTGGAAGTGCTGGAAGACTTTACTGAGGACCACGGTGTGTCTGTTCTTCCACTAATTAAGGTTGCTGGTTTCAGAACAGTGTTCCAAAAGTGCATGGACCCTAAAGCAGTTAGGAGGATTCCTAAAGAAGAGATGTTTCGGTTCTCGCACATTGTCCCCAGTCAATTGCTTACAGGTGCAGAAGCTCATAATGCTCCAAAAGGTTGCTTCGAATTGGATCCAGCAGCTATTCCTTTGCACCTCCTCGAGGGGATGACAGAAGATAATCAGGCAGCAATGGCAGAGAATGTTGGCAAAGCAAAGGAAGAGGTGTTTCAAAGTGCCTCGACTAGAGAGGTAGATGCAGGAATGGAAGAAAGGGAGATTTCAGAAAGCGGAGGACAACCAATGGGGGTAGGCAATAGTGCATACCTAGTTGGCCAAGGAAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

DUF3444 DnaJ

Protein Analysis

753

Amino Acids

83.89

Weight (kDa)

8.86

Isoelectric Point (pI)

40.91

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DnaJ	PF00226	66 - 127	2.4e-19	DnaJ domain
Zn_ribbon_20	PF23551	187 - 221	7.8e-10	Zinc beta-ribbon domain
DUF3444	PF11926	467 - 671	2.1e-71	Domain of unknown function (DUF3444)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006456)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G25560 AT5G53150 AT5G53150 AT5G53150 AT5G53150 AT5G53150 AT5G53150
fragaria_vesca	FvH4_7g31170
malus_domestica	MD01G1216400.v1.1 MD07G1286200.v1.1
prunus_persica	Prupe.2G308400_v2.0.a1 Prupe.2G308400_v2.0.a1 Prupe.2G308400_v2.0.a1
pyrus_communis	pycom01g22710 pycom07g25950
rosa_chinensis	RchiOBHm_Chr1g0380211
rosa_laevigata	RLG00000026319
rosa_multiflora	Rmu_sc0001232.1_g000026
rosa_roxburghii	Rroxscaffold_4G00279560
rosa_rugosa	Rorug01G0419000
rosa_samantha	Rh1AG443900 Rh1BG398900 Rh1CG412300 Rh1DG429500
rosa_wichuraiana	Rw1G038550 Rw1G038620

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AbsI	CCTCGAGG	1 cut(s)	2075
Acc36I	ACCTGC	1 cut(s)	1640
AccI	GTMKAC	1 cut(s)	754
AciI	CCGC	3 cut(s)	905, 1635, 2205
AclWI	GGATC	4 cut(s)	1406, 1446, 2042, 2055
AcoI	YGGCCR	1 cut(s)	2248
AcsI	RAATTY	4 cut(s)	793, 1009, 1152, 1678
AcuI	CTGAAG	1 cut(s)	1286
AcyI	GRCGYC	1 cut(s)	733
AdeI	CACNNNGTG	1 cut(s)	1867
AfaI	GTAC	2 cut(s)	469, 1129
AfiI	CCNNNNNNNGG	4 cut(s)	444, 445, 1785, 2077
AflIII	ACRYGT	1 cut(s)	638
AgsI	TTSAA	7 cut(s)	97, 482, 1021, 1037, 1460, 1575, 2147
AhlI	ACTAGT	1 cut(s)	872
AjnI	CCWGG	6 cut(s)	301, 711, 1382, 1535, 1648, 1738
Alw21I	GWGCWC	4 cut(s)	433, 635, 857, 1280
Alw26I	GTCTC	4 cut(s)	134, 303, 376, 958
AlwI	GGATC	4 cut(s)	1406, 1446, 2042, 2055
AlwNI	CAGNNNCTG	1 cut(s)	1286
Ama87I	CYCGRG	1 cut(s)	2075
AoxI	GGCC	3 cut(s)	1476, 1646, 2248
ApeKI	GCWGC	5 cut(s)	671, 743, 908, 2054, 2102
ApoI	RAATTY	4 cut(s)	793, 1009, 1152, 1678
AspS9I	GGNCC	5 cut(s)	527, 1476, 1776, 1858, 1927
AsuC2I	CCSGG	1 cut(s)	681
AsuHPI	GGTGA	2 cut(s)	1321, 1502
AsuII	TTCGAA	1 cut(s)	2040
AvaI	CYCGRG	1 cut(s)	2075
AvaII	GGWCC	4 cut(s)	527, 1776, 1858, 1927
BalI	TGGCCA	1 cut(s)	2250
BamHI	GGATCC	1 cut(s)	2047
BanII	GRGCYC	3 cut(s)	433, 857, 1280
BbsI	GAAGAC	1 cut(s)	1851
Bbv12I	GWGCWC	4 cut(s)	433, 635, 857, 1280
BbvI	GCAGC	5 cut(s)	658, 730, 920, 2066, 2114
BccI	CCATC	4 cut(s)	442, 1481, 1487, 1741
BceAI	ACGGC	1 cut(s)	531
BciT130I	CCWGG	6 cut(s)	303, 713, 1384, 1537, 1650, 1740
BciVI	GTATCC	2 cut(s)	123, 1058
BcnI	CCSGG	1 cut(s)	681
BcoDI	GTCTC	4 cut(s)	134, 303, 376, 958
BcuI	ACTAGT	1 cut(s)	872
BfaI	CTAG	8 cut(s)	59, 75, 699, 747, 873, 1167, 2160, 2243
BfmI	CTRYAG	2 cut(s)	660, 783
BfuAI	ACCTGC	1 cut(s)	1640
BfuI	GTATCC	2 cut(s)	123, 1058
BisI	GCNGC	6 cut(s)	672, 744, 906, 909, 2055, 2103
BlpI	GCTNAGC	2 cut(s)	924, 1279
BlsI	GCNGC	6 cut(s)	673, 745, 907, 910, 2056, 2104
Bme1390I	CCNGG	7 cut(s)	303, 681, 713, 1384, 1537, 1650, 1740
Bme18I	GGWCC	4 cut(s)	527, 1776, 1858, 1927
BmeT110I	CYCGRG	1 cut(s)	2075
BmgT120I	GGNCC	5 cut(s)	527, 1476, 1776, 1858, 1927
BmiI	GGNNCC	4 cut(s)	529, 1778, 1929, 2049
BmrFI	CCNGG	7 cut(s)	303, 681, 713, 1384, 1537, 1650, 1740
BmrI	ACTGGG	1 cut(s)	1983
BmsI	GCATC	6 cut(s)	181, 902, 1369, 1488, 1566, 2161
BmuI	ACTGGG	1 cut(s)	1983
BpiI	GAAGAC	1 cut(s)	1851
BplI	GAGNNNNNCTC	6 cut(s)	116, 148, 907, 939, 1262, 1294
BpmI	CTGGAG	2 cut(s)	1119, 1519
Bpu10I	CCTNAGC	2 cut(s)	33, 117
Bpu1102I	GCTNAGC	2 cut(s)	924, 1279
Bpu14I	TTCGAA	1 cut(s)	2040
BpuEI	CTTGAG	1 cut(s)	143
BpuMI	CCSGG	1 cut(s)	681
BsaBI	GATNNNNATC	3 cut(s)	1044, 1437, 1788
BsaHI	GRCGYC	1 cut(s)	733
BsaI	GGTCTC	1 cut(s)	134
BsaJI	CCNNGG	4 cut(s)	736, 1257, 1861, 2251
BsaXI	ACNNNNNCTCC	2 cut(s)	953, 983
Bsc4I	CCNNNNNNNGG	4 cut(s)	444, 445, 1785, 2077
Bse1I	ACTGG	3 cut(s)	595, 1610, 1989
Bse3DI	GCAATG	1 cut(s)	2112
Bse8I	GATNNNNATC	3 cut(s)	1044, 1437, 1788
BseBI	CCWGG	6 cut(s)	303, 713, 1384, 1537, 1650, 1740
BseDI	CCNNGG	4 cut(s)	736, 1257, 1861, 2251
BseGI	GGATG	6 cut(s)	280, 434, 612, 1503, 1664, 2088
BseJI	GATNNNNATC	3 cut(s)	1044, 1437, 1788
BseLI	CCNNNNNNNGG	4 cut(s)	444, 445, 1785, 2077
BseMI	GCAATG	1 cut(s)	2112
BseMII	CTCAG	7 cut(s)	108, 286, 324, 616, 938, 1293, 1845
BseNI	ACTGG	3 cut(s)	595, 1610, 1989
BseRI	GAGGAG	3 cut(s)	974, 1319, 2063
BseXI	GCAGC	5 cut(s)	658, 730, 920, 2066, 2114
BseYI	CCCAGC	1 cut(s)	1346
BsgI	GTGCAG	3 cut(s)	327, 657, 2028
BshFI	GGCC	3 cut(s)	1478, 1648, 2250
BsiHKAI	GWGCWC	4 cut(s)	433, 635, 857, 1280
BsiHKCI	CYCGRG	1 cut(s)	2075
BsiSI	CCGG	1 cut(s)	681
BslFI	GGGAC	4 cut(s)	513, 1363, 1762, 1970
BslI	CCNNNNNNNGG	4 cut(s)	444, 445, 1785, 2077
BsmAI	GTCTC	4 cut(s)	134, 303, 376, 958
BsmFI	GGGAC	4 cut(s)	513, 1363, 1762, 1970
BsnI	GGCC	3 cut(s)	1478, 1648, 2250
Bso31I	GGTCTC	1 cut(s)	134
BsoBI	CYCGRG	1 cut(s)	2075
Bsp119I	TTCGAA	1 cut(s)	2040
Bsp1286I	GDGCHC	4 cut(s)	433, 635, 857, 1280
Bsp143I	GATC	4 cut(s)	1411, 1438, 1530, 2047
Bsp1720I	GCTNAGC	2 cut(s)	924, 1279
BspACI	CCGC	3 cut(s)	905, 1635, 2205
BspANI	GGCC	3 cut(s)	1478, 1648, 2250
BspCNI	CTCAG	7 cut(s)	109, 285, 325, 615, 937, 1292, 1846
BspHI	TCATGA	1 cut(s)	1210
BspLI	GGNNCC	4 cut(s)	529, 1778, 1929, 2049
BspMI	ACCTGC	1 cut(s)	1640
BspPI	GGATC	4 cut(s)	1406, 1446, 2042, 2055
BspT104I	TTCGAA	1 cut(s)	2040
BspTNI	GGTCTC	1 cut(s)	134
BsrDI	GCAATG	1 cut(s)	2112
BsrI	ACTGG	3 cut(s)	595, 1610, 1989
BssECI	CCNNGG	4 cut(s)	736, 1257, 1861, 2251
BssMI	GATC	4 cut(s)	1411, 1438, 1530, 2047
BssNI	GRCGYC	1 cut(s)	733
BssT1I	CCWWGG	2 cut(s)	1257, 2251
Bst2UI	CCWGG	6 cut(s)	303, 713, 1384, 1537, 1650, 1740
Bst4CI	ACNGT	9 cut(s)	141, 255, 740, 881, 889, 969, 1364, 1865, 1909
Bst6I	CTCTTC	3 cut(s)	1022, 1953, 2130
BstACI	GRCGYC	1 cut(s)	733
BstAPI	GCANNNNNTGC	3 cut(s)	314, 579, 1225
BstBI	TTCGAA	1 cut(s)	2040
BstC8I	GCNNGC	2 cut(s)	930, 1565
BstDSI	CCRYGG	2 cut(s)	736, 1861
BstENI	CCTNNNNNAGG	1 cut(s)	2075
BstF5I	GGATG	6 cut(s)	280, 434, 612, 1503, 1664, 2088
BstKTI	GATC	4 cut(s)	1414, 1441, 1533, 2050
BstMAI	GTCTC	4 cut(s)	134, 303, 376, 958
BstMBI	GATC	4 cut(s)	1411, 1438, 1530, 2047
BstMWI	GCNNNNNNNGC	9 cut(s)	29, 98, 236, 314, 579, 929, 1225, 2021, 2108
BstNI	CCWGG	6 cut(s)	303, 713, 1384, 1537, 1650, 1740
BstNSI	RCATGY	2 cut(s)	512, 642
BstSCI	CCNGG	7 cut(s)	301, 679, 711, 1382, 1535, 1648, 1738
BstSFI	CTRYAG	2 cut(s)	660, 783
BstV1I	GCAGC	5 cut(s)	658, 730, 920, 2066, 2114
BstV2I	GAAGAC	1 cut(s)	1851
BstX2I	RGATCY	1 cut(s)	2047
BstYI	RGATCY	1 cut(s)	2047
BsuI	GTATCC	2 cut(s)	123, 1058
BsuRI	GGCC	3 cut(s)	1478, 1648, 2250
BtgI	CCRYGG	2 cut(s)	736, 1861
BtsCI	GGATG	6 cut(s)	280, 434, 612, 1503, 1664, 2088
BtsIMutI	CAGTG	4 cut(s)	834, 885, 1369, 1914
BveI	ACCTGC	1 cut(s)	1640
Cac8I	GCNNGC	2 cut(s)	930, 1565
CaiI	CAGNNNCTG	1 cut(s)	1286
CciI	TCATGA	1 cut(s)	1210
Cfr13I	GGNCC	5 cut(s)	527, 1476, 1776, 1858, 1927
CseI	GACGC	1 cut(s)	741
Csp6I	GTAC	2 cut(s)	468, 1128
CviAII	CATG	9 cut(s)	509, 524, 532, 628, 639, 1069, 1211, 1718, 1924
CviQI	GTAC	2 cut(s)	468, 1128
DpnI	GATC	4 cut(s)	1413, 1440, 1532, 2049
DpnII	GATC	4 cut(s)	1411, 1438, 1530, 2047
DraI	TTTAAA	3 cut(s)	823, 1549, 1677
DraIII	CACNNNGTG	1 cut(s)	1867
EaeI	YGGCCR	1 cut(s)	2248
Eam1104I	CTCTTC	3 cut(s)	1022, 1953, 2130
EarI	CTCTTC	3 cut(s)	1022, 1953, 2130
Ecl136II	GAGCTC	3 cut(s)	431, 855, 1278
Eco130I	CCWWGG	2 cut(s)	1257, 2251
Eco147I	AGGCCT	1 cut(s)	1648
Eco24I	GRGCYC	3 cut(s)	433, 857, 1280
Eco31I	GGTCTC	1 cut(s)	134
Eco47I	GGWCC	4 cut(s)	527, 1776, 1858, 1927
Eco53kI	GAGCTC	3 cut(s)	431, 855, 1278
Eco57I	CTGAAG	1 cut(s)	1286
Eco88I	CYCGRG	1 cut(s)	2075
EcoICRI	GAGCTC	3 cut(s)	431, 855, 1278
EcoNI	CCTNNNNNAGG	1 cut(s)	2075
EcoRI	GAATTC	1 cut(s)	1009
EcoRII	CCWGG	6 cut(s)	301, 711, 1382, 1535, 1648, 1738
EcoT14I	CCWWGG	2 cut(s)	1257, 2251
EcoT38I	GRGCYC	3 cut(s)	433, 857, 1280
ErhI	CCWWGG	2 cut(s)	1257, 2251
FaeI	CATG	9 cut(s)	512, 527, 535, 631, 642, 1072, 1214, 1721, 1927
FalI	AAGNNNNNCTT	2 cut(s)	827, 859
FaqI	GGGAC	4 cut(s)	513, 1363, 1762, 1970
FatI	CATG	9 cut(s)	508, 523, 531, 627, 638, 1068, 1210, 1717, 1923
FauI	CCCGC	1 cut(s)	1628
FauNDI	CATATG	2 cut(s)	541, 1483
FblI	GTMKAC	1 cut(s)	754
Fnu4HI	GCNGC	6 cut(s)	672, 744, 906, 909, 2055, 2103
FokI	GGATG	6 cut(s)	267, 421, 619, 1510, 1651, 2095
FriOI	GRGCYC	3 cut(s)	433, 857, 1280
Fsp4HI	GCNGC	6 cut(s)	672, 744, 906, 909, 2055, 2103
FspBI	CTAG	8 cut(s)	59, 75, 699, 747, 873, 1167, 2160, 2243
GluI	GCNGC	6 cut(s)	672, 744, 906, 909, 2055, 2103
GsaI	CCCAGC	1 cut(s)	1350
GsuI	CTGGAG	2 cut(s)	1119, 1519
HaeIII	GGCC	3 cut(s)	1478, 1648, 2250
HapII	CCGG	1 cut(s)	681
HgaI	GACGC	1 cut(s)	741
Hin1I	GRCGYC	1 cut(s)	733
Hin1II	CATG	9 cut(s)	512, 527, 535, 631, 642, 1072, 1214, 1721, 1927
HincII	GTYRAC	1 cut(s)	144
HindII	GTYRAC	1 cut(s)	144
HinfI	GANTC	8 cut(s)	220, 416, 692, 991, 1121, 1726, 1789, 1948
HpaII	CCGG	1 cut(s)	681
HphI	GGTGA	2 cut(s)	1321, 1502
Hpy166II	GTNNAC	2 cut(s)	144, 755
Hpy188III	TCNNGA	8 cut(s)	116, 284, 562, 604, 1211, 1409, 1415, 1575
Hpy8I	GTNNAC	2 cut(s)	144, 755
Hpy99I	CGWCG	2 cut(s)	426, 1379
HpyAV	CCTTC	7 cut(s)	91, 305, 640, 853, 1055, 1261, 1687
HpyCH4III	ACNGT	9 cut(s)	141, 255, 740, 881, 889, 969, 1364, 1865, 1909
HpyCH4IV	ACGT	2 cut(s)	587, 1657
HpyF10VI	GCNNNNNNNGC	9 cut(s)	29, 98, 236, 314, 579, 929, 1225, 2021, 2108
HpySE526I	ACGT	2 cut(s)	587, 1657
Hsp92I	GRCGYC	1 cut(s)	733
Hsp92II	CATG	9 cut(s)	512, 527, 535, 631, 642, 1072, 1214, 1721, 1927
Kzo9I	GATC	4 cut(s)	1411, 1438, 1530, 2047
LmnI	GCTCC	6 cut(s)	60, 428, 436, 1100, 1270, 2029
Lsp1109I	GCAGC	5 cut(s)	658, 730, 920, 2066, 2114
LweI	GCATC	6 cut(s)	181, 902, 1369, 1488, 1566, 2161
MaeI	CTAG	8 cut(s)	59, 75, 699, 747, 873, 1167, 2160, 2243
MaeII	ACGT	2 cut(s)	587, 1657
MaeIII	GTNAC	3 cut(s)	487, 499, 875
MalI	GATC	4 cut(s)	1413, 1440, 1532, 2049
MboI	GATC	4 cut(s)	1411, 1438, 1530, 2047
MfeI	CAATTG	1 cut(s)	1994
MflI	RGATCY	1 cut(s)	2047
MhlI	GDGCHC	4 cut(s)	433, 635, 857, 1280
MlsI	TGGCCA	1 cut(s)	2250
MluNI	TGGCCA	1 cut(s)	2250
MlyI	GAGTC	1 cut(s)	701
MmeI	TCCRAC	3 cut(s)	333, 871, 1682
Mox20I	TGGCCA	1 cut(s)	2250
MscI	TGGCCA	1 cut(s)	2250
MslI	CAYNNNNRTG	2 cut(s)	540, 1050
Msp20I	TGGCCA	1 cut(s)	2250
MspA1I	CMGCKG	3 cut(s)	671, 911, 1563
MspI	CCGG	1 cut(s)	681
MspR9I	CCNGG	7 cut(s)	303, 681, 713, 1384, 1537, 1650, 1740
MunI	CAATTG	1 cut(s)	1994
MvaI	CCWGG	6 cut(s)	303, 713, 1384, 1537, 1650, 1740
MwoI	GCNNNNNNNGC	9 cut(s)	29, 98, 236, 314, 579, 929, 1225, 2021, 2108
NciI	CCSGG	1 cut(s)	681
NdeI	CATATG	2 cut(s)	541, 1483
NdeII	GATC	4 cut(s)	1411, 1438, 1530, 2047
NlaIII	CATG	9 cut(s)	512, 527, 535, 631, 642, 1072, 1214, 1721, 1927
NlaIV	GGNNCC	4 cut(s)	529, 1778, 1929, 2049
NmeAIII	GCCGAG	1 cut(s)	70
NmuCI	GTSAC	1 cut(s)	875
NspI	RCATGY	2 cut(s)	512, 642
NspV	TTCGAA	1 cut(s)	2040
PaeR7I	CTCGAG	1 cut(s)	2075
PagI	TCATGA	1 cut(s)	1210
PceI	AGGCCT	1 cut(s)	1648
PciI	ACATGT	1 cut(s)	638
PfeI	GAWTC	7 cut(s)	220, 416, 991, 1121, 1726, 1789, 1948
PfoI	TCCNGGA	2 cut(s)	1535, 1738
PkrI	GCNGC	6 cut(s)	673, 745, 907, 910, 2056, 2104
PleI	GAGTC	1 cut(s)	700
PpsI	GAGTC	1 cut(s)	700
PscI	ACATGT	1 cut(s)	638
Psp124BI	GAGCTC	3 cut(s)	433, 857, 1280
Psp6I	CCWGG	6 cut(s)	301, 711, 1382, 1535, 1648, 1738
PspFI	CCCAGC	1 cut(s)	1346
PspGI	CCWGG	6 cut(s)	301, 711, 1382, 1535, 1648, 1738
PspN4I	GGNNCC	4 cut(s)	529, 1778, 1929, 2049
PspPI	GGNCC	5 cut(s)	527, 1476, 1776, 1858, 1927
PspXI	VCTCGAGB	1 cut(s)	2075
PsrI	GAACNNNNNNTAC	2 cut(s)	538, 570
PstNI	CAGNNNCTG	1 cut(s)	1286
PsuI	RGATCY	1 cut(s)	2047
PvuII	CAGCTG	3 cut(s)	671, 911, 1563
RsaI	GTAC	2 cut(s)	469, 1129
RsaNI	GTAC	2 cut(s)	468, 1128
RseI	CAYNNNNRTG	2 cut(s)	540, 1050
SacI	GAGCTC	3 cut(s)	433, 857, 1280
SatI	GCNGC	6 cut(s)	672, 744, 906, 909, 2055, 2103
Sau3AI	GATC	4 cut(s)	1411, 1438, 1530, 2047
Sau96I	GGNCC	5 cut(s)	527, 1476, 1776, 1858, 1927
SchI	GAGTC	1 cut(s)	701
ScrFI	CCNGG	7 cut(s)	303, 681, 713, 1384, 1537, 1650, 1740
SduI	GDGCHC	4 cut(s)	433, 635, 857, 1280
SfaNI	GCATC	6 cut(s)	181, 902, 1369, 1488, 1566, 2161
SfcI	CTRYAG	2 cut(s)	660, 783
Sfr274I	CTCGAG	1 cut(s)	2075
SfuI	TTCGAA	1 cut(s)	2040
SinI	GGWCC	4 cut(s)	527, 1776, 1858, 1927
SlaI	CTCGAG	1 cut(s)	2075
SmiI	ATTTAAAT	1 cut(s)	1549
SmiMI	CAYNNNNRTG	2 cut(s)	540, 1050
SmlI	CTYRAG	2 cut(s)	122, 2075
SmoI	CTYRAG	2 cut(s)	122, 2075
SpeI	ACTAGT	1 cut(s)	872
SseBI	AGGCCT	1 cut(s)	1648
SsiI	CCGC	3 cut(s)	905, 1635, 2205
SspMI	CTAG	8 cut(s)	59, 75, 699, 747, 873, 1167, 2160, 2243
SstI	GAGCTC	3 cut(s)	433, 857, 1280
StuI	AGGCCT	1 cut(s)	1648
StyD4I	CCNGG	7 cut(s)	301, 679, 711, 1382, 1535, 1648, 1738
StyI	CCWWGG	2 cut(s)	1257, 2251
SwaI	ATTTAAAT	1 cut(s)	1549
TaaI	ACNGT	9 cut(s)	141, 255, 740, 881, 889, 969, 1364, 1865, 1909
TaiI	ACGT	2 cut(s)	590, 1660
TaqI	TCGA	5 cut(s)	790, 1441, 2040, 2076, 2156
TauI	GCSGC	1 cut(s)	908
TfiI	GAWTC	7 cut(s)	220, 416, 991, 1121, 1726, 1789, 1948
TscAI	CASTG	4 cut(s)	834, 892, 1369, 1914
TseFI	GTSAC	1 cut(s)	875
TseI	GCWGC	5 cut(s)	671, 743, 908, 2054, 2102
Tsp45I	GTSAC	1 cut(s)	875
TspDTI	ATGAA	8 cut(s)	269, 1005, 1227, 1247, 1412, 1587, 1821, 1839
TspRI	CASTG	4 cut(s)	834, 892, 1369, 1914
VpaK11BI	GGWCC	4 cut(s)	527, 1776, 1858, 1927
XagI	CCTNNNNNAGG	1 cut(s)	2075
XapI	RAATTY	4 cut(s)	793, 1009, 1152, 1678
XceI	RCATGY	2 cut(s)	512, 642
XhoI	CTCGAG	1 cut(s)	2075
XmiI	GTMKAC	1 cut(s)	754
XspI	CTAG	8 cut(s)	59, 75, 699, 747, 873, 1167, 2160, 2243

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.