RLG00000036102

Phosphoinositide phospholipase C

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
75752304 .. 75758060
5757 bp
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UTR
Exon/CDS
Intron
RLM00000036102

Sequence Viewer

Length: 1629 bp
ATGGCCAACATTAATAAACAGTCTTTCAAGGTCTGCTGCTGTTTCGAAAGAATATTCCGGTTCAAGGCGGCAGAGCCGCCTGAAGATATCAAGAAAATTTTTGATAAGTACGCCGAAAATAGCATCATGTCCCTTGATGGCCTTCGCAGATTTCTGGTTGAGTTTCAAGGAGAAAGTGAGGCCACCAAAGAAGATGCTCAGGCCATTTTCAACAGTCTCAAGCATCTCAACATGTTCCACAGAAAGGGCCTCCATTTTGATGCCTTCTTTCGATATCTCTTTGGTGATCTTAACCCTCCAATTTTTTCAGAGGTGAATCATAACATGAAAGCTCCATTGGCTCATTATTTCCTATACACTGGCCATAACTCATACCTGACTGGAAATCAACTCAGCAGTAACAGTAGTGTCAAGCCAATTATCGAGGCACTGCAACGAGGTGTTCGAGTTATTGAATTAGATTTGTGGCCTAATTCTAAAAAGAATGGCGTCGCGGTTCTTCATGGAGGGACTTTGACTCGTCCTGTTGAACTCATCAAATGCTTGCGTGCTATTAAGGACAATGCTTTTACTGCCTCTGAATATCCTGTTGTTATTACATTTGAAGACCACTTAACTTCACCTCTTCAAGCTAAAGTGGCCAAGATGGTGACTGAAACATTTGGAGACATGCTTTACGTCCCTGACTCGGAATTTTTAATGGAATTCTCTTCACCTGAAATGTTAAAGAGAAAGATTTTGATCTCAACCAAGCCACCAGAGCATAATGAACGTCAGAGGCGCAAGGACTCTGAAGCCACTGATAAGGATAGTGACGAAGATGATCGGAATGAAGATGAGGAGAATGCTGATCTACAATATAAGCAGTTAATTGCAATCCATGCTGGAAAACCGAAAGGGGGGTTGGATATGTTGCATATTGATCCCAAGAAAGTCAGACGTCTTAGCTTGAGCGAGCAACAACTCGAACGTGCATCAAAAACTCGTGGAACAGATATTGTTAGGTTTACACAACGAAACTTGTTAAGGATATATCCCAAGGGTACACGTGTGGACTCGTCAAATTATGACCCTATGCTTGGATGGAGCCATGGAGCTCAGATGGTCGCATTCAATATGCAAGGACATGATAAGCACCTTCATATTATGGAAGGAATGTTCAGAGCTAATGGAGGTTGTGGTTATGTGAAAAAACCTAAATTTTTACTTACCGATAGTCCAGATAATGAGGTTTTTAATCCTGAAAAATCGTACCGAGTTAGGCAAATCTTGAAGGTAAAAGTTTTCATGGGTGAAGGATGGCATTCAGATTTCCACCGCACACACTTTGATCTTTTCTCTCCACCGGACTTTTTTGTGAGGGGCCTCAGTATCCATATACACCACCGTTCTCACAATCCCATCCCCTTCGAACCTTTCATCACCAAGATCAAGCGCCGCCACGAGTATCGCAAATGGGAGAATTTGCACTTAGATCGAGACTCCGCCCCCACCCCCGAGTTCCAACCCGAGTGGAAGGATTTCATGGAGAACTTCAATATCACCAATAGGTCGTTGGCCTTGTTGTTCCCCAAGATTGATGTTGACCCAGTCGATGGCTGTATTAGCAAGCATGAGTTGACTCATTAG
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

543

Amino Acids

62.82

Weight (kDa)

8.08

Isoelectric Point (pI)

46.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI-PLC-X PF00388 109 - 251 8.5e-51 Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y PF00387 315 - 401 3.3e-30 Phosphatidylinositol-specific phospholipase C, Y domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 943
AccB7I CCANNNNNTGG 1 cut(s) 1595
AccII CGCG 1 cut(s) 494
AciI CCGC 6 cut(s) 68, 77, 494, 1318, 1438, 1485
AclWI GGATC 1 cut(s) 917
AcoI YGGCCR 3 cut(s) 3, 361, 639
AcsI RAATTY 5 cut(s) 96, 692, 704, 1199, 1462
AcuI CTGAAG 2 cut(s) 102, 813
AcvI CACGTG 1 cut(s) 1049
AcyI GRCGYC 2 cut(s) 489, 940
AfaI GTAC 3 cut(s) 110, 1045, 1253
AfiI CCNNNNNNNGG 6 cut(s) 64, 244, 688, 899, 1079, 1595
AflIII ACRYGT 3 cut(s) 231, 1046, 1048
AjuI GAANNNNNNNTTGG 4 cut(s) 320, 352, 887, 919
AloI GAACNNNNNNTCC 2 cut(s) 1142, 1174
AluBI AGCT 5 cut(s) 332, 632, 948, 1097, 1166
AluI AGCT 5 cut(s) 332, 632, 948, 1097, 1166
Alw21I GWGCWC 1 cut(s) 1099
Alw26I GTCTC 3 cut(s) 221, 660, 1473
AlwI GGATC 1 cut(s) 917
Ama87I CYCGRG 2 cut(s) 1496, 1508
ApeKI GCWGC 1 cut(s) 36
ApoI RAATTY 5 cut(s) 96, 692, 704, 1199, 1462
AseI ATTAAT 1 cut(s) 12
Asp700I GAANNNNTTC 1 cut(s) 1520
AspLEI GCGC 2 cut(s) 783, 1437
AspS9I GGNCC 2 cut(s) 247, 1363
AsuHPI GGTGA 8 cut(s) 296, 325, 612, 661, 705, 1304, 1414, 1534
AsuII TTCGAA 2 cut(s) 45, 1410
AvaI CYCGRG 2 cut(s) 1496, 1508
BaeI ACNNNNGTAYC 2 cut(s) 1035, 1068
BalI TGGCCA 3 cut(s) 5, 363, 641
BanII GRGCYC 1 cut(s) 1099
BauI CACGAG 2 cut(s) 984, 1442
BbrPI CACGTG 1 cut(s) 1049
BbsI GAAGAC 1 cut(s) 612
Bbv12I GWGCWC 1 cut(s) 1099
BbvI GCAGC 1 cut(s) 23
BccI CCATC 7 cut(s) 131, 640, 1077, 1096, 1293, 1409, 1589
BcgI CGANNNNNNTGC 2 cut(s) 1457, 1491
BciVI GTATCC 1 cut(s) 1382
BcoDI GTCTC 3 cut(s) 221, 660, 1473
BfoI RGCGCY 1 cut(s) 1438
BfuI GTATCC 1 cut(s) 1382
BisI GCNGC 4 cut(s) 37, 69, 77, 1438
BlsI GCNGC 4 cut(s) 38, 70, 78, 1439
BmeT110I CYCGRG 2 cut(s) 1496, 1508
BmgT120I GGNCC 2 cut(s) 247, 1363
BmiI GGNNCC 2 cut(s) 1088, 1364
BmrI ACTGGG 1 cut(s) 1583
BmsI GCATC 5 cut(s) 132, 184, 232, 250, 983
BmuI ACTGGG 1 cut(s) 1583
BpiI GAAGAC 1 cut(s) 612
Bpu10I CCTNAGC 1 cut(s) 198
Bpu14I TTCGAA 2 cut(s) 45, 1410
BpuEI CTTGAG 2 cut(s) 203, 970
BsaAI YACGTR 1 cut(s) 1049
BsaBI GATNNNNATC 1 cut(s) 740
BsaHI GRCGYC 2 cut(s) 489, 940
BsaJI CCNNGG 2 cut(s) 1038, 1090
BsaWI WCCGGW 2 cut(s) 57, 1345
Bsc4I CCNNNNNNNGG 6 cut(s) 64, 244, 688, 899, 1079, 1595
Bse1I ACTGG 3 cut(s) 364, 385, 1589
Bse8I GATNNNNATC 1 cut(s) 740
BseDI CCNNGG 2 cut(s) 1038, 1090
BseGI GGATG 3 cut(s) 1088, 1304, 1401
BseJI GATNNNNATC 1 cut(s) 740
BseLI CCNNNNNNNGG 6 cut(s) 64, 244, 688, 899, 1079, 1595
BseMII CTCAG 4 cut(s) 212, 406, 1112, 1381
BseNI ACTGG 3 cut(s) 364, 385, 1589
BseRI GAGGAG 1 cut(s) 854
BseXI GCAGC 1 cut(s) 23
Bsh1236I CGCG 1 cut(s) 494
BsiHKAI GWGCWC 1 cut(s) 1099
BsiHKCI CYCGRG 2 cut(s) 1496, 1508
BsiSI CCGG 2 cut(s) 58, 1346
BslFI GGGAC 3 cut(s) 115, 523, 665
BslI CCNNNNNNNGG 6 cut(s) 64, 244, 688, 899, 1079, 1595
BsmAI GTCTC 3 cut(s) 221, 660, 1473
BsmFI GGGAC 3 cut(s) 115, 523, 665
BsmI GAATGC 3 cut(s) 850, 1109, 1303
BsoBI CYCGRG 2 cut(s) 1496, 1508
Bsp119I TTCGAA 2 cut(s) 45, 1410
Bsp1286I GDGCHC 1 cut(s) 1099
Bsp143I GATC 8 cut(s) 286, 741, 823, 850, 922, 1330, 1428, 1474
Bsp19I CCATGG 1 cut(s) 1090
BspACI CCGC 6 cut(s) 68, 77, 494, 1318, 1438, 1485
BspCNI CTCAG 4 cut(s) 211, 405, 1111, 1380
BspFNI CGCG 1 cut(s) 494
BspLI GGNNCC 2 cut(s) 1088, 1364
BspPI GGATC 1 cut(s) 917
BspT104I TTCGAA 2 cut(s) 45, 1410
BsrI ACTGG 3 cut(s) 364, 385, 1589
BssECI CCNNGG 2 cut(s) 1038, 1090
BssMI GATC 8 cut(s) 286, 741, 823, 850, 922, 1330, 1428, 1474
BssNI GRCGYC 2 cut(s) 489, 940
BssSI CACGAG 2 cut(s) 984, 1442
BssT1I CCWWGG 2 cut(s) 1038, 1090
Bst2BI CACGAG 2 cut(s) 984, 1442
Bst4CI ACNGT 4 cut(s) 21, 215, 404, 1388
Bst6I CTCTTC 2 cut(s) 630, 715
BstACI GRCGYC 2 cut(s) 489, 940
BstAPI GCANNNNNTGC 1 cut(s) 881
BstBAI YACGTR 1 cut(s) 1049
BstBI TTCGAA 2 cut(s) 45, 1410
BstC8I GCNNGC 4 cut(s) 545, 549, 956, 1610
BstDEI CTNAG 6 cut(s) 198, 392, 944, 1098, 1367, 1471
BstDSI CCRYGG 1 cut(s) 1090
BstF5I GGATG 3 cut(s) 1088, 1304, 1401
BstFNI CGCG 1 cut(s) 494
BstH2I RGCGCY 1 cut(s) 1438
BstHHI GCGC 2 cut(s) 783, 1437
BstKTI GATC 8 cut(s) 289, 744, 826, 853, 925, 1333, 1431, 1477
BstMAI GTCTC 3 cut(s) 221, 660, 1473
BstMBI GATC 8 cut(s) 286, 741, 823, 850, 922, 1330, 1428, 1474
BstMWI GCNNNNNNNGC 6 cut(s) 338, 572, 638, 760, 881, 1605
BstNSI RCATGY 2 cut(s) 235, 673
BstUI CGCG 1 cut(s) 494
BstV1I GCAGC 1 cut(s) 23
BstV2I GAAGAC 1 cut(s) 612
BsuI GTATCC 1 cut(s) 1382
BtgI CCRYGG 1 cut(s) 1090
BtsCI GGATG 3 cut(s) 1088, 1304, 1401
BtsI GCAGTG 1 cut(s) 428
BtsIMutI CAGTG 3 cut(s) 357, 428, 798
Cac8I GCNNGC 4 cut(s) 545, 549, 956, 1610
CfoI GCGC 2 cut(s) 783, 1437
Cfr13I GGNCC 2 cut(s) 247, 1363
CseI GACGC 1 cut(s) 478
Csp6I GTAC 3 cut(s) 109, 1044, 1252
CspCI CAANNNNNGTGG 2 cut(s) 1493, 1528
CviQI GTAC 3 cut(s) 109, 1044, 1252
DdeI CTNAG 6 cut(s) 198, 392, 944, 1098, 1367, 1471
DpnI GATC 8 cut(s) 288, 743, 825, 852, 924, 1332, 1430, 1476
DpnII GATC 8 cut(s) 286, 741, 823, 850, 922, 1330, 1428, 1474
EaeI YGGCCR 3 cut(s) 3, 361, 639
Eam1104I CTCTTC 2 cut(s) 630, 715
EarI CTCTTC 2 cut(s) 630, 715
EciI GGCGGA 1 cut(s) 1474
Ecl136II GAGCTC 1 cut(s) 1097
Eco130I CCWWGG 2 cut(s) 1038, 1090
Eco24I GRGCYC 1 cut(s) 1099
Eco32I GATATC 2 cut(s) 88, 275
Eco53kI GAGCTC 1 cut(s) 1097
Eco57I CTGAAG 2 cut(s) 102, 813
Eco72I CACGTG 1 cut(s) 1049
Eco88I CYCGRG 2 cut(s) 1496, 1508
EcoICRI GAGCTC 1 cut(s) 1097
EcoO109I RGGNCCY 2 cut(s) 247, 1363
EcoRI GAATTC 1 cut(s) 704
EcoRV GATATC 2 cut(s) 88, 275
EcoT14I CCWWGG 2 cut(s) 1038, 1090
EcoT38I GRGCYC 1 cut(s) 1099
ErhI CCWWGG 2 cut(s) 1038, 1090
FaqI GGGAC 3 cut(s) 115, 523, 665
Fnu4HI GCNGC 4 cut(s) 37, 69, 77, 1438
FokI GGATG 3 cut(s) 1095, 1311, 1388
FriOI GRGCYC 1 cut(s) 1099
Fsp4HI GCNGC 4 cut(s) 37, 69, 77, 1438
GlaI GCGC 2 cut(s) 782, 1436
GluI GCNGC 4 cut(s) 37, 69, 77, 1438
HaeII RGCGCY 1 cut(s) 1438
HapII CCGG 2 cut(s) 58, 1346
HgaI GACGC 1 cut(s) 478
HhaI GCGC 2 cut(s) 783, 1437
Hin1I GRCGYC 2 cut(s) 489, 940
Hin6I GCGC 2 cut(s) 781, 1435
HinP1I GCGC 2 cut(s) 781, 1435
HincII GTYRAC 2 cut(s) 1585, 1620
HindII GTYRAC 2 cut(s) 1585, 1620
HinfI GANTC 7 cut(s) 316, 517, 686, 788, 1055, 1481, 1621
HpaII CCGG 2 cut(s) 58, 1346
HphI GGTGA 8 cut(s) 296, 325, 612, 661, 705, 1304, 1414, 1534
Hpy166II GTNNAC 5 cut(s) 1008, 1046, 1054, 1585, 1620
Hpy188III TCNNGA 5 cut(s) 91, 1220, 1241, 1270, 1478
Hpy8I GTNNAC 5 cut(s) 1008, 1046, 1054, 1585, 1620
Hpy99I CGWCG 1 cut(s) 494
HpyAV CCTTC 8 cut(s) 152, 274, 1145, 1148, 1267, 1289, 1417, 1510
HpyCH4III ACNGT 4 cut(s) 21, 215, 404, 1388
HpyCH4IV ACGT 5 cut(s) 678, 772, 940, 970, 1048
HpyCH4V TGCA 6 cut(s) 433, 875, 916, 974, 1120, 1468
HpyF10VI GCNNNNNNNGC 6 cut(s) 338, 572, 638, 760, 881, 1605
HpyF3I CTNAG 6 cut(s) 198, 392, 944, 1098, 1367, 1471
HpySE526I ACGT 5 cut(s) 678, 772, 940, 970, 1048
Hsp92I GRCGYC 2 cut(s) 489, 940
HspAI GCGC 2 cut(s) 781, 1435
Kzo9I GATC 8 cut(s) 286, 741, 823, 850, 922, 1330, 1428, 1474
LmnI GCTCC 3 cut(s) 337, 1086, 1094
Lsp1109I GCAGC 1 cut(s) 23
LweI GCATC 5 cut(s) 132, 184, 232, 250, 983
MaeII ACGT 5 cut(s) 678, 772, 940, 970, 1048
MaeIII GTNAC 3 cut(s) 398, 649, 812
MalI GATC 8 cut(s) 288, 743, 825, 852, 924, 1332, 1430, 1476
MboI GATC 8 cut(s) 286, 741, 823, 850, 922, 1330, 1428, 1474
MboII GAAGA 8 cut(s) 95, 203, 491, 617, 617, 702, 830, 845
MhlI GDGCHC 1 cut(s) 1099
MlsI TGGCCA 3 cut(s) 5, 363, 641
MluNI TGGCCA 3 cut(s) 5, 363, 641
MlyI GAGTC 6 cut(s) 511, 680, 782, 1049, 1475, 1615
MmeI TCCRAC 2 cut(s) 885, 1528
Mox20I TGGCCA 3 cut(s) 5, 363, 641
MroXI GAANNNNTTC 1 cut(s) 1520
MscI TGGCCA 3 cut(s) 5, 363, 641
MseI TTAA 9 cut(s) 12, 291, 555, 614, 698, 725, 869, 1025, 1236
MslI CAYNNNNRTG 1 cut(s) 258
Msp20I TGGCCA 3 cut(s) 5, 363, 641
MspI CCGG 2 cut(s) 58, 1346
Mva1269I GAATGC 3 cut(s) 850, 1109, 1303
MvnI CGCG 1 cut(s) 494
MwoI GCNNNNNNNGC 6 cut(s) 338, 572, 638, 760, 881, 1605
NcoI CCATGG 1 cut(s) 1090
NdeII GATC 8 cut(s) 286, 741, 823, 850, 922, 1330, 1428, 1474
NlaIV GGNNCC 2 cut(s) 1088, 1364
NmuCI GTSAC 2 cut(s) 649, 812
NspI RCATGY 2 cut(s) 235, 673
NspV TTCGAA 2 cut(s) 45, 1410
PciI ACATGT 1 cut(s) 231
PcsI WCGNNNNNNNCGW 1 cut(s) 442
PctI GAATGC 3 cut(s) 850, 1109, 1303
PdmI GAANNNNTTC 1 cut(s) 1520
PfeI GAWTC 1 cut(s) 316
PflFI GACNNNGTC 1 cut(s) 1589
PflMI CCANNNNNTGG 1 cut(s) 1595
PkrI GCNGC 4 cut(s) 38, 70, 78, 1439
PleI GAGTC 6 cut(s) 511, 680, 782, 1049, 1475, 1615
PmaCI CACGTG 1 cut(s) 1049
PmlI CACGTG 1 cut(s) 1049
PpsI GAGTC 6 cut(s) 511, 680, 782, 1049, 1475, 1615
Ppu21I YACGTR 1 cut(s) 1049
PscI ACATGT 1 cut(s) 231
PshBI ATTAAT 1 cut(s) 12
Psp124BI GAGCTC 1 cut(s) 1099
PspCI CACGTG 1 cut(s) 1049
PspN4I GGNNCC 2 cut(s) 1088, 1364
PspPI GGNCC 2 cut(s) 247, 1363
PsyI GACNNNGTC 1 cut(s) 1589
RsaI GTAC 3 cut(s) 110, 1045, 1253
RsaNI GTAC 3 cut(s) 109, 1044, 1252
RseI CAYNNNNRTG 1 cut(s) 258
SacI GAGCTC 1 cut(s) 1099
SaqAI TTAA 9 cut(s) 12, 291, 555, 614, 698, 725, 869, 1025, 1236
SatI GCNGC 4 cut(s) 37, 69, 77, 1438
Sau3AI GATC 8 cut(s) 286, 741, 823, 850, 922, 1330, 1428, 1474
Sau96I GGNCC 2 cut(s) 247, 1363
SchI GAGTC 6 cut(s) 511, 680, 782, 1049, 1475, 1615
SduI GDGCHC 1 cut(s) 1099
SfaNI GCATC 5 cut(s) 132, 184, 232, 250, 983
SfuI TTCGAA 2 cut(s) 45, 1410
SmiMI CAYNNNNRTG 1 cut(s) 258
SmlI CTYRAG 2 cut(s) 218, 949
SmoI CTYRAG 2 cut(s) 218, 949
SsiI CCGC 6 cut(s) 68, 77, 494, 1318, 1438, 1485
SspI AATATT 1 cut(s) 54
SstI GAGCTC 1 cut(s) 1099
StyI CCWWGG 2 cut(s) 1038, 1090
TaaI ACNGT 4 cut(s) 21, 215, 404, 1388
TaiI ACGT 5 cut(s) 681, 775, 943, 973, 1051
TaqI TCGA 8 cut(s) 45, 271, 423, 445, 966, 1410, 1477, 1593
TauI GCSGC 3 cut(s) 71, 79, 1440
TfiI GAWTC 1 cut(s) 316
Tru1I TTAA 9 cut(s) 12, 291, 555, 614, 698, 725, 869, 1025, 1236
Tru9I TTAA 9 cut(s) 12, 291, 555, 614, 698, 725, 869, 1025, 1236
TscAI CASTG 3 cut(s) 364, 435, 805
TseFI GTSAC 2 cut(s) 649, 812
TseI GCWGC 1 cut(s) 36
Tsp45I GTSAC 2 cut(s) 649, 812
TspDTI ATGAA 8 cut(s) 341, 491, 783, 846, 1130, 1276, 1408, 1513
TspRI CASTG 3 cut(s) 364, 435, 805
Tth111I GACNNNGTC 1 cut(s) 1589
Van91I CCANNNNNTGG 1 cut(s) 1595
VspI ATTAAT 1 cut(s) 12
XapI RAATTY 5 cut(s) 96, 692, 704, 1199, 1462
XceI RCATGY 2 cut(s) 235, 673
XcmI CCANNNNNNNNNTGG 1 cut(s) 1552
XmnI GAANNNNTTC 1 cut(s) 1520
ZraI GACGTC 1 cut(s) 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.