Lysine-specific histone
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD04G1223600.v1.1 |
| rosa_chinensis | RchiOBHm_Chr5g0055881 RchiOBHm_Chr6g0282731 |
| rosa_laevigata | RLG00000022750 RLG00000034781 RLG00000035016 |
| rosa_roxburghii | Rroxscaffold_7G00190100 |
| rosa_rugosa | Rorug05G0166400 |
| rosa_samantha | Rh5CG400100 Rh5CG459400 Rh6DG190400 Rh6DG256700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 271 |
| AccIII | TCCGGA | 1 cut(s) | 159 |
| AciI | CCGC | 2 cut(s) | 37, 59 |
| AfaI | GTAC | 2 cut(s) | 41, 259 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 54, 271 |
| AgsI | TTSAA | 3 cut(s) | 10, 121, 184 |
| AjnI | CCWGG | 1 cut(s) | 270 |
| Alw26I | GTCTC | 1 cut(s) | 162 |
| Aor13HI | TCCGGA | 1 cut(s) | 159 |
| AseI | ATTAAT | 1 cut(s) | 237 |
| AspLEI | GCGC | 1 cut(s) | 126 |
| AspS9I | GGNCC | 1 cut(s) | 274 |
| AsuHPI | GGTGA | 1 cut(s) | 148 |
| AvaII | GGWCC | 1 cut(s) | 274 |
| BaeGI | GKGCMC | 1 cut(s) | 31 |
| BccI | CCATC | 1 cut(s) | 164 |
| BceAI | ACGGC | 1 cut(s) | 111 |
| BciT130I | CCWGG | 1 cut(s) | 272 |
| BciVI | GTATCC | 1 cut(s) | 156 |
| BcoDI | GTCTC | 1 cut(s) | 162 |
| BfaI | CTAG | 2 cut(s) | 227, 312 |
| BfuI | GTATCC | 1 cut(s) | 156 |
| Bme1390I | CCNGG | 1 cut(s) | 272 |
| Bme18I | GGWCC | 1 cut(s) | 274 |
| BmgT120I | GGNCC | 1 cut(s) | 274 |
| BmiI | GGNNCC | 1 cut(s) | 276 |
| BmrFI | CCNGG | 1 cut(s) | 272 |
| BmrI | ACTGGG | 2 cut(s) | 41, 63 |
| BmsI | GCATC | 1 cut(s) | 70 |
| BmuI | ACTGGG | 2 cut(s) | 41, 63 |
| BsaWI | WCCGGW | 1 cut(s) | 159 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 54, 271 |
| Bse1I | ACTGG | 2 cut(s) | 36, 58 |
| BseAI | TCCGGA | 1 cut(s) | 159 |
| BseBI | CCWGG | 1 cut(s) | 272 |
| BseGI | GGATG | 2 cut(s) | 156, 171 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 54, 271 |
| BseMII | CTCAG | 2 cut(s) | 96, 279 |
| BseNI | ACTGG | 2 cut(s) | 36, 58 |
| BseSI | GKGCMC | 1 cut(s) | 31 |
| BsiSI | CCGG | 1 cut(s) | 160 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 54, 271 |
| BsmAI | GTCTC | 1 cut(s) | 162 |
| Bsp1286I | GDGCHC | 1 cut(s) | 31 |
| Bsp13I | TCCGGA | 1 cut(s) | 159 |
| BspACI | CCGC | 2 cut(s) | 37, 59 |
| BspCNI | CTCAG | 2 cut(s) | 97, 280 |
| BspEI | TCCGGA | 1 cut(s) | 159 |
| BspLI | GGNNCC | 1 cut(s) | 276 |
| BsrI | ACTGG | 2 cut(s) | 36, 58 |
| Bst2UI | CCWGG | 1 cut(s) | 272 |
| BstC8I | GCNNGC | 1 cut(s) | 72 |
| BstDEI | CTNAG | 3 cut(s) | 21, 105, 288 |
| BstF5I | GGATG | 2 cut(s) | 156, 171 |
| BstHHI | GCGC | 1 cut(s) | 126 |
| BstMAI | GTCTC | 1 cut(s) | 162 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 80, 89 |
| BstNI | CCWGG | 1 cut(s) | 272 |
| BstSCI | CCNGG | 1 cut(s) | 270 |
| BstSLI | GKGCMC | 1 cut(s) | 31 |
| BsuI | GTATCC | 1 cut(s) | 156 |
| BtsCI | GGATG | 2 cut(s) | 156, 171 |
| BtsIMutI | CAGTG | 3 cut(s) | 29, 75, 201 |
| Cac8I | GCNNGC | 1 cut(s) | 72 |
| CfoI | GCGC | 1 cut(s) | 126 |
| Cfr13I | GGNCC | 1 cut(s) | 274 |
| Csp6I | GTAC | 2 cut(s) | 40, 258 |
| CviAII | CATG | 1 cut(s) | 64 |
| CviJI | RGCY | 3 cut(s) | 74, 98, 293 |
| CviKI_1 | RGCY | 3 cut(s) | 74, 98, 293 |
| CviQI | GTAC | 2 cut(s) | 40, 258 |
| DdeI | CTNAG | 3 cut(s) | 21, 105, 288 |
| Eco47I | GGWCC | 1 cut(s) | 274 |
| EcoRII | CCWGG | 1 cut(s) | 270 |
| FaeI | CATG | 1 cut(s) | 67 |
| FaiI | YATR | 8 cut(s) | 65, 197, 199, 215, 222, 251, 300, 307 |
| FatI | CATG | 1 cut(s) | 63 |
| FokI | GGATG | 2 cut(s) | 143, 158 |
| FspBI | CTAG | 2 cut(s) | 227, 312 |
| GlaI | GCGC | 1 cut(s) | 125 |
| HapII | CCGG | 1 cut(s) | 160 |
| HhaI | GCGC | 1 cut(s) | 126 |
| Hin1II | CATG | 1 cut(s) | 67 |
| Hin6I | GCGC | 1 cut(s) | 124 |
| HinP1I | GCGC | 1 cut(s) | 124 |
| HpaII | CCGG | 1 cut(s) | 160 |
| HphI | GGTGA | 1 cut(s) | 148 |
| Hpy188I | TCNGA | 2 cut(s) | 106, 289 |
| Hpy188III | TCNNGA | 4 cut(s) | 113, 160, 227, 312 |
| HpyCH4V | TGCA | 2 cut(s) | 83, 192 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 80, 89 |
| HpyF3I | CTNAG | 3 cut(s) | 21, 105, 288 |
| Hsp92II | CATG | 1 cut(s) | 67 |
| HspAI | GCGC | 1 cut(s) | 124 |
| Kpn2I | TCCGGA | 1 cut(s) | 159 |
| LmnI | GCTCC | 1 cut(s) | 67 |
| LpnPI | CCDG | 8 cut(s) | 17, 39, 112, 173, 188, 257, 284, 291 |
| LweI | GCATC | 1 cut(s) | 70 |
| MaeI | CTAG | 2 cut(s) | 227, 312 |
| MaeIII | GTNAC | 1 cut(s) | 142 |
| MhlI | GDGCHC | 1 cut(s) | 31 |
| MnlI | CCTC | 2 cut(s) | 18, 283 |
| MroI | TCCGGA | 1 cut(s) | 159 |
| MseI | TTAA | 3 cut(s) | 14, 237, 322 |
| MspI | CCGG | 1 cut(s) | 160 |
| MspR9I | CCNGG | 1 cut(s) | 272 |
| MvaI | CCWGG | 1 cut(s) | 272 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 80, 89 |
| NlaIII | CATG | 1 cut(s) | 67 |
| NlaIV | GGNNCC | 1 cut(s) | 276 |
| NmuCI | GTSAC | 1 cut(s) | 142 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 271 |
| PfoI | TCCNGGA | 1 cut(s) | 270 |
| PshBI | ATTAAT | 1 cut(s) | 237 |
| Psp6I | CCWGG | 1 cut(s) | 270 |
| PspGI | CCWGG | 1 cut(s) | 270 |
| PspN4I | GGNNCC | 1 cut(s) | 276 |
| PspPI | GGNCC | 1 cut(s) | 274 |
| RsaI | GTAC | 2 cut(s) | 41, 259 |
| RsaNI | GTAC | 2 cut(s) | 40, 258 |
| SaqAI | TTAA | 3 cut(s) | 14, 237, 322 |
| Sau96I | GGNCC | 1 cut(s) | 274 |
| ScrFI | CCNGG | 1 cut(s) | 272 |
| SduI | GDGCHC | 1 cut(s) | 31 |
| SetI | ASST | 2 cut(s) | 22, 138 |
| SfaNI | GCATC | 1 cut(s) | 70 |
| SinI | GGWCC | 1 cut(s) | 274 |
| SsiI | CCGC | 2 cut(s) | 37, 59 |
| SspMI | CTAG | 2 cut(s) | 227, 312 |
| StyD4I | CCNGG | 1 cut(s) | 270 |
| Tru1I | TTAA | 3 cut(s) | 14, 237, 322 |
| Tru9I | TTAA | 3 cut(s) | 14, 237, 322 |
| TscAI | CASTG | 3 cut(s) | 36, 82, 208 |
| TseFI | GTSAC | 1 cut(s) | 142 |
| Tsp45I | GTSAC | 1 cut(s) | 142 |
| TspRI | CASTG | 3 cut(s) | 36, 82, 208 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 271 |
| VpaK11BI | GGWCC | 1 cut(s) | 274 |
| VspI | ATTAAT | 1 cut(s) | 237 |
| XbaI | TCTAGA | 2 cut(s) | 226, 311 |
| XspI | CTAG | 2 cut(s) | 227, 312 |