Domain of unknown function (DUF2828)
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_laevigata | RLG00000029583 RLG00000029632 RLG00000031683 |
| rosa_multiflora | Rmu_sc0000670.1_g000015 Rmu_sc0004284.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00004070 Rroxscaffold_3G00225670 |
| rosa_samantha | Rh2BG087600 Rh2BG143500 Rh2BG172700 Rh3BG259600 Rh4DG167300 Rh5BG514500 Rh5BG535900 Rh5CG538100 Rh6AG162500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 499, 643 |
| AccII | CGCG | 1 cut(s) | 587 |
| AccIII | TCCGGA | 1 cut(s) | 723 |
| AciI | CCGC | 3 cut(s) | 209, 538, 685 |
| AcyI | GRCGYC | 1 cut(s) | 326 |
| AfaI | GTAC | 2 cut(s) | 337, 635 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 499, 505, 537, 643, 708 |
| AgsI | TTSAA | 1 cut(s) | 613 |
| AjiI | CACGTC | 1 cut(s) | 658 |
| AjnI | CCWGG | 1 cut(s) | 498 |
| AluBI | AGCT | 6 cut(s) | 119, 376, 380, 384, 434, 640 |
| AluI | AGCT | 6 cut(s) | 119, 376, 380, 384, 434, 640 |
| Alw21I | GWGCWC | 1 cut(s) | 436 |
| Alw26I | GTCTC | 1 cut(s) | 197 |
| Ama87I | CYCGRG | 1 cut(s) | 429 |
| Aor13HI | TCCGGA | 1 cut(s) | 723 |
| AoxI | GGCC | 1 cut(s) | 496 |
| ApeKI | GCWGC | 2 cut(s) | 113, 116 |
| AspLEI | GCGC | 1 cut(s) | 701 |
| AspS9I | GGNCC | 2 cut(s) | 423, 616 |
| AsuHPI | GGTGA | 2 cut(s) | 95, 438 |
| AsuNHI | GCTAGC | 3 cut(s) | 358, 376, 380 |
| AvaI | CYCGRG | 1 cut(s) | 429 |
| AvaII | GGWCC | 2 cut(s) | 423, 616 |
| BaeGI | GKGCMC | 1 cut(s) | 134 |
| BanII | GRGCYC | 2 cut(s) | 436, 551 |
| BbsI | GAAGAC | 2 cut(s) | 353, 408 |
| Bbv12I | GWGCWC | 1 cut(s) | 436 |
| BbvCI | CCTCAGC | 1 cut(s) | 294 |
| BbvI | GCAGC | 2 cut(s) | 125, 128 |
| BccI | CCATC | 2 cut(s) | 214, 710 |
| BceAI | ACGGC | 2 cut(s) | 222, 347 |
| BciT130I | CCWGG | 1 cut(s) | 500 |
| BcoDI | GTCTC | 1 cut(s) | 197 |
| BfaI | CTAG | 3 cut(s) | 359, 377, 381 |
| BisI | GCNGC | 3 cut(s) | 114, 117, 539 |
| BlsI | GCNGC | 3 cut(s) | 115, 118, 540 |
| Bme1390I | CCNGG | 1 cut(s) | 500 |
| Bme18I | GGWCC | 2 cut(s) | 423, 616 |
| BmeT110I | CYCGRG | 1 cut(s) | 429 |
| BmgBI | CACGTC | 1 cut(s) | 658 |
| BmgT120I | GGNCC | 2 cut(s) | 423, 616 |
| BmiI | GGNNCC | 3 cut(s) | 225, 406, 550 |
| BmrFI | CCNGG | 1 cut(s) | 500 |
| BmrI | ACTGGG | 1 cut(s) | 406 |
| BmtI | GCTAGC | 3 cut(s) | 362, 380, 384 |
| BmuI | ACTGGG | 1 cut(s) | 406 |
| BpiI | GAAGAC | 2 cut(s) | 353, 408 |
| Bpu10I | CCTNAGC | 1 cut(s) | 294 |
| BsaBI | GATNNNNATC | 3 cut(s) | 50, 72, 186 |
| BsaHI | GRCGYC | 1 cut(s) | 326 |
| BsaJI | CCNNGG | 2 cut(s) | 400, 493 |
| BsaWI | WCCGGW | 1 cut(s) | 723 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 445, 475, 617, 647 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 499, 505, 537, 643, 708 |
| Bse1I | ACTGG | 4 cut(s) | 85, 148, 412, 510 |
| Bse8I | GATNNNNATC | 3 cut(s) | 50, 72, 186 |
| BseAI | TCCGGA | 1 cut(s) | 723 |
| BseBI | CCWGG | 1 cut(s) | 500 |
| BseDI | CCNNGG | 2 cut(s) | 400, 493 |
| BseJI | GATNNNNATC | 3 cut(s) | 50, 72, 186 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 499, 505, 537, 643, 708 |
| BseMII | CTCAG | 2 cut(s) | 308, 588 |
| BseNI | ACTGG | 4 cut(s) | 85, 148, 412, 510 |
| BseRI | GAGGAG | 1 cut(s) | 397 |
| BseSI | GKGCMC | 1 cut(s) | 134 |
| BseXI | GCAGC | 2 cut(s) | 125, 128 |
| Bsh1236I | CGCG | 1 cut(s) | 587 |
| BshFI | GGCC | 1 cut(s) | 498 |
| BsiHKAI | GWGCWC | 1 cut(s) | 436 |
| BsiHKCI | CYCGRG | 1 cut(s) | 429 |
| BsiSI | CCGG | 3 cut(s) | 23, 702, 724 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 499, 505, 537, 643, 708 |
| BsmAI | GTCTC | 1 cut(s) | 197 |
| BsmBI | CGTCTC | 1 cut(s) | 197 |
| BsnI | GGCC | 1 cut(s) | 498 |
| BsoBI | CYCGRG | 1 cut(s) | 429 |
| Bsp1286I | GDGCHC | 3 cut(s) | 134, 436, 551 |
| Bsp13I | TCCGGA | 1 cut(s) | 723 |
| Bsp143I | GATC | 4 cut(s) | 73, 317, 627, 726 |
| Bsp19I | CCATGG | 1 cut(s) | 400 |
| BspACI | CCGC | 3 cut(s) | 209, 538, 685 |
| BspANI | GGCC | 1 cut(s) | 498 |
| BspCNI | CTCAG | 2 cut(s) | 307, 589 |
| BspEI | TCCGGA | 1 cut(s) | 723 |
| BspFNI | CGCG | 1 cut(s) | 587 |
| BspHI | TCATGA | 1 cut(s) | 366 |
| BspLI | GGNNCC | 3 cut(s) | 225, 406, 550 |
| BspOI | GCTAGC | 3 cut(s) | 362, 380, 384 |
| BspQI | GCTCTTC | 1 cut(s) | 12 |
| BsrI | ACTGG | 4 cut(s) | 85, 148, 412, 510 |
| BssECI | CCNNGG | 2 cut(s) | 400, 493 |
| BssMI | GATC | 4 cut(s) | 73, 317, 627, 726 |
| BssNI | GRCGYC | 1 cut(s) | 326 |
| BssT1I | CCWWGG | 2 cut(s) | 400, 493 |
| Bst2UI | CCWGG | 1 cut(s) | 500 |
| Bst6I | CTCTTC | 2 cut(s) | 12, 268 |
| BstACI | GRCGYC | 1 cut(s) | 326 |
| BstC8I | GCNNGC | 4 cut(s) | 360, 378, 382, 577 |
| BstDEI | CTNAG | 4 cut(s) | 104, 294, 314, 597 |
| BstDSI | CCRYGG | 1 cut(s) | 400 |
| BstFNI | CGCG | 1 cut(s) | 587 |
| BstHHI | GCGC | 1 cut(s) | 701 |
| BstKTI | GATC | 4 cut(s) | 76, 320, 630, 729 |
| BstMAI | GTCTC | 1 cut(s) | 197 |
| BstMBI | GATC | 4 cut(s) | 73, 317, 627, 726 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 555, 705 |
| BstNI | CCWGG | 1 cut(s) | 500 |
| BstSCI | CCNGG | 1 cut(s) | 498 |
| BstSLI | GKGCMC | 1 cut(s) | 134 |
| BstUI | CGCG | 1 cut(s) | 587 |
| BstV1I | GCAGC | 2 cut(s) | 125, 128 |
| BstV2I | GAAGAC | 2 cut(s) | 353, 408 |
| BstX2I | RGATCY | 1 cut(s) | 726 |
| BstYI | RGATCY | 1 cut(s) | 726 |
| BsuRI | GGCC | 1 cut(s) | 498 |
| BtgI | CCRYGG | 1 cut(s) | 400 |
| BtrI | CACGTC | 1 cut(s) | 658 |
| BtsI | GCAGTG | 1 cut(s) | 464 |
| BtsIMutI | CAGTG | 1 cut(s) | 464 |
| Cac8I | GCNNGC | 4 cut(s) | 360, 378, 382, 577 |
| CciI | TCATGA | 1 cut(s) | 366 |
| CfoI | GCGC | 1 cut(s) | 701 |
| Cfr13I | GGNCC | 2 cut(s) | 423, 616 |
| CseI | GACGC | 2 cut(s) | 334, 576 |
| Csp6I | GTAC | 2 cut(s) | 336, 634 |
| CviAII | CATG | 3 cut(s) | 367, 401, 631 |
| CviQI | GTAC | 2 cut(s) | 336, 634 |
| DdeI | CTNAG | 4 cut(s) | 104, 294, 314, 597 |
| DpnI | GATC | 4 cut(s) | 75, 319, 629, 728 |
| DpnII | GATC | 4 cut(s) | 73, 317, 627, 726 |
| Eam1104I | CTCTTC | 2 cut(s) | 12, 268 |
| EarI | CTCTTC | 2 cut(s) | 12, 268 |
| EciI | GGCGGA | 1 cut(s) | 224 |
| Ecl136II | GAGCTC | 1 cut(s) | 434 |
| Eco130I | CCWWGG | 2 cut(s) | 400, 493 |
| Eco147I | AGGCCT | 1 cut(s) | 498 |
| Eco24I | GRGCYC | 2 cut(s) | 436, 551 |
| Eco47I | GGWCC | 2 cut(s) | 423, 616 |
| Eco53kI | GAGCTC | 1 cut(s) | 434 |
| Eco88I | CYCGRG | 1 cut(s) | 429 |
| EcoICRI | GAGCTC | 1 cut(s) | 434 |
| EcoO109I | RGGNCCY | 1 cut(s) | 616 |
| EcoRII | CCWGG | 1 cut(s) | 498 |
| EcoT14I | CCWWGG | 2 cut(s) | 400, 493 |
| EcoT38I | GRGCYC | 2 cut(s) | 436, 551 |
| ErhI | CCWWGG | 2 cut(s) | 400, 493 |
| Esp3I | CGTCTC | 1 cut(s) | 197 |
| FaeI | CATG | 3 cut(s) | 370, 404, 634 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 511, 543 |
| FatI | CATG | 3 cut(s) | 366, 400, 630 |
| FauI | CCCGC | 1 cut(s) | 678 |
| FauNDI | CATATG | 2 cut(s) | 59, 533 |
| Fnu4HI | GCNGC | 3 cut(s) | 114, 117, 539 |
| FriOI | GRGCYC | 2 cut(s) | 436, 551 |
| Fsp4HI | GCNGC | 3 cut(s) | 114, 117, 539 |
| FspBI | CTAG | 3 cut(s) | 359, 377, 381 |
| GlaI | GCGC | 1 cut(s) | 700 |
| GluI | GCNGC | 3 cut(s) | 114, 117, 539 |
| HaeIII | GGCC | 1 cut(s) | 498 |
| HapII | CCGG | 3 cut(s) | 23, 702, 724 |
| HgaI | GACGC | 2 cut(s) | 334, 576 |
| HhaI | GCGC | 1 cut(s) | 701 |
| Hin1I | GRCGYC | 1 cut(s) | 326 |
| Hin1II | CATG | 3 cut(s) | 370, 404, 634 |
| Hin6I | GCGC | 1 cut(s) | 699 |
| HinP1I | GCGC | 1 cut(s) | 699 |
| HinfI | GANTC | 6 cut(s) | 68, 86, 95, 100, 482, 720 |
| HpaII | CCGG | 3 cut(s) | 23, 702, 724 |
| HphI | GGTGA | 2 cut(s) | 95, 438 |
| Hpy188I | TCNGA | 5 cut(s) | 73, 91, 516, 598, 625 |
| Hpy188III | TCNNGA | 3 cut(s) | 367, 429, 724 |
| Hpy99I | CGWCG | 1 cut(s) | 328 |
| HpyAV | CCTTC | 3 cut(s) | 277, 517, 667 |
| HpyCH4IV | ACGT | 1 cut(s) | 657 |
| HpyCH4V | TGCA | 3 cut(s) | 257, 278, 579 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 555, 705 |
| HpyF3I | CTNAG | 4 cut(s) | 104, 294, 314, 597 |
| HpySE526I | ACGT | 1 cut(s) | 657 |
| Hsp92I | GRCGYC | 1 cut(s) | 326 |
| Hsp92II | CATG | 3 cut(s) | 370, 404, 634 |
| HspAI | GCGC | 1 cut(s) | 699 |
| Kpn2I | TCCGGA | 1 cut(s) | 723 |
| Kzo9I | GATC | 4 cut(s) | 73, 317, 627, 726 |
| LguI | GCTCTTC | 1 cut(s) | 12 |
| LmnI | GCTCC | 4 cut(s) | 410, 439, 554, 711 |
| Lsp1109I | GCAGC | 2 cut(s) | 125, 128 |
| MaeI | CTAG | 3 cut(s) | 359, 377, 381 |
| MaeII | ACGT | 1 cut(s) | 657 |
| MaeIII | GTNAC | 1 cut(s) | 605 |
| MalI | GATC | 4 cut(s) | 75, 319, 629, 728 |
| MboI | GATC | 4 cut(s) | 73, 317, 627, 726 |
| MboII | GAAGA | 7 cut(s) | 29, 40, 185, 255, 358, 408, 676 |
| MfeI | CAATTG | 1 cut(s) | 273 |
| MflI | RGATCY | 1 cut(s) | 726 |
| MhlI | GDGCHC | 3 cut(s) | 134, 436, 551 |
| MluCI | AATT | 2 cut(s) | 147, 273 |
| MlyI | GAGTC | 1 cut(s) | 94 |
| MmeI | TCCRAC | 2 cut(s) | 216, 539 |
| MroI | TCCGGA | 1 cut(s) | 723 |
| MseI | TTAA | 1 cut(s) | 303 |
| MspI | CCGG | 3 cut(s) | 23, 702, 724 |
| MspR9I | CCNGG | 1 cut(s) | 500 |
| MunI | CAATTG | 1 cut(s) | 273 |
| MvaI | CCWGG | 1 cut(s) | 500 |
| MvnI | CGCG | 1 cut(s) | 587 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 555, 705 |
| NcoI | CCATGG | 1 cut(s) | 400 |
| NdeI | CATATG | 2 cut(s) | 59, 533 |
| NdeII | GATC | 4 cut(s) | 73, 317, 627, 726 |
| NheI | GCTAGC | 3 cut(s) | 358, 376, 380 |
| NlaIII | CATG | 3 cut(s) | 370, 404, 634 |
| NlaIV | GGNNCC | 3 cut(s) | 225, 406, 550 |
| PagI | TCATGA | 1 cut(s) | 366 |
| PceI | AGGCCT | 1 cut(s) | 498 |
| PciSI | GCTCTTC | 1 cut(s) | 12 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 427 |
| PfeI | GAWTC | 5 cut(s) | 68, 86, 95, 482, 720 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 499, 643 |
| PkrI | GCNGC | 3 cut(s) | 115, 118, 540 |
| PleI | GAGTC | 1 cut(s) | 94 |
| PpsI | GAGTC | 1 cut(s) | 94 |
| PpuMI | RGGWCCY | 1 cut(s) | 616 |
| Psp124BI | GAGCTC | 1 cut(s) | 436 |
| Psp5II | RGGWCCY | 1 cut(s) | 616 |
| Psp6I | CCWGG | 1 cut(s) | 498 |
| PspGI | CCWGG | 1 cut(s) | 498 |
| PspN4I | GGNNCC | 3 cut(s) | 225, 406, 550 |
| PspPI | GGNCC | 2 cut(s) | 423, 616 |
| PspPPI | RGGWCCY | 1 cut(s) | 616 |
| PsuI | RGATCY | 1 cut(s) | 726 |
| RsaI | GTAC | 2 cut(s) | 337, 635 |
| RsaNI | GTAC | 2 cut(s) | 336, 634 |
| SacI | GAGCTC | 1 cut(s) | 436 |
| SapI | GCTCTTC | 1 cut(s) | 12 |
| SaqAI | TTAA | 1 cut(s) | 303 |
| SatI | GCNGC | 3 cut(s) | 114, 117, 539 |
| Sau3AI | GATC | 4 cut(s) | 73, 317, 627, 726 |
| Sau96I | GGNCC | 2 cut(s) | 423, 616 |
| SchI | GAGTC | 1 cut(s) | 94 |
| ScrFI | CCNGG | 1 cut(s) | 500 |
| SduI | GDGCHC | 3 cut(s) | 134, 436, 551 |
| SinI | GGWCC | 2 cut(s) | 423, 616 |
| Sse9I | AATT | 2 cut(s) | 147, 273 |
| SseBI | AGGCCT | 1 cut(s) | 498 |
| SsiI | CCGC | 3 cut(s) | 209, 538, 685 |
| SspMI | CTAG | 3 cut(s) | 359, 377, 381 |
| SstI | GAGCTC | 1 cut(s) | 436 |
| StuI | AGGCCT | 1 cut(s) | 498 |
| StyD4I | CCNGG | 1 cut(s) | 498 |
| StyI | CCWWGG | 2 cut(s) | 400, 493 |
| TaiI | ACGT | 1 cut(s) | 660 |
| TaqI | TCGA | 3 cut(s) | 98, 323, 395 |
| TaqII | GACCGA | 1 cut(s) | 411 |
| TasI | AATT | 2 cut(s) | 147, 273 |
| TauI | GCSGC | 1 cut(s) | 541 |
| TfiI | GAWTC | 5 cut(s) | 68, 86, 95, 482, 720 |
| Tru1I | TTAA | 1 cut(s) | 303 |
| Tru9I | TTAA | 1 cut(s) | 303 |
| TscAI | CASTG | 1 cut(s) | 471 |
| TseI | GCWGC | 2 cut(s) | 113, 116 |
| TspDTI | ATGAA | 2 cut(s) | 186, 383 |
| TspRI | CASTG | 1 cut(s) | 471 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 499, 643 |
| VpaK11BI | GGWCC | 2 cut(s) | 423, 616 |
| XspI | CTAG | 3 cut(s) | 359, 377, 381 |