Rh5BG476000

Phosphoinositide phospholipase C

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
Physical Location & Seq
Forward (+)
75762736 .. 75770191
7456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG476000.1

Sequence Viewer

Length: 1665 bp
ATGTCCACTAATAAGCAGTCTTTCAAGGTCTGCTTCTGTTTCAGAAGAATATTTAGGCTCAAGGTGGCAGAGCCTCCAGAAGATATCAAGAAAATGTTTGATATGTATGCCGAAAATGGTACCATCTCCCTCGATGACCTTCACAGCTTTCTGATTGAGTTTCAAGGAGAAGGTGAGGCCACCAAAGAAGATGCTCAGGCCATTTTCAACAGTCTCAAACATCTCAACATTTTTCAAAGAAAAGGCCTCCATCTTGATGCCTTCTTTCGATATCTCTTTGGTGATCTTAACCCTCCAATCTCTTCAAAGGTGCATCATGACATGAAAGCTCCACTGGCTCATTATTTCCTATACACCGGCCATAACTCATACCTGACTGGAAATCAACTCAGCAGTGACAGTAGTGTCTACCCAATCATCCAGGCCCTCCTACGAGGCGTTCGAGTTATTGAATTAGATTTGTGGCCTAATTCTAAAAAGAATGGTGTCGAGGTTCGTCATGGAGGGACTTTGACTAGTTCGGTTGATCTCATCAAATGCTTGCATGCTATTAAGGACAATGCTTTTACTGCTTCTGAATATCCTGTTGTTATAACATTTGAAGACCACTTAACTTCAGATCTTCAAGCTAAAGTGGCCAAGATGGTGACTGAAACATTTGGAGATATGCTCTACGTCCCTAACTCGGAATTTTTAATGGAATTCCCTTCACCTGAAATATTAAAGAGAAAGGTTTTGATTTCAACCAAGCCACCAGAGTATCATGAAACTCAGAGGTCTGGAGCCACTGATAAGGATAGTGACGAAGATGATCCAGAAGAAGATGAGGAGAATGCTACTCTACAATATAAGCAGTTAATTGCAATCCATGCTGGAAAACCGAAAGGGGGGTCAGCAGGAGGGTTAGATATGTGGCATATTGATCCCATGAAAGTCAGACGTCTTAGCTTGAGCGAGCAACAACTCGAACGTGCATCAAAAACTCGTGGAACAGATATTGTTAGGTTTACACAAAGAAATTTGTTAAGGATATATCCCAAGGGTACACGTTTGGACTCATCAAATTATGACCCTATGCTTGGATGGAGCCATGGAGCTCAGATGGTCGCATTCAATATGCAAGGACATGGAAAGCATCTTCATATTATGGAAGGAATGTTCAGAGCTAATGGAGGTTGTGGTTATGTGAAAAAACCTGATTTTTTACTTACCAGCGGTCCAGATAATGAGGTTTTCAATCCTGAAAAATGGTACCAAGTTAGGCAAATCTTGAAGGTAAAAGTTTACATGGGCGAAGGATGGCATTCAGATTTCCACCGCACACACTTTGATCTTTATTCTCCACCGGACTTTTTCGTGAGGGTTGGAATTGCTGGAGTCCCAAAGGACACAATAATGTTGGAGACCAAGCCGATCGAGGACGACTGGATTCCAGTGTGGAATGAGGAGTTCAGCTTCCCATTGAGTGTTCCAGAACTAGCTGTGCTTAGAGTTGACGTTAAAGAGTATGACAATTCCGGAAATCATGACTTTGGTGGCCAAACATGTCTGCCAATATCAGAGCTCAGAACTGGGTTCAGAGCAGTTCCTCTGCATAGTAAAAGAGGGGTAAGGTATAAATCTGTGAAGCTGCTTATGAAATTTGAGTTTGAAAGTCCTGAGTGA
Functional Annotation
Pfam Domains
Protein Families

Protein Analysis

554

Amino Acids

63.21

Weight (kDa)

6.21

Isoelectric Point (pI)

42.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PI-PLC-X PF00388 108 - 250 7.9e-51 Phosphatidylinositol-specific phospholipase C, X domain
PI-PLC-Y PF00387 315 - 401 3.5e-29 Phosphatidylinositol-specific phospholipase C, Y domain
C2 PF00168 423 - 524 4.1e-12 C2 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 593
AasI GACNNNNNNGTC 1 cut(s) 404
AatII GACGTC 1 cut(s) 943
Acc65I GGTACC 2 cut(s) 119, 1251
AccB1I GGYRCC 2 cut(s) 119, 1251
AccI GTMKAC 1 cut(s) 408
AccIII TCCGGA 1 cut(s) 1517
AciI CCGC 2 cut(s) 1215, 1318
AclWI GGATC 2 cut(s) 806, 917
AcoI YGGCCR 3 cut(s) 358, 636, 1537
AcsI RAATTY 4 cut(s) 689, 701, 1018, 1640
AcuI CTGAAG 1 cut(s) 600
AcyI GRCGYC 1 cut(s) 940
AfaI GTAC 3 cut(s) 121, 1045, 1253
AfiI CCNNNNNNNGG 3 cut(s) 685, 887, 1079
AflIII ACRYGT 2 cut(s) 1046, 1544
AhlI ACTAGT 1 cut(s) 515
AjnI CCWGG 1 cut(s) 420
AloI GAACNNNNNNTCC 2 cut(s) 1142, 1174
Alw21I GWGCWC 2 cut(s) 1099, 1566
Alw26I GTCTC 2 cut(s) 218, 1397
AlwI GGATC 2 cut(s) 806, 917
Aor13HI TCCGGA 1 cut(s) 1517
AoxI GGCC 8 cut(s) 177, 198, 244, 358, 423, 464, 636, 1537
ApeKI GCWGC 1 cut(s) 1630
ApoI RAATTY 4 cut(s) 689, 701, 1018, 1640
ArsI GACNNNNNNTTYG 2 cut(s) 875, 907
Asp718I GGTACC 2 cut(s) 119, 1251
AspS9I GGNCC 2 cut(s) 424, 1217
AsuHPI GGTGA 4 cut(s) 185, 293, 658, 702
AvaII GGWCC 1 cut(s) 1217
BaeI ACNNNNGTAYC 2 cut(s) 743, 776
BalI TGGCCA 2 cut(s) 638, 1539
BanI GGYRCC 2 cut(s) 119, 1251
BanII GRGCYC 2 cut(s) 1099, 1566
BauI CACGAG 1 cut(s) 984
BbsI GAAGAC 1 cut(s) 609
Bbv12I GWGCWC 2 cut(s) 1099, 1566
BbvI GCAGC 1 cut(s) 1617
BccI CCATC 6 cut(s) 131, 258, 637, 1077, 1096, 1293
BciT130I CCWGG 1 cut(s) 422
BcoDI GTCTC 2 cut(s) 218, 1397
BcuI ACTAGT 1 cut(s) 515
BfaI CTAG 2 cut(s) 516, 1478
BglII AGATCT 1 cut(s) 619
BisI GCNGC 1 cut(s) 1631
BlsI GCNGC 1 cut(s) 1632
Bme1390I CCNGG 1 cut(s) 422
Bme18I GGWCC 1 cut(s) 1217
BmgT120I GGNCC 2 cut(s) 424, 1217
BmiI GGNNCC 4 cut(s) 121, 784, 1088, 1253
BmrFI CCNGG 1 cut(s) 422
BmrI ACTGGG 1 cut(s) 1581
BmsI GCATC 5 cut(s) 181, 247, 322, 983, 1144
BmuI ACTGGG 1 cut(s) 1581
BpiI GAAGAC 1 cut(s) 609
BplI GAGNNNNNCTC 2 cut(s) 654, 686
BpmI CTGGAG 3 cut(s) 60, 801, 1395
Bpu10I CCTNAGC 1 cut(s) 195
BpuEI CTTGAG 2 cut(s) 44, 970
BsaHI GRCGYC 1 cut(s) 940
BsaI GGTCTC 1 cut(s) 1397
BsaJI CCNNGG 2 cut(s) 1038, 1090
BsaWI WCCGGW 2 cut(s) 1345, 1517
Bsc4I CCNNNNNNNGG 3 cut(s) 685, 887, 1079
Bse118I RCCGGY 1 cut(s) 356
Bse1I ACTGG 5 cut(s) 339, 382, 1430, 1433, 1576
BseAI TCCGGA 1 cut(s) 1517
BseBI CCWGG 1 cut(s) 422
BseDI CCNNGG 2 cut(s) 1038, 1090
BseGI GGATG 3 cut(s) 417, 1088, 1304
BseLI CCNNNNNNNGG 3 cut(s) 685, 887, 1079
BseMII CTCAG 6 cut(s) 209, 403, 785, 1112, 1579, 1650
BseNI ACTGG 5 cut(s) 339, 382, 1430, 1433, 1576
BseRI GAGGAG 2 cut(s) 842, 1460
BseXI GCAGC 1 cut(s) 1617
Bsh1285I CGRYCG 1 cut(s) 1416
BshFI GGCC 8 cut(s) 179, 200, 246, 360, 425, 466, 638, 1539
BshNI GGYRCC 2 cut(s) 119, 1251
BsiEI CGRYCG 1 cut(s) 1416
BsiHKAI GWGCWC 2 cut(s) 1099, 1566
BsiSI CCGG 3 cut(s) 357, 1346, 1518
BslFI GGGAC 3 cut(s) 520, 662, 1364
BslI CCNNNNNNNGG 3 cut(s) 685, 887, 1079
BsmAI GTCTC 2 cut(s) 218, 1397
BsmFI GGGAC 3 cut(s) 520, 662, 1364
BsmI GAATGC 3 cut(s) 838, 1109, 1303
BsnI GGCC 8 cut(s) 179, 200, 246, 360, 425, 466, 638, 1539
Bso31I GGTCTC 1 cut(s) 1397
Bsp1286I GDGCHC 2 cut(s) 1099, 1566
Bsp13I TCCGGA 1 cut(s) 1517
Bsp143I GATC 7 cut(s) 283, 526, 619, 811, 922, 1330, 1413
Bsp19I CCATGG 1 cut(s) 1090
BspACI CCGC 2 cut(s) 1215, 1318
BspANI GGCC 8 cut(s) 179, 200, 246, 360, 425, 466, 638, 1539
BspCNI CTCAG 6 cut(s) 208, 402, 784, 1111, 1578, 1651
BspEI TCCGGA 1 cut(s) 1517
BspHI TCATGA 3 cut(s) 316, 763, 1525
BspLI GGNNCC 4 cut(s) 121, 784, 1088, 1253
BspPI GGATC 2 cut(s) 806, 917
BspT107I GGYRCC 2 cut(s) 119, 1251
BspTNI GGTCTC 1 cut(s) 1397
BsrFI RCCGGY 1 cut(s) 356
BsrI ACTGG 5 cut(s) 339, 382, 1430, 1433, 1576
BssAI RCCGGY 1 cut(s) 356
BssECI CCNNGG 2 cut(s) 1038, 1090
BssMI GATC 7 cut(s) 283, 526, 619, 811, 922, 1330, 1413
BssNI GRCGYC 1 cut(s) 940
BssSI CACGAG 1 cut(s) 984
BssT1I CCWWGG 2 cut(s) 1038, 1090
Bst2BI CACGAG 1 cut(s) 984
Bst2UI CCWGG 1 cut(s) 422
Bst4CI ACNGT 2 cut(s) 212, 401
Bst6I CTCTTC 1 cut(s) 307
BstACI GRCGYC 1 cut(s) 940
BstAPI GCANNNNNTGC 1 cut(s) 869
BstC8I GCNNGC 3 cut(s) 542, 546, 956
BstDEI CTNAG 8 cut(s) 195, 389, 771, 944, 1098, 1487, 1565, 1659
BstDSI CCRYGG 1 cut(s) 1090
BstF5I GGATG 3 cut(s) 417, 1088, 1304
BstKTI GATC 7 cut(s) 286, 529, 622, 814, 925, 1333, 1416
BstMAI GTCTC 2 cut(s) 218, 1397
BstMBI GATC 7 cut(s) 283, 526, 619, 811, 922, 1330, 1413
BstMCI CGRYCG 1 cut(s) 1416
BstMWI GCNNNNNNNGC 4 cut(s) 335, 569, 635, 869
BstNI CCWGG 1 cut(s) 422
BstNSI RCATGY 2 cut(s) 548, 1548
BstSCI CCNGG 1 cut(s) 420
BstV1I GCAGC 1 cut(s) 1617
BstV2I GAAGAC 1 cut(s) 609
BstX2I RGATCY 1 cut(s) 619
BstYI RGATCY 1 cut(s) 619
BsuRI GGCC 8 cut(s) 179, 200, 246, 360, 425, 466, 638, 1539
BtgI CCRYGG 1 cut(s) 1090
BtsCI GGATG 3 cut(s) 417, 1088, 1304
BtsI GCAGTG 1 cut(s) 400
BtsIMutI CAGTG 4 cut(s) 332, 400, 786, 1440
Cac8I GCNNGC 3 cut(s) 542, 546, 956
CciI TCATGA 3 cut(s) 316, 763, 1525
Cfr10I RCCGGY 1 cut(s) 356
Cfr13I GGNCC 2 cut(s) 424, 1217
Csp6I GTAC 3 cut(s) 120, 1044, 1252
CviQI GTAC 3 cut(s) 120, 1044, 1252
DdeI CTNAG 8 cut(s) 195, 389, 771, 944, 1098, 1487, 1565, 1659
DpnI GATC 7 cut(s) 285, 528, 621, 813, 924, 1332, 1415
DpnII GATC 7 cut(s) 283, 526, 619, 811, 922, 1330, 1413
DrdI GACNNNNNNGTC 1 cut(s) 404
DseDI GACNNNNNNGTC 1 cut(s) 404
EaeI YGGCCR 3 cut(s) 358, 636, 1537
Eam1104I CTCTTC 1 cut(s) 307
EarI CTCTTC 1 cut(s) 307
Ecl136II GAGCTC 2 cut(s) 1097, 1564
Eco130I CCWWGG 2 cut(s) 1038, 1090
Eco147I AGGCCT 1 cut(s) 246
Eco24I GRGCYC 2 cut(s) 1099, 1566
Eco31I GGTCTC 1 cut(s) 1397
Eco32I GATATC 2 cut(s) 85, 272
Eco47I GGWCC 1 cut(s) 1217
Eco53kI GAGCTC 2 cut(s) 1097, 1564
Eco57I CTGAAG 1 cut(s) 600
EcoICRI GAGCTC 2 cut(s) 1097, 1564
EcoO109I RGGNCCY 1 cut(s) 424
EcoRI GAATTC 1 cut(s) 701
EcoRII CCWGG 1 cut(s) 420
EcoRV GATATC 2 cut(s) 85, 272
EcoT14I CCWWGG 2 cut(s) 1038, 1090
EcoT38I GRGCYC 2 cut(s) 1099, 1566
ErhI CCWWGG 2 cut(s) 1038, 1090
FalI AAGNNNNNCTT 2 cut(s) 17, 49
FaqI GGGAC 3 cut(s) 520, 662, 1364
FblI GTMKAC 1 cut(s) 408
Fnu4HI GCNGC 1 cut(s) 1631
FokI GGATG 3 cut(s) 404, 1095, 1311
FriOI GRGCYC 2 cut(s) 1099, 1566
Fsp4HI GCNGC 1 cut(s) 1631
FspBI CTAG 2 cut(s) 516, 1478
GluI GCNGC 1 cut(s) 1631
GsuI CTGGAG 3 cut(s) 60, 801, 1395
HaeIII GGCC 8 cut(s) 179, 200, 246, 360, 425, 466, 638, 1539
HapII CCGG 3 cut(s) 357, 1346, 1518
Hin1I GRCGYC 1 cut(s) 940
HincII GTYRAC 1 cut(s) 1495
HindII GTYRAC 1 cut(s) 1495
HinfI GANTC 3 cut(s) 1055, 1377, 1429
HpaII CCGG 3 cut(s) 357, 1346, 1518
HphI GGTGA 4 cut(s) 185, 293, 658, 702
Hpy166II GTNNAC 6 cut(s) 6, 409, 1008, 1046, 1285, 1495
Hpy8I GTNNAC 6 cut(s) 6, 409, 1008, 1046, 1285, 1495
HpyAV CCTTC 7 cut(s) 149, 164, 271, 717, 1145, 1267, 1289
HpyCH4III ACNGT 2 cut(s) 212, 401
HpyCH4IV ACGT 5 cut(s) 675, 940, 970, 1048, 1497
HpyCH4V TGCA 6 cut(s) 313, 544, 863, 974, 1120, 1594
HpyF10VI GCNNNNNNNGC 4 cut(s) 335, 569, 635, 869
HpyF3I CTNAG 8 cut(s) 195, 389, 771, 944, 1098, 1487, 1565, 1659
HpySE526I ACGT 5 cut(s) 675, 940, 970, 1048, 1497
Hsp92I GRCGYC 1 cut(s) 940
Kpn2I TCCGGA 1 cut(s) 1517
KpnI GGTACC 2 cut(s) 123, 1255
Kzo9I GATC 7 cut(s) 283, 526, 619, 811, 922, 1330, 1413
LmnI GCTCC 4 cut(s) 334, 782, 1086, 1094
Lsp1109I GCAGC 1 cut(s) 1617
LweI GCATC 5 cut(s) 181, 247, 322, 983, 1144
MaeI CTAG 2 cut(s) 516, 1478
MaeII ACGT 5 cut(s) 675, 940, 970, 1048, 1497
MaeIII GTNAC 3 cut(s) 395, 646, 800
MalI GATC 7 cut(s) 285, 528, 621, 813, 924, 1332, 1415
MboI GATC 7 cut(s) 283, 526, 619, 811, 922, 1330, 1413
MflI RGATCY 1 cut(s) 619
MhlI GDGCHC 2 cut(s) 1099, 1566
MlsI TGGCCA 2 cut(s) 638, 1539
MluNI TGGCCA 2 cut(s) 638, 1539
MlyI GAGTC 2 cut(s) 1049, 1386
MmeI TCCRAC 2 cut(s) 1345, 1380
Mox20I TGGCCA 2 cut(s) 638, 1539
MroI TCCGGA 1 cut(s) 1517
MscI TGGCCA 2 cut(s) 638, 1539
MseI TTAA 8 cut(s) 288, 552, 611, 695, 722, 857, 1025, 1500
MslI CAYNNNNRTG 2 cut(s) 255, 1394
Msp20I TGGCCA 2 cut(s) 638, 1539
MspA1I CMGCKG 1 cut(s) 1215
MspI CCGG 3 cut(s) 357, 1346, 1518
MspR9I CCNGG 1 cut(s) 422
Mva1269I GAATGC 3 cut(s) 838, 1109, 1303
MvaI CCWGG 1 cut(s) 422
MwoI GCNNNNNNNGC 4 cut(s) 335, 569, 635, 869
NcoI CCATGG 1 cut(s) 1090
NdeII GATC 7 cut(s) 283, 526, 619, 811, 922, 1330, 1413
NlaIV GGNNCC 4 cut(s) 121, 784, 1088, 1253
NmuCI GTSAC 3 cut(s) 395, 646, 800
NspI RCATGY 2 cut(s) 548, 1548
PaeI GCATGC 1 cut(s) 548
PagI TCATGA 3 cut(s) 316, 763, 1525
PceI AGGCCT 1 cut(s) 246
PciI ACATGT 1 cut(s) 1544
PcsI WCGNNNNNNNCGW 1 cut(s) 439
PctI GAATGC 3 cut(s) 838, 1109, 1303
PfeI GAWTC 1 cut(s) 1429
PkrI GCNGC 1 cut(s) 1632
Ple19I CGATCG 1 cut(s) 1416
PleI GAGTC 2 cut(s) 1049, 1385
PpsI GAGTC 2 cut(s) 1049, 1385
PscI ACATGT 1 cut(s) 1544
PsiI TTATAA 1 cut(s) 593
Psp124BI GAGCTC 2 cut(s) 1099, 1566
Psp6I CCWGG 1 cut(s) 420
PspGI CCWGG 1 cut(s) 420
PspN4I GGNNCC 4 cut(s) 121, 784, 1088, 1253
PspPI GGNCC 2 cut(s) 424, 1217
PsuI RGATCY 1 cut(s) 619
PvuI CGATCG 1 cut(s) 1416
RsaI GTAC 3 cut(s) 121, 1045, 1253
RsaNI GTAC 3 cut(s) 120, 1044, 1252
RseI CAYNNNNRTG 2 cut(s) 255, 1394
SacI GAGCTC 2 cut(s) 1099, 1566
SaqAI TTAA 8 cut(s) 288, 552, 611, 695, 722, 857, 1025, 1500
SatI GCNGC 1 cut(s) 1631
Sau3AI GATC 7 cut(s) 283, 526, 619, 811, 922, 1330, 1413
Sau96I GGNCC 2 cut(s) 424, 1217
SchI GAGTC 2 cut(s) 1049, 1386
ScrFI CCNGG 1 cut(s) 422
SduI GDGCHC 2 cut(s) 1099, 1566
SfaNI GCATC 5 cut(s) 181, 247, 322, 983, 1144
SinI GGWCC 1 cut(s) 1217
SmiMI CAYNNNNRTG 2 cut(s) 255, 1394
SmlI CTYRAG 2 cut(s) 59, 949
SmoI CTYRAG 2 cut(s) 59, 949
SpeI ACTAGT 1 cut(s) 515
SphI GCATGC 1 cut(s) 548
SseBI AGGCCT 1 cut(s) 246
SsiI CCGC 2 cut(s) 1215, 1318
SspI AATATT 2 cut(s) 51, 720
SspMI CTAG 2 cut(s) 516, 1478
SstI GAGCTC 2 cut(s) 1099, 1566
StuI AGGCCT 1 cut(s) 246
StyD4I CCNGG 1 cut(s) 420
StyI CCWWGG 2 cut(s) 1038, 1090
TaaI ACNGT 2 cut(s) 212, 401
TaiI ACGT 5 cut(s) 678, 943, 973, 1051, 1500
TaqI TCGA 6 cut(s) 132, 268, 442, 489, 966, 1416
TfiI GAWTC 1 cut(s) 1429
Tru1I TTAA 8 cut(s) 288, 552, 611, 695, 722, 857, 1025, 1500
Tru9I TTAA 8 cut(s) 288, 552, 611, 695, 722, 857, 1025, 1500
TscAI CASTG 4 cut(s) 339, 400, 793, 1440
TseFI GTSAC 3 cut(s) 395, 646, 800
TseI GCWGC 1 cut(s) 1630
Tsp45I GTSAC 3 cut(s) 395, 646, 800
TspDTI ATGAA 5 cut(s) 338, 780, 944, 1130, 1652
TspRI CASTG 4 cut(s) 339, 400, 793, 1440
VpaK11BI GGWCC 1 cut(s) 1217
XapI RAATTY 4 cut(s) 689, 701, 1018, 1640
XceI RCATGY 2 cut(s) 548, 1548
XmiI GTMKAC 1 cut(s) 408
XspI CTAG 2 cut(s) 516, 1478
ZraI GACGTC 1 cut(s) 941
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.