Rmu_co8382315.1_g000001

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8382315.1
Physical Location & Seq
Forward (+)
345 .. 1089
745 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8382315.1_g000001.1.cds

Sequence Viewer

Length: 531 bp
atgattagagctaaagcatacatgacttttgcaccacctaactcacagttggtgaaggacttgaaactgcgaactaaagaggtggacatgtggtcggtggaactcacaaggattctgatttatcttggaggtaaaatgatttgtacttttgttttcatcttgcattacttgctgtcaaacacattaaacatgcccctatcaattccccagactttgaaaaagaagaatgcaattagttattgctttgcagaaaatgagaaacatggaggcctcactatccaaagcagccgtgctttcccagactgctctgctatggccacaaaactacgttctatgaccacaccgactgcagagtactttgctctcgagtccaaggaaaggcaatttcctaaccgacacaagttgcatgatacacagctctatcattgtgctgtcttctccgacaatgttctggcatgtgcagtggttgtgaactccactgtttccactgccatggtattctcaaccagcatttccaataatatgttttaa

Protein Analysis

176

Amino Acids

19.89

Weight (kDa)

9.26

Isoelectric Point (pI)

42.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018662)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcoI YGGCCR 1 cut(s) 315
AfaI GTAC 2 cut(s) 145, 356
AfiI CCNNNNNNNGG 1 cut(s) 378
AflIII ACRYGT 1 cut(s) 87
AgsI TTSAA 2 cut(s) 64, 217
AhdI GACNNNNNGTC 1 cut(s) 91
AluBI AGCT 2 cut(s) 11, 418
AluI AGCT 2 cut(s) 11, 418
Ama87I CYCGRG 1 cut(s) 365
AoxI GGCC 2 cut(s) 268, 315
ApeKI GCWGC 1 cut(s) 285
AsuHPI GGTGA 1 cut(s) 64
AvaI CYCGRG 1 cut(s) 365
BalI TGGCCA 1 cut(s) 317
BbsI GAAGAC 1 cut(s) 427
BbvI GCAGC 1 cut(s) 297
BceAI ACGGC 1 cut(s) 273
BfmI CTRYAG 1 cut(s) 348
BisI GCNGC 1 cut(s) 286
BlsI GCNGC 1 cut(s) 287
BmcAI AGTACT 1 cut(s) 356
BmeRI GACNNNNNGTC 1 cut(s) 91
BmeT110I CYCGRG 1 cut(s) 365
BpiI GAAGAC 1 cut(s) 427
BsaJI CCNNGG 2 cut(s) 372, 492
Bsc4I CCNNNNNNNGG 1 cut(s) 378
BseDI CCNNGG 2 cut(s) 372, 492
BseLI CCNNNNNNNGG 1 cut(s) 378
BseXI GCAGC 1 cut(s) 297
BsgI GTGCAG 1 cut(s) 480
BshFI GGCC 2 cut(s) 270, 317
BsiHKCI CYCGRG 1 cut(s) 365
BslI CCNNNNNNNGG 1 cut(s) 378
BsmI GAATGC 1 cut(s) 232
BsnI GGCC 2 cut(s) 270, 317
BsoBI CYCGRG 1 cut(s) 365
Bsp19I CCATGG 1 cut(s) 492
BspANI GGCC 2 cut(s) 270, 317
BspMAI CTGCAG 1 cut(s) 352
BssECI CCNNGG 2 cut(s) 372, 492
BssT1I CCWWGG 2 cut(s) 372, 492
Bst4CI ACNGT 2 cut(s) 48, 481
BstAPI GCANNNNNTGC 1 cut(s) 169
BstDSI CCRYGG 1 cut(s) 492
BstMWI GCNNNNNNNGC 1 cut(s) 169
BstNSI RCATGY 3 cut(s) 91, 193, 459
BstSFI CTRYAG 1 cut(s) 348
BstV1I GCAGC 1 cut(s) 297
BstV2I GAAGAC 1 cut(s) 427
BstXI CCANNNNNNTGG 1 cut(s) 493
BsuRI GGCC 2 cut(s) 270, 317
BtgI CCRYGG 1 cut(s) 492
BtsI GCAGTG 2 cut(s) 468, 486
BtsIMutI CAGTG 3 cut(s) 468, 477, 486
Csp6I GTAC 2 cut(s) 144, 355
CviAII CATG 7 cut(s) 22, 88, 190, 263, 407, 456, 493
CviJI RGCY 5 cut(s) 11, 270, 288, 317, 418
CviKI_1 RGCY 5 cut(s) 11, 270, 288, 317, 418
CviQI GTAC 2 cut(s) 144, 355
DriI GACNNNNNGTC 1 cut(s) 91
EaeI YGGCCR 1 cut(s) 315
Eam1105I GACNNNNNGTC 1 cut(s) 91
Eco130I CCWWGG 2 cut(s) 372, 492
Eco147I AGGCCT 1 cut(s) 270
Eco88I CYCGRG 1 cut(s) 365
EcoT14I CCWWGG 2 cut(s) 372, 492
ErhI CCWWGG 2 cut(s) 372, 492
FaeI CATG 7 cut(s) 25, 91, 193, 266, 410, 459, 496
FatI CATG 7 cut(s) 21, 87, 189, 262, 406, 455, 492
Fnu4HI GCNGC 1 cut(s) 286
Fsp4HI GCNGC 1 cut(s) 286
GluI GCNGC 1 cut(s) 286
HaeIII GGCC 2 cut(s) 270, 317
Hin1II CATG 7 cut(s) 25, 91, 193, 266, 410, 459, 496
HinfI GANTC 2 cut(s) 112, 368
HphI GGTGA 1 cut(s) 64
Hpy166II GTNNAC 2 cut(s) 85, 472
Hpy188I TCNGA 2 cut(s) 117, 442
Hpy188III TCNNGA 1 cut(s) 365
Hpy8I GTNNAC 2 cut(s) 85, 472
HpyAV CCTTC 1 cut(s) 49
HpyCH4III ACNGT 2 cut(s) 48, 481
HpyCH4IV ACGT 1 cut(s) 328
HpyCH4V TGCA 7 cut(s) 32, 163, 230, 248, 350, 406, 461
HpyF10VI GCNNNNNNNGC 1 cut(s) 169
HpySE526I ACGT 1 cut(s) 328
Hsp92II CATG 7 cut(s) 25, 91, 193, 266, 410, 459, 496
LpnPI CCDG 4 cut(s) 221, 312, 437, 520
Lsp1109I GCAGC 1 cut(s) 297
MaeII ACGT 1 cut(s) 328
MboII GAAGA 2 cut(s) 235, 427
MlsI TGGCCA 1 cut(s) 317
MluCI AATT 3 cut(s) 201, 231, 383
MluNI TGGCCA 1 cut(s) 317
MlyI GAGTC 1 cut(s) 377
MmeI TCCRAC 1 cut(s) 465
MnlI CCTC 4 cut(s) 73, 122, 260, 281
Mox20I TGGCCA 1 cut(s) 317
MscI TGGCCA 1 cut(s) 317
MseI TTAA 2 cut(s) 185, 529
MslI CAYNNNNRTG 1 cut(s) 491
Msp20I TGGCCA 1 cut(s) 317
Mva1269I GAATGC 1 cut(s) 232
MwoI GCNNNNNNNGC 1 cut(s) 169
NcoI CCATGG 1 cut(s) 492
NlaIII CATG 7 cut(s) 25, 91, 193, 266, 410, 459, 496
NspI RCATGY 3 cut(s) 91, 193, 459
PaeR7I CTCGAG 1 cut(s) 365
PceI AGGCCT 1 cut(s) 270
PciI ACATGT 1 cut(s) 87
PctI GAATGC 1 cut(s) 232
PfeI GAWTC 1 cut(s) 112
PkrI GCNGC 1 cut(s) 287
PleI GAGTC 1 cut(s) 376
PpsI GAGTC 1 cut(s) 376
PscI ACATGT 1 cut(s) 87
PstI CTGCAG 1 cut(s) 352
RsaI GTAC 2 cut(s) 145, 356
RsaNI GTAC 2 cut(s) 144, 355
RseI CAYNNNNRTG 1 cut(s) 491
SaqAI TTAA 2 cut(s) 185, 529
SatI GCNGC 1 cut(s) 286
ScaI AGTACT 1 cut(s) 356
SchI GAGTC 1 cut(s) 377
SetI ASST 6 cut(s) 13, 40, 84, 133, 331, 420
SfcI CTRYAG 1 cut(s) 348
Sfr274I CTCGAG 1 cut(s) 365
SlaI CTCGAG 1 cut(s) 365
SmiMI CAYNNNNRTG 1 cut(s) 491
SmlI CTYRAG 1 cut(s) 365
SmoI CTYRAG 1 cut(s) 365
Sse9I AATT 3 cut(s) 201, 231, 383
SseBI AGGCCT 1 cut(s) 270
StuI AGGCCT 1 cut(s) 270
StyI CCWWGG 2 cut(s) 372, 492
TaaI ACNGT 2 cut(s) 48, 481
TaiI ACGT 1 cut(s) 331
TaqI TCGA 1 cut(s) 366
TasI AATT 3 cut(s) 201, 231, 383
TatI WGTACW 2 cut(s) 143, 354
TfiI GAWTC 1 cut(s) 112
Tru1I TTAA 2 cut(s) 185, 529
Tru9I TTAA 2 cut(s) 185, 529
TscAI CASTG 3 cut(s) 468, 484, 493
TseI GCWGC 1 cut(s) 285
TspDTI ATGAA 1 cut(s) 145
TspRI CASTG 3 cut(s) 468, 484, 493
XceI RCATGY 3 cut(s) 91, 193, 459
XhoI CTCGAG 1 cut(s) 365
ZrmI AGTACT 1 cut(s) 356
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.