Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0010076

Physical Location & Seq

Genomic Coordinates Reverse (-)

55903566 .. 55908107

Gene Structure 4542 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034849

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGGCGTCGCTCGCTCTCACCACCGCCCCTCTCCCCTCTCTCAGATCCCGAACCGCCTTCCCGAAATCGCTACTACTCAAACCGAGTCCCAGACTCCGAGCCCAAACCCGACCCGGTCCCCTTAGAACCACCGCTCTCGGCTTCAACAAAACCCTAAGCCCTCTCATTGCCTTCCCCAAACTCGCCGAGTCCTCCCCCGAGTTCGCTCCCCTCCGAAGCCGCGGCTTGACCGTCAAGGCCGCCGCCGCAGCCGGCGGCGGTGGTTCCATTATTCCGGCGAAGAAGCCATGGCAAGGCGCGGCGATGAAGCCTCTGATCGCGTCCATCGCGACAGGAGTGATCCTCTGGTTCGTGCCGACTCCTGCCGGCGTCACCAAAAACGCGTGGCAGCTTCTGGCGATTTTCCTCGCCACCATCGTCGGAATCATCACTCAGCCTCTGCCTCTCGGCGCCGTCGCTCTTTTAGGACTCGGAGCAGCGGTGCTCACGAAGACGCTGACCTTCGCCGCGGCCTTCTCCGCGTTCGGCGATCCGATTCCGTGGCTCATCGCCCTCGCCTTCTTCTTCGCCCGAGGGTTCATCAAGACCGGCCTCGGGAATCGAATTGCGTACCAGTTCGTGTCCTTGTTCGGTAGCTCGTCGTTGGGGTTAGGGTACAGTTTGGTTTTCAGCGAGGCCTTGTTGGCGCCGGCGATTCCCTCCGTCTCTGCTCGTGCCGGAGGCATTTTCTTGCCGTTGGTGAAGTCACTTTGCGTCGCCTGCGGTAGCAATGTCGGCGACGGGACCGAAGGTAAATTGGGATCGTGGTTGATGCTCACGTGCTTTCAGACGTCGGTGATTTCGTCGGCCATGTTCTTAACAGCCATGGCTGCTAATCCGTTGAGCGCGAATTTAACCTTCAACACGATTAAGAAGACGATTGGGTGGACCGATTGGGCTAAGGCGGCGATTGTGCCCGGTTTGGTTTCACTGATTGTGGTGCCTTTGTTGCTGTACGTGATTTACCCGCCGTCGGTGAAGAGCAGCCCTGACGCGCCCAAACTTGCAAGGGAGAAGCTGGAGAATATGGGTCCCATGTCCAAGAACGAGGTTATAATGACTGGCACTCTGTTTCTTACGGTAGGGCTGTGGATATTTGGAGGAATGTTAGGTGTGGATGCAGTTACTGCTGCCATTCTTGGATTATCAGTTCTCCTTGTGACTGGTGTTGTTACCTGGAAGGAGTGCTTAGCTGAGTCAGTTGCCTGGGACACCCTTACATGGTTTGCCGCACTCATTGCAATGGCTGGGTATCTCAACAAATATGGTCTTATCTCCTGGTTTAGCCAAACTGTAGTAAAGTTTGTTGGCGGATTAGGTCTTGGGTGGCAGCCAGCTTTTGGCATTCTTGTTCTTCTCTATTTCTACTCTCACTACTTCTTTGCCAGTGGAGCTGCTCATATTGGGGCGATGTTTACAGCATTCTTGAGTGTGGCTAGTGCTCTTGGTACTCCACCATTCTTTGGTGCCATGGTCCTTGCATTCCTCTCCAATCTCATGGGTGGCCTGACCCATTATGGGATTGGGTCAGCTCCCGTCTTCTATGGCGCTGGCTATGTTCCGCTTGCCCAGTGGTGGGGCTATGGATTCCTTATGTCCGTTGTCAATATTATCATTTGGCTCGGAGTAGGAGGGGTTTGGTGGAAGTTCATTGGCTTGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006536 GO:0006541 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009064 GO:0009507 GO:0009526 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009624 GO:0009941 GO:0009987 GO:0015075 GO:0015131 GO:0015139 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015729 GO:0015740 GO:0015742 GO:0015743 GO:0015849 GO:0016020 GO:0019676 GO:0019740 GO:0019752 GO:0022857 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051181 GO:0051184 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071423 GO:0071702 GO:0071704 GO:0098656 GO:1901564 GO:1901605 GO:1902356 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

568

Amino Acids

59.72

Weight (kDa)

9.9

Isoelectric Point (pI)

33.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	104 - 567	2.5e-145	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	140 - 466	5e-19	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12860 AT5G12860
fragaria_vesca	FvH4_3g28880
malus_domestica	MD03G1175800.v1.1 MD11G1193500.v1.1
prunus_persica	Prupe.4G248000_v2.0.a1
pyrus_communis	pycom03g13320 pycom11g16910
rosa_chinensis	RchiOBHm_Chr5g0051981
rosa_laevigata	RLG00000034849
rosa_multiflora	Rmu_co8424073.1_g000002 Rmu_ssc0000466.1_g000003
rosa_roxburghii	Rroxscaffold_1G00027750
rosa_rugosa	Rorug05G0275700 Rorug05G0275800
rosa_samantha	Rh5AG347500 Rh5BG358500 Rh5CG383900 Rh5DG374000 Rh7CG246800
rosa_wichuraiana	Rw5G032850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1094
AatII	GACGTC	1 cut(s)	833
AccB1I	GGYRCC	4 cut(s)	449, 685, 979, 1505
AccB7I	CCANNNNNTGG	2 cut(s)	1379, 1502
AccBSI	CCGCTC	1 cut(s)	134
AccII	CGCG	9 cut(s)	222, 299, 320, 329, 383, 509, 521, 887, 1034
AclWI	GGATC	4 cut(s)	39, 334, 524, 808
AcoI	YGGCCR	1 cut(s)	846
AcsI	RAATTY	1 cut(s)	889
AcvI	CACGTG	1 cut(s)	819
AcyI	GRCGYC	5 cut(s)	5, 369, 450, 686, 830
AfaI	GTAC	4 cut(s)	611, 656, 995, 1489
AfiI	CCNNNNNNNGG	9 cut(s)	293, 594, 1012, 1260, 1379, 1502, 1557, 1614, 1615
AflIII	ACRYGT	1 cut(s)	381
AgsI	TTSAA	2 cut(s)	145, 901
AjnI	CCWGG	3 cut(s)	1214, 1244, 1316
AloI	GAACNNNNNNTCC	2 cut(s)	1173, 1205
AluBI	AGCT	7 cut(s)	391, 636, 1057, 1232, 1376, 1433, 1571
AluI	AGCT	7 cut(s)	391, 636, 1057, 1232, 1376, 1433, 1571
Alw21I	GWGCWC	2 cut(s)	486, 1483
Alw26I	GTCTC	1 cut(s)	709
AlwI	GGATC	4 cut(s)	39, 334, 524, 808
AlwNI	CAGNNNCTG	3 cut(s)	394, 439, 1166
Ama87I	CYCGRG	3 cut(s)	197, 570, 593
AoxI	GGCC	6 cut(s)	237, 510, 589, 675, 846, 1543
ApeKI	GCWGC	8 cut(s)	248, 388, 476, 869, 1023, 1169, 1369, 1433
ApoI	RAATTY	1 cut(s)	889
AspLEI	GCGC	6 cut(s)	299, 452, 688, 887, 1036, 1589
AspS9I	GGNCC	5 cut(s)	116, 783, 927, 1070, 1513
AsuC2I	CCSGG	2 cut(s)	114, 957
AsuHPI	GGTGA	5 cut(s)	10, 364, 751, 847, 1027
AvaI	CYCGRG	3 cut(s)	197, 570, 593
AvaII	GGWCC	5 cut(s)	116, 783, 927, 1070, 1513
BaeGI	GKGCMC	1 cut(s)	957
BanI	GGYRCC	4 cut(s)	449, 685, 979, 1505
BanII	GRGCYC	1 cut(s)	103
BauI	CACGAG	1 cut(s)	711
BbrPI	CACGTG	1 cut(s)	819
BbsI	GAAGAC	3 cut(s)	497, 920, 1570
Bbv12I	GWGCWC	2 cut(s)	486, 1483
BbvI	GCAGC	8 cut(s)	260, 400, 488, 856, 1035, 1156, 1381, 1420
BccI	CCATC	2 cut(s)	332, 422
BceAI	ACGGC	3 cut(s)	437, 718, 994
BciT130I	CCWGG	3 cut(s)	1216, 1246, 1318
BcnI	CCSGG	2 cut(s)	114, 957
BcoDI	GTCTC	1 cut(s)	709
BfaI	CTAG	1 cut(s)	1476
BfmI	CTRYAG	1 cut(s)	1332
BfoI	RGCGCY	3 cut(s)	453, 689, 1590
BglI	GCCNNNNNGGC	1 cut(s)	683
BlpI	GCTNAGC	1 cut(s)	1228
Bme1390I	CCNGG	5 cut(s)	114, 957, 1216, 1246, 1318
Bme18I	GGWCC	5 cut(s)	116, 783, 927, 1070, 1513
BmeT110I	CYCGRG	3 cut(s)	197, 570, 593
BmgT120I	GGNCC	5 cut(s)	116, 783, 927, 1070, 1513
BmiI	GGNNCC	9 cut(s)	118, 265, 451, 687, 784, 981, 1071, 1072, 1507
BmrFI	CCNGG	5 cut(s)	114, 957, 1216, 1246, 1318
BmrI	ACTGGG	1 cut(s)	1603
BmsI	GCATC	2 cut(s)	801, 1147
BmuI	ACTGGG	1 cut(s)	1603
BpiI	GAAGAC	3 cut(s)	497, 920, 1570
BplI	GAGNNNNNCTC	2 cut(s)	327, 359
BpmI	CTGGAG	1 cut(s)	1079
Bpu10I	CCTNAGC	2 cut(s)	155, 939
Bpu1102I	GCTNAGC	1 cut(s)	1228
BpuEI	CTTGAG	1 cut(s)	1486
BpuMI	CCSGG	2 cut(s)	114, 957
BsaAI	YACGTR	2 cut(s)	819, 997
BsaHI	GRCGYC	5 cut(s)	5, 369, 450, 686, 830
BsaJI	CCNNGG	9 cut(s)	220, 287, 507, 539, 571, 592, 864, 1245, 1509
BsaXI	ACNNNNNCTCC	2 cut(s)	465, 495
Bsc4I	CCNNNNNNNGG	9 cut(s)	293, 594, 1012, 1260, 1379, 1502, 1557, 1614, 1615
Bse118I	RCCGGY	4 cut(s)	251, 365, 587, 688
Bse1I	ACTGG	5 cut(s)	613, 1105, 1207, 1425, 1609
Bse3DI	GCAATG	4 cut(s)	165, 775, 1275, 1287
BseBI	CCWGG	3 cut(s)	1216, 1246, 1318
BseDI	CCNNGG	9 cut(s)	220, 287, 507, 539, 571, 592, 864, 1245, 1509
BseGI	GGATG	1 cut(s)	1162
BseLI	CCNNNNNNNGG	9 cut(s)	293, 594, 1012, 1260, 1379, 1502, 1557, 1614, 1615
BseMI	GCAATG	4 cut(s)	165, 775, 1275, 1287
BseMII	CTCAG	3 cut(s)	55, 446, 1224
BseNI	ACTGG	5 cut(s)	613, 1105, 1207, 1425, 1609
BseSI	GKGCMC	1 cut(s)	957
BseXI	GCAGC	8 cut(s)	260, 400, 488, 856, 1035, 1156, 1381, 1420
BseYI	CCCAGC	1 cut(s)	1286
Bsh1236I	CGCG	9 cut(s)	222, 299, 320, 329, 383, 509, 521, 887, 1034
BshFI	GGCC	6 cut(s)	239, 512, 591, 677, 848, 1545
BshNI	GGYRCC	4 cut(s)	449, 685, 979, 1505
BsiHKAI	GWGCWC	2 cut(s)	486, 1483
BsiHKCI	CYCGRG	3 cut(s)	197, 570, 593
BsiSI	CCGG	8 cut(s)	114, 252, 275, 366, 588, 689, 717, 957
BslFI	GGGAC	5 cut(s)	72, 102, 796, 1056, 1262
BslI	CCNNNNNNNGG	9 cut(s)	293, 594, 1012, 1260, 1379, 1502, 1557, 1614, 1615
BsmAI	GTCTC	1 cut(s)	709
BsmBI	CGTCTC	1 cut(s)	709
BsmFI	GGGAC	5 cut(s)	72, 102, 796, 1056, 1262
BsmI	GAATGC	3 cut(s)	1383, 1460, 1520
BsnI	GGCC	6 cut(s)	239, 512, 591, 677, 848, 1545
BsoBI	CYCGRG	3 cut(s)	197, 570, 593
Bsp1286I	GDGCHC	4 cut(s)	103, 486, 957, 1483
Bsp143I	GATC	5 cut(s)	44, 315, 339, 529, 800
Bsp1720I	GCTNAGC	1 cut(s)	1228
Bsp19I	CCATGG	3 cut(s)	287, 864, 1509
Bsp68I	TCGCGA	1 cut(s)	329
BspANI	GGCC	6 cut(s)	239, 512, 591, 677, 848, 1545
BspCNI	CTCAG	3 cut(s)	54, 445, 1225
BspFNI	CGCG	9 cut(s)	222, 299, 320, 329, 383, 509, 521, 887, 1034
BspLI	GGNNCC	9 cut(s)	118, 265, 451, 687, 784, 981, 1071, 1072, 1507
BspPI	GGATC	4 cut(s)	39, 334, 524, 808
BspQI	GCTCTTC	1 cut(s)	1013
BspT107I	GGYRCC	4 cut(s)	449, 685, 979, 1505
BsrBI	CCGCTC	1 cut(s)	134
BsrDI	GCAATG	4 cut(s)	165, 775, 1275, 1287
BsrFI	RCCGGY	4 cut(s)	251, 365, 587, 688
BsrI	ACTGG	5 cut(s)	613, 1105, 1207, 1425, 1609
BssAI	RCCGGY	4 cut(s)	251, 365, 587, 688
BssECI	CCNNGG	9 cut(s)	220, 287, 507, 539, 571, 592, 864, 1245, 1509
BssMI	GATC	5 cut(s)	44, 315, 339, 529, 800
BssNI	GRCGYC	5 cut(s)	5, 369, 450, 686, 830
BssSI	CACGAG	1 cut(s)	711
BssT1I	CCWWGG	3 cut(s)	287, 864, 1509
Bst2BI	CACGAG	1 cut(s)	711
Bst2UI	CCWGG	3 cut(s)	1216, 1246, 1318
Bst4CI	ACNGT	4 cut(s)	232, 659, 1120, 1333
Bst6I	CTCTTC	1 cut(s)	1013
BstACI	GRCGYC	5 cut(s)	5, 369, 450, 686, 830
BstAPI	GCANNNNNTGC	2 cut(s)	1166, 1277
BstBAI	YACGTR	2 cut(s)	819, 997
BstC8I	GCNNGC	8 cut(s)	12, 253, 367, 690, 760, 1374, 1591, 1605
BstDEI	CTNAG	7 cut(s)	41, 122, 155, 432, 939, 1228, 1233
BstDSI	CCRYGG	6 cut(s)	220, 287, 507, 539, 864, 1509
BstF5I	GGATG	1 cut(s)	1162
BstFNI	CGCG	9 cut(s)	222, 299, 320, 329, 383, 509, 521, 887, 1034
BstH2I	RGCGCY	3 cut(s)	453, 689, 1590
BstHHI	GCGC	6 cut(s)	299, 452, 688, 887, 1036, 1589
BstKTI	GATC	5 cut(s)	47, 318, 342, 532, 803
BstMAI	GTCTC	1 cut(s)	709
BstMBI	GATC	5 cut(s)	44, 315, 339, 529, 800
BstNI	CCWGG	3 cut(s)	1216, 1246, 1318
BstSCI	CCNGG	5 cut(s)	112, 955, 1214, 1244, 1316
BstSFI	CTRYAG	1 cut(s)	1332
BstSLI	GKGCMC	1 cut(s)	957
BstUI	CGCG	9 cut(s)	222, 299, 320, 329, 383, 509, 521, 887, 1034
BstV1I	GCAGC	8 cut(s)	260, 400, 488, 856, 1035, 1156, 1381, 1420
BstV2I	GAAGAC	3 cut(s)	497, 920, 1570
BstX2I	RGATCY	1 cut(s)	44
BstXI	CCANNNNNNTGG	1 cut(s)	1537
BstYI	RGATCY	1 cut(s)	44
BsuRI	GGCC	6 cut(s)	239, 512, 591, 677, 848, 1545
BtgI	CCRYGG	6 cut(s)	220, 287, 507, 539, 864, 1509
BtgZI	GCGATG	4 cut(s)	310, 317, 532, 1463
BtsCI	GGATG	1 cut(s)	1162
BtsIMutI	CAGTG	3 cut(s)	968, 1432, 1616
BtuMI	TCGCGA	1 cut(s)	329
Cac8I	GCNNGC	8 cut(s)	12, 253, 367, 690, 760, 1374, 1591, 1605
CaiI	CAGNNNCTG	3 cut(s)	394, 439, 1166
CfoI	GCGC	6 cut(s)	299, 452, 688, 887, 1036, 1589
Cfr10I	RCCGGY	4 cut(s)	251, 365, 587, 688
Cfr13I	GGNCC	5 cut(s)	116, 783, 927, 1070, 1513
Cfr42I	CCGCGG	2 cut(s)	223, 510
CseI	GACGC	5 cut(s)	309, 358, 502, 742, 1040
Csp6I	GTAC	4 cut(s)	610, 655, 994, 1488
CviAII	CATG	7 cut(s)	288, 850, 865, 1075, 1260, 1510, 1537
CviQI	GTAC	4 cut(s)	610, 655, 994, 1488
DdeI	CTNAG	7 cut(s)	41, 122, 155, 432, 939, 1228, 1233
DinI	GGCGCC	2 cut(s)	451, 687
DpnI	GATC	5 cut(s)	46, 317, 341, 531, 802
DpnII	GATC	5 cut(s)	44, 315, 339, 529, 800
EaeI	YGGCCR	1 cut(s)	846
Eam1104I	CTCTTC	1 cut(s)	1013
EarI	CTCTTC	1 cut(s)	1013
EciI	GGCGGA	1 cut(s)	1365
Eco130I	CCWWGG	3 cut(s)	287, 864, 1509
Eco147I	AGGCCT	1 cut(s)	677
Eco24I	GRGCYC	1 cut(s)	103
Eco47I	GGWCC	5 cut(s)	116, 783, 927, 1070, 1513
Eco72I	CACGTG	1 cut(s)	819
Eco88I	CYCGRG	3 cut(s)	197, 570, 593
EcoO109I	RGGNCCY	1 cut(s)	1070
EcoRII	CCWGG	3 cut(s)	1214, 1244, 1316
EcoT14I	CCWWGG	3 cut(s)	287, 864, 1509
EcoT38I	GRGCYC	1 cut(s)	103
EgeI	GGCGCC	2 cut(s)	451, 687
EheI	GGCGCC	2 cut(s)	451, 687
ErhI	CCWWGG	3 cut(s)	287, 864, 1509
Esp3I	CGTCTC	1 cut(s)	709
FaeI	CATG	7 cut(s)	291, 853, 868, 1078, 1263, 1513, 1540
FalI	AAGNNNNNCTT	2 cut(s)	1211, 1243
FaqI	GGGAC	5 cut(s)	72, 102, 796, 1056, 1262
FatI	CATG	7 cut(s)	287, 849, 864, 1074, 1259, 1509, 1536
FauI	CCCGC	1 cut(s)	1014
FokI	GGATG	1 cut(s)	1169
FriOI	GRGCYC	1 cut(s)	103
FspBI	CTAG	1 cut(s)	1476
GlaI	GCGC	6 cut(s)	298, 451, 687, 886, 1035, 1588
GsaI	CCCAGC	1 cut(s)	1290
GsuI	CTGGAG	1 cut(s)	1079
HaeII	RGCGCY	3 cut(s)	453, 689, 1590
HaeIII	GGCC	6 cut(s)	239, 512, 591, 677, 848, 1545
HapII	CCGG	8 cut(s)	114, 252, 275, 366, 588, 689, 717, 957
HgaI	GACGC	5 cut(s)	309, 358, 502, 742, 1040
HhaI	GCGC	6 cut(s)	299, 452, 688, 887, 1036, 1589
Hin1I	GRCGYC	5 cut(s)	5, 369, 450, 686, 830
Hin1II	CATG	7 cut(s)	291, 853, 868, 1078, 1263, 1513, 1540
Hin6I	GCGC	6 cut(s)	297, 450, 686, 885, 1034, 1587
HinP1I	GCGC	6 cut(s)	297, 450, 686, 885, 1034, 1587
HpaII	CCGG	8 cut(s)	114, 252, 275, 366, 588, 689, 717, 957
HphI	GGTGA	5 cut(s)	10, 364, 751, 847, 1027
Hpy166II	GTNNAC	2 cut(s)	927, 1455
Hpy188I	TCNGA	9 cut(s)	44, 98, 215, 315, 422, 473, 534, 828, 1664
Hpy188III	TCNNGA	7 cut(s)	48, 61, 328, 487, 583, 595, 1465
Hpy8I	GTNNAC	2 cut(s)	927, 1455
Hpy99I	CGWCG	9 cut(s)	10, 422, 458, 643, 758, 782, 835, 847, 1015
HpyAV	CCTTC	8 cut(s)	67, 181, 511, 523, 568, 782, 907, 1213
HpyCH4III	ACNGT	4 cut(s)	232, 659, 1120, 1333
HpyCH4IV	ACGT	3 cut(s)	818, 830, 996
HpyCH4V	TGCA	4 cut(s)	1046, 1160, 1280, 1520
HpyF3I	CTNAG	7 cut(s)	41, 122, 155, 432, 939, 1228, 1233
HpySE526I	ACGT	3 cut(s)	818, 830, 996
Hsp92I	GRCGYC	5 cut(s)	5, 369, 450, 686, 830
Hsp92II	CATG	7 cut(s)	291, 853, 868, 1078, 1263, 1513, 1540
HspAI	GCGC	6 cut(s)	297, 450, 686, 885, 1034, 1587
KasI	GGCGCC	2 cut(s)	449, 685
KflI	GGGWCCC	1 cut(s)	1070
KroI	GCCGGC	3 cut(s)	251, 365, 688
KroNI	GCCGGC	3 cut(s)	253, 367, 690
KspI	CCGCGG	2 cut(s)	223, 510
Kzo9I	GATC	5 cut(s)	44, 315, 339, 529, 800
LguI	GCTCTTC	1 cut(s)	1013
LmnI	GCTCC	4 cut(s)	211, 473, 1430, 1576
Lsp1109I	GCAGC	8 cut(s)	260, 400, 488, 856, 1035, 1156, 1381, 1420
LweI	GCATC	2 cut(s)	801, 1147
MaeI	CTAG	1 cut(s)	1476
MaeII	ACGT	3 cut(s)	818, 830, 996
MaeIII	GTNAC	5 cut(s)	370, 744, 1162, 1198, 1210
MalI	GATC	5 cut(s)	46, 317, 341, 531, 802
MbiI	CCGCTC	1 cut(s)	134
MboI	GATC	5 cut(s)	44, 315, 339, 529, 800
MboII	GAAGA	8 cut(s)	292, 502, 553, 556, 925, 1030, 1385, 1570
MflI	RGATCY	1 cut(s)	44
MhlI	GDGCHC	4 cut(s)	103, 486, 957, 1483
MluCI	AATT	3 cut(s)	603, 794, 889
MluI	ACGCGT	1 cut(s)	381
Mly113I	GGCGCC	2 cut(s)	450, 686
MlyI	GAGTC	6 cut(s)	87, 94, 197, 352, 462, 1244
MmeI	TCCRAC	1 cut(s)	400
MreI	CGCCGGCG	1 cut(s)	688
MroNI	GCCGGC	3 cut(s)	251, 365, 688
MseI	TTAA	3 cut(s)	857, 893, 909
MslI	CAYNNNNRTG	1 cut(s)	1280
MspA1I	CMGCKG	3 cut(s)	222, 479, 509
MspI	CCGG	8 cut(s)	114, 252, 275, 366, 588, 689, 717, 957
MspR9I	CCNGG	5 cut(s)	114, 957, 1216, 1246, 1318
Mva1269I	GAATGC	3 cut(s)	1383, 1460, 1520
MvaI	CCWGG	3 cut(s)	1216, 1246, 1318
MvnI	CGCG	9 cut(s)	222, 299, 320, 329, 383, 509, 521, 887, 1034
NaeI	GCCGGC	3 cut(s)	253, 367, 690
NarI	GGCGCC	2 cut(s)	450, 686
NciI	CCSGG	2 cut(s)	114, 957
NcoI	CCATGG	3 cut(s)	287, 864, 1509
NdeII	GATC	5 cut(s)	44, 315, 339, 529, 800
NgoMIV	GCCGGC	3 cut(s)	251, 365, 688
NlaIII	CATG	7 cut(s)	291, 853, 868, 1078, 1263, 1513, 1540
NlaIV	GGNNCC	9 cut(s)	118, 265, 451, 687, 784, 981, 1071, 1072, 1507
NmeAIII	GCCGAG	3 cut(s)	117, 211, 426
NmuCI	GTSAC	3 cut(s)	370, 744, 1198
NruI	TCGCGA	1 cut(s)	329
PceI	AGGCCT	1 cut(s)	677
PciSI	GCTCTTC	1 cut(s)	1013
PcsI	WCGNNNNNNNCGW	2 cut(s)	414, 839
PctI	GAATGC	3 cut(s)	1383, 1460, 1520
PdiI	GCCGGC	3 cut(s)	253, 367, 690
PfeI	GAWTC	5 cut(s)	423, 535, 598, 694, 1626
PflFI	GACNNNGTC	1 cut(s)	114
PflMI	CCANNNNNTGG	2 cut(s)	1379, 1502
PleI	GAGTC	6 cut(s)	87, 93, 196, 352, 462, 1243
PluTI	GGCGCC	2 cut(s)	453, 689
PmaCI	CACGTG	1 cut(s)	819
PmlI	CACGTG	1 cut(s)	819
PpsI	GAGTC	6 cut(s)	87, 93, 196, 352, 462, 1243
Ppu21I	YACGTR	2 cut(s)	819, 997
PpuMI	RGGWCCY	1 cut(s)	1070
PsiI	TTATAA	1 cut(s)	1094
Psp5II	RGGWCCY	1 cut(s)	1070
Psp6I	CCWGG	3 cut(s)	1214, 1244, 1316
PspCI	CACGTG	1 cut(s)	819
PspFI	CCCAGC	1 cut(s)	1286
PspGI	CCWGG	3 cut(s)	1214, 1244, 1316
PspN4I	GGNNCC	9 cut(s)	118, 265, 451, 687, 784, 981, 1071, 1072, 1507
PspPI	GGNCC	5 cut(s)	116, 783, 927, 1070, 1513
PspPPI	RGGWCCY	1 cut(s)	1070
PstNI	CAGNNNCTG	3 cut(s)	394, 439, 1166
PsuI	RGATCY	1 cut(s)	44
PsyI	GACNNNGTC	1 cut(s)	114
RruI	TCGCGA	1 cut(s)	329
RsaI	GTAC	4 cut(s)	611, 656, 995, 1489
RsaNI	GTAC	4 cut(s)	610, 655, 994, 1488
RseI	CAYNNNNRTG	1 cut(s)	1280
SacII	CCGCGG	2 cut(s)	223, 510
SapI	GCTCTTC	1 cut(s)	1013
SaqAI	TTAA	3 cut(s)	857, 893, 909
Sau3AI	GATC	5 cut(s)	44, 315, 339, 529, 800
Sau96I	GGNCC	5 cut(s)	116, 783, 927, 1070, 1513
SchI	GAGTC	6 cut(s)	87, 94, 197, 352, 462, 1244
ScrFI	CCNGG	5 cut(s)	114, 957, 1216, 1246, 1318
SduI	GDGCHC	4 cut(s)	103, 486, 957, 1483
SfaNI	GCATC	2 cut(s)	801, 1147
SfcI	CTRYAG	1 cut(s)	1332
SfoI	GGCGCC	2 cut(s)	451, 687
Sfr303I	CCGCGG	2 cut(s)	223, 510
SgrAI	CRCCGGYG	1 cut(s)	688
SgrBI	CCGCGG	2 cut(s)	223, 510
SinI	GGWCC	5 cut(s)	116, 783, 927, 1070, 1513
SmiMI	CAYNNNNRTG	1 cut(s)	1280
SmlI	CTYRAG	1 cut(s)	1465
SmoI	CTYRAG	1 cut(s)	1465
Sse9I	AATT	3 cut(s)	603, 794, 889
SseBI	AGGCCT	1 cut(s)	677
SspDI	GGCGCC	2 cut(s)	449, 685
SspI	AATATT	1 cut(s)	1648
SspMI	CTAG	1 cut(s)	1476
StuI	AGGCCT	1 cut(s)	677
StyD4I	CCNGG	5 cut(s)	112, 955, 1214, 1244, 1316
StyI	CCWWGG	3 cut(s)	287, 864, 1509
TaaI	ACNGT	4 cut(s)	232, 659, 1120, 1333
TaiI	ACGT	3 cut(s)	821, 833, 999
TaqI	TCGA	1 cut(s)	601
TaqII	GACCGA	2 cut(s)	800, 944
TasI	AATT	3 cut(s)	603, 794, 889
TfiI	GAWTC	5 cut(s)	423, 535, 598, 694, 1626
Tru1I	TTAA	3 cut(s)	857, 893, 909
Tru9I	TTAA	3 cut(s)	857, 893, 909
TscAI	CASTG	3 cut(s)	975, 1432, 1616
TseFI	GTSAC	3 cut(s)	370, 744, 1198
TseI	GCWGC	8 cut(s)	248, 388, 476, 869, 1023, 1169, 1369, 1433
Tsp45I	GTSAC	3 cut(s)	370, 744, 1198
TspDTI	ATGAA	3 cut(s)	320, 568, 1678
TspGWI	ACGGA	4 cut(s)	528, 691, 867, 1627
TspRI	CASTG	3 cut(s)	975, 1432, 1616
Tth111I	GACNNNGTC	1 cut(s)	114
Van91I	CCANNNNNTGG	2 cut(s)	1379, 1502
VpaK11BI	GGWCC	5 cut(s)	116, 783, 927, 1070, 1513
XapI	RAATTY	1 cut(s)	889
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1559
XspI	CTAG	1 cut(s)	1476
ZraI	GACGTC	1 cut(s)	831

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.