No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G74640 |
| fragaria_vesca | FvH4_5g14981 |
| malus_domestica | MD14G1199800.v1.1 |
| prunus_persica | Prupe.5G193100_v2.0.a1 |
| pyrus_communis | pycom14g16570 |
| rosa_chinensis | RchiOBHm_Chr7g0181351 |
| rosa_laevigata | RLG00000005196 |
| rosa_multiflora | Rmu_co8287351.1_g000001 Rmu_co8345699.1_g000001 Rmu_sc0013944.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00272110 |
| rosa_rugosa | Rorug06G0440400 |
| rosa_samantha | Rh7AG042400 Rh7BG041300 Rh7CG043700 Rh7DG042200 |
| rosa_wichuraiana | Rw7G003500 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 33 |
| AccI | GTMKAC | 1 cut(s) | 300 |
| AcsI | RAATTY | 2 cut(s) | 44, 290 |
| AfaI | GTAC | 1 cut(s) | 245 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 33, 239, 332 |
| AgsI | TTSAA | 2 cut(s) | 49, 155 |
| AjnI | CCWGG | 1 cut(s) | 232 |
| AluBI | AGCT | 1 cut(s) | 215 |
| AluI | AGCT | 1 cut(s) | 215 |
| AoxI | GGCC | 2 cut(s) | 230, 254 |
| ApoI | RAATTY | 2 cut(s) | 44, 290 |
| AspS9I | GGNCC | 2 cut(s) | 101, 323 |
| AvaII | GGWCC | 2 cut(s) | 101, 323 |
| BccI | CCATC | 4 cut(s) | 2, 256, 277, 314 |
| BciT130I | CCWGG | 1 cut(s) | 234 |
| BfaI | CTAG | 1 cut(s) | 239 |
| Bme1390I | CCNGG | 1 cut(s) | 234 |
| Bme18I | GGWCC | 2 cut(s) | 101, 323 |
| BmgT120I | GGNCC | 2 cut(s) | 101, 323 |
| BmiI | GGNNCC | 1 cut(s) | 102 |
| BmrFI | CCNGG | 1 cut(s) | 234 |
| Bpu10I | CCTNAGC | 1 cut(s) | 337 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 33, 239, 332 |
| Bse3DI | GCAATG | 1 cut(s) | 44 |
| BseBI | CCWGG | 1 cut(s) | 234 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 33, 239, 332 |
| BseMI | GCAATG | 1 cut(s) | 44 |
| BseRI | GAGGAG | 1 cut(s) | 92 |
| BshFI | GGCC | 2 cut(s) | 232, 256 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 33, 239, 332 |
| BsnI | GGCC | 2 cut(s) | 232, 256 |
| BspANI | GGCC | 2 cut(s) | 232, 256 |
| BspLI | GGNNCC | 1 cut(s) | 102 |
| BsrDI | GCAATG | 1 cut(s) | 44 |
| Bst2UI | CCWGG | 1 cut(s) | 234 |
| Bst4CI | ACNGT | 1 cut(s) | 151 |
| BstC8I | GCNNGC | 1 cut(s) | 213 |
| BstDEI | CTNAG | 2 cut(s) | 329, 337 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 237 |
| BstNI | CCWGG | 1 cut(s) | 234 |
| BstSCI | CCNGG | 1 cut(s) | 232 |
| BsuRI | GGCC | 2 cut(s) | 232, 256 |
| BtsI | GCAGTG | 2 cut(s) | 174, 270 |
| BtsIMutI | CAGTG | 2 cut(s) | 174, 270 |
| Cac8I | GCNNGC | 1 cut(s) | 213 |
| Cfr13I | GGNCC | 2 cut(s) | 101, 323 |
| Csp6I | GTAC | 1 cut(s) | 244 |
| CviJI | RGCY | 4 cut(s) | 215, 232, 256, 336 |
| CviKI_1 | RGCY | 4 cut(s) | 215, 232, 256, 336 |
| CviQI | GTAC | 1 cut(s) | 244 |
| DdeI | CTNAG | 2 cut(s) | 329, 337 |
| Eco47I | GGWCC | 2 cut(s) | 101, 323 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 237 |
| EcoO109I | RGGNCCY | 1 cut(s) | 101 |
| EcoRII | CCWGG | 1 cut(s) | 232 |
| FaiI | YATR | 5 cut(s) | 68, 70, 75, 84, 122 |
| FblI | GTMKAC | 1 cut(s) | 300 |
| FspBI | CTAG | 1 cut(s) | 239 |
| HaeIII | GGCC | 2 cut(s) | 232, 256 |
| HincII | GTYRAC | 1 cut(s) | 301 |
| HindII | GTYRAC | 1 cut(s) | 301 |
| Hpy166II | GTNNAC | 1 cut(s) | 301 |
| Hpy188I | TCNGA | 2 cut(s) | 139, 250 |
| Hpy8I | GTNNAC | 1 cut(s) | 301 |
| HpyCH4III | ACNGT | 1 cut(s) | 151 |
| HpyCH4V | TGCA | 1 cut(s) | 22 |
| HpyF3I | CTNAG | 2 cut(s) | 329, 337 |
| LpnPI | CCDG | 4 cut(s) | 219, 246, 281, 324 |
| MaeI | CTAG | 1 cut(s) | 239 |
| MboII | GAAGA | 1 cut(s) | 167 |
| MluCI | AATT | 5 cut(s) | 44, 55, 205, 290, 310 |
| MnlI | CCTC | 2 cut(s) | 70, 336 |
| MseI | TTAA | 3 cut(s) | 63, 204, 343 |
| MspR9I | CCNGG | 1 cut(s) | 234 |
| MvaI | CCWGG | 1 cut(s) | 234 |
| NlaIV | GGNNCC | 1 cut(s) | 102 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 33 |
| PpuMI | RGGWCCY | 1 cut(s) | 101 |
| Psp5II | RGGWCCY | 1 cut(s) | 101 |
| Psp6I | CCWGG | 1 cut(s) | 232 |
| PspGI | CCWGG | 1 cut(s) | 232 |
| PspN4I | GGNNCC | 1 cut(s) | 102 |
| PspPI | GGNCC | 2 cut(s) | 101, 323 |
| PspPPI | RGGWCCY | 1 cut(s) | 101 |
| RsaI | GTAC | 1 cut(s) | 245 |
| RsaNI | GTAC | 1 cut(s) | 244 |
| SalI | GTCGAC | 1 cut(s) | 299 |
| SaqAI | TTAA | 3 cut(s) | 63, 204, 343 |
| Sau96I | GGNCC | 2 cut(s) | 101, 323 |
| ScrFI | CCNGG | 1 cut(s) | 234 |
| SetI | ASST | 2 cut(s) | 217, 343 |
| SgeI | CNNG | 9 cut(s) | 61, 117, 186, 203, 224, 245, 246, 251, 308 |
| SinI | GGWCC | 2 cut(s) | 101, 323 |
| Sse9I | AATT | 5 cut(s) | 44, 55, 205, 290, 310 |
| SspI | AATATT | 1 cut(s) | 181 |
| SspMI | CTAG | 1 cut(s) | 239 |
| StyD4I | CCNGG | 1 cut(s) | 232 |
| TaaI | ACNGT | 1 cut(s) | 151 |
| TaqI | TCGA | 1 cut(s) | 300 |
| TasI | AATT | 5 cut(s) | 44, 55, 205, 290, 310 |
| Tru1I | TTAA | 3 cut(s) | 63, 204, 343 |
| Tru9I | TTAA | 3 cut(s) | 63, 204, 343 |
| TscAI | CASTG | 2 cut(s) | 174, 277 |
| TspDTI | ATGAA | 3 cut(s) | 17, 99, 295 |
| TspRI | CASTG | 2 cut(s) | 174, 277 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 33 |
| VpaK11BI | GGWCC | 2 cut(s) | 101, 323 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 237 |
| XapI | RAATTY | 2 cut(s) | 44, 290 |
| XmiI | GTMKAC | 1 cut(s) | 300 |
| XspI | CTAG | 1 cut(s) | 239 |