Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0010076

Physical Location & Seq

Genomic Coordinates Reverse (-)

50473206 .. 50478464

Gene Structure 5259 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG383900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGGCGTCGCTCGCTCTCACCACCGCCCCTCTCCCCTCTCTCAGATCCCGAACCGCCTTCCCGAAATCGCTACTACTCAAACCCAGTCCCAGACTCCGAGCCCAAACCCGACCCGGTCCTCTTAGAACCGCCGCTCTCGGCTTCAACAAAACCCTAAGCCCTCTCATTGCCTTCCCCAAACTCGCCGAGTCCTCCCGCGAGTTCGCTCCCCTCCGAAGCCGCGGCTTGACCGTCAAGGCCGCCGCCGCCGCCGGCGGTGGTTCCATTATTCCGGCGAAGCAGCCATGGCAAGGCGCGGCGATGAAGCCTCTGATCGCGTCCATCGCGACGGGAGTGATCCTCTGGTTCGTGCCGACTCCCGCCGGCGTCACCAAACACGCGTGGCAGCTTCTGGCGATTTTCCTCGCCACCATCGTCGGAATCATCACTCAGCCTCTGCCTCTCGGCGCCGTCGCTCTTTTAGGACTCGGAGCAGCGGTGCTCACGAAGACGCTGACCTTCGCCGCGGCCTTCTCCGCCTTCGGCGATCCGATTCCGTGGCTCATCGCCCTCGCCTTCTTCTTCGCCCGAGGGTTCATCAAGACCGGCCTCGGGAATCGAATTGCGTACCAGTTCGTGTCCTTGTTCGGTAGCTCGTCGTTGGGGTTAGGGTACAGTTTGGTTTTCAGCGAGGCCTTGTTGGCGCCGGCGATTCCCTCCGTCTCTGCTCGTGCCGGAGGCATTTTCTTGCCGCTGGTGAAGTCCCTCTGCGTCGCCTGCGGTAGCAATGTCGGCGACGGGACCGAAGGTAAATTGGGATCGTGGTTGATGCTCACGTGCTTTCAGACGTCGGTGATTTCGTCGGCCATGTTCTTAACTGCCATGGCGGCCAATCCGTTGAGCGCGAATTTAACCTTCAACACGATTAAGCAGACGATTGGGTGGACCGATTGGGCTAAGGCGGCGATTGTGCCCGGTTTGGTTTCACTGATTGTGGTGCCTTTGTTGCTGTACCTGATTTACCCGCCGTCGGTGAAGAGCAGCCCTGACGCGCCCAAACTTGCAAGGGAGAAGCTGGAGAATATGGGTTCCATGAGCAAGAACGAGATTATAATGGCTGGCACTCTGTTTCTTACGGTAGGGCTGTGGATATTTGGAGGAATGTTAGGTGTGGATGCAGTTACAGCTGCCATTCTTGGATTATCAGTTCTCCTTGTGACTGGTGTTGTTACCTGGAAGGAGTGCTTAGCTGAGTCAGTTGCCTGGGACACCCTTACATGGTTTGCTGCACTCATTGCAATGGCTGGGTATCTCAACAAATATGGTCTTATCTCCTGGTTTAGCCAAACTGTAGTAAAGTTTGTTGGCGGATTAGGTCTTGGGTGGCAGCCAGCTTTTGGCATTCTTGTTCTACTCTATTTCTACTCTCACTACTTCTTTGCCAGTGGAGCTGCTCATATTGGGGCGATGTTTACAGCATTCTTGAGTGTGGCTAGTGCTCTTGGTACTCCACCATTCTTTGGTGCCATGGTCCTTGCATTCCTCTCCAACCTCATGGGTGGCCTGACCCATTACGGGATTGGGTCAGCTCCTGTCTTCTATGGCGCTGGCTATGTTCCGCTTGCCCAGTGGTGGGGCTATGGATTCCTTATTTCCGTCGTCAATATTATCATTTGGCTCGGAGTTGGAGGGGTTTGGTGGAAGTTCATTGGCTTGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005310 GO:0005342 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006520 GO:0006536 GO:0006541 GO:0006807 GO:0006810 GO:0006811 GO:0006820 GO:0006835 GO:0008150 GO:0008152 GO:0008509 GO:0008514 GO:0009064 GO:0009507 GO:0009526 GO:0009534 GO:0009536 GO:0009579 GO:0009605 GO:0009607 GO:0009624 GO:0009941 GO:0009987 GO:0015075 GO:0015131 GO:0015139 GO:0015140 GO:0015318 GO:0015556 GO:0015711 GO:0015729 GO:0015740 GO:0015742 GO:0015743 GO:0015849 GO:0016020 GO:0019676 GO:0019740 GO:0019752 GO:0022857 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0034220 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046942 GO:0046943 GO:0050896 GO:0051179 GO:0051181 GO:0051184 GO:0051234 GO:0051704 GO:0051707 GO:0055085 GO:0071423 GO:0071702 GO:0071704 GO:0098656 GO:1901564 GO:1901605 GO:1902356 GO:1903825 GO:1905039

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_sulph_symp

Protein Analysis

566

Amino Acids

59.69

Weight (kDa)

9.89

Isoelectric Point (pI)

34.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_sulph_symp	PF00939	103 - 566	2.9e-144	Sodium:sulfate symporter transmembrane region
CitMHS	PF03600	139 - 465	5.9e-19	Citrate transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010076)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G12860 AT5G12860
fragaria_vesca	FvH4_3g28880
malus_domestica	MD03G1175800.v1.1 MD11G1193500.v1.1
prunus_persica	Prupe.4G248000_v2.0.a1
pyrus_communis	pycom03g13320 pycom11g16910
rosa_chinensis	RchiOBHm_Chr5g0051981
rosa_laevigata	RLG00000034849
rosa_multiflora	Rmu_co8424073.1_g000002 Rmu_ssc0000466.1_g000003
rosa_roxburghii	Rroxscaffold_1G00027750
rosa_rugosa	Rorug05G0275700 Rorug05G0275800
rosa_samantha	Rh5AG347500 Rh5BG358500 Rh5CG383900 Rh5DG374000 Rh7CG246800
rosa_wichuraiana	Rw5G032850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1091
AatII	GACGTC	1 cut(s)	830
AccB1I	GGYRCC	4 cut(s)	446, 682, 976, 1502
AccB7I	CCANNNNNTGG	2 cut(s)	1376, 1499
AccBSI	CCGCTC	1 cut(s)	134
AccII	CGCG	9 cut(s)	198, 222, 296, 317, 326, 380, 506, 884, 1031
AclWI	GGATC	4 cut(s)	39, 331, 521, 805
AcoI	YGGCCR	2 cut(s)	843, 867
AcsI	RAATTY	1 cut(s)	886
AcvI	CACGTG	1 cut(s)	816
AcyI	GRCGYC	5 cut(s)	5, 366, 447, 683, 827
AfaI	GTAC	4 cut(s)	608, 653, 992, 1486
AfiI	CCNNNNNNNGG	9 cut(s)	290, 591, 1009, 1257, 1376, 1499, 1554, 1611, 1612
AflIII	ACRYGT	1 cut(s)	378
AgsI	TTSAA	2 cut(s)	145, 898
AjnI	CCWGG	3 cut(s)	1211, 1241, 1313
AloI	GAACNNNNNNTCC	2 cut(s)	1170, 1202
AluBI	AGCT	8 cut(s)	388, 633, 1054, 1166, 1229, 1373, 1430, 1568
AluI	AGCT	8 cut(s)	388, 633, 1054, 1166, 1229, 1373, 1430, 1568
Alw21I	GWGCWC	2 cut(s)	483, 1480
Alw26I	GTCTC	1 cut(s)	706
AlwI	GGATC	4 cut(s)	39, 331, 521, 805
AlwNI	CAGNNNCTG	3 cut(s)	391, 436, 1571
Ama87I	CYCGRG	2 cut(s)	567, 590
AoxI	GGCC	7 cut(s)	237, 507, 586, 672, 843, 867, 1540
ApeKI	GCWGC	8 cut(s)	280, 385, 473, 1020, 1166, 1265, 1366, 1430
ApoI	RAATTY	1 cut(s)	886
AspLEI	GCGC	6 cut(s)	296, 449, 685, 884, 1033, 1586
AspS9I	GGNCC	4 cut(s)	116, 780, 924, 1510
AsuC2I	CCSGG	2 cut(s)	114, 954
AsuHPI	GGTGA	5 cut(s)	10, 361, 748, 844, 1024
AvaI	CYCGRG	2 cut(s)	567, 590
AvaII	GGWCC	4 cut(s)	116, 780, 924, 1510
BaeGI	GKGCMC	1 cut(s)	954
BanI	GGYRCC	4 cut(s)	446, 682, 976, 1502
BanII	GRGCYC	1 cut(s)	103
BauI	CACGAG	1 cut(s)	708
BbrPI	CACGTG	1 cut(s)	816
BbsI	GAAGAC	2 cut(s)	494, 1567
Bbv12I	GWGCWC	2 cut(s)	483, 1480
BbvI	GCAGC	8 cut(s)	292, 397, 485, 1032, 1153, 1252, 1378, 1417
BccI	CCATC	2 cut(s)	329, 419
BceAI	ACGGC	2 cut(s)	434, 991
BciT130I	CCWGG	3 cut(s)	1213, 1243, 1315
BcnI	CCSGG	2 cut(s)	114, 954
BcoDI	GTCTC	1 cut(s)	706
BfaI	CTAG	1 cut(s)	1473
BfmI	CTRYAG	1 cut(s)	1329
BfoI	RGCGCY	3 cut(s)	450, 686, 1587
BglI	GCCNNNNNGGC	2 cut(s)	680, 866
BlpI	GCTNAGC	1 cut(s)	1225
Bme1390I	CCNGG	5 cut(s)	114, 954, 1213, 1243, 1315
Bme18I	GGWCC	4 cut(s)	116, 780, 924, 1510
BmeT110I	CYCGRG	2 cut(s)	567, 590
BmgT120I	GGNCC	4 cut(s)	116, 780, 924, 1510
BmiI	GGNNCC	7 cut(s)	262, 448, 684, 781, 978, 1069, 1504
BmrFI	CCNGG	5 cut(s)	114, 954, 1213, 1243, 1315
BmrI	ACTGGG	2 cut(s)	78, 1600
BmsI	GCATC	2 cut(s)	798, 1144
BmuI	ACTGGG	2 cut(s)	78, 1600
BpiI	GAAGAC	2 cut(s)	494, 1567
BplI	GAGNNNNNCTC	2 cut(s)	324, 356
BpmI	CTGGAG	1 cut(s)	1076
Bpu10I	CCTNAGC	2 cut(s)	155, 936
Bpu1102I	GCTNAGC	1 cut(s)	1225
BpuEI	CTTGAG	1 cut(s)	1483
BpuMI	CCSGG	2 cut(s)	114, 954
BsaAI	YACGTR	1 cut(s)	816
BsaHI	GRCGYC	5 cut(s)	5, 366, 447, 683, 827
BsaJI	CCNNGG	9 cut(s)	220, 284, 504, 536, 568, 589, 861, 1242, 1506
BsaXI	ACNNNNNCTCC	2 cut(s)	462, 492
Bsc4I	CCNNNNNNNGG	9 cut(s)	290, 591, 1009, 1257, 1376, 1499, 1554, 1611, 1612
Bse118I	RCCGGY	4 cut(s)	251, 362, 584, 685
Bse1I	ACTGG	5 cut(s)	84, 610, 1204, 1422, 1606
Bse3DI	GCAATG	4 cut(s)	165, 772, 1272, 1284
BseBI	CCWGG	3 cut(s)	1213, 1243, 1315
BseDI	CCNNGG	9 cut(s)	220, 284, 504, 536, 568, 589, 861, 1242, 1506
BseGI	GGATG	1 cut(s)	1159
BseLI	CCNNNNNNNGG	9 cut(s)	290, 591, 1009, 1257, 1376, 1499, 1554, 1611, 1612
BseMI	GCAATG	4 cut(s)	165, 772, 1272, 1284
BseMII	CTCAG	3 cut(s)	55, 443, 1221
BseNI	ACTGG	5 cut(s)	84, 610, 1204, 1422, 1606
BseSI	GKGCMC	1 cut(s)	954
BseXI	GCAGC	8 cut(s)	292, 397, 485, 1032, 1153, 1252, 1378, 1417
BseYI	CCCAGC	1 cut(s)	1283
BsgI	GTGCAG	1 cut(s)	1251
Bsh1236I	CGCG	9 cut(s)	198, 222, 296, 317, 326, 380, 506, 884, 1031
BshFI	GGCC	7 cut(s)	239, 509, 588, 674, 845, 869, 1542
BshNI	GGYRCC	4 cut(s)	446, 682, 976, 1502
BsiHKAI	GWGCWC	2 cut(s)	483, 1480
BsiHKCI	CYCGRG	2 cut(s)	567, 590
BsiSI	CCGG	8 cut(s)	114, 252, 272, 363, 585, 686, 714, 954
BslFI	GGGAC	4 cut(s)	72, 727, 793, 1259
BslI	CCNNNNNNNGG	9 cut(s)	290, 591, 1009, 1257, 1376, 1499, 1554, 1611, 1612
BsmAI	GTCTC	1 cut(s)	706
BsmBI	CGTCTC	1 cut(s)	706
BsmFI	GGGAC	4 cut(s)	72, 727, 793, 1259
BsmI	GAATGC	3 cut(s)	1380, 1457, 1517
BsnI	GGCC	7 cut(s)	239, 509, 588, 674, 845, 869, 1542
BsoBI	CYCGRG	2 cut(s)	567, 590
Bsp1286I	GDGCHC	4 cut(s)	103, 483, 954, 1480
Bsp143I	GATC	5 cut(s)	44, 312, 336, 526, 797
Bsp1720I	GCTNAGC	1 cut(s)	1225
Bsp19I	CCATGG	3 cut(s)	284, 861, 1506
Bsp68I	TCGCGA	1 cut(s)	326
BspANI	GGCC	7 cut(s)	239, 509, 588, 674, 845, 869, 1542
BspCNI	CTCAG	3 cut(s)	54, 442, 1222
BspFNI	CGCG	9 cut(s)	198, 222, 296, 317, 326, 380, 506, 884, 1031
BspLI	GGNNCC	7 cut(s)	262, 448, 684, 781, 978, 1069, 1504
BspPI	GGATC	4 cut(s)	39, 331, 521, 805
BspQI	GCTCTTC	1 cut(s)	1010
BspT107I	GGYRCC	4 cut(s)	446, 682, 976, 1502
BsrBI	CCGCTC	1 cut(s)	134
BsrDI	GCAATG	4 cut(s)	165, 772, 1272, 1284
BsrFI	RCCGGY	4 cut(s)	251, 362, 584, 685
BsrI	ACTGG	5 cut(s)	84, 610, 1204, 1422, 1606
BssAI	RCCGGY	4 cut(s)	251, 362, 584, 685
BssECI	CCNNGG	9 cut(s)	220, 284, 504, 536, 568, 589, 861, 1242, 1506
BssMI	GATC	5 cut(s)	44, 312, 336, 526, 797
BssNI	GRCGYC	5 cut(s)	5, 366, 447, 683, 827
BssSI	CACGAG	1 cut(s)	708
BssT1I	CCWWGG	3 cut(s)	284, 861, 1506
Bst2BI	CACGAG	1 cut(s)	708
Bst2UI	CCWGG	3 cut(s)	1213, 1243, 1315
Bst4CI	ACNGT	4 cut(s)	232, 656, 1117, 1330
Bst6I	CTCTTC	1 cut(s)	1010
BstACI	GRCGYC	5 cut(s)	5, 366, 447, 683, 827
BstAPI	GCANNNNNTGC	1 cut(s)	1274
BstBAI	YACGTR	1 cut(s)	816
BstC8I	GCNNGC	9 cut(s)	12, 253, 364, 687, 757, 1099, 1371, 1588, 1602
BstDEI	CTNAG	7 cut(s)	41, 122, 155, 429, 936, 1225, 1230
BstDSI	CCRYGG	6 cut(s)	220, 284, 504, 536, 861, 1506
BstF5I	GGATG	1 cut(s)	1159
BstFNI	CGCG	9 cut(s)	198, 222, 296, 317, 326, 380, 506, 884, 1031
BstH2I	RGCGCY	3 cut(s)	450, 686, 1587
BstHHI	GCGC	6 cut(s)	296, 449, 685, 884, 1033, 1586
BstKTI	GATC	5 cut(s)	47, 315, 339, 529, 800
BstMAI	GTCTC	1 cut(s)	706
BstMBI	GATC	5 cut(s)	44, 312, 336, 526, 797
BstNI	CCWGG	3 cut(s)	1213, 1243, 1315
BstSCI	CCNGG	5 cut(s)	112, 952, 1211, 1241, 1313
BstSFI	CTRYAG	1 cut(s)	1329
BstSLI	GKGCMC	1 cut(s)	954
BstUI	CGCG	9 cut(s)	198, 222, 296, 317, 326, 380, 506, 884, 1031
BstV1I	GCAGC	8 cut(s)	292, 397, 485, 1032, 1153, 1252, 1378, 1417
BstV2I	GAAGAC	2 cut(s)	494, 1567
BstX2I	RGATCY	1 cut(s)	44
BstXI	CCANNNNNNTGG	1 cut(s)	1534
BstYI	RGATCY	1 cut(s)	44
BsuRI	GGCC	7 cut(s)	239, 509, 588, 674, 845, 869, 1542
BtgI	CCRYGG	6 cut(s)	220, 284, 504, 536, 861, 1506
BtgZI	GCGATG	4 cut(s)	307, 314, 529, 1460
BtsCI	GGATG	1 cut(s)	1159
BtsIMutI	CAGTG	3 cut(s)	965, 1429, 1613
BtuMI	TCGCGA	1 cut(s)	326
Cac8I	GCNNGC	9 cut(s)	12, 253, 364, 687, 757, 1099, 1371, 1588, 1602
CaiI	CAGNNNCTG	3 cut(s)	391, 436, 1571
CfoI	GCGC	6 cut(s)	296, 449, 685, 884, 1033, 1586
Cfr10I	RCCGGY	4 cut(s)	251, 362, 584, 685
Cfr13I	GGNCC	4 cut(s)	116, 780, 924, 1510
Cfr42I	CCGCGG	2 cut(s)	223, 507
CseI	GACGC	5 cut(s)	306, 355, 499, 739, 1037
Csp6I	GTAC	4 cut(s)	607, 652, 991, 1485
CviAII	CATG	7 cut(s)	285, 847, 862, 1072, 1257, 1507, 1534
CviQI	GTAC	4 cut(s)	607, 652, 991, 1485
DdeI	CTNAG	7 cut(s)	41, 122, 155, 429, 936, 1225, 1230
DinI	GGCGCC	2 cut(s)	448, 684
DpnI	GATC	5 cut(s)	46, 314, 338, 528, 799
DpnII	GATC	5 cut(s)	44, 312, 336, 526, 797
EaeI	YGGCCR	2 cut(s)	843, 867
Eam1104I	CTCTTC	1 cut(s)	1010
EarI	CTCTTC	1 cut(s)	1010
EciI	GGCGGA	2 cut(s)	505, 1362
Eco130I	CCWWGG	3 cut(s)	284, 861, 1506
Eco147I	AGGCCT	1 cut(s)	674
Eco24I	GRGCYC	1 cut(s)	103
Eco47I	GGWCC	4 cut(s)	116, 780, 924, 1510
Eco72I	CACGTG	1 cut(s)	816
Eco88I	CYCGRG	2 cut(s)	567, 590
EcoRII	CCWGG	3 cut(s)	1211, 1241, 1313
EcoT14I	CCWWGG	3 cut(s)	284, 861, 1506
EcoT38I	GRGCYC	1 cut(s)	103
EgeI	GGCGCC	2 cut(s)	448, 684
EheI	GGCGCC	2 cut(s)	448, 684
ErhI	CCWWGG	3 cut(s)	284, 861, 1506
Esp3I	CGTCTC	1 cut(s)	706
FaeI	CATG	7 cut(s)	288, 850, 865, 1075, 1260, 1510, 1537
FalI	AAGNNNNNCTT	2 cut(s)	1208, 1240
FaqI	GGGAC	4 cut(s)	72, 727, 793, 1259
FatI	CATG	7 cut(s)	284, 846, 861, 1071, 1256, 1506, 1533
FauI	CCCGC	3 cut(s)	203, 367, 1011
FokI	GGATG	1 cut(s)	1166
FriOI	GRGCYC	1 cut(s)	103
FspBI	CTAG	1 cut(s)	1473
GlaI	GCGC	6 cut(s)	295, 448, 684, 883, 1032, 1585
GsaI	CCCAGC	1 cut(s)	1287
GsuI	CTGGAG	1 cut(s)	1076
HaeII	RGCGCY	3 cut(s)	450, 686, 1587
HaeIII	GGCC	7 cut(s)	239, 509, 588, 674, 845, 869, 1542
HapII	CCGG	8 cut(s)	114, 252, 272, 363, 585, 686, 714, 954
HgaI	GACGC	5 cut(s)	306, 355, 499, 739, 1037
HhaI	GCGC	6 cut(s)	296, 449, 685, 884, 1033, 1586
Hin1I	GRCGYC	5 cut(s)	5, 366, 447, 683, 827
Hin1II	CATG	7 cut(s)	288, 850, 865, 1075, 1260, 1510, 1537
Hin6I	GCGC	6 cut(s)	294, 447, 683, 882, 1031, 1584
HinP1I	GCGC	6 cut(s)	294, 447, 683, 882, 1031, 1584
HpaII	CCGG	8 cut(s)	114, 252, 272, 363, 585, 686, 714, 954
HphI	GGTGA	5 cut(s)	10, 361, 748, 844, 1024
Hpy166II	GTNNAC	2 cut(s)	924, 1452
Hpy188I	TCNGA	9 cut(s)	44, 98, 215, 312, 419, 470, 531, 825, 1661
Hpy188III	TCNNGA	7 cut(s)	48, 61, 325, 484, 580, 592, 1462
Hpy8I	GTNNAC	2 cut(s)	924, 1452
HpyAV	CCTTC	9 cut(s)	67, 181, 508, 520, 529, 565, 779, 904, 1210
HpyCH4III	ACNGT	4 cut(s)	232, 656, 1117, 1330
HpyCH4IV	ACGT	2 cut(s)	815, 827
HpyCH4V	TGCA	5 cut(s)	1043, 1157, 1268, 1277, 1517
HpyF3I	CTNAG	7 cut(s)	41, 122, 155, 429, 936, 1225, 1230
HpySE526I	ACGT	2 cut(s)	815, 827
Hsp92I	GRCGYC	5 cut(s)	5, 366, 447, 683, 827
Hsp92II	CATG	7 cut(s)	288, 850, 865, 1075, 1260, 1510, 1537
HspAI	GCGC	6 cut(s)	294, 447, 683, 882, 1031, 1584
KasI	GGCGCC	2 cut(s)	446, 682
KroI	GCCGGC	3 cut(s)	251, 362, 685
KroNI	GCCGGC	3 cut(s)	253, 364, 687
KspI	CCGCGG	2 cut(s)	223, 507
Kzo9I	GATC	5 cut(s)	44, 312, 336, 526, 797
LguI	GCTCTTC	1 cut(s)	1010
LmnI	GCTCC	4 cut(s)	211, 470, 1427, 1573
Lsp1109I	GCAGC	8 cut(s)	292, 397, 485, 1032, 1153, 1252, 1378, 1417
LweI	GCATC	2 cut(s)	798, 1144
MaeI	CTAG	1 cut(s)	1473
MaeII	ACGT	2 cut(s)	815, 827
MaeIII	GTNAC	4 cut(s)	367, 1159, 1195, 1207
MalI	GATC	5 cut(s)	46, 314, 338, 528, 799
MbiI	CCGCTC	1 cut(s)	134
MboI	GATC	5 cut(s)	44, 312, 336, 526, 797
MboII	GAAGA	5 cut(s)	499, 550, 553, 1027, 1567
MflI	RGATCY	1 cut(s)	44
MhlI	GDGCHC	4 cut(s)	103, 483, 954, 1480
MluCI	AATT	3 cut(s)	600, 791, 886
MluI	ACGCGT	1 cut(s)	378
Mly113I	GGCGCC	2 cut(s)	447, 683
MlyI	GAGTC	5 cut(s)	87, 197, 349, 459, 1241
MmeI	TCCRAC	3 cut(s)	397, 1551, 1645
MreI	CGCCGGCG	3 cut(s)	251, 362, 685
MroNI	GCCGGC	3 cut(s)	251, 362, 685
MseI	TTAA	3 cut(s)	854, 890, 906
MslI	CAYNNNNRTG	1 cut(s)	1277
MspA1I	CMGCKG	5 cut(s)	222, 476, 506, 733, 1166
MspI	CCGG	8 cut(s)	114, 252, 272, 363, 585, 686, 714, 954
MspR9I	CCNGG	5 cut(s)	114, 954, 1213, 1243, 1315
Mva1269I	GAATGC	3 cut(s)	1380, 1457, 1517
MvaI	CCWGG	3 cut(s)	1213, 1243, 1315
MvnI	CGCG	9 cut(s)	198, 222, 296, 317, 326, 380, 506, 884, 1031
NaeI	GCCGGC	3 cut(s)	253, 364, 687
NarI	GGCGCC	2 cut(s)	447, 683
NciI	CCSGG	2 cut(s)	114, 954
NcoI	CCATGG	3 cut(s)	284, 861, 1506
NdeII	GATC	5 cut(s)	44, 312, 336, 526, 797
NgoMIV	GCCGGC	3 cut(s)	251, 362, 685
NlaIII	CATG	7 cut(s)	288, 850, 865, 1075, 1260, 1510, 1537
NlaIV	GGNNCC	7 cut(s)	262, 448, 684, 781, 978, 1069, 1504
NmeAIII	GCCGAG	3 cut(s)	117, 211, 423
NmuCI	GTSAC	2 cut(s)	367, 1195
NruI	TCGCGA	1 cut(s)	326
PceI	AGGCCT	1 cut(s)	674
PciSI	GCTCTTC	1 cut(s)	1010
PcsI	WCGNNNNNNNCGW	2 cut(s)	411, 836
PctI	GAATGC	3 cut(s)	1380, 1457, 1517
PdiI	GCCGGC	3 cut(s)	253, 364, 687
PfeI	GAWTC	5 cut(s)	420, 532, 595, 691, 1623
PflFI	GACNNNGTC	1 cut(s)	114
PflMI	CCANNNNNTGG	2 cut(s)	1376, 1499
PleI	GAGTC	5 cut(s)	87, 196, 349, 459, 1240
PluTI	GGCGCC	2 cut(s)	450, 686
PmaCI	CACGTG	1 cut(s)	816
PmlI	CACGTG	1 cut(s)	816
PpsI	GAGTC	5 cut(s)	87, 196, 349, 459, 1240
Ppu21I	YACGTR	1 cut(s)	816
PsiI	TTATAA	1 cut(s)	1091
Psp6I	CCWGG	3 cut(s)	1211, 1241, 1313
PspCI	CACGTG	1 cut(s)	816
PspFI	CCCAGC	1 cut(s)	1283
PspGI	CCWGG	3 cut(s)	1211, 1241, 1313
PspN4I	GGNNCC	7 cut(s)	262, 448, 684, 781, 978, 1069, 1504
PspPI	GGNCC	4 cut(s)	116, 780, 924, 1510
PstNI	CAGNNNCTG	3 cut(s)	391, 436, 1571
PsuI	RGATCY	1 cut(s)	44
PsyI	GACNNNGTC	1 cut(s)	114
PvuII	CAGCTG	1 cut(s)	1166
RruI	TCGCGA	1 cut(s)	326
RsaI	GTAC	4 cut(s)	608, 653, 992, 1486
RsaNI	GTAC	4 cut(s)	607, 652, 991, 1485
RseI	CAYNNNNRTG	1 cut(s)	1277
SacII	CCGCGG	2 cut(s)	223, 507
SapI	GCTCTTC	1 cut(s)	1010
SaqAI	TTAA	3 cut(s)	854, 890, 906
Sau3AI	GATC	5 cut(s)	44, 312, 336, 526, 797
Sau96I	GGNCC	4 cut(s)	116, 780, 924, 1510
SchI	GAGTC	5 cut(s)	87, 197, 349, 459, 1241
ScrFI	CCNGG	5 cut(s)	114, 954, 1213, 1243, 1315
SduI	GDGCHC	4 cut(s)	103, 483, 954, 1480
SfaNI	GCATC	2 cut(s)	798, 1144
SfcI	CTRYAG	1 cut(s)	1329
SfoI	GGCGCC	2 cut(s)	448, 684
Sfr303I	CCGCGG	2 cut(s)	223, 507
SgrAI	CRCCGGYG	3 cut(s)	251, 362, 685
SgrBI	CCGCGG	2 cut(s)	223, 507
SinI	GGWCC	4 cut(s)	116, 780, 924, 1510
SmiMI	CAYNNNNRTG	1 cut(s)	1277
SmlI	CTYRAG	1 cut(s)	1462
SmoI	CTYRAG	1 cut(s)	1462
Sse9I	AATT	3 cut(s)	600, 791, 886
SseBI	AGGCCT	1 cut(s)	674
SspDI	GGCGCC	2 cut(s)	446, 682
SspI	AATATT	1 cut(s)	1645
SspMI	CTAG	1 cut(s)	1473
StuI	AGGCCT	1 cut(s)	674
StyD4I	CCNGG	5 cut(s)	112, 952, 1211, 1241, 1313
StyI	CCWWGG	3 cut(s)	284, 861, 1506
TaaI	ACNGT	4 cut(s)	232, 656, 1117, 1330
TaiI	ACGT	2 cut(s)	818, 830
TaqI	TCGA	1 cut(s)	598
TaqII	GACCGA	2 cut(s)	797, 941
TasI	AATT	3 cut(s)	600, 791, 886
TfiI	GAWTC	5 cut(s)	420, 532, 595, 691, 1623
Tru1I	TTAA	3 cut(s)	854, 890, 906
Tru9I	TTAA	3 cut(s)	854, 890, 906
TscAI	CASTG	3 cut(s)	972, 1429, 1613
TseFI	GTSAC	2 cut(s)	367, 1195
TseI	GCWGC	8 cut(s)	280, 385, 473, 1020, 1166, 1265, 1366, 1430
Tsp45I	GTSAC	2 cut(s)	367, 1195
TspDTI	ATGAA	3 cut(s)	317, 565, 1675
TspGWI	ACGGA	4 cut(s)	525, 688, 864, 1624
TspRI	CASTG	3 cut(s)	972, 1429, 1613
Tth111I	GACNNNGTC	1 cut(s)	114
Van91I	CCANNNNNTGG	2 cut(s)	1376, 1499
VpaK11BI	GGWCC	4 cut(s)	116, 780, 924, 1510
XapI	RAATTY	1 cut(s)	886
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1556
XspI	CTAG	1 cut(s)	1473
ZraI	GACGTC	1 cut(s)	828

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.