Rh5AG289400

receptor-like protein 12

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Forward (+)
39248499 .. 39249256
758 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG289400.1

Sequence Viewer

Length: 360 bp
ATGGCTAGATCACAGAGCCTTAATGATGGGACTGTTAAAGTTCATTCTTCCATTTCCTTGTTGCAGGAGAGGTTTAGGCAACTGCAGAGAGCGAAGGAGATGAGGGAGGAGAGAGAGCTCGTGAGGCAGCTCATAGCCGAATCTGCTGAGAGGGGTAATCAAACTCAAGCCGCCCCACATTTTGAGCAGAAGGGCTTGGTGTTTCAATCTGAAATGACAGGTTCTCAGCGTAAGCCACAACCCCAAGCCTCAATGTACCTCCAACCCAGTTACTTGCAGAGCAAGCAAAATTATCAAGCCGTCATGCGCAGACCAAGCAAACTTGATGATTCGGATGTGGACACATCTCTTCACCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

119

Amino Acids

13.72

Weight (kDa)

9.45

Isoelectric Point (pI)

65.3

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 308
AciI CCGC 1 cut(s) 171
AfaI GTAC 1 cut(s) 257
AgsI TTSAA 1 cut(s) 206
AluBI AGCT 2 cut(s) 118, 130
AluI AGCT 2 cut(s) 118, 130
Alw21I GWGCWC 1 cut(s) 120
ApeKI GCWGC 1 cut(s) 127
AspLEI GCGC 1 cut(s) 309
AsuHPI GGTGA 1 cut(s) 344
BanII GRGCYC 1 cut(s) 120
BauI CACGAG 1 cut(s) 119
Bbv12I GWGCWC 1 cut(s) 120
BbvI GCAGC 1 cut(s) 139
BccI CCATC 1 cut(s) 20
BceAI ACGGC 1 cut(s) 284
BfaI CTAG 1 cut(s) 6
BfmI CTRYAG 1 cut(s) 83
BisI GCNGC 2 cut(s) 128, 171
BlsI GCNGC 2 cut(s) 129, 172
BmrI ACTGGG 1 cut(s) 261
BmuI ACTGGG 1 cut(s) 261
BpuEI CTTGAG 1 cut(s) 150
Bse1I ACTGG 1 cut(s) 267
BseGI GGATG 1 cut(s) 340
BseMII CTCAG 2 cut(s) 138, 239
BseNI ACTGG 1 cut(s) 267
BseRI GAGGAG 1 cut(s) 122
BseXI GCAGC 1 cut(s) 139
BsiHKAI GWGCWC 1 cut(s) 120
BslFI GGGAC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 43
Bsp1286I GDGCHC 1 cut(s) 120
Bsp143I GATC 1 cut(s) 8
BspACI CCGC 1 cut(s) 171
BspCNI CTCAG 2 cut(s) 139, 238
BspMAI CTGCAG 1 cut(s) 87
BsrI ACTGG 1 cut(s) 267
BssMI GATC 1 cut(s) 8
BssSI CACGAG 1 cut(s) 119
Bst2BI CACGAG 1 cut(s) 119
Bst4CI ACNGT 1 cut(s) 34
Bst6I CTCTTC 1 cut(s) 354
BstC8I GCNNGC 1 cut(s) 284
BstDEI CTNAG 2 cut(s) 147, 225
BstF5I GGATG 1 cut(s) 340
BstHHI GCGC 1 cut(s) 309
BstKTI GATC 1 cut(s) 11
BstMBI GATC 1 cut(s) 8
BstMWI GCNNNNNNNGC 4 cut(s) 124, 143, 283, 315
BstSFI CTRYAG 1 cut(s) 83
BstV1I GCAGC 1 cut(s) 139
BtsCI GGATG 1 cut(s) 340
Cac8I GCNNGC 1 cut(s) 284
CfoI GCGC 1 cut(s) 309
Csp6I GTAC 1 cut(s) 256
CviAII CATG 1 cut(s) 304
CviQI GTAC 1 cut(s) 256
DdeI CTNAG 2 cut(s) 147, 225
DpnI GATC 1 cut(s) 10
DpnII GATC 1 cut(s) 8
Eam1104I CTCTTC 1 cut(s) 354
EarI CTCTTC 1 cut(s) 354
Ecl136II GAGCTC 1 cut(s) 118
Eco24I GRGCYC 1 cut(s) 120
Eco53kI GAGCTC 1 cut(s) 118
EcoICRI GAGCTC 1 cut(s) 118
EcoT38I GRGCYC 1 cut(s) 120
FaeI CATG 1 cut(s) 307
FaiI YATR 2 cut(s) 134, 305
FaqI GGGAC 1 cut(s) 43
FatI CATG 1 cut(s) 303
Fnu4HI GCNGC 2 cut(s) 128, 171
FokI GGATG 1 cut(s) 347
FriOI GRGCYC 1 cut(s) 120
Fsp4HI GCNGC 2 cut(s) 128, 171
FspBI CTAG 1 cut(s) 6
FspI TGCGCA 1 cut(s) 308
GlaI GCGC 1 cut(s) 308
GluI GCNGC 2 cut(s) 128, 171
HhaI GCGC 1 cut(s) 309
Hin1II CATG 1 cut(s) 307
Hin6I GCGC 1 cut(s) 307
HinP1I GCGC 1 cut(s) 307
HinfI GANTC 2 cut(s) 140, 329
HphI GGTGA 1 cut(s) 344
Hpy166II GTNNAC 1 cut(s) 340
Hpy188I TCNGA 2 cut(s) 211, 334
Hpy188III TCNNGA 1 cut(s) 121
Hpy8I GTNNAC 1 cut(s) 340
HpyAV CCTTC 2 cut(s) 88, 184
HpyCH4III ACNGT 1 cut(s) 34
HpyCH4V TGCA 3 cut(s) 64, 85, 277
HpyF10VI GCNNNNNNNGC 4 cut(s) 124, 143, 283, 315
HpyF3I CTNAG 2 cut(s) 147, 225
Hsp92II CATG 1 cut(s) 307
HspAI GCGC 1 cut(s) 307
Kzo9I GATC 1 cut(s) 8
LpnPI CCDG 3 cut(s) 50, 204, 280
Lsp1109I GCAGC 1 cut(s) 139
MaeI CTAG 1 cut(s) 6
MaeIII GTNAC 1 cut(s) 269
MalI GATC 1 cut(s) 10
MboI GATC 1 cut(s) 8
MboII GAAGA 2 cut(s) 39, 341
MhlI GDGCHC 1 cut(s) 120
MluCI AATT 1 cut(s) 289
MmeI TCCRAC 1 cut(s) 286
MnlI CCTC 7 cut(s) 63, 96, 100, 117, 144, 259, 269
MseI TTAA 2 cut(s) 21, 36
MwoI GCNNNNNNNGC 4 cut(s) 124, 143, 283, 315
NdeII GATC 1 cut(s) 8
NlaIII CATG 1 cut(s) 307
NsbI TGCGCA 1 cut(s) 308
PfeI GAWTC 2 cut(s) 140, 329
PkrI GCNGC 2 cut(s) 129, 172
Psp124BI GAGCTC 1 cut(s) 120
PstI CTGCAG 1 cut(s) 87
RsaI GTAC 1 cut(s) 257
RsaNI GTAC 1 cut(s) 256
SacI GAGCTC 1 cut(s) 120
SaqAI TTAA 2 cut(s) 21, 36
SatI GCNGC 2 cut(s) 128, 171
Sau3AI GATC 1 cut(s) 8
SduI GDGCHC 1 cut(s) 120
SetI ASST 6 cut(s) 74, 120, 132, 223, 261, 357
SfcI CTRYAG 1 cut(s) 83
SmlI CTYRAG 1 cut(s) 165
SmoI CTYRAG 1 cut(s) 165
Sse9I AATT 1 cut(s) 289
SsiI CCGC 1 cut(s) 171
SspMI CTAG 1 cut(s) 6
SstI GAGCTC 1 cut(s) 120
TaaI ACNGT 1 cut(s) 34
TasI AATT 1 cut(s) 289
TauI GCSGC 1 cut(s) 173
TfiI GAWTC 2 cut(s) 140, 329
Tru1I TTAA 2 cut(s) 21, 36
Tru9I TTAA 2 cut(s) 21, 36
TseI GCWGC 1 cut(s) 127
TspDTI ATGAA 1 cut(s) 32
XspI CTAG 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.