Caspase domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G79320 AT1G79330 AT1G79340 |
| fragaria_vesca | FvH4_3g13930 |
| malus_domestica | MD10G1218100.v1.1 |
| prunus_persica | Prupe.4G126000_v2.0.a1 |
| pyrus_communis | pycom05g21610 pycom10g18390 |
| rosa_chinensis | RchiOBHm_Chr5g0023131 RchiOBHm_Chr5g0023141 |
| rosa_laevigata | RLG00000032701 RLG00000032702 |
| rosa_multiflora | Rmu_co8416803.1_g000001 Rmu_co8502493.1_g000001 Rmu_sc0007300.1_g000020 Rmu_sc0015109.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00056200 Rroxscaffold_1G00056210 |
| rosa_rugosa | Rorug05G0077400 Rorug05G0077500 |
| rosa_samantha | Rh5AG163500 Rh5AG163700 Rh5BG162800 Rh5BG162900 Rh5CG177700 Rh5CG177900 Rh5DG164100 Rh5DG164300 |
| rosa_wichuraiana | Rw5G014750 Rw5G014770 Rw5G015050 Rw5G015060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 3 cut(s) | 403, 548, 1097 |
| AatII | GACGTC | 1 cut(s) | 78 |
| Acc36I | ACCTGC | 1 cut(s) | 552 |
| AccB1I | GGYRCC | 1 cut(s) | 41 |
| AccII | CGCG | 1 cut(s) | 92 |
| AciI | CCGC | 3 cut(s) | 187, 423, 876 |
| AclWI | GGATC | 3 cut(s) | 161, 202, 932 |
| AcsI | RAATTY | 1 cut(s) | 1005 |
| AcuI | CTGAAG | 1 cut(s) | 340 |
| AcyI | GRCGYC | 2 cut(s) | 75, 147 |
| AfaI | GTAC | 1 cut(s) | 89 |
| AfeI | AGCGCT | 1 cut(s) | 107 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 189, 875, 876 |
| AflIII | ACRYGT | 1 cut(s) | 90 |
| AjnI | CCWGG | 1 cut(s) | 1072 |
| AluBI | AGCT | 7 cut(s) | 55, 376, 394, 613, 650, 950, 959 |
| AluI | AGCT | 7 cut(s) | 55, 376, 394, 613, 650, 950, 959 |
| Alw21I | GWGCWC | 2 cut(s) | 57, 961 |
| Alw26I | GTCTC | 3 cut(s) | 272, 519, 534 |
| AlwI | GGATC | 3 cut(s) | 161, 202, 932 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 894, 1045 |
| Ama87I | CYCGRG | 1 cut(s) | 695 |
| Aor51HI | AGCGCT | 1 cut(s) | 107 |
| AoxI | GGCC | 2 cut(s) | 427, 617 |
| ApeKI | GCWGC | 4 cut(s) | 27, 63, 376, 894 |
| ApoI | RAATTY | 1 cut(s) | 1005 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 303, 335 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 668 |
| AspLEI | GCGC | 1 cut(s) | 108 |
| AspS9I | GGNCC | 1 cut(s) | 502 |
| AsuHPI | GGTGA | 1 cut(s) | 1013 |
| AsuII | TTCGAA | 1 cut(s) | 117 |
| AvaI | CYCGRG | 1 cut(s) | 695 |
| AvaII | GGWCC | 1 cut(s) | 502 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 844, 877 |
| BanI | GGYRCC | 1 cut(s) | 41 |
| BanII | GRGCYC | 3 cut(s) | 57, 225, 961 |
| BbsI | GAAGAC | 1 cut(s) | 129 |
| Bbv12I | GWGCWC | 2 cut(s) | 57, 961 |
| BbvCI | CCTCAGC | 1 cut(s) | 614 |
| BbvI | GCAGC | 4 cut(s) | 14, 50, 363, 881 |
| BccI | CCATC | 3 cut(s) | 191, 866, 992 |
| BciT130I | CCWGG | 1 cut(s) | 1074 |
| BcoDI | GTCTC | 3 cut(s) | 272, 519, 534 |
| BfaI | CTAG | 2 cut(s) | 651, 803 |
| BfmI | CTRYAG | 2 cut(s) | 444, 930 |
| BfoI | RGCGCY | 1 cut(s) | 109 |
| BfuAI | ACCTGC | 1 cut(s) | 552 |
| BisI | GCNGC | 4 cut(s) | 28, 64, 377, 895 |
| BlsI | GCNGC | 4 cut(s) | 29, 65, 378, 896 |
| Bme1390I | CCNGG | 1 cut(s) | 1074 |
| Bme18I | GGWCC | 1 cut(s) | 502 |
| BmeT110I | CYCGRG | 1 cut(s) | 695 |
| BmgT120I | GGNCC | 1 cut(s) | 502 |
| BmiI | GGNNCC | 1 cut(s) | 43 |
| BmrFI | CCNGG | 1 cut(s) | 1074 |
| BmsI | GCATC | 2 cut(s) | 324, 910 |
| BpiI | GAAGAC | 1 cut(s) | 129 |
| Bpu10I | CCTNAGC | 1 cut(s) | 614 |
| Bpu14I | TTCGAA | 1 cut(s) | 117 |
| BpuEI | CTTGAG | 3 cut(s) | 41, 557, 1007 |
| BsaAI | YACGTR | 1 cut(s) | 469 |
| BsaBI | GATNNNNATC | 2 cut(s) | 884, 924 |
| BsaHI | GRCGYC | 2 cut(s) | 75, 147 |
| BsaI | GGTCTC | 2 cut(s) | 272, 534 |
| BsaJI | CCNNGG | 2 cut(s) | 856, 1073 |
| BsaWI | WCCGGW | 1 cut(s) | 173 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 189, 875, 876 |
| Bse118I | RCCGGY | 1 cut(s) | 281 |
| Bse1I | ACTGG | 2 cut(s) | 304, 548 |
| Bse3DI | GCAATG | 1 cut(s) | 978 |
| Bse8I | GATNNNNATC | 2 cut(s) | 884, 924 |
| BseBI | CCWGG | 1 cut(s) | 1074 |
| BseDI | CCNNGG | 2 cut(s) | 856, 1073 |
| BseGI | GGATG | 3 cut(s) | 183, 376, 598 |
| BseJI | GATNNNNATC | 2 cut(s) | 884, 924 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 189, 875, 876 |
| BseMI | GCAATG | 1 cut(s) | 978 |
| BseMII | CTCAG | 3 cut(s) | 507, 605, 1121 |
| BseNI | ACTGG | 2 cut(s) | 304, 548 |
| BseRI | GAGGAG | 1 cut(s) | 506 |
| BseXI | GCAGC | 4 cut(s) | 14, 50, 363, 881 |
| BseYI | CCCAGC | 1 cut(s) | 1065 |
| Bsh1236I | CGCG | 1 cut(s) | 92 |
| BshFI | GGCC | 2 cut(s) | 429, 619 |
| BshNI | GGYRCC | 1 cut(s) | 41 |
| BsiHKAI | GWGCWC | 2 cut(s) | 57, 961 |
| BsiHKCI | CYCGRG | 1 cut(s) | 695 |
| BsiSI | CCGG | 4 cut(s) | 174, 282, 380, 846 |
| BslFI | GGGAC | 3 cut(s) | 274, 305, 639 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 189, 875, 876 |
| BsmAI | GTCTC | 3 cut(s) | 272, 519, 534 |
| BsmFI | GGGAC | 3 cut(s) | 274, 305, 639 |
| BsmI | GAATGC | 1 cut(s) | 317 |
| BsnI | GGCC | 2 cut(s) | 429, 619 |
| Bso31I | GGTCTC | 2 cut(s) | 272, 534 |
| BsoBI | CYCGRG | 1 cut(s) | 695 |
| Bsp119I | TTCGAA | 1 cut(s) | 117 |
| Bsp1286I | GDGCHC | 3 cut(s) | 57, 225, 961 |
| Bsp143I | GATC | 6 cut(s) | 21, 166, 207, 480, 774, 937 |
| BspACI | CCGC | 3 cut(s) | 187, 423, 876 |
| BspANI | GGCC | 2 cut(s) | 429, 619 |
| BspCNI | CTCAG | 3 cut(s) | 508, 606, 1120 |
| BspFNI | CGCG | 1 cut(s) | 92 |
| BspLI | GGNNCC | 1 cut(s) | 43 |
| BspMI | ACCTGC | 1 cut(s) | 552 |
| BspPI | GGATC | 3 cut(s) | 161, 202, 932 |
| BspQI | GCTCTTC | 1 cut(s) | 708 |
| BspT104I | TTCGAA | 1 cut(s) | 117 |
| BspT107I | GGYRCC | 1 cut(s) | 41 |
| BspTNI | GGTCTC | 2 cut(s) | 272, 534 |
| BsrDI | GCAATG | 1 cut(s) | 978 |
| BsrFI | RCCGGY | 1 cut(s) | 281 |
| BsrI | ACTGG | 2 cut(s) | 304, 548 |
| BssAI | RCCGGY | 1 cut(s) | 281 |
| BssECI | CCNNGG | 2 cut(s) | 856, 1073 |
| BssMI | GATC | 6 cut(s) | 21, 166, 207, 480, 774, 937 |
| BssNI | GRCGYC | 2 cut(s) | 75, 147 |
| Bst2UI | CCWGG | 1 cut(s) | 1074 |
| Bst4CI | ACNGT | 2 cut(s) | 251, 857 |
| Bst6I | CTCTTC | 5 cut(s) | 708, 723, 774, 783, 828 |
| BstACI | GRCGYC | 2 cut(s) | 75, 147 |
| BstBAI | YACGTR | 1 cut(s) | 469 |
| BstBI | TTCGAA | 1 cut(s) | 117 |
| BstC8I | GCNNGC | 3 cut(s) | 53, 94, 392 |
| BstDEI | CTNAG | 3 cut(s) | 516, 614, 1107 |
| BstDSI | CCRYGG | 1 cut(s) | 856 |
| BstF5I | GGATG | 3 cut(s) | 183, 376, 598 |
| BstFNI | CGCG | 1 cut(s) | 92 |
| BstH2I | RGCGCY | 1 cut(s) | 109 |
| BstHHI | GCGC | 1 cut(s) | 108 |
| BstKTI | GATC | 6 cut(s) | 24, 169, 210, 483, 777, 940 |
| BstMAI | GTCTC | 3 cut(s) | 272, 519, 534 |
| BstMBI | GATC | 6 cut(s) | 21, 166, 207, 480, 774, 937 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 48, 956, 1075 |
| BstNI | CCWGG | 1 cut(s) | 1074 |
| BstNSI | RCATGY | 1 cut(s) | 88 |
| BstSCI | CCNGG | 1 cut(s) | 1072 |
| BstSFI | CTRYAG | 2 cut(s) | 444, 930 |
| BstUI | CGCG | 1 cut(s) | 92 |
| BstV1I | GCAGC | 4 cut(s) | 14, 50, 363, 881 |
| BstV2I | GAAGAC | 1 cut(s) | 129 |
| BstX2I | RGATCY | 1 cut(s) | 937 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1073 |
| BstYI | RGATCY | 1 cut(s) | 937 |
| BsuRI | GGCC | 2 cut(s) | 429, 619 |
| BtgI | CCRYGG | 1 cut(s) | 856 |
| BtsCI | GGATG | 3 cut(s) | 183, 376, 598 |
| BtsI | GCAGTG | 2 cut(s) | 21, 1093 |
| BtsIMutI | CAGTG | 6 cut(s) | 21, 256, 297, 342, 895, 1093 |
| BveI | ACCTGC | 1 cut(s) | 552 |
| Cac8I | GCNNGC | 3 cut(s) | 53, 94, 392 |
| CaiI | CAGNNNCTG | 2 cut(s) | 894, 1045 |
| CfoI | GCGC | 1 cut(s) | 108 |
| Cfr10I | RCCGGY | 1 cut(s) | 281 |
| Cfr13I | GGNCC | 1 cut(s) | 502 |
| CseI | GACGC | 1 cut(s) | 155 |
| Csp6I | GTAC | 1 cut(s) | 88 |
| CviAII | CATG | 7 cut(s) | 85, 257, 331, 414, 682, 719, 748 |
| CviQI | GTAC | 1 cut(s) | 88 |
| DdeI | CTNAG | 3 cut(s) | 516, 614, 1107 |
| DpnI | GATC | 6 cut(s) | 23, 168, 209, 482, 776, 939 |
| DpnII | GATC | 6 cut(s) | 21, 166, 207, 480, 774, 937 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 403, 548, 1097 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 403, 548, 1097 |
| Eam1104I | CTCTTC | 5 cut(s) | 708, 723, 774, 783, 828 |
| EarI | CTCTTC | 5 cut(s) | 708, 723, 774, 783, 828 |
| Ecl136II | GAGCTC | 2 cut(s) | 55, 959 |
| Eco147I | AGGCCT | 1 cut(s) | 429 |
| Eco24I | GRGCYC | 3 cut(s) | 57, 225, 961 |
| Eco31I | GGTCTC | 2 cut(s) | 272, 534 |
| Eco47I | GGWCC | 1 cut(s) | 502 |
| Eco47III | AGCGCT | 1 cut(s) | 107 |
| Eco53kI | GAGCTC | 2 cut(s) | 55, 959 |
| Eco57I | CTGAAG | 1 cut(s) | 340 |
| Eco88I | CYCGRG | 1 cut(s) | 695 |
| EcoICRI | GAGCTC | 2 cut(s) | 55, 959 |
| EcoRII | CCWGG | 1 cut(s) | 1072 |
| EcoT22I | ATGCAT | 1 cut(s) | 317 |
| EcoT38I | GRGCYC | 3 cut(s) | 57, 225, 961 |
| FaeI | CATG | 7 cut(s) | 88, 260, 334, 417, 685, 722, 751 |
| FaqI | GGGAC | 3 cut(s) | 274, 305, 639 |
| FatI | CATG | 7 cut(s) | 84, 256, 330, 413, 681, 718, 747 |
| FauI | CCCGC | 1 cut(s) | 869 |
| Fnu4HI | GCNGC | 4 cut(s) | 28, 64, 377, 895 |
| FokI | GGATG | 3 cut(s) | 170, 383, 605 |
| FriOI | GRGCYC | 3 cut(s) | 57, 225, 961 |
| Fsp4HI | GCNGC | 4 cut(s) | 28, 64, 377, 895 |
| FspBI | CTAG | 2 cut(s) | 651, 803 |
| GlaI | GCGC | 1 cut(s) | 107 |
| GluI | GCNGC | 4 cut(s) | 28, 64, 377, 895 |
| GsaI | CCCAGC | 1 cut(s) | 1069 |
| HaeII | RGCGCY | 1 cut(s) | 109 |
| HaeIII | GGCC | 2 cut(s) | 429, 619 |
| HapII | CCGG | 4 cut(s) | 174, 282, 380, 846 |
| HgaI | GACGC | 1 cut(s) | 155 |
| HhaI | GCGC | 1 cut(s) | 108 |
| Hin1I | GRCGYC | 2 cut(s) | 75, 147 |
| Hin1II | CATG | 7 cut(s) | 88, 260, 334, 417, 685, 722, 751 |
| Hin6I | GCGC | 1 cut(s) | 106 |
| HinP1I | GCGC | 1 cut(s) | 106 |
| HincII | GTYRAC | 1 cut(s) | 70 |
| HindII | GTYRAC | 1 cut(s) | 70 |
| HindIII | AAGCTT | 1 cut(s) | 948 |
| HinfI | GANTC | 7 cut(s) | 155, 262, 410, 440, 512, 880, 1042 |
| HpaI | GTTAAC | 1 cut(s) | 70 |
| HpaII | CCGG | 4 cut(s) | 174, 282, 380, 846 |
| HphI | GGTGA | 1 cut(s) | 1013 |
| Hpy166II | GTNNAC | 3 cut(s) | 70, 254, 1027 |
| Hpy188I | TCNGA | 6 cut(s) | 141, 207, 409, 517, 641, 1051 |
| Hpy188III | TCNNGA | 4 cut(s) | 532, 697, 869, 941 |
| Hpy8I | GTNNAC | 3 cut(s) | 70, 254, 1027 |
| Hpy99I | CGWCG | 6 cut(s) | 77, 155, 230, 233, 290, 1103 |
| HpyAV | CCTTC | 7 cut(s) | 4, 32, 41, 278, 377, 479, 582 |
| HpyCH4III | ACNGT | 2 cut(s) | 251, 857 |
| HpyCH4IV | ACGT | 4 cut(s) | 75, 231, 468, 1098 |
| HpyCH4V | TGCA | 7 cut(s) | 30, 315, 390, 747, 923, 971, 1086 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 48, 956, 1075 |
| HpyF3I | CTNAG | 3 cut(s) | 516, 614, 1107 |
| HpySE526I | ACGT | 4 cut(s) | 75, 231, 468, 1098 |
| Hsp92I | GRCGYC | 2 cut(s) | 75, 147 |
| Hsp92II | CATG | 7 cut(s) | 88, 260, 334, 417, 685, 722, 751 |
| HspAI | GCGC | 1 cut(s) | 106 |
| KspAI | GTTAAC | 1 cut(s) | 70 |
| Kzo9I | GATC | 6 cut(s) | 21, 166, 207, 480, 774, 937 |
| LguI | GCTCTTC | 1 cut(s) | 708 |
| LmnI | GCTCC | 2 cut(s) | 493, 956 |
| Lsp1109I | GCAGC | 4 cut(s) | 14, 50, 363, 881 |
| LweI | GCATC | 2 cut(s) | 324, 910 |
| MaeI | CTAG | 2 cut(s) | 651, 803 |
| MaeII | ACGT | 4 cut(s) | 75, 231, 468, 1098 |
| MaeIII | GTNAC | 2 cut(s) | 1058, 1088 |
| MalI | GATC | 6 cut(s) | 23, 168, 209, 482, 776, 939 |
| MboI | GATC | 6 cut(s) | 21, 166, 207, 480, 774, 937 |
| MflI | RGATCY | 1 cut(s) | 937 |
| MhlI | GDGCHC | 3 cut(s) | 57, 225, 961 |
| MluCI | AATT | 2 cut(s) | 624, 1005 |
| MluI | ACGCGT | 1 cut(s) | 90 |
| MlyI | GAGTC | 2 cut(s) | 256, 521 |
| Mph1103I | ATGCAT | 1 cut(s) | 317 |
| MroXI | GAANNNNTTC | 1 cut(s) | 668 |
| MseI | TTAA | 3 cut(s) | 69, 675, 765 |
| MslI | CAYNNNNRTG | 1 cut(s) | 249 |
| MspA1I | CMGCKG | 1 cut(s) | 423 |
| MspI | CCGG | 4 cut(s) | 174, 282, 380, 846 |
| MspR9I | CCNGG | 1 cut(s) | 1074 |
| Mva1269I | GAATGC | 1 cut(s) | 317 |
| MvaI | CCWGG | 1 cut(s) | 1074 |
| MvnI | CGCG | 1 cut(s) | 92 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 48, 956, 1075 |
| NdeII | GATC | 6 cut(s) | 21, 166, 207, 480, 774, 937 |
| NlaIII | CATG | 7 cut(s) | 88, 260, 334, 417, 685, 722, 751 |
| NlaIV | GGNNCC | 1 cut(s) | 43 |
| NmeAIII | GCCGAG | 2 cut(s) | 244, 301 |
| NmuCI | GTSAC | 1 cut(s) | 1088 |
| NsiI | ATGCAT | 1 cut(s) | 317 |
| NspI | RCATGY | 1 cut(s) | 88 |
| NspV | TTCGAA | 1 cut(s) | 117 |
| PaeR7I | CTCGAG | 1 cut(s) | 695 |
| PceI | AGGCCT | 1 cut(s) | 429 |
| PciSI | GCTCTTC | 1 cut(s) | 708 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 42, 315, 783 |
| PctI | GAATGC | 1 cut(s) | 317 |
| PdmI | GAANNNNTTC | 1 cut(s) | 668 |
| PfeI | GAWTC | 5 cut(s) | 155, 410, 440, 880, 1042 |
| PkrI | GCNGC | 4 cut(s) | 29, 65, 378, 896 |
| PleI | GAGTC | 2 cut(s) | 256, 520 |
| PpsI | GAGTC | 2 cut(s) | 256, 520 |
| Ppu21I | YACGTR | 1 cut(s) | 469 |
| Psp124BI | GAGCTC | 2 cut(s) | 57, 961 |
| Psp6I | CCWGG | 1 cut(s) | 1072 |
| PspFI | CCCAGC | 1 cut(s) | 1065 |
| PspGI | CCWGG | 1 cut(s) | 1072 |
| PspN4I | GGNNCC | 1 cut(s) | 43 |
| PspPI | GGNCC | 1 cut(s) | 502 |
| PstNI | CAGNNNCTG | 2 cut(s) | 894, 1045 |
| PsuI | RGATCY | 1 cut(s) | 937 |
| RsaI | GTAC | 1 cut(s) | 89 |
| RsaNI | GTAC | 1 cut(s) | 88 |
| RseI | CAYNNNNRTG | 1 cut(s) | 249 |
| SacI | GAGCTC | 2 cut(s) | 57, 961 |
| SapI | GCTCTTC | 1 cut(s) | 708 |
| SaqAI | TTAA | 3 cut(s) | 69, 675, 765 |
| SatI | GCNGC | 4 cut(s) | 28, 64, 377, 895 |
| Sau3AI | GATC | 6 cut(s) | 21, 166, 207, 480, 774, 937 |
| Sau96I | GGNCC | 1 cut(s) | 502 |
| SchI | GAGTC | 2 cut(s) | 256, 521 |
| ScrFI | CCNGG | 1 cut(s) | 1074 |
| SduI | GDGCHC | 3 cut(s) | 57, 225, 961 |
| SfaNI | GCATC | 2 cut(s) | 324, 910 |
| SfcI | CTRYAG | 2 cut(s) | 444, 930 |
| Sfr274I | CTCGAG | 1 cut(s) | 695 |
| SfuI | TTCGAA | 1 cut(s) | 117 |
| SinI | GGWCC | 1 cut(s) | 502 |
| SlaI | CTCGAG | 1 cut(s) | 695 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 249 |
| SmlI | CTYRAG | 4 cut(s) | 56, 572, 695, 986 |
| SmoI | CTYRAG | 4 cut(s) | 56, 572, 695, 986 |
| Sse9I | AATT | 2 cut(s) | 624, 1005 |
| SseBI | AGGCCT | 1 cut(s) | 429 |
| SsiI | CCGC | 3 cut(s) | 187, 423, 876 |
| SspMI | CTAG | 2 cut(s) | 651, 803 |
| SstI | GAGCTC | 2 cut(s) | 57, 961 |
| StuI | AGGCCT | 1 cut(s) | 429 |
| StyD4I | CCNGG | 1 cut(s) | 1072 |
| TaaI | ACNGT | 2 cut(s) | 251, 857 |
| TaiI | ACGT | 4 cut(s) | 78, 234, 471, 1101 |
| TaqI | TCGA | 8 cut(s) | 5, 117, 132, 483, 552, 696, 777, 1101 |
| TasI | AATT | 2 cut(s) | 624, 1005 |
| TfiI | GAWTC | 5 cut(s) | 155, 410, 440, 880, 1042 |
| Tru1I | TTAA | 3 cut(s) | 69, 675, 765 |
| Tru9I | TTAA | 3 cut(s) | 69, 675, 765 |
| TscAI | CASTG | 6 cut(s) | 21, 256, 304, 349, 895, 1093 |
| TseFI | GTSAC | 1 cut(s) | 1088 |
| TseI | GCWGC | 4 cut(s) | 27, 63, 376, 894 |
| Tsp45I | GTSAC | 1 cut(s) | 1088 |
| TspDTI | ATGAA | 9 cut(s) | 233, 347, 402, 453, 661, 677, 726, 846, 999 |
| TspRI | CASTG | 6 cut(s) | 21, 256, 304, 349, 895, 1093 |
| VpaK11BI | GGWCC | 1 cut(s) | 502 |
| XapI | RAATTY | 1 cut(s) | 1005 |
| XceI | RCATGY | 1 cut(s) | 88 |
| XhoI | CTCGAG | 1 cut(s) | 695 |
| XmnI | GAANNNNTTC | 1 cut(s) | 668 |
| XspI | CTAG | 2 cut(s) | 651, 803 |
| ZraI | GACGTC | 1 cut(s) | 76 |
| Zsp2I | ATGCAT | 1 cut(s) | 317 |