cyclic nucleotide-gated ion channel
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g36620 |
| malus_domestica | MD15G1106000.v1.1 |
| prunus_persica | Prupe.1G457900_v2.0.a1 |
| pyrus_communis | pycom15g09630 pycom15g09650 |
| rosa_chinensis | RchiOBHm_Chr6g0305181 |
| rosa_laevigata | RLG00000010910 |
| rosa_multiflora | Rmu_sc0000061.1_g000007 Rmu_sc0000061.1_g000010 |
| rosa_roxburghii | Rroxscaffold_7G00163060 Rroxscaffold_7G00163070 |
| rosa_rugosa | Rorug06G0338300 |
| rosa_samantha | Rh6AG450000 Rh6BG451400 Rh6CG463700 Rh6CG463800 Rh6DG450600 |
| rosa_wichuraiana | Rw6G039200 Rw6G039220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 57 |
| Acc36I | ACCTGC | 1 cut(s) | 601 |
| Acc65I | GGTACC | 1 cut(s) | 801 |
| AccB1I | GGYRCC | 2 cut(s) | 801, 1430 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 134 |
| AciI | CCGC | 2 cut(s) | 1162, 1566 |
| AclWI | GGATC | 4 cut(s) | 215, 287, 488, 501 |
| AcoI | YGGCCR | 1 cut(s) | 616 |
| AcsI | RAATTY | 1 cut(s) | 1954 |
| AcuI | CTGAAG | 2 cut(s) | 300, 2073 |
| AcyI | GRCGYC | 2 cut(s) | 919, 1801 |
| AfaI | GTAC | 9 cut(s) | 321, 391, 639, 803, 940, 1049, 1241, 1423, 1910 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 134, 1840 |
| AflII | CTTAAG | 1 cut(s) | 1081 |
| AflIII | ACRYGT | 4 cut(s) | 380, 768, 1219, 1348 |
| AgsI | TTSAA | 8 cut(s) | 31, 244, 361, 907, 985, 1534, 1810, 1932 |
| AjiI | CACGTC | 1 cut(s) | 1349 |
| AjnI | CCWGG | 3 cut(s) | 86, 223, 1552 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1805, 1837 |
| AleI | CACNNNNGTG | 1 cut(s) | 716 |
| Alw21I | GWGCWC | 2 cut(s) | 1502, 2011 |
| Alw26I | GTCTC | 8 cut(s) | 846, 1030, 1132, 1161, 1180, 1305, 1543, 1942 |
| AlwI | GGATC | 4 cut(s) | 215, 287, 488, 501 |
| Ama87I | CYCGRG | 1 cut(s) | 1257 |
| AoxI | GGCC | 4 cut(s) | 616, 738, 1659, 1887 |
| ApeKI | GCWGC | 6 cut(s) | 8, 746, 1775, 1925, 1988, 2041 |
| ApoI | RAATTY | 1 cut(s) | 1954 |
| Asp718I | GGTACC | 1 cut(s) | 801 |
| AspLEI | GCGC | 1 cut(s) | 1289 |
| AspS9I | GGNCC | 1 cut(s) | 738 |
| AsuC2I | CCSGG | 2 cut(s) | 742, 965 |
| AsuHPI | GGTGA | 8 cut(s) | 149, 444, 491, 1123, 1453, 1463, 1568, 1957 |
| AvaI | CYCGRG | 1 cut(s) | 1257 |
| BalI | TGGCCA | 1 cut(s) | 618 |
| BamHI | GGATCC | 1 cut(s) | 493 |
| BanI | GGYRCC | 2 cut(s) | 801, 1430 |
| BanII | GRGCYC | 2 cut(s) | 1502, 2011 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1912, 1944 |
| BauI | CACGAG | 1 cut(s) | 1996 |
| BbsI | GAAGAC | 1 cut(s) | 158 |
| Bbv12I | GWGCWC | 2 cut(s) | 1502, 2011 |
| BbvI | GCAGC | 5 cut(s) | 733, 1762, 1937, 1975, 2028 |
| BccI | CCATC | 6 cut(s) | 68, 875, 908, 1286, 1363, 1367 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 806, 840 |
| BciT130I | CCWGG | 3 cut(s) | 88, 225, 1554 |
| BciVI | GTATCC | 1 cut(s) | 1420 |
| BcnI | CCSGG | 2 cut(s) | 742, 965 |
| BcoDI | GTCTC | 8 cut(s) | 846, 1030, 1132, 1161, 1180, 1305, 1543, 1942 |
| BfaI | CTAG | 9 cut(s) | 44, 159, 462, 510, 666, 777, 1040, 1914, 2089 |
| BfmI | CTRYAG | 2 cut(s) | 594, 1296 |
| BfrI | CTTAAG | 1 cut(s) | 1081 |
| BfuAI | ACCTGC | 1 cut(s) | 601 |
| BfuI | GTATCC | 1 cut(s) | 1420 |
| BglII | AGATCT | 4 cut(s) | 541, 1207, 1300, 1681 |
| BisI | GCNGC | 8 cut(s) | 9, 747, 1163, 1567, 1776, 1926, 1989, 2042 |
| BlsI | GCNGC | 8 cut(s) | 10, 748, 1164, 1568, 1777, 1927, 1990, 2043 |
| BmcAI | AGTACT | 4 cut(s) | 940, 1049, 1423, 1910 |
| Bme1390I | CCNGG | 5 cut(s) | 88, 225, 742, 965, 1554 |
| BmeT110I | CYCGRG | 1 cut(s) | 1257 |
| BmgBI | CACGTC | 1 cut(s) | 1349 |
| BmgT120I | GGNCC | 1 cut(s) | 738 |
| BmiI | GGNNCC | 3 cut(s) | 495, 803, 1432 |
| BmrFI | CCNGG | 5 cut(s) | 88, 225, 742, 965, 1554 |
| BmsI | GCATC | 1 cut(s) | 1378 |
| BpiI | GAAGAC | 1 cut(s) | 158 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1895, 1927 |
| BpmI | CTGGAG | 2 cut(s) | 592, 1783 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1157, 1835 |
| BpuEI | CTTGAG | 5 cut(s) | 1163, 1188, 1410, 1438, 1670 |
| BpuMI | CCSGG | 2 cut(s) | 742, 965 |
| BsaHI | GRCGYC | 2 cut(s) | 919, 1801 |
| BsaI | GGTCTC | 1 cut(s) | 1543 |
| BsaJI | CCNNGG | 4 cut(s) | 87, 224, 741, 1483 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 546, 576 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 134, 1840 |
| Bse1I | ACTGG | 3 cut(s) | 609, 718, 1766 |
| Bse3DI | GCAATG | 2 cut(s) | 932, 1589 |
| BseBI | CCWGG | 3 cut(s) | 88, 225, 1554 |
| BseDI | CCNNGG | 4 cut(s) | 87, 224, 741, 1483 |
| BseGI | GGATG | 5 cut(s) | 1188, 1314, 1378, 1885, 2029 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 134, 1840 |
| BseMI | GCAATG | 2 cut(s) | 932, 1589 |
| BseMII | CTCAG | 7 cut(s) | 512, 581, 710, 895, 1171, 2024, 2082 |
| BseNI | ACTGG | 3 cut(s) | 609, 718, 1766 |
| BseRI | GAGGAG | 6 cut(s) | 1018, 1021, 1190, 1275, 1919, 2019 |
| BseXI | GCAGC | 5 cut(s) | 733, 1762, 1937, 1975, 2028 |
| BsgI | GTGCAG | 2 cut(s) | 1130, 1256 |
| BshFI | GGCC | 4 cut(s) | 618, 740, 1661, 1889 |
| BshNI | GGYRCC | 2 cut(s) | 801, 1430 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1502, 2011 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1257 |
| BsiSI | CCGG | 2 cut(s) | 741, 965 |
| BslFI | GGGAC | 1 cut(s) | 1337 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 134, 1840 |
| BsmAI | GTCTC | 8 cut(s) | 846, 1030, 1132, 1161, 1180, 1305, 1543, 1942 |
| BsmFI | GGGAC | 1 cut(s) | 1337 |
| BsmI | GAATGC | 1 cut(s) | 1009 |
| BsnI | GGCC | 4 cut(s) | 618, 740, 1661, 1889 |
| Bso31I | GGTCTC | 1 cut(s) | 1543 |
| BsoBI | CYCGRG | 1 cut(s) | 1257 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1502, 2011 |
| BspACI | CCGC | 2 cut(s) | 1162, 1566 |
| BspANI | GGCC | 4 cut(s) | 618, 740, 1661, 1889 |
| BspCNI | CTCAG | 7 cut(s) | 513, 580, 709, 894, 1170, 2023, 2081 |
| BspLI | GGNNCC | 3 cut(s) | 495, 803, 1432 |
| BspMAI | CTGCAG | 2 cut(s) | 598, 1300 |
| BspMI | ACCTGC | 1 cut(s) | 601 |
| BspPI | GGATC | 4 cut(s) | 215, 287, 488, 501 |
| BspQI | GCTCTTC | 1 cut(s) | 2049 |
| BspT107I | GGYRCC | 2 cut(s) | 801, 1430 |
| BspTI | CTTAAG | 1 cut(s) | 1081 |
| BspTNI | GGTCTC | 1 cut(s) | 1543 |
| BsrDI | GCAATG | 2 cut(s) | 932, 1589 |
| BsrI | ACTGG | 3 cut(s) | 609, 718, 1766 |
| BssECI | CCNNGG | 4 cut(s) | 87, 224, 741, 1483 |
| BssNI | GRCGYC | 2 cut(s) | 919, 1801 |
| BssSI | CACGAG | 1 cut(s) | 1996 |
| Bst2BI | CACGAG | 1 cut(s) | 1996 |
| Bst2UI | CCWGG | 3 cut(s) | 88, 225, 1554 |
| Bst4CI | ACNGT | 8 cut(s) | 132, 300, 335, 822, 938, 1135, 1636, 1865 |
| Bst6I | CTCTTC | 3 cut(s) | 1808, 1996, 2049 |
| BstACI | GRCGYC | 2 cut(s) | 919, 1801 |
| BstAFI | CTTAAG | 1 cut(s) | 1081 |
| BstC8I | GCNNGC | 5 cut(s) | 923, 1251, 1296, 1400, 1581 |
| BstEII | GGTNACC | 2 cut(s) | 1451, 1963 |
| BstF5I | GGATG | 5 cut(s) | 1188, 1314, 1378, 1885, 2029 |
| BstHHI | GCGC | 1 cut(s) | 1289 |
| BstMAI | GTCTC | 8 cut(s) | 846, 1030, 1132, 1161, 1180, 1305, 1543, 1942 |
| BstNI | CCWGG | 3 cut(s) | 88, 225, 1554 |
| BstNSI | RCATGY | 4 cut(s) | 384, 406, 772, 1782 |
| BstPI | GGTNACC | 2 cut(s) | 1451, 1963 |
| BstSCI | CCNGG | 5 cut(s) | 86, 223, 740, 963, 1552 |
| BstSFI | CTRYAG | 2 cut(s) | 594, 1296 |
| BstV1I | GCAGC | 5 cut(s) | 733, 1762, 1937, 1975, 2028 |
| BstV2I | GAAGAC | 1 cut(s) | 158 |
| BstX2I | RGATCY | 5 cut(s) | 493, 541, 1207, 1300, 1681 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 718 |
| BstYI | RGATCY | 5 cut(s) | 493, 541, 1207, 1300, 1681 |
| BsuI | GTATCC | 1 cut(s) | 1420 |
| BsuRI | GGCC | 4 cut(s) | 618, 740, 1661, 1889 |
| BtrI | CACGTC | 1 cut(s) | 1349 |
| BtsCI | GGATG | 5 cut(s) | 1188, 1314, 1378, 1885, 2029 |
| BtsI | GCAGTG | 1 cut(s) | 554 |
| BtsIMutI | CAGTG | 6 cut(s) | 128, 296, 554, 711, 1007, 1759 |
| BveI | ACCTGC | 1 cut(s) | 601 |
| Cac8I | GCNNGC | 5 cut(s) | 923, 1251, 1296, 1400, 1581 |
| CfoI | GCGC | 1 cut(s) | 1289 |
| Cfr13I | GGNCC | 1 cut(s) | 738 |
| CseI | GACGC | 2 cut(s) | 927, 1790 |
| CsiI | ACCWGGT | 1 cut(s) | 1552 |
| Csp6I | GTAC | 9 cut(s) | 320, 390, 638, 802, 939, 1048, 1240, 1422, 1909 |
| CviQI | GTAC | 9 cut(s) | 320, 390, 638, 802, 939, 1048, 1240, 1422, 1909 |
| EaeI | YGGCCR | 1 cut(s) | 616 |
| Eam1104I | CTCTTC | 3 cut(s) | 1808, 1996, 2049 |
| EarI | CTCTTC | 3 cut(s) | 1808, 1996, 2049 |
| Ecl136II | GAGCTC | 2 cut(s) | 1500, 2009 |
| Eco147I | AGGCCT | 1 cut(s) | 1661 |
| Eco24I | GRGCYC | 2 cut(s) | 1502, 2011 |
| Eco31I | GGTCTC | 1 cut(s) | 1543 |
| Eco53kI | GAGCTC | 2 cut(s) | 1500, 2009 |
| Eco57I | CTGAAG | 2 cut(s) | 300, 2073 |
| Eco88I | CYCGRG | 1 cut(s) | 1257 |
| Eco91I | GGTNACC | 2 cut(s) | 1451, 1963 |
| EcoICRI | GAGCTC | 2 cut(s) | 1500, 2009 |
| EcoO65I | GGTNACC | 2 cut(s) | 1451, 1963 |
| EcoRII | CCWGG | 3 cut(s) | 86, 223, 1552 |
| EcoT38I | GRGCYC | 2 cut(s) | 1502, 2011 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1563, 1595 |
| FaqI | GGGAC | 1 cut(s) | 1337 |
| FauNDI | CATATG | 2 cut(s) | 578, 1394 |
| Fnu4HI | GCNGC | 8 cut(s) | 9, 747, 1163, 1567, 1776, 1926, 1989, 2042 |
| FokI | GGATG | 5 cut(s) | 1195, 1301, 1385, 1892, 2036 |
| FriOI | GRGCYC | 2 cut(s) | 1502, 2011 |
| Fsp4HI | GCNGC | 8 cut(s) | 9, 747, 1163, 1567, 1776, 1926, 1989, 2042 |
| FspBI | CTAG | 9 cut(s) | 44, 159, 462, 510, 666, 777, 1040, 1914, 2089 |
| GlaI | GCGC | 1 cut(s) | 1288 |
| GluI | GCNGC | 8 cut(s) | 9, 747, 1163, 1567, 1776, 1926, 1989, 2042 |
| GsuI | CTGGAG | 2 cut(s) | 592, 1783 |
| HaeIII | GGCC | 4 cut(s) | 618, 740, 1661, 1889 |
| HapII | CCGG | 2 cut(s) | 741, 965 |
| HgaI | GACGC | 2 cut(s) | 927, 1790 |
| HhaI | GCGC | 1 cut(s) | 1289 |
| Hin1I | GRCGYC | 2 cut(s) | 919, 1801 |
| Hin6I | GCGC | 1 cut(s) | 1287 |
| HinP1I | GCGC | 1 cut(s) | 1287 |
| HincII | GTYRAC | 1 cut(s) | 862 |
| HindII | GTYRAC | 1 cut(s) | 862 |
| HinfI | GANTC | 4 cut(s) | 1274, 1746, 1806, 1847 |
| HpaII | CCGG | 2 cut(s) | 741, 965 |
| HphI | GGTGA | 8 cut(s) | 149, 444, 491, 1123, 1453, 1463, 1568, 1957 |
| Hpy166II | GTNNAC | 2 cut(s) | 482, 862 |
| Hpy188III | TCNNGA | 7 cut(s) | 218, 241, 1040, 1205, 1310, 1445, 1810 |
| Hpy8I | GTNNAC | 2 cut(s) | 482, 862 |
| Hpy99I | CGWCG | 4 cut(s) | 1311, 1350, 1713, 1806 |
| HpyAV | CCTTC | 6 cut(s) | 320, 324, 507, 1442, 1629, 2014 |
| HpyCH4III | ACNGT | 8 cut(s) | 132, 300, 335, 822, 938, 1135, 1636, 1865 |
| HpyCH4IV | ACGT | 3 cut(s) | 1219, 1321, 1348 |
| HpySE526I | ACGT | 3 cut(s) | 1219, 1321, 1348 |
| Hsp92I | GRCGYC | 2 cut(s) | 919, 1801 |
| HspAI | GCGC | 1 cut(s) | 1287 |
| KpnI | GGTACC | 1 cut(s) | 805 |
| LguI | GCTCTTC | 1 cut(s) | 2049 |
| LmnI | GCTCC | 3 cut(s) | 611, 657, 2006 |
| Lsp1109I | GCAGC | 5 cut(s) | 733, 1762, 1937, 1975, 2028 |
| LweI | GCATC | 1 cut(s) | 1378 |
| MabI | ACCWGGT | 1 cut(s) | 1552 |
| MaeI | CTAG | 9 cut(s) | 44, 159, 462, 510, 666, 777, 1040, 1914, 2089 |
| MaeII | ACGT | 3 cut(s) | 1219, 1321, 1348 |
| MaeIII | GTNAC | 8 cut(s) | 98, 376, 721, 953, 1451, 1459, 1865, 1963 |
| MflI | RGATCY | 5 cut(s) | 493, 541, 1207, 1300, 1681 |
| MhlI | GDGCHC | 2 cut(s) | 1502, 2011 |
| MlsI | TGGCCA | 1 cut(s) | 618 |
| MluCI | AATT | 6 cut(s) | 79, 369, 985, 1539, 1574, 1954 |
| MluNI | TGGCCA | 1 cut(s) | 618 |
| MlyI | GAGTC | 1 cut(s) | 1856 |
| MmeI | TCCRAC | 3 cut(s) | 1342, 1499, 1732 |
| Mox20I | TGGCCA | 1 cut(s) | 618 |
| MscI | TGGCCA | 1 cut(s) | 618 |
| MseI | TTAA | 4 cut(s) | 119, 174, 600, 1082 |
| MslI | CAYNNNNRTG | 3 cut(s) | 327, 716, 1466 |
| Msp20I | TGGCCA | 1 cut(s) | 618 |
| MspCI | CTTAAG | 1 cut(s) | 1081 |
| MspI | CCGG | 2 cut(s) | 741, 965 |
| MspR9I | CCNGG | 5 cut(s) | 88, 225, 742, 965, 1554 |
| Mva1269I | GAATGC | 1 cut(s) | 1009 |
| MvaI | CCWGG | 3 cut(s) | 88, 225, 1554 |
| NciI | CCSGG | 2 cut(s) | 742, 965 |
| NdeI | CATATG | 2 cut(s) | 578, 1394 |
| NlaIV | GGNNCC | 3 cut(s) | 495, 803, 1432 |
| NmuCI | GTSAC | 7 cut(s) | 98, 376, 721, 1451, 1459, 1865, 1963 |
| NspI | RCATGY | 4 cut(s) | 384, 406, 772, 1782 |
| OliI | CACNNNNGTG | 1 cut(s) | 716 |
| PaeR7I | CTCGAG | 1 cut(s) | 1257 |
| PceI | AGGCCT | 1 cut(s) | 1661 |
| PciI | ACATGT | 2 cut(s) | 380, 768 |
| PciSI | GCTCTTC | 1 cut(s) | 2049 |
| PctI | GAATGC | 1 cut(s) | 1009 |
| PfeI | GAWTC | 3 cut(s) | 1274, 1746, 1806 |
| PflFI | GACNNNGTC | 1 cut(s) | 1457 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 134 |
| PkrI | GCNGC | 8 cut(s) | 10, 748, 1164, 1568, 1777, 1927, 1990, 2043 |
| PleI | GAGTC | 1 cut(s) | 1855 |
| PpsI | GAGTC | 1 cut(s) | 1855 |
| PscI | ACATGT | 2 cut(s) | 380, 768 |
| PsiI | TTATAA | 1 cut(s) | 57 |
| Psp124BI | GAGCTC | 2 cut(s) | 1502, 2011 |
| Psp6I | CCWGG | 3 cut(s) | 86, 223, 1552 |
| PspEI | GGTNACC | 2 cut(s) | 1451, 1963 |
| PspGI | CCWGG | 3 cut(s) | 86, 223, 1552 |
| PspN4I | GGNNCC | 3 cut(s) | 495, 803, 1432 |
| PspPI | GGNCC | 1 cut(s) | 738 |
| PspXI | VCTCGAGB | 1 cut(s) | 1257 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 630, 662 |
| PstI | CTGCAG | 2 cut(s) | 598, 1300 |
| PsuI | RGATCY | 5 cut(s) | 493, 541, 1207, 1300, 1681 |
| PsyI | GACNNNGTC | 1 cut(s) | 1457 |
| RsaI | GTAC | 9 cut(s) | 321, 391, 639, 803, 940, 1049, 1241, 1423, 1910 |
| RsaNI | GTAC | 9 cut(s) | 320, 390, 638, 802, 939, 1048, 1240, 1422, 1909 |
| RseI | CAYNNNNRTG | 3 cut(s) | 327, 716, 1466 |
| SacI | GAGCTC | 2 cut(s) | 1502, 2011 |
| SapI | GCTCTTC | 1 cut(s) | 2049 |
| SaqAI | TTAA | 4 cut(s) | 119, 174, 600, 1082 |
| SatI | GCNGC | 8 cut(s) | 9, 747, 1163, 1567, 1776, 1926, 1989, 2042 |
| Sau96I | GGNCC | 1 cut(s) | 738 |
| ScaI | AGTACT | 4 cut(s) | 940, 1049, 1423, 1910 |
| SchI | GAGTC | 1 cut(s) | 1856 |
| ScrFI | CCNGG | 5 cut(s) | 88, 225, 742, 965, 1554 |
| SduI | GDGCHC | 2 cut(s) | 1502, 2011 |
| SexAI | ACCWGGT | 1 cut(s) | 1552 |
| SfaNI | GCATC | 1 cut(s) | 1378 |
| SfcI | CTRYAG | 2 cut(s) | 594, 1296 |
| Sfr274I | CTCGAG | 1 cut(s) | 1257 |
| SlaI | CTCGAG | 1 cut(s) | 1257 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 327, 716, 1466 |
| SmlI | CTYRAG | 7 cut(s) | 1081, 1142, 1203, 1257, 1417, 1425, 1685 |
| SmoI | CTYRAG | 7 cut(s) | 1081, 1142, 1203, 1257, 1417, 1425, 1685 |
| Sse9I | AATT | 6 cut(s) | 79, 369, 985, 1539, 1574, 1954 |
| SseBI | AGGCCT | 1 cut(s) | 1661 |
| SsiI | CCGC | 2 cut(s) | 1162, 1566 |
| SspMI | CTAG | 9 cut(s) | 44, 159, 462, 510, 666, 777, 1040, 1914, 2089 |
| SstI | GAGCTC | 2 cut(s) | 1502, 2011 |
| StuI | AGGCCT | 1 cut(s) | 1661 |
| StyD4I | CCNGG | 5 cut(s) | 86, 223, 740, 963, 1552 |
| TaaI | ACNGT | 8 cut(s) | 132, 300, 335, 822, 938, 1135, 1636, 1865 |
| TaiI | ACGT | 3 cut(s) | 1222, 1324, 1351 |
| TaqI | TCGA | 7 cut(s) | 816, 1258, 1309, 1345, 1502, 1804, 1979 |
| TasI | AATT | 6 cut(s) | 79, 369, 985, 1539, 1574, 1954 |
| TatI | WGTACW | 7 cut(s) | 319, 637, 938, 1047, 1239, 1421, 1908 |
| TauI | GCSGC | 2 cut(s) | 1165, 1569 |
| TfiI | GAWTC | 3 cut(s) | 1274, 1746, 1806 |
| Tru1I | TTAA | 4 cut(s) | 119, 174, 600, 1082 |
| Tru9I | TTAA | 4 cut(s) | 119, 174, 600, 1082 |
| TscAI | CASTG | 6 cut(s) | 135, 303, 561, 718, 1014, 1766 |
| TseFI | GTSAC | 7 cut(s) | 98, 376, 721, 1451, 1459, 1865, 1963 |
| TseI | GCWGC | 6 cut(s) | 8, 746, 1775, 1925, 1988, 2041 |
| Tsp45I | GTSAC | 7 cut(s) | 98, 376, 721, 1451, 1459, 1865, 1963 |
| TspGWI | ACGGA | 1 cut(s) | 1295 |
| TspRI | CASTG | 6 cut(s) | 135, 303, 561, 718, 1014, 1766 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1457 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 134 |
| Vha464I | CTTAAG | 1 cut(s) | 1081 |
| XapI | RAATTY | 1 cut(s) | 1954 |
| XbaI | TCTAGA | 1 cut(s) | 1039 |
| XceI | RCATGY | 4 cut(s) | 384, 406, 772, 1782 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 19 |
| XhoI | CTCGAG | 1 cut(s) | 1257 |
| XspI | CTAG | 9 cut(s) | 44, 159, 462, 510, 666, 777, 1040, 1914, 2089 |
| ZrmI | AGTACT | 4 cut(s) | 940, 1049, 1423, 1910 |