cyclic nucleotide-gated ion channel
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g36620 |
| malus_domestica | MD15G1106000.v1.1 |
| prunus_persica | Prupe.1G457900_v2.0.a1 |
| pyrus_communis | pycom15g09630 pycom15g09650 |
| rosa_chinensis | RchiOBHm_Chr6g0305181 |
| rosa_laevigata | RLG00000010910 |
| rosa_multiflora | Rmu_sc0000061.1_g000007 Rmu_sc0000061.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00163060 Rroxscaffold_7G00163070 |
| rosa_rugosa | Rorug06G0338300 |
| rosa_samantha | Rh6AG450000 Rh6BG451400 Rh6CG463700 Rh6CG463800 Rh6DG450600 |
| rosa_wichuraiana | Rw6G039200 Rw6G039220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 57 |
| Acc36I | ACCTGC | 1 cut(s) | 604 |
| Acc65I | GGTACC | 1 cut(s) | 804 |
| AccB1I | GGYRCC | 2 cut(s) | 804, 1517 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 134 |
| AciI | CCGC | 3 cut(s) | 296, 398, 1249 |
| AclWI | GGATC | 4 cut(s) | 215, 287, 488, 501 |
| AcoI | YGGCCR | 1 cut(s) | 619 |
| AcsI | RAATTY | 3 cut(s) | 842, 1102, 2041 |
| AcuI | CTGAAG | 1 cut(s) | 2130 |
| AcyI | GRCGYC | 2 cut(s) | 922, 1888 |
| AfaI | GTAC | 7 cut(s) | 321, 391, 806, 943, 1052, 1328, 1997 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 134 |
| AflIII | ACRYGT | 4 cut(s) | 380, 771, 1306, 1435 |
| AjiI | CACGTC | 2 cut(s) | 787, 1438 |
| AjnI | CCWGG | 4 cut(s) | 86, 223, 1639, 2066 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1892, 1924 |
| AleI | CACNNNNGTG | 1 cut(s) | 719 |
| Alw21I | GWGCWC | 2 cut(s) | 1511, 1589 |
| Alw26I | GTCTC | 8 cut(s) | 725, 1033, 1219, 1248, 1267, 1392, 1630, 2029 |
| AlwI | GGATC | 4 cut(s) | 215, 287, 488, 501 |
| Ama87I | CYCGRG | 1 cut(s) | 1344 |
| AoxI | GGCC | 4 cut(s) | 619, 741, 1746, 1974 |
| ApeKI | GCWGC | 5 cut(s) | 749, 1089, 1862, 2012, 2075 |
| ApoI | RAATTY | 3 cut(s) | 842, 1102, 2041 |
| Asp718I | GGTACC | 1 cut(s) | 804 |
| AspLEI | GCGC | 1 cut(s) | 1756 |
| AspS9I | GGNCC | 1 cut(s) | 741 |
| AsuC2I | CCSGG | 2 cut(s) | 745, 968 |
| AsuHPI | GGTGA | 7 cut(s) | 149, 444, 491, 1403, 1550, 1655, 2044 |
| AvaI | CYCGRG | 1 cut(s) | 1344 |
| BalI | TGGCCA | 1 cut(s) | 621 |
| BamHI | GGATCC | 1 cut(s) | 493 |
| BanI | GGYRCC | 2 cut(s) | 804, 1517 |
| BanII | GRGCYC | 1 cut(s) | 1589 |
| BbsI | GAAGAC | 1 cut(s) | 158 |
| Bbv12I | GWGCWC | 2 cut(s) | 1511, 1589 |
| BbvI | GCAGC | 5 cut(s) | 736, 1076, 1849, 2024, 2062 |
| BccI | CCATC | 5 cut(s) | 68, 878, 911, 1450, 1454 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1014, 1048 |
| BciT130I | CCWGG | 4 cut(s) | 88, 225, 1641, 2068 |
| BcnI | CCSGG | 2 cut(s) | 745, 968 |
| BcoDI | GTCTC | 8 cut(s) | 725, 1033, 1219, 1248, 1267, 1392, 1630, 2029 |
| BfaI | CTAG | 7 cut(s) | 159, 462, 510, 669, 780, 1580, 2001 |
| BfmI | CTRYAG | 2 cut(s) | 597, 1383 |
| BfuAI | ACCTGC | 1 cut(s) | 604 |
| BglII | AGATCT | 4 cut(s) | 1294, 1387, 1423, 1768 |
| BisI | GCNGC | 5 cut(s) | 750, 1090, 1863, 2013, 2076 |
| BlsI | GCNGC | 5 cut(s) | 751, 1091, 1864, 2014, 2077 |
| BmcAI | AGTACT | 3 cut(s) | 943, 1052, 1997 |
| Bme1390I | CCNGG | 6 cut(s) | 88, 225, 745, 968, 1641, 2068 |
| BmeT110I | CYCGRG | 1 cut(s) | 1344 |
| BmgBI | CACGTC | 2 cut(s) | 787, 1438 |
| BmgT120I | GGNCC | 1 cut(s) | 741 |
| BmiI | GGNNCC | 3 cut(s) | 495, 806, 1519 |
| BmrFI | CCNGG | 6 cut(s) | 88, 225, 745, 968, 1641, 2068 |
| BmsI | GCATC | 2 cut(s) | 1465, 1999 |
| BpiI | GAAGAC | 1 cut(s) | 158 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1982, 2014 |
| BpmI | CTGGAG | 2 cut(s) | 1064, 1870 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1244 |
| BpuEI | CTTGAG | 4 cut(s) | 1105, 1275, 1497, 1757 |
| BpuMI | CCSGG | 2 cut(s) | 745, 968 |
| BsaHI | GRCGYC | 2 cut(s) | 922, 1888 |
| BsaI | GGTCTC | 1 cut(s) | 1630 |
| BsaJI | CCNNGG | 4 cut(s) | 87, 224, 744, 1570 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 549, 579 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 134 |
| Bse118I | RCCGGY | 1 cut(s) | 924 |
| Bse1I | ACTGG | 3 cut(s) | 251, 721, 1853 |
| Bse3DI | GCAATG | 2 cut(s) | 1099, 1676 |
| BseBI | CCWGG | 4 cut(s) | 88, 225, 1641, 2068 |
| BseDI | CCNNGG | 4 cut(s) | 87, 224, 744, 1570 |
| BseGI | GGATG | 2 cut(s) | 1275, 1465 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 134 |
| BseMI | GCAATG | 2 cut(s) | 1099, 1676 |
| BseMII | CTCAG | 5 cut(s) | 512, 584, 713, 898, 1258 |
| BseNI | ACTGG | 3 cut(s) | 251, 721, 1853 |
| BseRI | GAGGAG | 5 cut(s) | 644, 1021, 1277, 1362, 2006 |
| BseXI | GCAGC | 5 cut(s) | 736, 1076, 1849, 2024, 2062 |
| BsgI | GTGCAG | 1 cut(s) | 1343 |
| BshFI | GGCC | 4 cut(s) | 621, 743, 1748, 1976 |
| BshNI | GGYRCC | 2 cut(s) | 804, 1517 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1511, 1589 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1344 |
| BsiSI | CCGG | 3 cut(s) | 744, 925, 968 |
| BslFI | GGGAC | 1 cut(s) | 1424 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 134 |
| BsmAI | GTCTC | 8 cut(s) | 725, 1033, 1219, 1248, 1267, 1392, 1630, 2029 |
| BsmFI | GGGAC | 1 cut(s) | 1424 |
| BsmI | GAATGC | 1 cut(s) | 1012 |
| BsnI | GGCC | 4 cut(s) | 621, 743, 1748, 1976 |
| Bso31I | GGTCTC | 1 cut(s) | 1630 |
| BsoBI | CYCGRG | 1 cut(s) | 1344 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1511, 1589 |
| Bsp1407I | TGTACA | 1 cut(s) | 319 |
| BspACI | CCGC | 3 cut(s) | 296, 398, 1249 |
| BspANI | GGCC | 4 cut(s) | 621, 743, 1748, 1976 |
| BspCNI | CTCAG | 5 cut(s) | 513, 583, 712, 897, 1257 |
| BspLI | GGNNCC | 3 cut(s) | 495, 806, 1519 |
| BspMAI | CTGCAG | 1 cut(s) | 601 |
| BspMI | ACCTGC | 1 cut(s) | 604 |
| BspPI | GGATC | 4 cut(s) | 215, 287, 488, 501 |
| BspQI | GCTCTTC | 1 cut(s) | 2106 |
| BspT107I | GGYRCC | 2 cut(s) | 804, 1517 |
| BspTNI | GGTCTC | 1 cut(s) | 1630 |
| BsrDI | GCAATG | 2 cut(s) | 1099, 1676 |
| BsrFI | RCCGGY | 1 cut(s) | 924 |
| BsrGI | TGTACA | 1 cut(s) | 319 |
| BsrI | ACTGG | 3 cut(s) | 251, 721, 1853 |
| BssAI | RCCGGY | 1 cut(s) | 924 |
| BssECI | CCNNGG | 4 cut(s) | 87, 224, 744, 1570 |
| BssNI | GRCGYC | 2 cut(s) | 922, 1888 |
| Bst2UI | CCWGG | 4 cut(s) | 88, 225, 1641, 2068 |
| Bst4CI | ACNGT | 8 cut(s) | 132, 335, 616, 825, 941, 1222, 1723, 1952 |
| Bst6I | CTCTTC | 3 cut(s) | 1895, 2083, 2106 |
| BstACI | GRCGYC | 2 cut(s) | 922, 1888 |
| BstAUI | TGTACA | 1 cut(s) | 319 |
| BstC8I | GCNNGC | 6 cut(s) | 926, 1114, 1338, 1487, 1867, 2031 |
| BstEII | GGTNACC | 2 cut(s) | 1538, 2050 |
| BstF5I | GGATG | 2 cut(s) | 1275, 1465 |
| BstHHI | GCGC | 1 cut(s) | 1756 |
| BstMAI | GTCTC | 8 cut(s) | 725, 1033, 1219, 1248, 1267, 1392, 1630, 2029 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 749, 1321, 1515, 1760, 1973, 2021, 2030, 2113 |
| BstNI | CCWGG | 4 cut(s) | 88, 225, 1641, 2068 |
| BstNSI | RCATGY | 3 cut(s) | 384, 775, 1869 |
| BstPI | GGTNACC | 2 cut(s) | 1538, 2050 |
| BstSCI | CCNGG | 6 cut(s) | 86, 223, 743, 966, 1639, 2066 |
| BstSFI | CTRYAG | 2 cut(s) | 597, 1383 |
| BstV1I | GCAGC | 5 cut(s) | 736, 1076, 1849, 2024, 2062 |
| BstV2I | GAAGAC | 1 cut(s) | 158 |
| BstX2I | RGATCY | 5 cut(s) | 493, 1294, 1387, 1423, 1768 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 721 |
| BstYI | RGATCY | 5 cut(s) | 493, 1294, 1387, 1423, 1768 |
| BsuRI | GGCC | 4 cut(s) | 621, 743, 1748, 1976 |
| BtrI | CACGTC | 2 cut(s) | 787, 1438 |
| BtsCI | GGATG | 2 cut(s) | 1275, 1465 |
| BtsI | GCAGTG | 1 cut(s) | 935 |
| BtsIMutI | CAGTG | 7 cut(s) | 128, 612, 714, 935, 1010, 1218, 1846 |
| BveI | ACCTGC | 1 cut(s) | 604 |
| Cac8I | GCNNGC | 6 cut(s) | 926, 1114, 1338, 1487, 1867, 2031 |
| CfoI | GCGC | 1 cut(s) | 1756 |
| Cfr10I | RCCGGY | 1 cut(s) | 924 |
| Cfr13I | GGNCC | 1 cut(s) | 741 |
| CseI | GACGC | 2 cut(s) | 930, 1877 |
| CsiI | ACCWGGT | 1 cut(s) | 1639 |
| Csp6I | GTAC | 7 cut(s) | 320, 390, 805, 942, 1051, 1327, 1996 |
| CviAII | CATG | 6 cut(s) | 194, 381, 772, 801, 1866, 1927 |
| CviQI | GTAC | 7 cut(s) | 320, 390, 805, 942, 1051, 1327, 1996 |
| EaeI | YGGCCR | 1 cut(s) | 619 |
| Eam1104I | CTCTTC | 3 cut(s) | 1895, 2083, 2106 |
| EarI | CTCTTC | 3 cut(s) | 1895, 2083, 2106 |
| EciI | GGCGGA | 1 cut(s) | 1264 |
| Ecl136II | GAGCTC | 1 cut(s) | 1587 |
| Eco147I | AGGCCT | 1 cut(s) | 1748 |
| Eco24I | GRGCYC | 1 cut(s) | 1589 |
| Eco31I | GGTCTC | 1 cut(s) | 1630 |
| Eco53kI | GAGCTC | 1 cut(s) | 1587 |
| Eco57I | CTGAAG | 1 cut(s) | 2130 |
| Eco88I | CYCGRG | 1 cut(s) | 1344 |
| Eco91I | GGTNACC | 2 cut(s) | 1538, 2050 |
| EcoICRI | GAGCTC | 1 cut(s) | 1587 |
| EcoO65I | GGTNACC | 2 cut(s) | 1538, 2050 |
| EcoRII | CCWGG | 4 cut(s) | 86, 223, 1639, 2066 |
| EcoT38I | GRGCYC | 1 cut(s) | 1589 |
| FaeI | CATG | 6 cut(s) | 197, 384, 775, 804, 1869, 1930 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1650, 1682 |
| FaqI | GGGAC | 1 cut(s) | 1424 |
| FatI | CATG | 6 cut(s) | 193, 380, 771, 800, 1865, 1926 |
| FauNDI | CATATG | 2 cut(s) | 581, 1481 |
| Fnu4HI | GCNGC | 5 cut(s) | 750, 1090, 1863, 2013, 2076 |
| FokI | GGATG | 2 cut(s) | 1282, 1472 |
| FriOI | GRGCYC | 1 cut(s) | 1589 |
| Fsp4HI | GCNGC | 5 cut(s) | 750, 1090, 1863, 2013, 2076 |
| FspBI | CTAG | 7 cut(s) | 159, 462, 510, 669, 780, 1580, 2001 |
| GlaI | GCGC | 1 cut(s) | 1755 |
| GluI | GCNGC | 5 cut(s) | 750, 1090, 1863, 2013, 2076 |
| GsuI | CTGGAG | 2 cut(s) | 1064, 1870 |
| HaeIII | GGCC | 4 cut(s) | 621, 743, 1748, 1976 |
| HapII | CCGG | 3 cut(s) | 744, 925, 968 |
| HgaI | GACGC | 2 cut(s) | 930, 1877 |
| HhaI | GCGC | 1 cut(s) | 1756 |
| Hin1I | GRCGYC | 2 cut(s) | 922, 1888 |
| Hin1II | CATG | 6 cut(s) | 197, 384, 775, 804, 1869, 1930 |
| Hin6I | GCGC | 1 cut(s) | 1754 |
| HinP1I | GCGC | 1 cut(s) | 1754 |
| HincII | GTYRAC | 1 cut(s) | 1466 |
| HindII | GTYRAC | 1 cut(s) | 1466 |
| HindIII | AAGCTT | 1 cut(s) | 19 |
| HinfI | GANTC | 6 cut(s) | 154, 1227, 1361, 1833, 1918, 1934 |
| HpaII | CCGG | 3 cut(s) | 744, 925, 968 |
| HphI | GGTGA | 7 cut(s) | 149, 444, 491, 1403, 1550, 1655, 2044 |
| Hpy166II | GTNNAC | 2 cut(s) | 482, 1466 |
| Hpy188III | TCNNGA | 7 cut(s) | 218, 510, 1043, 1292, 1397, 1532, 1897 |
| Hpy8I | GTNNAC | 2 cut(s) | 482, 1466 |
| Hpy99I | CGWCG | 3 cut(s) | 1039, 1398, 1800 |
| HpyAV | CCTTC | 4 cut(s) | 320, 507, 1529, 1716 |
| HpyCH4III | ACNGT | 8 cut(s) | 132, 335, 616, 825, 941, 1222, 1723, 1952 |
| HpyCH4IV | ACGT | 4 cut(s) | 786, 1306, 1408, 1437 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 749, 1321, 1515, 1760, 1973, 2021, 2030, 2113 |
| HpySE526I | ACGT | 4 cut(s) | 786, 1306, 1408, 1437 |
| Hsp92I | GRCGYC | 2 cut(s) | 922, 1888 |
| Hsp92II | CATG | 6 cut(s) | 197, 384, 775, 804, 1869, 1930 |
| HspAI | GCGC | 1 cut(s) | 1754 |
| KpnI | GGTACC | 1 cut(s) | 808 |
| KroI | GCCGGC | 1 cut(s) | 924 |
| KroNI | GCCGGC | 1 cut(s) | 926 |
| LguI | GCTCTTC | 1 cut(s) | 2106 |
| LmnI | GCTCC | 1 cut(s) | 614 |
| Lsp1109I | GCAGC | 5 cut(s) | 736, 1076, 1849, 2024, 2062 |
| LweI | GCATC | 2 cut(s) | 1465, 1999 |
| MabI | ACCWGGT | 1 cut(s) | 1639 |
| MaeI | CTAG | 7 cut(s) | 159, 462, 510, 669, 780, 1580, 2001 |
| MaeII | ACGT | 4 cut(s) | 786, 1306, 1408, 1437 |
| MfeI | CAATTG | 1 cut(s) | 816 |
| MflI | RGATCY | 5 cut(s) | 493, 1294, 1387, 1423, 1768 |
| MhlI | GDGCHC | 2 cut(s) | 1511, 1589 |
| MlsI | TGGCCA | 1 cut(s) | 621 |
| MluNI | TGGCCA | 1 cut(s) | 621 |
| MlyI | GAGTC | 3 cut(s) | 148, 1221, 1943 |
| MmeI | TCCRAC | 1 cut(s) | 1586 |
| Mox20I | TGGCCA | 1 cut(s) | 621 |
| MroNI | GCCGGC | 1 cut(s) | 924 |
| MscI | TGGCCA | 1 cut(s) | 621 |
| MseI | TTAA | 4 cut(s) | 119, 174, 603, 1184 |
| MslI | CAYNNNNRTG | 3 cut(s) | 327, 719, 1553 |
| Msp20I | TGGCCA | 1 cut(s) | 621 |
| MspA1I | CMGCKG | 1 cut(s) | 298 |
| MspI | CCGG | 3 cut(s) | 744, 925, 968 |
| MspR9I | CCNGG | 6 cut(s) | 88, 225, 745, 968, 1641, 2068 |
| MunI | CAATTG | 1 cut(s) | 816 |
| Mva1269I | GAATGC | 1 cut(s) | 1012 |
| MvaI | CCWGG | 4 cut(s) | 88, 225, 1641, 2068 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 749, 1321, 1515, 1760, 1973, 2021, 2030, 2113 |
| NaeI | GCCGGC | 1 cut(s) | 926 |
| NciI | CCSGG | 2 cut(s) | 745, 968 |
| NdeI | CATATG | 2 cut(s) | 581, 1481 |
| NgoMIV | GCCGGC | 1 cut(s) | 924 |
| NlaIII | CATG | 6 cut(s) | 197, 384, 775, 804, 1869, 1930 |
| NlaIV | GGNNCC | 3 cut(s) | 495, 806, 1519 |
| NmuCI | GTSAC | 9 cut(s) | 98, 230, 376, 782, 1409, 1538, 1546, 1952, 2050 |
| NspI | RCATGY | 3 cut(s) | 384, 775, 1869 |
| OliI | CACNNNNGTG | 1 cut(s) | 719 |
| PaeI | GCATGC | 1 cut(s) | 1869 |
| PaeR7I | CTCGAG | 1 cut(s) | 1344 |
| PceI | AGGCCT | 1 cut(s) | 1748 |
| PciI | ACATGT | 2 cut(s) | 380, 771 |
| PciSI | GCTCTTC | 1 cut(s) | 2106 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1312 |
| PctI | GAATGC | 1 cut(s) | 1012 |
| PdiI | GCCGGC | 1 cut(s) | 926 |
| PfeI | GAWTC | 3 cut(s) | 1361, 1833, 1918 |
| PflFI | GACNNNGTC | 1 cut(s) | 1544 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 134 |
| PkrI | GCNGC | 5 cut(s) | 751, 1091, 1864, 2014, 2077 |
| PleI | GAGTC | 3 cut(s) | 148, 1221, 1942 |
| PpsI | GAGTC | 3 cut(s) | 148, 1221, 1942 |
| PscI | ACATGT | 2 cut(s) | 380, 771 |
| PsiI | TTATAA | 1 cut(s) | 57 |
| Psp124BI | GAGCTC | 1 cut(s) | 1589 |
| Psp6I | CCWGG | 4 cut(s) | 86, 223, 1639, 2066 |
| PspEI | GGTNACC | 2 cut(s) | 1538, 2050 |
| PspGI | CCWGG | 4 cut(s) | 86, 223, 1639, 2066 |
| PspN4I | GGNNCC | 3 cut(s) | 495, 806, 1519 |
| PspPI | GGNCC | 1 cut(s) | 741 |
| PspXI | VCTCGAGB | 1 cut(s) | 1344 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 633, 665 |
| PstI | CTGCAG | 1 cut(s) | 601 |
| PsuI | RGATCY | 5 cut(s) | 493, 1294, 1387, 1423, 1768 |
| PsyI | GACNNNGTC | 1 cut(s) | 1544 |
| RsaI | GTAC | 7 cut(s) | 321, 391, 806, 943, 1052, 1328, 1997 |
| RsaNI | GTAC | 7 cut(s) | 320, 390, 805, 942, 1051, 1327, 1996 |
| RseI | CAYNNNNRTG | 3 cut(s) | 327, 719, 1553 |
| SacI | GAGCTC | 1 cut(s) | 1589 |
| SapI | GCTCTTC | 1 cut(s) | 2106 |
| SaqAI | TTAA | 4 cut(s) | 119, 174, 603, 1184 |
| SatI | GCNGC | 5 cut(s) | 750, 1090, 1863, 2013, 2076 |
| Sau96I | GGNCC | 1 cut(s) | 741 |
| ScaI | AGTACT | 3 cut(s) | 943, 1052, 1997 |
| SchI | GAGTC | 3 cut(s) | 148, 1221, 1943 |
| ScrFI | CCNGG | 6 cut(s) | 88, 225, 745, 968, 1641, 2068 |
| SduI | GDGCHC | 2 cut(s) | 1511, 1589 |
| SexAI | ACCWGGT | 1 cut(s) | 1639 |
| SfaNI | GCATC | 2 cut(s) | 1465, 1999 |
| SfcI | CTRYAG | 2 cut(s) | 597, 1383 |
| Sfr274I | CTCGAG | 1 cut(s) | 1344 |
| SlaI | CTCGAG | 1 cut(s) | 1344 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 327, 719, 1553 |
| SmlI | CTYRAG | 5 cut(s) | 1084, 1290, 1344, 1512, 1772 |
| SmoI | CTYRAG | 5 cut(s) | 1084, 1290, 1344, 1512, 1772 |
| SphI | GCATGC | 1 cut(s) | 1869 |
| SseBI | AGGCCT | 1 cut(s) | 1748 |
| SsiI | CCGC | 3 cut(s) | 296, 398, 1249 |
| SspMI | CTAG | 7 cut(s) | 159, 462, 510, 669, 780, 1580, 2001 |
| SstI | GAGCTC | 1 cut(s) | 1589 |
| StuI | AGGCCT | 1 cut(s) | 1748 |
| StyD4I | CCNGG | 6 cut(s) | 86, 223, 743, 966, 1639, 2066 |
| TaaI | ACNGT | 8 cut(s) | 132, 335, 616, 825, 941, 1222, 1723, 1952 |
| TaiI | ACGT | 4 cut(s) | 789, 1309, 1411, 1440 |
| TaqI | TCGA | 7 cut(s) | 434, 1230, 1345, 1396, 1432, 1531, 1795 |
| TatI | WGTACW | 5 cut(s) | 319, 941, 1050, 1326, 1995 |
| TfiI | GAWTC | 3 cut(s) | 1361, 1833, 1918 |
| Tru1I | TTAA | 4 cut(s) | 119, 174, 603, 1184 |
| Tru9I | TTAA | 4 cut(s) | 119, 174, 603, 1184 |
| TscAI | CASTG | 7 cut(s) | 135, 619, 721, 935, 1017, 1225, 1853 |
| TseFI | GTSAC | 9 cut(s) | 98, 230, 376, 782, 1409, 1538, 1546, 1952, 2050 |
| TseI | GCWGC | 5 cut(s) | 749, 1089, 1862, 2012, 2075 |
| Tsp45I | GTSAC | 9 cut(s) | 98, 230, 376, 782, 1409, 1538, 1546, 1952, 2050 |
| TspRI | CASTG | 7 cut(s) | 135, 619, 721, 935, 1017, 1225, 1853 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1544 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 134 |
| XapI | RAATTY | 3 cut(s) | 842, 1102, 2041 |
| XbaI | TCTAGA | 1 cut(s) | 509 |
| XceI | RCATGY | 3 cut(s) | 384, 775, 1869 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 19 |
| XhoI | CTCGAG | 1 cut(s) | 1344 |
| XspI | CTAG | 7 cut(s) | 159, 462, 510, 669, 780, 1580, 2001 |
| ZrmI | AGTACT | 3 cut(s) | 943, 1052, 1997 |