RLG00000036813

Acyl-coenzyme A thioesterase 9

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
84958390 .. 84966920
8531 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000036813

Sequence Viewer

Length: 324 bp
ATGTTCCACTCGCCGGTGACACAGGCACTGTGGGAAGTCACGTCTCTGATGTTCGAGAGGCTCTTGGACCCACCAGTAGACGCTCCTCCGCAGAGCCAATTGCTGAAGAAGACTCCATCACAGAGCAGGACTACAATTCCCTACAATTTCTCTACTGATTTTATACTGAGGGAGCAGTATGAGGATCCTTGGAATGAGGTCAGAATTGGGAAACTGCTTGAAGACCTTGATGATTTAACTGGAACCATTTTTGTTAAGGAACAAATATTCATAAACAATGTAAGGAAATCAGATTTGAACAGACAGAAAACTTCTAAATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

108

Amino Acids

12.56

Weight (kDa)

5.34

Isoelectric Point (pI)

44.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018167)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 78
AciI CCGC 1 cut(s) 89
AclWI GGATC 2 cut(s) 179, 192
AcuI CTGAAG 1 cut(s) 125
AfiI CCNNNNNNNGG 1 cut(s) 13
AgsI TTSAA 2 cut(s) 221, 298
AjiI CACGTC 1 cut(s) 42
Alw26I GTCTC 1 cut(s) 48
AlwI GGATC 2 cut(s) 179, 192
AlwNI CAGNNNCTG 1 cut(s) 28
AspS9I GGNCC 1 cut(s) 67
AsuHPI GGTGA 1 cut(s) 28
AvaII GGWCC 1 cut(s) 67
BamHI GGATCC 1 cut(s) 184
BbsI GAAGAC 2 cut(s) 116, 228
BccI CCATC 1 cut(s) 124
BcoDI GTCTC 1 cut(s) 48
Bme18I GGWCC 1 cut(s) 67
BmgBI CACGTC 1 cut(s) 42
BmgT120I GGNCC 1 cut(s) 67
BmiI GGNNCC 3 cut(s) 69, 186, 244
BpiI GAAGAC 2 cut(s) 116, 228
BsaJI CCNNGG 1 cut(s) 188
Bsc4I CCNNNNNNNGG 1 cut(s) 13
Bse118I RCCGGY 1 cut(s) 13
Bse1I ACTGG 2 cut(s) 74, 244
BseDI CCNNGG 1 cut(s) 188
BseLI CCNNNNNNNGG 1 cut(s) 13
BseMII CTCAG 1 cut(s) 158
BseNI ACTGG 2 cut(s) 74, 244
BseRI GAGGAG 1 cut(s) 75
BsiSI CCGG 1 cut(s) 14
BslI CCNNNNNNNGG 1 cut(s) 13
BsmAI GTCTC 1 cut(s) 48
BsmBI CGTCTC 1 cut(s) 48
Bsp143I GATC 1 cut(s) 184
BspACI CCGC 1 cut(s) 89
BspCNI CTCAG 1 cut(s) 159
BspLI GGNNCC 3 cut(s) 69, 186, 244
BspPI GGATC 2 cut(s) 179, 192
BsrFI RCCGGY 1 cut(s) 13
BsrI ACTGG 2 cut(s) 74, 244
BssAI RCCGGY 1 cut(s) 13
BssECI CCNNGG 1 cut(s) 188
BssMI GATC 1 cut(s) 184
BssT1I CCWWGG 1 cut(s) 188
Bst4CI ACNGT 1 cut(s) 30
BstDEI CTNAG 1 cut(s) 167
BstKTI GATC 1 cut(s) 187
BstMAI GTCTC 1 cut(s) 48
BstMBI GATC 1 cut(s) 184
BstV2I GAAGAC 2 cut(s) 116, 228
BstX2I RGATCY 1 cut(s) 184
BstYI RGATCY 1 cut(s) 184
BtrI CACGTC 1 cut(s) 42
BtsIMutI CAGTG 1 cut(s) 26
CaiI CAGNNNCTG 1 cut(s) 28
Cfr10I RCCGGY 1 cut(s) 13
Cfr13I GGNCC 1 cut(s) 67
CseI GACGC 1 cut(s) 89
CviJI RGCY 2 cut(s) 61, 96
CviKI_1 RGCY 2 cut(s) 61, 96
DdeI CTNAG 1 cut(s) 167
DpnI GATC 1 cut(s) 186
DpnII GATC 1 cut(s) 184
Eco130I CCWWGG 1 cut(s) 188
Eco47I GGWCC 1 cut(s) 67
Eco57I CTGAAG 1 cut(s) 125
EcoT14I CCWWGG 1 cut(s) 188
ErhI CCWWGG 1 cut(s) 188
Esp3I CGTCTC 1 cut(s) 48
FaiI YATR 3 cut(s) 164, 180, 272
FblI GTMKAC 1 cut(s) 78
HapII CCGG 1 cut(s) 14
HgaI GACGC 1 cut(s) 89
HinfI GANTC 1 cut(s) 112
HpaII CCGG 1 cut(s) 14
HphI GGTGA 1 cut(s) 28
Hpy166II GTNNAC 1 cut(s) 79
Hpy188I TCNGA 3 cut(s) 48, 203, 292
Hpy188III TCNNGA 1 cut(s) 55
Hpy8I GTNNAC 1 cut(s) 79
HpyCH4III ACNGT 1 cut(s) 30
HpyCH4IV ACGT 1 cut(s) 41
HpyF3I CTNAG 1 cut(s) 167
HpySE526I ACGT 1 cut(s) 41
Kzo9I GATC 1 cut(s) 184
LmnI GCTCC 2 cut(s) 88, 172
LpnPI CCDG 5 cut(s) 8, 27, 87, 112, 225
MaeII ACGT 1 cut(s) 41
MaeIII GTNAC 2 cut(s) 16, 37
MalI GATC 1 cut(s) 186
MboI GATC 1 cut(s) 184
MboII GAAGA 3 cut(s) 118, 121, 233
MfeI CAATTG 1 cut(s) 98
MflI RGATCY 1 cut(s) 184
MluCI AATT 4 cut(s) 98, 135, 145, 204
MlyI GAGTC 1 cut(s) 106
MnlI CCTC 5 cut(s) 51, 96, 162, 175, 190
MseI TTAA 2 cut(s) 236, 255
MspI CCGG 1 cut(s) 14
MunI CAATTG 1 cut(s) 98
NdeII GATC 1 cut(s) 184
NlaIV GGNNCC 3 cut(s) 69, 186, 244
NmuCI GTSAC 2 cut(s) 16, 37
PleI GAGTC 1 cut(s) 106
PpsI GAGTC 1 cut(s) 106
PspN4I GGNNCC 3 cut(s) 69, 186, 244
PspPI GGNCC 1 cut(s) 67
PstNI CAGNNNCTG 1 cut(s) 28
PsuI RGATCY 1 cut(s) 184
SaqAI TTAA 2 cut(s) 236, 255
Sau3AI GATC 1 cut(s) 184
Sau96I GGNCC 1 cut(s) 67
SchI GAGTC 1 cut(s) 106
SetI ASST 3 cut(s) 44, 201, 228
SgrAI CRCCGGYG 1 cut(s) 13
SinI GGWCC 1 cut(s) 67
Sse9I AATT 4 cut(s) 98, 135, 145, 204
SsiI CCGC 1 cut(s) 89
SspI AATATT 1 cut(s) 267
StyI CCWWGG 1 cut(s) 188
TaaI ACNGT 1 cut(s) 30
TaiI ACGT 1 cut(s) 44
TaqI TCGA 1 cut(s) 54
TasI AATT 4 cut(s) 98, 135, 145, 204
Tru1I TTAA 2 cut(s) 236, 255
Tru9I TTAA 2 cut(s) 236, 255
TscAI CASTG 1 cut(s) 33
TseFI GTSAC 2 cut(s) 16, 37
Tsp45I GTSAC 2 cut(s) 16, 37
TspDTI ATGAA 1 cut(s) 259
TspRI CASTG 1 cut(s) 33
VpaK11BI GGWCC 1 cut(s) 67
XmiI GTMKAC 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.