RLG00000034151

receptor-like protein 12

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0006873
Physical Location & Seq
Forward (+)
37389733 .. 37390092
360 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034151

Sequence Viewer

Length: 360 bp
ATGGCTAGATCACAGAGCCTTAATGATGGGACTGTTAAAGTTCATTCTTCCATTTCCTTGTTGCAGGAGAGGTTTAGGCAACTGCAGAGAGCGAAGGAGATGAGGGAGGAGAGAGAGCTCCTGAGGCAGCTCATAGCCGAATCTGCTGAGAGGGGTAATCAAACCCAAGCCGCCCCACATTTTGAGCAGAAGGACTTAGTGTTTCAATCTGAAATGACAGGTTCTCAGCGTAAGCCACAACCCCAAGCCTCAATGTACCTCCAACCCAGTTACTTGCAGAGCAAGCAAAATTATCAAGCCGTCATGCGCAGACCAAGCAAACTTGATGATTCGGATGTGGACACTTCTCTTCACCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_4 LRR_6 LRR_8

Protein Analysis

120

Amino Acids

13.79

Weight (kDa)

9.1

Isoelectric Point (pI)

67.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 308
AciI CCGC 1 cut(s) 171
AfaI GTAC 1 cut(s) 257
AgsI TTSAA 1 cut(s) 206
AluBI AGCT 2 cut(s) 118, 130
AluI AGCT 2 cut(s) 118, 130
Alw21I GWGCWC 1 cut(s) 120
ApeKI GCWGC 1 cut(s) 127
AspLEI GCGC 1 cut(s) 309
AsuHPI GGTGA 1 cut(s) 344
AxyI CCTNAGG 1 cut(s) 122
BanII GRGCYC 1 cut(s) 120
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 1 cut(s) 139
BccI CCATC 1 cut(s) 20
BceAI ACGGC 1 cut(s) 284
BfaI CTAG 1 cut(s) 6
BfmI CTRYAG 1 cut(s) 83
BisI GCNGC 2 cut(s) 128, 171
BlsI GCNGC 2 cut(s) 129, 172
BmrI ACTGGG 1 cut(s) 261
BmuI ACTGGG 1 cut(s) 261
Bse1I ACTGG 1 cut(s) 267
Bse21I CCTNAGG 1 cut(s) 122
BseGI GGATG 1 cut(s) 340
BseMII CTCAG 3 cut(s) 113, 138, 239
BseNI ACTGG 1 cut(s) 267
BseRI GAGGAG 1 cut(s) 122
BseXI GCAGC 1 cut(s) 139
BsiHKAI GWGCWC 1 cut(s) 120
BslFI GGGAC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 43
Bsp1286I GDGCHC 1 cut(s) 120
Bsp143I GATC 1 cut(s) 8
BspACI CCGC 1 cut(s) 171
BspCNI CTCAG 3 cut(s) 114, 139, 238
BspMAI CTGCAG 1 cut(s) 87
BsrI ACTGG 1 cut(s) 267
BssMI GATC 1 cut(s) 8
Bst4CI ACNGT 1 cut(s) 34
Bst6I CTCTTC 1 cut(s) 354
BstC8I GCNNGC 1 cut(s) 284
BstDEI CTNAG 4 cut(s) 122, 147, 196, 225
BstF5I GGATG 1 cut(s) 340
BstHHI GCGC 1 cut(s) 309
BstKTI GATC 1 cut(s) 11
BstMBI GATC 1 cut(s) 8
BstMWI GCNNNNNNNGC 4 cut(s) 124, 143, 283, 315
BstSFI CTRYAG 1 cut(s) 83
BstV1I GCAGC 1 cut(s) 139
Bsu36I CCTNAGG 1 cut(s) 122
BtsCI GGATG 1 cut(s) 340
Cac8I GCNNGC 1 cut(s) 284
CfoI GCGC 1 cut(s) 309
Csp6I GTAC 1 cut(s) 256
CviAII CATG 1 cut(s) 304
CviJI RGCY 9 cut(s) 5, 18, 118, 130, 137, 170, 235, 248, 299
CviKI_1 RGCY 9 cut(s) 5, 18, 118, 130, 137, 170, 235, 248, 299
CviQI GTAC 1 cut(s) 256
DdeI CTNAG 4 cut(s) 122, 147, 196, 225
DpnI GATC 1 cut(s) 10
DpnII GATC 1 cut(s) 8
Eam1104I CTCTTC 1 cut(s) 354
EarI CTCTTC 1 cut(s) 354
Ecl136II GAGCTC 1 cut(s) 118
Eco24I GRGCYC 1 cut(s) 120
Eco53kI GAGCTC 1 cut(s) 118
Eco81I CCTNAGG 1 cut(s) 122
EcoICRI GAGCTC 1 cut(s) 118
EcoT38I GRGCYC 1 cut(s) 120
FaeI CATG 1 cut(s) 307
FaiI YATR 2 cut(s) 134, 305
FaqI GGGAC 1 cut(s) 43
FatI CATG 1 cut(s) 303
Fnu4HI GCNGC 2 cut(s) 128, 171
FokI GGATG 1 cut(s) 347
FriOI GRGCYC 1 cut(s) 120
Fsp4HI GCNGC 2 cut(s) 128, 171
FspBI CTAG 1 cut(s) 6
FspI TGCGCA 1 cut(s) 308
GlaI GCGC 1 cut(s) 308
GluI GCNGC 2 cut(s) 128, 171
HhaI GCGC 1 cut(s) 309
Hin1II CATG 1 cut(s) 307
Hin6I GCGC 1 cut(s) 307
HinP1I GCGC 1 cut(s) 307
HinfI GANTC 2 cut(s) 140, 329
HphI GGTGA 1 cut(s) 344
Hpy166II GTNNAC 1 cut(s) 340
Hpy188I TCNGA 2 cut(s) 211, 334
Hpy188III TCNNGA 1 cut(s) 121
Hpy8I GTNNAC 1 cut(s) 340
HpyAV CCTTC 2 cut(s) 88, 184
HpyCH4III ACNGT 1 cut(s) 34
HpyCH4V TGCA 3 cut(s) 64, 85, 277
HpyF10VI GCNNNNNNNGC 4 cut(s) 124, 143, 283, 315
HpyF3I CTNAG 4 cut(s) 122, 147, 196, 225
Hsp92II CATG 1 cut(s) 307
HspAI GCGC 1 cut(s) 307
Kzo9I GATC 1 cut(s) 8
LmnI GCTCC 1 cut(s) 123
LpnPI CCDG 4 cut(s) 50, 134, 204, 280
Lsp1109I GCAGC 1 cut(s) 139
MaeI CTAG 1 cut(s) 6
MaeIII GTNAC 1 cut(s) 269
MalI GATC 1 cut(s) 10
MboI GATC 1 cut(s) 8
MboII GAAGA 2 cut(s) 39, 341
MhlI GDGCHC 1 cut(s) 120
MluCI AATT 1 cut(s) 289
MmeI TCCRAC 1 cut(s) 286
MnlI CCTC 7 cut(s) 63, 96, 100, 117, 144, 259, 269
MseI TTAA 2 cut(s) 21, 36
MwoI GCNNNNNNNGC 4 cut(s) 124, 143, 283, 315
NdeII GATC 1 cut(s) 8
NlaIII CATG 1 cut(s) 307
NsbI TGCGCA 1 cut(s) 308
PfeI GAWTC 2 cut(s) 140, 329
PkrI GCNGC 2 cut(s) 129, 172
Psp124BI GAGCTC 1 cut(s) 120
PstI CTGCAG 1 cut(s) 87
RsaI GTAC 1 cut(s) 257
RsaNI GTAC 1 cut(s) 256
SacI GAGCTC 1 cut(s) 120
SaqAI TTAA 2 cut(s) 21, 36
SatI GCNGC 2 cut(s) 128, 171
Sau3AI GATC 1 cut(s) 8
SduI GDGCHC 1 cut(s) 120
SetI ASST 6 cut(s) 74, 120, 132, 223, 261, 357
SfcI CTRYAG 1 cut(s) 83
Sse9I AATT 1 cut(s) 289
SsiI CCGC 1 cut(s) 171
SspMI CTAG 1 cut(s) 6
SstI GAGCTC 1 cut(s) 120
TaaI ACNGT 1 cut(s) 34
TasI AATT 1 cut(s) 289
TauI GCSGC 1 cut(s) 173
TfiI GAWTC 2 cut(s) 140, 329
Tru1I TTAA 2 cut(s) 21, 36
Tru9I TTAA 2 cut(s) 21, 36
TseI GCWGC 1 cut(s) 127
TspDTI ATGAA 1 cut(s) 32
XspI CTAG 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.