Rh6BG337300

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
Physical Location & Seq
Reverse (-)
57032783 .. 57033858
1076 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG337300.1

Sequence Viewer

Length: 474 bp
ATGATAGTCTTCCATTCGGAAAAGGCTTTTGTTCAGCATTTAAGCATGGTGACTGCAAGATTTGGCGGTCAGACAATTTTGAAAAAGAAGAATGCAATTAGTTATCCGTGCTTTCCCAGACTGCTTTGCTACGGCCACAAAACTACATTCTATGACCACAGTGCTGAAGAGCAACTGACTGCAGAGTACTTTGCCCTCGAGTCCAAGGAAAGGCAATTTCCTAACCGACACAAGTTGCATGATACACAGCTCTATCATTGTGCTGTCTTCTCCGACAATGTTCTGGCATGTGCAGTGGTTGTGAACTCCACTGTTTCCACTGCCATGGAGCCAGAGAAAATTGTTTTCCATGTGGTGACTGATTCACCCAATTTTAGCATTGTCTATCCTCCTGGAAAAAGCCACCATCCAAGTTTAGAGCATAGAGAGTTTTGTGACAAGCGTAGAGAGCTAAAGCAGGAACTTCCATACTAA

Protein Analysis

157

Amino Acids

18.14

Weight (kDa)

7.73

Isoelectric Point (pI)

43.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0018662)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 66
AcoI YGGCCR 1 cut(s) 133
AcuI CTGAAG 1 cut(s) 186
AfaI GTAC 1 cut(s) 188
AfiI CCNNNNNNNGG 1 cut(s) 210
AgsI TTSAA 1 cut(s) 82
AjnI CCWGG 1 cut(s) 391
AluBI AGCT 2 cut(s) 250, 451
AluI AGCT 2 cut(s) 250, 451
Ama87I CYCGRG 1 cut(s) 197
AoxI GGCC 1 cut(s) 133
AsuHPI GGTGA 3 cut(s) 61, 357, 367
AvaI CYCGRG 1 cut(s) 197
BbsI GAAGAC 1 cut(s) 259
BccI CCATC 1 cut(s) 414
BceAI ACGGC 1 cut(s) 148
BciT130I CCWGG 1 cut(s) 393
BfmI CTRYAG 1 cut(s) 180
BmcAI AGTACT 1 cut(s) 188
Bme1390I CCNGG 1 cut(s) 393
BmeT110I CYCGRG 1 cut(s) 197
BmiI GGNNCC 1 cut(s) 330
BmrFI CCNGG 1 cut(s) 393
BpiI GAAGAC 1 cut(s) 259
BsaJI CCNNGG 2 cut(s) 204, 324
Bsc4I CCNNNNNNNGG 1 cut(s) 210
BseBI CCWGG 1 cut(s) 393
BseDI CCNNGG 2 cut(s) 204, 324
BseGI GGATG 1 cut(s) 406
BseLI CCNNNNNNNGG 1 cut(s) 210
BsgI GTGCAG 1 cut(s) 312
BshFI GGCC 1 cut(s) 135
BsiHKCI CYCGRG 1 cut(s) 197
BslI CCNNNNNNNGG 1 cut(s) 210
BsmI GAATGC 1 cut(s) 97
BsnI GGCC 1 cut(s) 135
BsoBI CYCGRG 1 cut(s) 197
Bsp19I CCATGG 1 cut(s) 324
BspACI CCGC 1 cut(s) 66
BspANI GGCC 1 cut(s) 135
BspLI GGNNCC 1 cut(s) 330
BspMAI CTGCAG 1 cut(s) 184
BspQI GCTCTTC 1 cut(s) 162
BssECI CCNNGG 2 cut(s) 204, 324
BssT1I CCWWGG 2 cut(s) 204, 324
Bst2UI CCWGG 1 cut(s) 393
Bst4CI ACNGT 2 cut(s) 161, 313
Bst6I CTCTTC 1 cut(s) 162
BstDSI CCRYGG 1 cut(s) 324
BstF5I GGATG 1 cut(s) 406
BstMWI GCNNNNNNNGC 1 cut(s) 448
BstNI CCWGG 1 cut(s) 393
BstNSI RCATGY 1 cut(s) 291
BstSCI CCNGG 1 cut(s) 391
BstSFI CTRYAG 1 cut(s) 180
BstV2I GAAGAC 1 cut(s) 259
BstXI CCANNNNNNTGG 1 cut(s) 325
BsuRI GGCC 1 cut(s) 135
BtgI CCRYGG 1 cut(s) 324
BtsCI GGATG 1 cut(s) 406
BtsI GCAGTG 2 cut(s) 300, 318
BtsIMutI CAGTG 4 cut(s) 166, 300, 309, 318
Csp6I GTAC 1 cut(s) 187
CviAII CATG 5 cut(s) 46, 239, 288, 325, 350
CviJI RGCY 6 cut(s) 26, 135, 250, 331, 402, 451
CviKI_1 RGCY 6 cut(s) 26, 135, 250, 331, 402, 451
CviQI GTAC 1 cut(s) 187
EaeI YGGCCR 1 cut(s) 133
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
Eco130I CCWWGG 2 cut(s) 204, 324
Eco57I CTGAAG 1 cut(s) 186
Eco88I CYCGRG 1 cut(s) 197
EcoRII CCWGG 1 cut(s) 391
EcoT14I CCWWGG 2 cut(s) 204, 324
ErhI CCWWGG 2 cut(s) 204, 324
FaeI CATG 5 cut(s) 49, 242, 291, 328, 353
FaiI YATR 8 cut(s) 47, 153, 240, 289, 326, 351, 423, 469
FatI CATG 5 cut(s) 45, 238, 287, 324, 349
FokI GGATG 1 cut(s) 393
HaeIII GGCC 1 cut(s) 135
Hin1II CATG 5 cut(s) 49, 242, 291, 328, 353
HinfI GANTC 2 cut(s) 200, 362
HphI GGTGA 3 cut(s) 61, 357, 367
Hpy166II GTNNAC 1 cut(s) 304
Hpy188I TCNGA 3 cut(s) 19, 72, 274
Hpy8I GTNNAC 1 cut(s) 304
HpyCH4III ACNGT 2 cut(s) 161, 313
HpyCH4V TGCA 5 cut(s) 56, 95, 182, 238, 293
HpyF10VI GCNNNNNNNGC 1 cut(s) 448
Hsp92II CATG 5 cut(s) 49, 242, 291, 328, 353
LguI GCTCTTC 1 cut(s) 162
LmnI GCTCC 1 cut(s) 328
LpnPI CCDG 6 cut(s) 130, 269, 345, 378, 405, 443
MaeIII GTNAC 3 cut(s) 49, 355, 434
MboII GAAGA 3 cut(s) 100, 179, 259
MluCI AATT 5 cut(s) 75, 96, 215, 339, 370
MlyI GAGTC 1 cut(s) 209
MmeI TCCRAC 1 cut(s) 297
MnlI CCTC 2 cut(s) 206, 399
MseI TTAA 1 cut(s) 41
MslI CAYNNNNRTG 1 cut(s) 323
MspR9I CCNGG 1 cut(s) 393
Mva1269I GAATGC 1 cut(s) 97
MvaI CCWGG 1 cut(s) 393
MwoI GCNNNNNNNGC 1 cut(s) 448
NcoI CCATGG 1 cut(s) 324
NlaIII CATG 5 cut(s) 49, 242, 291, 328, 353
NlaIV GGNNCC 1 cut(s) 330
NmuCI GTSAC 3 cut(s) 49, 355, 434
NspI RCATGY 1 cut(s) 291
PaeR7I CTCGAG 1 cut(s) 197
PciSI GCTCTTC 1 cut(s) 162
PctI GAATGC 1 cut(s) 97
PfeI GAWTC 1 cut(s) 362
PfoI TCCNGGA 1 cut(s) 391
PleI GAGTC 1 cut(s) 208
PpsI GAGTC 1 cut(s) 208
Psp6I CCWGG 1 cut(s) 391
PspGI CCWGG 1 cut(s) 391
PspN4I GGNNCC 1 cut(s) 330
PspXI VCTCGAGB 1 cut(s) 197
PstI CTGCAG 1 cut(s) 184
RsaI GTAC 1 cut(s) 188
RsaNI GTAC 1 cut(s) 187
RseI CAYNNNNRTG 1 cut(s) 323
SapI GCTCTTC 1 cut(s) 162
SaqAI TTAA 1 cut(s) 41
ScaI AGTACT 1 cut(s) 188
SchI GAGTC 1 cut(s) 209
ScrFI CCNGG 1 cut(s) 393
SetI ASST 2 cut(s) 252, 453
SfcI CTRYAG 1 cut(s) 180
Sfr274I CTCGAG 1 cut(s) 197
SlaI CTCGAG 1 cut(s) 197
SmiMI CAYNNNNRTG 1 cut(s) 323
SmlI CTYRAG 1 cut(s) 197
SmoI CTYRAG 1 cut(s) 197
Sse9I AATT 5 cut(s) 75, 96, 215, 339, 370
SsiI CCGC 1 cut(s) 66
StyD4I CCNGG 1 cut(s) 391
StyI CCWWGG 2 cut(s) 204, 324
TaaI ACNGT 2 cut(s) 161, 313
TaqI TCGA 1 cut(s) 198
TasI AATT 5 cut(s) 75, 96, 215, 339, 370
TatI WGTACW 1 cut(s) 186
TfiI GAWTC 1 cut(s) 362
Tru1I TTAA 1 cut(s) 41
Tru9I TTAA 1 cut(s) 41
TscAI CASTG 4 cut(s) 166, 300, 316, 325
TseFI GTSAC 3 cut(s) 49, 355, 434
Tsp45I GTSAC 3 cut(s) 49, 355, 434
TspGWI ACGGA 1 cut(s) 96
TspRI CASTG 4 cut(s) 166, 300, 316, 325
XceI RCATGY 1 cut(s) 291
XhoI CTCGAG 1 cut(s) 197
ZrmI AGTACT 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.