RLG00000031539

G3BP-like protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
5985129 .. 5985549
421 bp
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UTR
Exon/CDS
Intron
RLM00000031539

Sequence Viewer

Length: 315 bp
ATGGCTATGCAGGGCAACAGTTGCAGCAGGTTATTGAATCTGAGAATATCACGGAGGATCCTGCTTCAGAGCTGTCTTAAAGGTTCATTTCAAAGTAGTGCAGGAATGTTGTACAAGTACACCTGCCTTCAATTGTTGAGGAACCTATTGGAGAGCCCCAGAAGCCGACCTTTACGCGTTGCTAAAGGACAATCTGCACCATTTGTGGCTCCTAAGCATTCAGTTTACAAGACTGCACCACTGGCTTCATATTGGAATGACTTTTCACAGTCTATTGCATTGTCCAATGCAGTTGAAAGGCCTCAGCAGAGATAG

Protein Analysis

105

Amino Acids

11.7

Weight (kDa)

10.72

Isoelectric Point (pI)

85.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 131
Acc36I ACCTGC 2 cut(s) 18, 131
AccII CGCG 1 cut(s) 177
AclWI GGATC 2 cut(s) 52, 65
AcuI CTGAAG 1 cut(s) 50
AfaI GTAC 2 cut(s) 113, 119
AflIII ACRYGT 1 cut(s) 175
AgsI TTSAA 4 cut(s) 37, 92, 131, 296
AluBI AGCT 1 cut(s) 72
AluI AGCT 1 cut(s) 72
AlwI GGATC 2 cut(s) 52, 65
AoxI GGCC 1 cut(s) 299
ApeKI GCWGC 1 cut(s) 24
BamHI GGATCC 1 cut(s) 57
BanII GRGCYC 1 cut(s) 158
BbvCI CCTCAGC 1 cut(s) 303
BbvI GCAGC 1 cut(s) 36
BfuAI ACCTGC 2 cut(s) 18, 131
BisI GCNGC 1 cut(s) 25
BlsI GCNGC 1 cut(s) 26
BmiI GGNNCC 3 cut(s) 59, 143, 210
Bpu10I CCTNAGC 2 cut(s) 213, 303
Bse1I ACTGG 1 cut(s) 246
BseMII CTCAG 1 cut(s) 32
BseNI ACTGG 1 cut(s) 246
BseXI GCAGC 1 cut(s) 36
BsgI GTGCAG 3 cut(s) 120, 180, 219
Bsh1236I CGCG 1 cut(s) 177
BshFI GGCC 1 cut(s) 301
BsmI GAATGC 1 cut(s) 217
BsnI GGCC 1 cut(s) 301
Bsp1286I GDGCHC 1 cut(s) 158
Bsp1407I TGTACA 1 cut(s) 111
Bsp143I GATC 1 cut(s) 57
BspANI GGCC 1 cut(s) 301
BspCNI CTCAG 1 cut(s) 33
BspFNI CGCG 1 cut(s) 177
BspLI GGNNCC 3 cut(s) 59, 143, 210
BspMI ACCTGC 2 cut(s) 18, 131
BspPI GGATC 2 cut(s) 52, 65
BsrGI TGTACA 1 cut(s) 111
BsrI ACTGG 1 cut(s) 246
BssMI GATC 1 cut(s) 57
Bst4CI ACNGT 2 cut(s) 20, 270
BstAPI GCANNNNNTGC 1 cut(s) 21
BstAUI TGTACA 1 cut(s) 111
BstDEI CTNAG 3 cut(s) 41, 213, 303
BstFNI CGCG 1 cut(s) 177
BstKTI GATC 1 cut(s) 60
BstMBI GATC 1 cut(s) 57
BstMWI GCNNNNNNNGC 3 cut(s) 21, 162, 242
BstUI CGCG 1 cut(s) 177
BstV1I GCAGC 1 cut(s) 36
BstX2I RGATCY 1 cut(s) 57
BstYI RGATCY 1 cut(s) 57
BsuRI GGCC 1 cut(s) 301
BtsIMutI CAGTG 1 cut(s) 239
BveI ACCTGC 2 cut(s) 18, 131
Csp6I GTAC 2 cut(s) 112, 118
CviJI RGCY 7 cut(s) 5, 72, 156, 165, 209, 245, 301
CviKI_1 RGCY 7 cut(s) 5, 72, 156, 165, 209, 245, 301
CviQI GTAC 2 cut(s) 112, 118
DdeI CTNAG 3 cut(s) 41, 213, 303
DpnI GATC 1 cut(s) 59
DpnII GATC 1 cut(s) 57
Eco147I AGGCCT 1 cut(s) 301
Eco24I GRGCYC 1 cut(s) 158
Eco57I CTGAAG 1 cut(s) 50
EcoT38I GRGCYC 1 cut(s) 158
FaiI YATR 2 cut(s) 8, 250
FalI AAGNNNNNCTT 2 cut(s) 154, 186
Fnu4HI GCNGC 1 cut(s) 25
FriOI GRGCYC 1 cut(s) 158
Fsp4HI GCNGC 1 cut(s) 25
GluI GCNGC 1 cut(s) 25
HaeIII GGCC 1 cut(s) 301
HinfI GANTC 1 cut(s) 37
Hpy166II GTNNAC 2 cut(s) 120, 226
Hpy188I TCNGA 2 cut(s) 42, 69
Hpy8I GTNNAC 2 cut(s) 120, 226
HpyAV CCTTC 1 cut(s) 137
HpyCH4III ACNGT 2 cut(s) 20, 270
HpyCH4V TGCA 7 cut(s) 10, 24, 101, 197, 236, 278, 290
HpyF10VI GCNNNNNNNGC 3 cut(s) 21, 162, 242
HpyF3I CTNAG 3 cut(s) 41, 213, 303
Kzo9I GATC 1 cut(s) 57
LmnI GCTCC 1 cut(s) 214
LpnPI CCDG 6 cut(s) 13, 74, 87, 136, 172, 227
Lsp1109I GCAGC 1 cut(s) 36
MalI GATC 1 cut(s) 59
MboI GATC 1 cut(s) 57
MfeI CAATTG 1 cut(s) 131
MflI RGATCY 1 cut(s) 57
MhlI GDGCHC 1 cut(s) 158
MluCI AATT 1 cut(s) 131
MluI ACGCGT 1 cut(s) 175
MnlI CCTC 3 cut(s) 48, 132, 312
MseI TTAA 1 cut(s) 78
MunI CAATTG 1 cut(s) 131
Mva1269I GAATGC 1 cut(s) 217
MvnI CGCG 1 cut(s) 177
MwoI GCNNNNNNNGC 3 cut(s) 21, 162, 242
NdeII GATC 1 cut(s) 57
NlaIV GGNNCC 3 cut(s) 59, 143, 210
PaqCI CACCTGC 1 cut(s) 131
PceI AGGCCT 1 cut(s) 301
PctI GAATGC 1 cut(s) 217
PfeI GAWTC 1 cut(s) 37
PkrI GCNGC 1 cut(s) 26
PspN4I GGNNCC 3 cut(s) 59, 143, 210
PsuI RGATCY 1 cut(s) 57
RsaI GTAC 2 cut(s) 113, 119
RsaNI GTAC 2 cut(s) 112, 118
SaqAI TTAA 1 cut(s) 78
SatI GCNGC 1 cut(s) 25
Sau3AI GATC 1 cut(s) 57
SduI GDGCHC 1 cut(s) 158
SetI ASST 6 cut(s) 32, 74, 85, 125, 147, 172
Sse9I AATT 1 cut(s) 131
SseBI AGGCCT 1 cut(s) 301
StuI AGGCCT 1 cut(s) 301
TaaI ACNGT 2 cut(s) 20, 270
TasI AATT 1 cut(s) 131
TatI WGTACW 2 cut(s) 111, 117
TfiI GAWTC 1 cut(s) 37
Tru1I TTAA 1 cut(s) 78
Tru9I TTAA 1 cut(s) 78
TscAI CASTG 1 cut(s) 246
TseI GCWGC 1 cut(s) 24
TspDTI ATGAA 2 cut(s) 75, 237
TspGWI ACGGA 1 cut(s) 67
TspRI CASTG 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.