Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr7

Orthogroup ID

OG0013053

Physical Location & Seq

Genomic Coordinates Reverse (-)

71128348 .. 71130057

Gene Structure 1710 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000035742

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1710 bp

ATGTCACCAACGAACGAAGCTCTTGTCCTCATCCAAAAAATGGTGAAAAGCCCGCCACTGAAAGCCTTGTCAATCTTCAACTCCTCAACTCTCCTCCAAGGCTTCCACCACACCCACCACTCCATCTCCTTCATTCTTCACAACCTCATCTCCTCCAATATGCCAATGCACGCCCAGTCTCTTGTTCTTCAACTCCTCTCCGGTCGAATCTCATCCCCATTCTTCACTCCCTCGTCTCTCCTCCACGATTTAACTCAACCCAGGTTGAGCTCAGTCCCCACCTCTGGTCATCTATACGAAGCAATCATCAGCGCCCACGTTCAATCTCAGTTGCCAGAGCAAGCCCTTTACTATTTCAACAAAATGGTTGAGCAAGGACTCGTTCCCAGATCAAACACTTTCAACAACGTATTGGGTTTCCTTGTAAAGTCGAGAGATTTTGAAAAGGCTTGGTGGGTGTTTAATGAGTTTAAAGGCAAGGTGGGATTGGATTTGTATAGTTTTGGGATAGTTATAAAAAGTTGCTGCGAGGGTAGTGATTTGGATAGGGGGTTTGGAGTTTTGGATGAGATGGAGAAAATGGGTTGGTCTCCGAATGTGGTTATATACACTACATTGATTGATGGGTGTTGCAAGAATGGTGATTTAGAGAGGGCAAAGAAGATGTTTTGTAAAATGGGGGAGCTTGGTTTGGTTGCTAATCAGTTTACGTATACTGTGTTGATTGATGGGCTTTTCAAGAAAGGTCGGTATATAGAAGGGTTTGAGTTGTATGAGAAGATGAAGAGTAATGGGGTTGTTCCTAACATGCGTACTTTTACTTGTTTGATCAGTGGGTGTTGCAATGACGGAAAAATGAATACTGCCTTGAAACTATTCGATGAAATGCGTGAGAGAGGAATGGCCTGCAATGTGGTCACATACAACATCCTAATTGGTGGGTTGTGTCGAGAAATGAGGGTTTGGGAAGCTGAGAAGTTTGTGAATGAGATGAAGAGGGATGGTATTAGTCCAAGTATAGTTACTTTCAACACTCTGATTGATGGGTTTTGTGGTCTTGGAAGGTTGGACAAGGCGTTGAGTTTGTTTGATCAGTTGAAGTCGAGTGGAGAATCTCCGTCTCTGGTGACTTATAATGTTCTGATTCAAGGCTTTGCCAAAGCTCGAAACTCTGCTGGAGTTATTGATTTGGTGAGACAGATGGAGAACAGAGGCATGTCTCCTTCTAAAGTGACATATACAATTGTAATTGATGCCTTGGTTCGATCCGATGACATGGAAAGAGCATTTCATGTGTTCTCCTCCATGGAGAAGGCTGGTCTGGTGCCTGATGTCTACACCTATGGGGTCTTAATACATGGGTTATGCATGAAAGGTAATATGATTGAAGCATCAAATCTGTTGCAATCAATGAGCGATTCACATTTGGAGCCAAGTGATGTCATATTTAATATAATGATTCATGGCTACTGCAAAGAGGGTAGCTCTTACAGGGCACTGAGGTTGCTCAAAGAAATGAGAAAGAAGGGAATGGTTCCGAATGTGGCTAGTTACAGTTCGACCATTGGAGTTCTTTGTAATGATGGGAAATGGGAAGAAGCTGAAATACTACTTAAAGAAATGACGGACTCAGATTCCAAACCATCAGTTTCTTTGTATAATATAATTTCTAGAGTGAAAAATGGTACACCGGTGAAGTTATCAACCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0001101 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0016070 GO:0016071 GO:0016556 GO:0016787 GO:0016788 GO:0033993 GO:0034641 GO:0042221 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0046483 GO:0050896 GO:0071704 GO:0080156 GO:0090304 GO:0090305 GO:0097159 GO:0097305 GO:1900864 GO:1901360 GO:1901363 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3 PPR_long

Protein Analysis

570

Amino Acids

63.46

Weight (kDa)

8.09

Isoelectric Point (pI)

42.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_long	PF17177	161 - 285	1.1e-07	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	187 - 243	5.1e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	195 - 226	2.7e-12	PPR repeat
PPR_2	PF13041	198 - 247	5.9e-17	PPR repeat family
PPR	PF01535	201 - 231	2.3e-09	PPR repeat
PPR_long	PF17177	206 - 318	2.7e-08	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	230 - 262	3.4e-06	PPR repeat
PPR_2	PF13041	234 - 282	8.5e-16	PPR repeat family
PPR	PF01535	236 - 266	7.3e-08	PPR repeat
PPR_3	PF13812	257 - 313	1.2e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	264 - 297	3.2e-12	PPR repeat
TPR_24	PF23276	272 - 365	2.8e-06	Fungal tetratrico peptide repeats
PPR_2	PF13041	272 - 317	4.5e-18	PPR repeat family
PPR	PF01535	272 - 300	7.3e-09	PPR repeat
PPR_1	PF12854	299 - 332	1.2e-12	PPR repeat
PPR_2	PF13041	304 - 351	1.2e-17	PPR repeat family
PPR	PF01535	306 - 336	6e-08	PPR repeat
PPR_3	PF13812	328 - 385	1.5e-11	Pentatricopeptide repeat domain
PPR_1	PF12854	334 - 366	1.1e-11	PPR repeat
PPR_2	PF13041	338 - 387	1.6e-16	PPR repeat family
PPR	PF01535	341 - 370	5.5e-08	PPR repeat
PPR_long	PF17177	358 - 482	3.8e-10	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	373 - 422	4.5e-13	PPR repeat family
TPR_24	PF23276	396 - 462	1e-05	Fungal tetratrico peptide repeats
PPR_3	PF13812	397 - 453	5.3e-09	Pentatricopeptide repeat domain
PPR	PF01535	411 - 441	1e-05	PPR repeat
PPR_2	PF13041	411 - 456	2e-15	PPR repeat family
PPR_3	PF13812	436 - 490	4e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	440 - 471	4.9e-09	PPR repeat
PPR_3	PF13812	467 - 525	7.6e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	476 - 507	1.9e-08	PPR repeat
PPR_2	PF13041	478 - 527	4.3e-14	PPR repeat family
PPR	PF01535	481 - 510	3.4e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0013053)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11690 AT4G11690
fragaria_vesca	FvH4_3g36170
malus_domestica	MD03G1092900.v1.1
prunus_persica	Prupe.6G076800_v2.0.a1
pyrus_communis	pycom03g07420
rosa_chinensis	RchiOBHm_Chr5g0064671 RchiOBHm_Chr5g0064911
rosa_laevigata	RLG00000035740 RLG00000035742
rosa_multiflora	Rmu_sc0020903.1_g000003 Rmu_sc0025431.1_g000001
rosa_roxburghii	Rroxscaffold_1G00016400
rosa_rugosa	Rorug05G0366600
rosa_samantha	Rh5AG425100 Rh5CG462600 Rh5DG453100
rosa_wichuraiana	Rw5G039940

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	515, 1134
AccB1I	GGYRCC	1 cut(s)	1324
AccB7I	CCANNNNNTGG	1 cut(s)	40
AccI	GTMKAC	2 cut(s)	713, 1335
AciI	CCGC	1 cut(s)	53
AclWI	GGATC	1 cut(s)	1260
AfaI	GTAC	2 cut(s)	814, 1687
AfiI	CCNNNNNNNGG	2 cut(s)	40, 284
AgeI	ACCGGT	1 cut(s)	1690
AjnI	CCWGG	1 cut(s)	260
AluBI	AGCT	7 cut(s)	20, 270, 685, 971, 1163, 1485, 1601
AluI	AGCT	7 cut(s)	20, 270, 685, 971, 1163, 1485, 1601
Alw21I	GWGCWC	1 cut(s)	272
Alw26I	GTCTC	6 cut(s)	183, 240, 594, 1125, 1189, 1224
AlwI	GGATC	1 cut(s)	1260
AoxI	GGCC	1 cut(s)	903
ApeKI	GCWGC	1 cut(s)	525
ArsI	GACNNNNNNTTYG	2 cut(s)	9, 41
AsiGI	ACCGGT	1 cut(s)	1690
Asp700I	GAANNNNTTC	1 cut(s)	875
AspLEI	GCGC	1 cut(s)	314
AsuHPI	GGTGA	5 cut(s)	55, 653, 1138, 1204, 1705
BaeGI	GKGCMC	1 cut(s)	1498
BaeI	ACNNNNGTAYC	2 cut(s)	1677, 1710
BanI	GGYRCC	1 cut(s)	1324
BanII	GRGCYC	1 cut(s)	272
BarI	GAAGNNNNNNTAC	2 cut(s)	1590, 1622
Bbv12I	GWGCWC	1 cut(s)	272
BbvI	GCAGC	1 cut(s)	512
BccI	CCATC	9 cut(s)	131, 565, 617, 722, 995, 1037, 1195, 1577, 1651
BciT130I	CCWGG	1 cut(s)	262
BclI	TGATCA	2 cut(s)	828, 1090
BcoDI	GTCTC	6 cut(s)	183, 240, 594, 1125, 1189, 1224
BfaI	CTAG	2 cut(s)	1548, 1671
BfoI	RGCGCY	1 cut(s)	315
BisI	GCNGC	1 cut(s)	526
BlsI	GCNGC	1 cut(s)	527
Bme1390I	CCNGG	1 cut(s)	262
BmiI	GGNNCC	3 cut(s)	1326, 1431, 1536
BmrFI	CCNGG	1 cut(s)	262
BmrI	ACTGGG	1 cut(s)	169
BmsI	GCATC	2 cut(s)	1243, 1400
BmuI	ACTGGG	1 cut(s)	169
BplI	GAGNNNNNCTC	2 cut(s)	1469, 1501
BpmI	CTGGAG	1 cut(s)	1197
BsaAI	YACGTR	1 cut(s)	711
BsaI	GGTCTC	1 cut(s)	594
BsaJI	CCNNGG	4 cut(s)	97, 260, 1257, 1305
BsaWI	WCCGGW	2 cut(s)	200, 1690
BsaXI	ACNNNNNCTCC	4 cut(s)	110, 134, 140, 164
Bsc4I	CCNNNNNNNGG	2 cut(s)	40, 284
Bse118I	RCCGGY	1 cut(s)	1690
Bse1I	ACTGG	1 cut(s)	175
Bse3DI	GCAATG	2 cut(s)	850, 916
BseBI	CCWGG	1 cut(s)	262
BseDI	CCNNGG	4 cut(s)	97, 260, 1257, 1305
BseGI	GGATG	5 cut(s)	30, 212, 571, 927, 1006
BseLI	CCNNNNNNNGG	2 cut(s)	40, 284
BseMI	GCAATG	2 cut(s)	850, 916
BseMII	CTCAG	5 cut(s)	285, 341, 963, 1490, 1644
BseNI	ACTGG	1 cut(s)	175
BseRI	GAGGAG	6 cut(s)	73, 83, 142, 185, 230, 1291
BseSI	GKGCMC	1 cut(s)	1498
BseXI	GCAGC	1 cut(s)	512
Bsh1285I	CGRYCG	1 cut(s)	205
BshFI	GGCC	1 cut(s)	905
BshNI	GGYRCC	1 cut(s)	1324
BshTI	ACCGGT	1 cut(s)	1690
BsiEI	CGRYCG	1 cut(s)	205
BsiHKAI	GWGCWC	1 cut(s)	272
BsiSI	CCGG	2 cut(s)	201, 1691
BslFI	GGGAC	1 cut(s)	260
BslI	CCNNNNNNNGG	2 cut(s)	40, 284
BsmAI	GTCTC	6 cut(s)	183, 240, 594, 1125, 1189, 1224
BsmBI	CGTCTC	2 cut(s)	240, 1125
BsmFI	GGGAC	1 cut(s)	260
BsnI	GGCC	1 cut(s)	905
Bso31I	GGTCTC	1 cut(s)	594
Bsp1286I	GDGCHC	2 cut(s)	272, 1498
Bsp143I	GATC	4 cut(s)	389, 828, 1090, 1265
Bsp19I	CCATGG	1 cut(s)	1305
BspACI	CCGC	1 cut(s)	53
BspANI	GGCC	1 cut(s)	905
BspCNI	CTCAG	5 cut(s)	284, 340, 964, 1491, 1643
BspLI	GGNNCC	3 cut(s)	1326, 1431, 1536
BspPI	GGATC	1 cut(s)	1260
BspT107I	GGYRCC	1 cut(s)	1324
BspTNI	GGTCTC	1 cut(s)	594
BsrDI	GCAATG	2 cut(s)	850, 916
BsrFI	RCCGGY	1 cut(s)	1690
BsrI	ACTGG	1 cut(s)	175
BssAI	RCCGGY	1 cut(s)	1690
BssECI	CCNNGG	4 cut(s)	97, 260, 1257, 1305
BssMI	GATC	4 cut(s)	389, 828, 1090, 1265
BssNAI	GTATAC	1 cut(s)	714
BssT1I	CCWWGG	3 cut(s)	97, 1257, 1305
Bst1107I	GTATAC	1 cut(s)	714
Bst2UI	CCWGG	1 cut(s)	262
Bst4CI	ACNGT	2 cut(s)	718, 1556
Bst6I	CTCTTC	2 cut(s)	779, 989
BstBAI	YACGTR	1 cut(s)	711
BstC8I	GCNNGC	4 cut(s)	53, 171, 342, 907
BstDEI	CTNAG	5 cut(s)	271, 327, 972, 1499, 1630
BstDSI	CCRYGG	1 cut(s)	1305
BstF5I	GGATG	5 cut(s)	30, 212, 571, 927, 1006
BstH2I	RGCGCY	1 cut(s)	315
BstHHI	GCGC	1 cut(s)	314
BstKTI	GATC	4 cut(s)	392, 831, 1093, 1268
BstMAI	GTCTC	6 cut(s)	183, 240, 594, 1125, 1189, 1224
BstMBI	GATC	4 cut(s)	389, 828, 1090, 1265
BstMCI	CGRYCG	1 cut(s)	205
BstNI	CCWGG	1 cut(s)	262
BstNSI	RCATGY	2 cut(s)	811, 1219
BstSCI	CCNGG	1 cut(s)	260
BstSLI	GKGCMC	1 cut(s)	1498
BstSNI	TACGTA	1 cut(s)	711
BstV1I	GCAGC	1 cut(s)	512
BstZ17I	GTATAC	1 cut(s)	714
BsuRI	GGCC	1 cut(s)	905
BtgI	CCRYGG	1 cut(s)	1305
BtsCI	GGATG	5 cut(s)	30, 212, 571, 927, 1006
BtsIMutI	CAGTG	3 cut(s)	56, 838, 1496
Cac8I	GCNNGC	4 cut(s)	53, 171, 342, 907
CfoI	GCGC	1 cut(s)	314
Cfr10I	RCCGGY	1 cut(s)	1690
Csp6I	GTAC	2 cut(s)	813, 1686
CspAI	ACCGGT	1 cut(s)	1690
CviAII	CATG	8 cut(s)	808, 1216, 1276, 1292, 1306, 1358, 1369, 1463
CviQI	GTAC	2 cut(s)	813, 1686
DdeI	CTNAG	5 cut(s)	271, 327, 972, 1499, 1630
DpnI	GATC	4 cut(s)	391, 830, 1092, 1267
DpnII	GATC	4 cut(s)	389, 828, 1090, 1265
DraI	TTTAAA	1 cut(s)	472
Eam1104I	CTCTTC	2 cut(s)	779, 989
EarI	CTCTTC	2 cut(s)	779, 989
Ecl136II	GAGCTC	1 cut(s)	270
Eco105I	TACGTA	1 cut(s)	711
Eco130I	CCWWGG	3 cut(s)	97, 1257, 1305
Eco24I	GRGCYC	1 cut(s)	272
Eco31I	GGTCTC	1 cut(s)	594
Eco53kI	GAGCTC	1 cut(s)	270
EcoICRI	GAGCTC	1 cut(s)	270
EcoRII	CCWGG	1 cut(s)	260
EcoT14I	CCWWGG	3 cut(s)	97, 1257, 1305
EcoT22I	ATGCAT	1 cut(s)	1370
EcoT38I	GRGCYC	1 cut(s)	272
ErhI	CCWWGG	3 cut(s)	97, 1257, 1305
Esp3I	CGTCTC	2 cut(s)	240, 1125
FaeI	CATG	8 cut(s)	811, 1219, 1279, 1295, 1309, 1361, 1372, 1466
FaqI	GGGAC	1 cut(s)	260
FatI	CATG	8 cut(s)	807, 1215, 1275, 1291, 1305, 1357, 1368, 1462
FauI	CCCGC	1 cut(s)	60
FbaI	TGATCA	2 cut(s)	828, 1090
FblI	GTMKAC	2 cut(s)	713, 1335
Fnu4HI	GCNGC	1 cut(s)	526
FokI	GGATG	5 cut(s)	17, 199, 578, 914, 1013
FriOI	GRGCYC	1 cut(s)	272
Fsp4HI	GCNGC	1 cut(s)	526
FspBI	CTAG	2 cut(s)	1548, 1671
GlaI	GCGC	1 cut(s)	313
GluI	GCNGC	1 cut(s)	526
GsuI	CTGGAG	1 cut(s)	1197
HaeII	RGCGCY	1 cut(s)	315
HaeIII	GGCC	1 cut(s)	905
HapII	CCGG	2 cut(s)	201, 1691
HhaI	GCGC	1 cut(s)	314
Hin1II	CATG	8 cut(s)	811, 1219, 1279, 1295, 1309, 1361, 1372, 1466
Hin6I	GCGC	1 cut(s)	312
HinP1I	GCGC	1 cut(s)	312
HinfI	GANTC	8 cut(s)	207, 378, 1112, 1144, 1418, 1459, 1628, 1634
HpaII	CCGG	2 cut(s)	201, 1691
HphI	GGTGA	5 cut(s)	55, 653, 1138, 1204, 1705
Hpy166II	GTNNAC	4 cut(s)	708, 714, 1336, 1688
Hpy188I	TCNGA	6 cut(s)	594, 1038, 1143, 1270, 1539, 1633
Hpy188III	TCNNGA	4 cut(s)	432, 739, 950, 1671
Hpy8I	GTNNAC	4 cut(s)	708, 714, 1336, 1688
HpyAV	CCTTC	6 cut(s)	139, 752, 1056, 1233, 1306, 1519
HpyCH4III	ACNGT	2 cut(s)	718, 1556
HpyCH4IV	ACGT	3 cut(s)	318, 408, 710
HpyCH4V	TGCA	7 cut(s)	169, 633, 843, 909, 1368, 1405, 1473
HpyF3I	CTNAG	5 cut(s)	271, 327, 972, 1499, 1630
HpySE526I	ACGT	3 cut(s)	318, 408, 710
Hsp92II	CATG	8 cut(s)	811, 1219, 1279, 1295, 1309, 1361, 1372, 1466
HspAI	GCGC	1 cut(s)	312
Ksp22I	TGATCA	2 cut(s)	828, 1090
Kzo9I	GATC	4 cut(s)	389, 828, 1090, 1265
LmnI	GCTCC	2 cut(s)	682, 1429
Lsp1109I	GCAGC	1 cut(s)	512
LweI	GCATC	2 cut(s)	1243, 1400
MaeI	CTAG	2 cut(s)	1548, 1671
MaeII	ACGT	3 cut(s)	318, 408, 710
MaeIII	GTNAC	6 cut(s)	3, 916, 1021, 1126, 1231, 1550
MalI	GATC	4 cut(s)	391, 830, 1092, 1267
MboI	GATC	4 cut(s)	389, 828, 1090, 1265
MboII	GAAGA	9 cut(s)	67, 128, 179, 214, 673, 790, 796, 1006, 1607
MfeI	CAATTG	1 cut(s)	1242
MhlI	GDGCHC	2 cut(s)	272, 1498
MluCI	AATT	4 cut(s)	933, 1242, 1248, 1665
MlyI	GAGTC	2 cut(s)	372, 1622
MmeI	TCCRAC	1 cut(s)	1047
Mph1103I	ATGCAT	1 cut(s)	1370
MroXI	GAANNNNTTC	1 cut(s)	875
MseI	TTAA	6 cut(s)	251, 462, 471, 1352, 1449, 1614
MspI	CCGG	2 cut(s)	201, 1691
MspR9I	CCNGG	1 cut(s)	262
MunI	CAATTG	1 cut(s)	1242
MvaI	CCWGG	1 cut(s)	262
NcoI	CCATGG	1 cut(s)	1305
NdeII	GATC	4 cut(s)	389, 828, 1090, 1265
NlaIII	CATG	8 cut(s)	811, 1219, 1279, 1295, 1309, 1361, 1372, 1466
NlaIV	GGNNCC	3 cut(s)	1326, 1431, 1536
NmuCI	GTSAC	4 cut(s)	3, 916, 1126, 1231
NsiI	ATGCAT	1 cut(s)	1370
NspI	RCATGY	2 cut(s)	811, 1219
PdmI	GAANNNNTTC	1 cut(s)	875
PfeI	GAWTC	6 cut(s)	207, 1112, 1144, 1418, 1459, 1634
PflMI	CCANNNNNTGG	1 cut(s)	40
PinAI	ACCGGT	1 cut(s)	1690
PkrI	GCNGC	1 cut(s)	527
PleI	GAGTC	2 cut(s)	372, 1622
PpsI	GAGTC	2 cut(s)	372, 1622
Ppu21I	YACGTR	1 cut(s)	711
PsiI	TTATAA	2 cut(s)	515, 1134
Psp124BI	GAGCTC	1 cut(s)	272
Psp6I	CCWGG	1 cut(s)	260
PspGI	CCWGG	1 cut(s)	260
PspN4I	GGNNCC	3 cut(s)	1326, 1431, 1536
RsaI	GTAC	2 cut(s)	814, 1687
RsaNI	GTAC	2 cut(s)	813, 1686
SacI	GAGCTC	1 cut(s)	272
SaqAI	TTAA	6 cut(s)	251, 462, 471, 1352, 1449, 1614
SatI	GCNGC	1 cut(s)	526
Sau3AI	GATC	4 cut(s)	389, 828, 1090, 1265
SchI	GAGTC	2 cut(s)	372, 1622
ScrFI	CCNGG	1 cut(s)	262
SduI	GDGCHC	2 cut(s)	272, 1498
SfaNI	GCATC	2 cut(s)	1243, 1400
SgrAI	CRCCGGYG	1 cut(s)	1690
SnaBI	TACGTA	1 cut(s)	711
Sse9I	AATT	4 cut(s)	933, 1242, 1248, 1665
SsiI	CCGC	1 cut(s)	53
SspMI	CTAG	2 cut(s)	1548, 1671
SstI	GAGCTC	1 cut(s)	272
StyD4I	CCNGG	1 cut(s)	260
StyI	CCWWGG	3 cut(s)	97, 1257, 1305
TaaI	ACNGT	2 cut(s)	718, 1556
TaiI	ACGT	3 cut(s)	321, 411, 713
TaqI	TCGA	8 cut(s)	205, 431, 879, 949, 1103, 1165, 1264, 1559
TasI	AATT	4 cut(s)	933, 1242, 1248, 1665
TfiI	GAWTC	6 cut(s)	207, 1112, 1144, 1418, 1459, 1634
Tru1I	TTAA	6 cut(s)	251, 462, 471, 1352, 1449, 1614
Tru9I	TTAA	6 cut(s)	251, 462, 471, 1352, 1449, 1614
TscAI	CASTG	3 cut(s)	63, 838, 1503
TseFI	GTSAC	4 cut(s)	3, 916, 1126, 1231
TseI	GCWGC	1 cut(s)	525
Tsp45I	GTSAC	4 cut(s)	3, 916, 1126, 1231
TspDTI	ATGAA	8 cut(s)	121, 797, 872, 897, 1007, 1280, 1385, 1451
TspGWI	ACGGA	3 cut(s)	864, 1107, 1640
TspRI	CASTG	3 cut(s)	63, 838, 1503
Van91I	CCANNNNNTGG	1 cut(s)	40
XbaI	TCTAGA	1 cut(s)	1670
XceI	RCATGY	2 cut(s)	811, 1219
XmiI	GTMKAC	2 cut(s)	713, 1335
XmnI	GAANNNNTTC	1 cut(s)	875
XspI	CTAG	2 cut(s)	1548, 1671
Zsp2I	ATGCAT	1 cut(s)	1370

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.