Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0009922

Physical Location & Seq

Genomic Coordinates Forward (+)

56837074 .. 56842207

Gene Structure 5134 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000034906

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1722 bp

ATGGAGGGAAAGCGGTCAAGAGAGAGGTCACAGACCCGTCCCCGCCATTTGCTAACAAAAATCAAAGAATTTACTCGAGCTCTTGTGAGAGATCTCAGCGACGGCCGGTCACCGGAGATTCTCATCCATCGCTTCCGAAATTACTGCTCCAATCCCTCCACAAATTGCTATTGTAGCTCTGATTTGCCGAAAGGGAAGGAGACGCTCACACTTTGGAAAGAAACCCATGTTCATAGATTAGATGTTCTGCTTAGGGTTCTTGTAATTGTTCAGCAACTTCTGCAAGAAAACAGACATGGGTCTAAGAGAGATATCTATTACATGCACCCTTCAATATTTTCAGATCAGTCAGTTGTAGACCGTGCAATCAATGACATCTGCATCCTTCTGCAGTGTAGTCGCCACAATTTGAACGTGGTGTCTGTAGGAAAGGGGTTGGTAATGGGCTGGTTAAGGTTCGCAGAGGCTGGAAACATGTTTGATTGCATAAATAGACCAAACACTGCTTACCCTGTTCCAGTTCATGTTGAAGAGGTCAAAGATATTGTTAGTGTTGCCCAGTACATACTTGTTGTGGAGAAAGAATCAGTTTTTCAACGATTGGCAAATGACCAGTTTTGTAACACAAACCACTGCATTGTCATCACCGGACGTGGATATCCTGATATTTCCACAAGAAGGTTTTTGGGGCTCCTTGTTGATACATTACATATCCCTGTCTATTGCTTGGTAGATTGTGATCCCTACGGTTTTGACATCTTGTCCACATATCGGTTTGGTTCTCTGCAAATGGCGTATGATGCAAAATTTCTACGGGTCCCCGAGATAATCTGGCTTGGAGCCTTCCCTTTGGACTCGGAGAAGTACCATCTTCCACACCAGTGTCTCCTTCCTTTGACTGCAGAAGACAAGAGGAAAACTGAAGCCATGTTACAGAGATGCTACTTAGAAAGAGAAGTGCCACAGTGGAGATTGGAGCTACAGTTGATGCTGGAAAGAGGCATGAAATTTGAGCTAGAAGCATTGTCTGTGCATGAACTTTCCTTTTTGTCGACCGAGTACATACCATCAAAAATTCAAGGCGTCGAAAGACTGCAGTATGAACTTAGCTATCAAATGTGGAACCAGATTCATTCAGTTGATTTTGTTCTTTTGCAGACATGTGTTATGAATGCAAATATGGATTGCGAAAAATGTAGGTTAAAAGTCTATGAAGTCGTGATCAATGTCTATGGTGCTTATTCAATAGACATAGATGCAGAACAATCGATGGTAAAAGTTTCAGGCAAAGTAAATCCAAAGATAATTCTACAGTTGCTTGGAGGGAAACATGCCAAGGTAAAAAGTGTCAAGTTTGATAGTGAGGAACCATCCATGGGGGGCGGTTATCCCCCTCCCCCTCTTCCTCCTCTTCCCCCATACGGAATGGGGCTAGGGCCCCATCCTTATTCCTATCCGAATGGAGGGCCATATGACTACCCCATGATGATGCCACCACTTCTGATGCTGCCACCATCACCACCACCATCAGTGGCAGCACAACCTCAACAAAAACCAACATTACTATCAGAAGCACCACCACAGAATTCGGCGGCCACAGCACAACCACAAAATTCAGGAACGTCAGCACCACCAACCACTGATGTTGCAAAGGAGGCAGTGATACCCTCAGATAAGAAGTCTAAGCGTTGCGGCATTGTCAAGAATTGCAGCATTATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000706 GO:0000724 GO:0000725 GO:0000729 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0003916 GO:0003918 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007127 GO:0007129 GO:0007131 GO:0008094 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0016853 GO:0016887 GO:0016889 GO:0016894 GO:0017111 GO:0022402 GO:0022414 GO:0022607 GO:0031974 GO:0031981 GO:0033554 GO:0034641 GO:0035825 GO:0042138 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0045132 GO:0045143 GO:0046483 GO:0048285 GO:0050896 GO:0051026 GO:0051276 GO:0051321 GO:0051716 GO:0061505 GO:0061982 GO:0070013 GO:0070192 GO:0071704 GO:0071840 GO:0090304 GO:0090305 GO:0097159 GO:0098813 GO:0140013 GO:0140097 GO:1901360 GO:1901363 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04113 map04113

Pfam Domains

Protein Families

TP6A_N

Protein Analysis

574

Amino Acids

64.9

Weight (kDa)

8.03

Isoelectric Point (pI)

48.44

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TP6A_N	PF04406	79 - 139	5.6e-21	Type IIB DNA topoisomerase
TOP6A-Spo11_Toprim	PF21180	188 - 359	2.8e-64	Topoisomerase 6 subunit A/Spo11, Toprim domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009922)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G13170 AT3G13170 AT3G13170
fragaria_vesca	FvH4_3g29420
malus_domestica	MD03G1184400.v1.1 MD03G1184700.v1.1
prunus_persica	Prupe.4G241800_v2.0.a1 Prupe.4G241800_v2.0.a1
pyrus_communis	pycom03g13780
rosa_chinensis	RchiOBHm_Chr5g0053841
rosa_laevigata	RLG00000034906
rosa_multiflora	Rmu_sc0007356.1_g000010
rosa_roxburghii	Rroxscaffold_1G00026760
rosa_rugosa	Rorug05G0283600 Rorug05G0283700
rosa_samantha	Rh5AG353400 Rh5BG365000 Rh5CG390100 Rh5DG380000
rosa_wichuraiana	Rw0G002140 Rw0G009550

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	357, 1052
AciI	CCGC	5 cut(s)	13, 43, 1383, 1592, 1692
AclWI	GGATC	1 cut(s)	734
AcoI	YGGCCR	2 cut(s)	103, 1593
AcsI	RAATTY	6 cut(s)	68, 806, 1007, 1074, 1585, 1612
AcuI	CTGAAG	1 cut(s)	942
AcyI	GRCGYC	1 cut(s)	1083
AfaI	GTAC	3 cut(s)	563, 866, 1061
AfiI	CCNNNNNNNGG	6 cut(s)	112, 678, 771, 1376, 1421, 1463
AflIII	ACRYGT	2 cut(s)	474, 1160
AgsI	TTSAA	6 cut(s)	333, 412, 530, 596, 1079, 1245
AhdI	GACNNNNNGTC	2 cut(s)	106, 760
AjiI	CACGTC	1 cut(s)	653
AleI	CACNNNNGTG	1 cut(s)	880
AluBI	AGCT	5 cut(s)	80, 177, 979, 1015, 1110
AluI	AGCT	5 cut(s)	80, 177, 979, 1015, 1110
Alw21I	GWGCWC	1 cut(s)	82
Alw26I	GTCTC	2 cut(s)	194, 890
AlwI	GGATC	1 cut(s)	734
AlwNI	CAGNNNCTG	1 cut(s)	467
Ama87I	CYCGRG	2 cut(s)	75, 821
AoxI	GGCC	4 cut(s)	103, 1436, 1466, 1593
ApaI	GGGCCC	1 cut(s)	1440
ApeKI	GCWGC	3 cut(s)	1507, 1535, 1710
ApoI	RAATTY	6 cut(s)	68, 806, 1007, 1074, 1585, 1612
AspS9I	GGNCC	4 cut(s)	817, 1436, 1437, 1466
AsuHPI	GGTGA	3 cut(s)	102, 637, 1509
AvaI	CYCGRG	2 cut(s)	75, 821
AvaII	GGWCC	1 cut(s)	817
BaeGI	GKGCMC	1 cut(s)	1440
BanII	GRGCYC	3 cut(s)	82, 693, 1440
BarI	GAAGNNNNNNTAC	2 cut(s)	915, 947
BbsI	GAAGAC	1 cut(s)	912
Bbv12I	GWGCWC	1 cut(s)	82
BbvI	GCAGC	2 cut(s)	1494, 1547
BccI	CCATC	8 cut(s)	135, 876, 1075, 1264, 1378, 1449, 1522, 1534
BceAI	ACGGC	1 cut(s)	118
BcgI	CGANNNNNNTGC	6 cut(s)	126, 160, 380, 414, 1248, 1282
BclI	TGATCA	1 cut(s)	1221
BcoDI	GTCTC	2 cut(s)	194, 890
BfaI	CTAG	2 cut(s)	1016, 1433
BfmI	CTRYAG	6 cut(s)	389, 423, 900, 980, 1094, 1310
BglII	AGATCT	1 cut(s)	91
BisI	GCNGC	5 cut(s)	1508, 1536, 1593, 1693, 1711
BlsI	GCNGC	5 cut(s)	1509, 1537, 1594, 1694, 1712
Bme18I	GGWCC	1 cut(s)	817
BmeRI	GACNNNNNGTC	2 cut(s)	106, 760
BmeT110I	CYCGRG	2 cut(s)	75, 821
BmgBI	CACGTC	1 cut(s)	653
BmgT120I	GGNCC	4 cut(s)	817, 1436, 1437, 1466
BmiI	GGNNCC	8 cut(s)	692, 818, 819, 841, 1124, 1368, 1438, 1439
BmrI	ACTGGG	1 cut(s)	553
BmsI	GCATC	7 cut(s)	390, 790, 929, 978, 1246, 1479, 1494
BmuI	ACTGGG	1 cut(s)	553
BoxI	GACNNNNGTC	1 cut(s)	298
BpiI	GAAGAC	1 cut(s)	912
Bpu10I	CCTNAGC	1 cut(s)	251
Bsa29I	ATCGAT	1 cut(s)	1268
BsaBI	GATNNNNATC	2 cut(s)	122, 738
BsaHI	GRCGYC	1 cut(s)	1083
BsaJI	CCNNGG	2 cut(s)	1335, 1374
BsaWI	WCCGGW	2 cut(s)	112, 647
BsaXI	ACNNNNNCTCC	2 cut(s)	968, 998
Bsc4I	CCNNNNNNNGG	6 cut(s)	112, 678, 771, 1376, 1421, 1463
Bse118I	RCCGGY	1 cut(s)	105
Bse1I	ACTGG	4 cut(s)	518, 559, 613, 880
Bse8I	GATNNNNATC	2 cut(s)	122, 738
BseCI	ATCGAT	1 cut(s)	1268
BseDI	CCNNGG	2 cut(s)	1335, 1374
BseGI	GGATG	4 cut(s)	123, 381, 1370, 1441
BseJI	GATNNNNATC	2 cut(s)	122, 738
BseLI	CCNNNNNNNGG	6 cut(s)	112, 678, 771, 1376, 1421, 1463
BseMII	CTCAG	2 cut(s)	109, 1683
BseNI	ACTGG	4 cut(s)	518, 559, 613, 880
BseRI	GAGGAG	1 cut(s)	1398
BseSI	GKGCMC	1 cut(s)	1440
BseX3I	CGGCCG	1 cut(s)	103
BseXI	GCAGC	2 cut(s)	1494, 1547
Bsh1285I	CGRYCG	2 cut(s)	106, 1056
BshFI	GGCC	4 cut(s)	105, 1438, 1468, 1595
BshVI	ATCGAT	1 cut(s)	1268
BsiEI	CGRYCG	2 cut(s)	106, 1056
BsiHKAI	GWGCWC	1 cut(s)	82
BsiHKCI	CYCGRG	2 cut(s)	75, 821
BsiSI	CCGG	3 cut(s)	106, 113, 648
BslFI	GGGAC	2 cut(s)	24, 803
BslI	CCNNNNNNNGG	6 cut(s)	112, 678, 771, 1376, 1421, 1463
BsmAI	GTCTC	2 cut(s)	194, 890
BsmBI	CGTCTC	1 cut(s)	194
BsmFI	GGGAC	2 cut(s)	24, 803
BsmI	GAATGC	1 cut(s)	1177
BsnI	GGCC	4 cut(s)	105, 1438, 1468, 1595
BsoBI	CYCGRG	2 cut(s)	75, 821
Bsp120I	GGGCCC	1 cut(s)	1436
Bsp1286I	GDGCHC	3 cut(s)	82, 693, 1440
Bsp143I	GATC	4 cut(s)	91, 343, 739, 1221
Bsp19I	CCATGG	1 cut(s)	1374
BspACI	CCGC	5 cut(s)	13, 43, 1383, 1592, 1692
BspANI	GGCC	4 cut(s)	105, 1438, 1468, 1595
BspCNI	CTCAG	2 cut(s)	108, 1682
BspDI	ATCGAT	1 cut(s)	1268
BspLI	GGNNCC	8 cut(s)	692, 818, 819, 841, 1124, 1368, 1438, 1439
BspMAI	CTGCAG	3 cut(s)	393, 904, 1098
BspPI	GGATC	1 cut(s)	734
BsrFI	RCCGGY	1 cut(s)	105
BsrI	ACTGG	4 cut(s)	518, 559, 613, 880
BssAI	RCCGGY	1 cut(s)	105
BssECI	CCNNGG	2 cut(s)	1335, 1374
BssMI	GATC	4 cut(s)	91, 343, 739, 1221
BssNI	GRCGYC	1 cut(s)	1083
BssT1I	CCWWGG	2 cut(s)	1335, 1374
Bst4CI	ACNGT	5 cut(s)	362, 749, 966, 984, 1314
Bst6I	CTCTTC	3 cut(s)	525, 1407, 1416
BstACI	GRCGYC	1 cut(s)	1083
BstAPI	GCANNNNNTGC	1 cut(s)	280
BstDEI	CTNAG	7 cut(s)	95, 251, 303, 946, 1106, 1669, 1683
BstDSI	CCRYGG	1 cut(s)	1374
BstEII	GGTNACC	1 cut(s)	108
BstF5I	GGATG	4 cut(s)	123, 381, 1370, 1441
BstKTI	GATC	4 cut(s)	94, 346, 742, 1224
BstMAI	GTCTC	2 cut(s)	194, 890
BstMBI	GATC	4 cut(s)	91, 343, 739, 1221
BstMCI	CGRYCG	2 cut(s)	106, 1056
BstMWI	GCNNNNNNNGC	5 cut(s)	174, 280, 800, 1598, 1655
BstNSI	RCATGY	4 cut(s)	325, 478, 1164, 1334
BstPAI	GACNNNNGTC	1 cut(s)	298
BstPI	GGTNACC	1 cut(s)	108
BstSFI	CTRYAG	6 cut(s)	389, 423, 900, 980, 1094, 1310
BstSLI	GKGCMC	1 cut(s)	1440
BstV1I	GCAGC	2 cut(s)	1494, 1547
BstV2I	GAAGAC	1 cut(s)	912
BstX2I	RGATCY	1 cut(s)	91
BstYI	RGATCY	1 cut(s)	91
BstZI	CGGCCG	1 cut(s)	103
Bsu15I	ATCGAT	1 cut(s)	1268
BsuRI	GGCC	4 cut(s)	105, 1438, 1468, 1595
BsuTUI	ATCGAT	1 cut(s)	1268
BtgI	CCRYGG	1 cut(s)	1374
BtgZI	GCGATG	1 cut(s)	113
BtrI	CACGTC	1 cut(s)	653
BtsCI	GGATG	4 cut(s)	123, 381, 1370, 1441
BtsI	GCAGTG	4 cut(s)	398, 501, 631, 1665
BtsIMutI	CAGTG	8 cut(s)	398, 501, 631, 887, 971, 1536, 1638, 1665
CaiI	CAGNNNCTG	1 cut(s)	467
Cfr10I	RCCGGY	1 cut(s)	105
Cfr13I	GGNCC	4 cut(s)	817, 1436, 1437, 1466
ClaI	ATCGAT	1 cut(s)	1268
CseI	GACGC	2 cut(s)	211, 1072
Csp6I	GTAC	3 cut(s)	562, 865, 1060
CspCI	CAANNNNNGTGG	2 cut(s)	1627, 1662
CviQI	GTAC	3 cut(s)	562, 865, 1060
DdeI	CTNAG	7 cut(s)	95, 251, 303, 946, 1106, 1669, 1683
DpnI	GATC	4 cut(s)	93, 345, 741, 1223
DpnII	GATC	4 cut(s)	91, 343, 739, 1221
DriI	GACNNNNNGTC	2 cut(s)	106, 760
EaeI	YGGCCR	2 cut(s)	103, 1593
EagI	CGGCCG	1 cut(s)	103
Eam1104I	CTCTTC	3 cut(s)	525, 1407, 1416
Eam1105I	GACNNNNNGTC	2 cut(s)	106, 760
EarI	CTCTTC	3 cut(s)	525, 1407, 1416
Ecl136II	GAGCTC	1 cut(s)	80
EclXI	CGGCCG	1 cut(s)	103
Eco130I	CCWWGG	2 cut(s)	1335, 1374
Eco24I	GRGCYC	3 cut(s)	82, 693, 1440
Eco32I	GATATC	2 cut(s)	313, 659
Eco47I	GGWCC	1 cut(s)	817
Eco52I	CGGCCG	1 cut(s)	103
Eco53kI	GAGCTC	1 cut(s)	80
Eco57I	CTGAAG	1 cut(s)	942
Eco88I	CYCGRG	2 cut(s)	75, 821
Eco91I	GGTNACC	1 cut(s)	108
EcoICRI	GAGCTC	1 cut(s)	80
EcoO109I	RGGNCCY	3 cut(s)	817, 1436, 1437
EcoO65I	GGTNACC	1 cut(s)	108
EcoRI	GAATTC	1 cut(s)	1585
EcoRV	GATATC	2 cut(s)	313, 659
EcoT14I	CCWWGG	2 cut(s)	1335, 1374
EcoT38I	GRGCYC	3 cut(s)	82, 693, 1440
ErhI	CCWWGG	2 cut(s)	1335, 1374
Esp3I	CGTCTC	1 cut(s)	194
FaqI	GGGAC	2 cut(s)	24, 803
FauI	CCCGC	1 cut(s)	50
FauNDI	CATATG	1 cut(s)	1471
FbaI	TGATCA	1 cut(s)	1221
FblI	GTMKAC	2 cut(s)	357, 1052
Fnu4HI	GCNGC	5 cut(s)	1508, 1536, 1593, 1693, 1711
FokI	GGATG	4 cut(s)	110, 368, 1357, 1428
FriOI	GRGCYC	3 cut(s)	82, 693, 1440
Fsp4HI	GCNGC	5 cut(s)	1508, 1536, 1593, 1693, 1711
FspBI	CTAG	2 cut(s)	1016, 1433
GluI	GCNGC	5 cut(s)	1508, 1536, 1593, 1693, 1711
HaeIII	GGCC	4 cut(s)	105, 1438, 1468, 1595
HapII	CCGG	3 cut(s)	106, 113, 648
HgaI	GACGC	2 cut(s)	211, 1072
Hin1I	GRCGYC	1 cut(s)	1083
HincII	GTYRAC	1 cut(s)	1053
HindII	GTYRAC	1 cut(s)	1053
HinfI	GANTC	4 cut(s)	118, 584, 854, 1129
HpaII	CCGG	3 cut(s)	106, 113, 648
HphI	GGTGA	3 cut(s)	102, 637, 1509
Hpy166II	GTNNAC	3 cut(s)	358, 765, 1053
Hpy188I	TCNGA	8 cut(s)	137, 181, 343, 859, 1458, 1503, 1570, 1672
Hpy188III	TCNNGA	5 cut(s)	18, 662, 1219, 1617, 1702
Hpy8I	GTNNAC	3 cut(s)	358, 765, 1053
Hpy99I	CGWCG	2 cut(s)	104, 1088
HpyAV	CCTTC	6 cut(s)	190, 339, 395, 672, 853, 899
HpyCH4III	ACNGT	5 cut(s)	362, 749, 966, 984, 1314
HpyCH4IV	ACGT	3 cut(s)	414, 652, 1622
HpyF10VI	GCNNNNNNNGC	5 cut(s)	174, 280, 800, 1598, 1655
HpyF3I	CTNAG	7 cut(s)	95, 251, 303, 946, 1106, 1669, 1683
HpySE526I	ACGT	3 cut(s)	414, 652, 1622
Hsp92I	GRCGYC	1 cut(s)	1083
KflI	GGGWCCC	1 cut(s)	817
Ksp22I	TGATCA	1 cut(s)	1221
Kzo9I	GATC	4 cut(s)	91, 343, 739, 1221
LmnI	GCTCC	4 cut(s)	152, 696, 839, 976
Lsp1109I	GCAGC	2 cut(s)	1494, 1547
LweI	GCATC	7 cut(s)	390, 790, 929, 978, 1246, 1479, 1494
MaeI	CTAG	2 cut(s)	1016, 1433
MaeII	ACGT	3 cut(s)	414, 652, 1622
MaeIII	GTNAC	4 cut(s)	27, 108, 620, 930
MalI	GATC	4 cut(s)	93, 345, 741, 1223
MboI	GATC	4 cut(s)	91, 343, 739, 1221
MboII	GAAGA	5 cut(s)	542, 863, 917, 1394, 1403
MflI	RGATCY	1 cut(s)	91
MhlI	GDGCHC	3 cut(s)	82, 693, 1440
MlyI	GAGTC	1 cut(s)	848
MseI	TTAA	2 cut(s)	452, 1202
MslI	CAYNNNNRTG	2 cut(s)	880, 1487
MspI	CCGG	3 cut(s)	106, 113, 648
Mva1269I	GAATGC	1 cut(s)	1177
MwoI	GCNNNNNNNGC	5 cut(s)	174, 280, 800, 1598, 1655
NcoI	CCATGG	1 cut(s)	1374
NdeI	CATATG	1 cut(s)	1471
NdeII	GATC	4 cut(s)	91, 343, 739, 1221
NlaIV	GGNNCC	8 cut(s)	692, 818, 819, 841, 1124, 1368, 1438, 1439
NmuCI	GTSAC	2 cut(s)	27, 108
NspI	RCATGY	4 cut(s)	325, 478, 1164, 1334
OliI	CACNNNNGTG	1 cut(s)	880
PaeR7I	CTCGAG	1 cut(s)	75
PciI	ACATGT	2 cut(s)	474, 1160
PctI	GAATGC	1 cut(s)	1177
PfeI	GAWTC	3 cut(s)	118, 584, 1129
PkrI	GCNGC	5 cut(s)	1509, 1537, 1594, 1694, 1712
PleI	GAGTC	1 cut(s)	848
PpsI	GAGTC	1 cut(s)	848
PpuMI	RGGWCCY	1 cut(s)	817
PscI	ACATGT	2 cut(s)	474, 1160
PshAI	GACNNNNGTC	1 cut(s)	298
Psp124BI	GAGCTC	1 cut(s)	82
Psp5II	RGGWCCY	1 cut(s)	817
PspEI	GGTNACC	1 cut(s)	108
PspN4I	GGNNCC	8 cut(s)	692, 818, 819, 841, 1124, 1368, 1438, 1439
PspOMI	GGGCCC	1 cut(s)	1436
PspPI	GGNCC	4 cut(s)	817, 1436, 1437, 1466
PspPPI	RGGWCCY	1 cut(s)	817
PspXI	VCTCGAGB	1 cut(s)	75
PstI	CTGCAG	3 cut(s)	393, 904, 1098
PstNI	CAGNNNCTG	1 cut(s)	467
PsuI	RGATCY	1 cut(s)	91
RsaI	GTAC	3 cut(s)	563, 866, 1061
RsaNI	GTAC	3 cut(s)	562, 865, 1060
RseI	CAYNNNNRTG	2 cut(s)	880, 1487
SacI	GAGCTC	1 cut(s)	82
SalI	GTCGAC	1 cut(s)	1051
SaqAI	TTAA	2 cut(s)	452, 1202
SatI	GCNGC	5 cut(s)	1508, 1536, 1593, 1693, 1711
Sau3AI	GATC	4 cut(s)	91, 343, 739, 1221
Sau96I	GGNCC	4 cut(s)	817, 1436, 1437, 1466
SchI	GAGTC	1 cut(s)	848
SduI	GDGCHC	3 cut(s)	82, 693, 1440
SfaNI	GCATC	7 cut(s)	390, 790, 929, 978, 1246, 1479, 1494
SfcI	CTRYAG	6 cut(s)	389, 423, 900, 980, 1094, 1310
Sfr274I	CTCGAG	1 cut(s)	75
SinI	GGWCC	1 cut(s)	817
SlaI	CTCGAG	1 cut(s)	75
SmiMI	CAYNNNNRTG	2 cut(s)	880, 1487
SmlI	CTYRAG	1 cut(s)	75
SmoI	CTYRAG	1 cut(s)	75
SsiI	CCGC	5 cut(s)	13, 43, 1383, 1592, 1692
SspI	AATATT	1 cut(s)	336
SspMI	CTAG	2 cut(s)	1016, 1433
SstI	GAGCTC	1 cut(s)	82
StyI	CCWWGG	2 cut(s)	1335, 1374
TaaI	ACNGT	5 cut(s)	362, 749, 966, 984, 1314
TaiI	ACGT	3 cut(s)	417, 655, 1625
TaqI	TCGA	4 cut(s)	76, 1052, 1086, 1268
TaqII	GACCGA	1 cut(s)	1070
TatI	WGTACW	2 cut(s)	561, 1059
TauI	GCSGC	2 cut(s)	1595, 1695
TfiI	GAWTC	3 cut(s)	118, 584, 1129
Tru1I	TTAA	2 cut(s)	452, 1202
Tru9I	TTAA	2 cut(s)	452, 1202
TscAI	CASTG	8 cut(s)	398, 508, 638, 887, 971, 1536, 1645, 1665
TseFI	GTSAC	2 cut(s)	27, 108
TseI	GCWGC	3 cut(s)	1507, 1535, 1710
Tsp45I	GTSAC	2 cut(s)	27, 108
TspDTI	ATGAA	8 cut(s)	221, 512, 1019, 1050, 1116, 1121, 1184, 1227
TspGWI	ACGGA	1 cut(s)	1437
TspRI	CASTG	8 cut(s)	398, 508, 638, 887, 971, 1536, 1645, 1665
VpaK11BI	GGWCC	1 cut(s)	817
XapI	RAATTY	6 cut(s)	68, 806, 1007, 1074, 1585, 1612
XceI	RCATGY	4 cut(s)	325, 478, 1164, 1334
XhoI	CTCGAG	1 cut(s)	75
XmiI	GTMKAC	2 cut(s)	357, 1052
XspI	CTAG	2 cut(s)	1016, 1433

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.