Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0011660

Physical Location & Seq

Genomic Coordinates Forward (+)

63257340 .. 63267590

Gene Structure 10251 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G039220.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGCGATTAGAAGATAACGTACACATGCATGAGTTTTATAATGATGAGAAACAAGATGGTAATTTTTCCTGGGAAAAGAGTGACCCTACCCAAAGAAACTTAAAAGAGCCACTGTCTGGTGATAGAGCCAAGAAGACTCCTAGATTTAGGGGGTTTAAGGTTTTCCCAGAGAACCATGAGCCACATCAGAAGAAAGTTCTTGATCCTGGGAGTGATATTTTATTGAACTGGAACACGATTTTTCTCATTTCTTGCTTATTAGCGTTGTTCGTTGATCCGCTGTTTTTCTACCTTCCTTATGTACATAATGATGACAGTTCATCTTGTATGGCAATTGATTTGAAGTTGGGAATTGTTGTGACATGTTTTCGTACTCTTGCGGATACGTTCTATCTGCTAAATATGTTCATCAAGTCGAGGACAGCTTATATATCACCAAAAACTAGAGTTTTTGGGAGGGGTGAACTTGTTATGGATCCCAAAAAGATTTCTAGAAGGTATCTGAGATCATCAGATTTTTTCATAGACCTTATAGCTACACTGCCTCTCCCTCAGATTGTCATATGGTTCATCATACCTGCAGTTAAAAGCTCCACTGTTGGCCATACCCATAATGCCCTTGTAATGATTGTTCTCCTCCAATATGTTCCTAGATCGTATCTCATTTTCCCACTAAGTTCTCAGATCATCAGAGCCACTGGTGTGGTTACAGAGACAGCTTGGGCCGGGGCTGCGTATAATCTCATACTCTACATGTTAGCTAGTCACGTCTTAGGTGCTTCATGGTACCTATTTTCAATTGAACGGTATGCAACTTGCTGGAAATCTCAATGCAGAATGGAAATTGACCCCATCAAGTGTTTTCTCAGCTACTTGGATTGTGGTTCTTTGAACAATCATGGACGCCGGCAGTGGATAAACAGTACTAATGTATTTAGTAACTGCAACCCGGACAACTCCACAGGTTTCAATTATGGCATATTTCAGAATGCACTGACCAACAATGCAGTCTCCTCGTCGTTTCTGGAGAAGTACTTGTTTTGTTTCTGGTGGGGATTACAGAACTTGAGCTGCAATGGTCAGAATTTGACTGCAAGCACATTCATTGGGGAAACTTCTTTTGCTATACTTATTGCTACTATGGGTCTGGTTCTGTTTGCACACTTAATTGGAAATATGCAGACTTACTTGCAATCTATCACTGTGAGACTTGAGGAATGGAGGCTCAGGCGGAGAGACACAGAGGAGTGGATGAGACATAGGCAACTCCCTCAAGATCTGCAAGAACGTGTTAGGCGATTTGTGCAGTACAAGTGGCTTGCAACTCGAGGAGTTGATGAAGAATCAATCTTACACGCCTTGCCTACAGATCTTCGTCGAGACATCAAACGTCACCTATGTTTAGATCTTGTTCGACGCGTACCATTTTTCTCACAGATGGATGGTCAACTACTTGATGCCATATGCGAGCGTTTGGTATCTTCATTGAGCACTCAAGGCACCTACATTGTTCGAGAAGGTGACCCTGTCACAGAGATGTTACTCATTATCCGAGGAAAGCTAGAGAGCTCAACAACAAATGGAGGTCGGACAGGTTTCTTCAACTCAAATACTTTGAGACCTGGTGATTTTTGTGGGGAAGAATTGCTTGCTTGGGCATTGCTTCCCAACTCTACTCTCAACTTGCCTTCTTCTACAAGAACTGTTAGATCACTTGATGAAGTAGAGGCCTTTGCGCTTAGAGCAGAAGATCTCAAGTTTGTTGCCAATCAGTTTCGACGACTTCATAGCAAGAAGTTGCAACACACATTCCGATTCTACTCTTACCACTGGAGAACTTGGGCTGCATGCTTCATTCAGGTTGCGTGGCGTCAATTCAAGAAGAGATTGTTGGCAAAGAATCTTAGCATGGTTGAGTCATTTTCATATAACAGTGACAACCAAGAGGCTGATGAGGCCGAACAAGAAAAGGAGGAGTACTCTAGGACTGATGCAGCCTCAAATGCTTCGCAAGCGAGACAGAATTTGGGGGTCACCATTGTCGCTTCCTGGTGTGCTGCAAAGACGAGAAGAGGGCAACTGCCAAAGCCTGAAGAGCCAGACTTCTCAGTAGATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0022803 GO:0022832 GO:0022836 GO:0022838 GO:0022839 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0031224 GO:0031226 GO:0034220 GO:0042391 GO:0044425 GO:0044459 GO:0044464 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0098655 GO:0098660 GO:0098662

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Ion_trans cNMP_binding

Protein Analysis

706

Amino Acids

81.41

Weight (kDa)

8.58

Isoelectric Point (pI)

43.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ion_trans	PF00520	77 - 403	3.2e-19	Ion transport protein
cNMP_binding	PF00027	499 - 588	1.8e-07	Cyclic nucleotide-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011660)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g36620
malus_domestica	MD15G1106000.v1.1
prunus_persica	Prupe.1G457900_v2.0.a1
pyrus_communis	pycom15g09630 pycom15g09650
rosa_chinensis	RchiOBHm_Chr6g0305181
rosa_laevigata	RLG00000010910
rosa_multiflora	Rmu_sc0000061.1_g000007 Rmu_sc0000061.1_g000010
rosa_roxburghii	Rroxscaffold_7G00163060 Rroxscaffold_7G00163070
rosa_rugosa	Rorug06G0338300
rosa_samantha	Rh6AG450000 Rh6BG451400 Rh6CG463700 Rh6CG463800 Rh6DG450600
rosa_wichuraiana	Rw6G039200 Rw6G039220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	39
Acc36I	ACCTGC	1 cut(s)	586
Acc65I	GGTACC	1 cut(s)	786
AccB1I	GGYRCC	2 cut(s)	786, 1499
AccB7I	CCANNNNNTGG	1 cut(s)	116
AccII	CGCG	1 cut(s)	1419
AciI	CCGC	3 cut(s)	278, 380, 1231
AclWI	GGATC	4 cut(s)	197, 269, 470, 483
AcoI	YGGCCR	1 cut(s)	601
AcsI	RAATTY	2 cut(s)	1084, 2023
AcuI	CTGAAG	1 cut(s)	2112
AcyI	GRCGYC	2 cut(s)	904, 1870
AfaI	GTAC	9 cut(s)	21, 303, 373, 788, 925, 1034, 1310, 1422, 1979
AfiI	CCNNNNNNNGG	1 cut(s)	116
AflIII	ACRYGT	4 cut(s)	362, 753, 1288, 1417
AgsI	TTSAA	8 cut(s)	226, 343, 798, 803, 892, 970, 1603, 1879
AjiI	CACGTC	1 cut(s)	769
AjnI	CCWGG	4 cut(s)	68, 205, 1621, 2048
AjuI	GAANNNNNNNTTGG	2 cut(s)	1874, 1906
AleI	CACNNNNGTG	1 cut(s)	701
AluBI	AGCT	9 cut(s)	425, 536, 591, 719, 761, 870, 1071, 1561, 1569
AluI	AGCT	9 cut(s)	425, 536, 591, 719, 761, 870, 1071, 1561, 1569
Alw21I	GWGCWC	2 cut(s)	1493, 1571
Alw26I	GTCTC	8 cut(s)	707, 1015, 1201, 1230, 1249, 1374, 1612, 2011
AlwI	GGATC	4 cut(s)	197, 269, 470, 483
Ama87I	CYCGRG	1 cut(s)	1326
AoxI	GGCC	4 cut(s)	601, 723, 1728, 1956
ApeKI	GCWGC	5 cut(s)	731, 1071, 1844, 1994, 2057
ApoI	RAATTY	2 cut(s)	1084, 2023
Asp718I	GGTACC	1 cut(s)	786
AspLEI	GCGC	1 cut(s)	1738
AspS9I	GGNCC	1 cut(s)	723
AsuC2I	CCSGG	2 cut(s)	727, 950
AsuHPI	GGTGA	7 cut(s)	131, 426, 473, 1385, 1532, 1637, 2026
AvaI	CYCGRG	1 cut(s)	1326
BalI	TGGCCA	1 cut(s)	603
BamHI	GGATCC	1 cut(s)	475
BanI	GGYRCC	2 cut(s)	786, 1499
BanII	GRGCYC	1 cut(s)	1571
BarI	GAAGNNNNNNTAC	1 cut(s)	35
BbsI	GAAGAC	1 cut(s)	140
Bbv12I	GWGCWC	2 cut(s)	1493, 1571
BbvI	GCAGC	5 cut(s)	718, 1058, 1831, 2006, 2044
BccI	CCATC	4 cut(s)	50, 860, 1432, 1436
BcgI	CGANNNNNNTGC	2 cut(s)	996, 1030
BciT130I	CCWGG	4 cut(s)	70, 207, 1623, 2050
BciVI	GTATCC	1 cut(s)	376
BcnI	CCSGG	2 cut(s)	727, 950
BcoDI	GTCTC	8 cut(s)	707, 1015, 1201, 1230, 1249, 1374, 1612, 2011
BfaI	CTAG	8 cut(s)	141, 444, 492, 651, 762, 1562, 1983, 2119
BfmI	CTRYAG	2 cut(s)	579, 1365
BfuAI	ACCTGC	1 cut(s)	586
BfuI	GTATCC	1 cut(s)	376
BglII	AGATCT	4 cut(s)	1276, 1369, 1405, 1750
BisI	GCNGC	5 cut(s)	732, 1072, 1845, 1995, 2058
BlsI	GCNGC	5 cut(s)	733, 1073, 1846, 1996, 2059
BmcAI	AGTACT	3 cut(s)	925, 1034, 1979
Bme1390I	CCNGG	6 cut(s)	70, 207, 727, 950, 1623, 2050
BmeT110I	CYCGRG	1 cut(s)	1326
BmgBI	CACGTC	1 cut(s)	769
BmgT120I	GGNCC	1 cut(s)	723
BmiI	GGNNCC	3 cut(s)	477, 788, 1501
BmrFI	CCNGG	6 cut(s)	70, 207, 727, 950, 1623, 2050
BmsI	GCATC	2 cut(s)	1447, 1981
BpiI	GAAGAC	1 cut(s)	140
BplI	GAGNNNNNCTC	2 cut(s)	1964, 1996
BpmI	CTGGAG	2 cut(s)	1046, 1852
Bpu10I	CCTNAGC	1 cut(s)	1226
BpuEI	CTTGAG	5 cut(s)	1087, 1232, 1257, 1479, 1739
BpuMI	CCSGG	2 cut(s)	727, 950
BsaHI	GRCGYC	2 cut(s)	904, 1870
BsaI	GGTCTC	1 cut(s)	1612
BsaJI	CCNNGG	4 cut(s)	69, 206, 726, 1552
BsaXI	ACNNNNNCTCC	2 cut(s)	531, 561
Bsc4I	CCNNNNNNNGG	1 cut(s)	116
Bse118I	RCCGGY	1 cut(s)	906
Bse1I	ACTGG	3 cut(s)	233, 703, 1835
Bse3DI	GCAATG	2 cut(s)	1081, 1658
BseBI	CCWGG	4 cut(s)	70, 207, 1623, 2050
BseDI	CCNNGG	4 cut(s)	69, 206, 726, 1552
BseGI	GGATG	2 cut(s)	1257, 1447
BseLI	CCNNNNNNNGG	1 cut(s)	116
BseMI	GCAATG	2 cut(s)	1081, 1658
BseMII	CTCAG	6 cut(s)	494, 566, 695, 880, 1240, 2121
BseNI	ACTGG	3 cut(s)	233, 703, 1835
BseRI	GAGGAG	5 cut(s)	626, 1003, 1259, 1344, 1988
BseXI	GCAGC	5 cut(s)	718, 1058, 1831, 2006, 2044
BsgI	GTGCAG	1 cut(s)	1325
Bsh1236I	CGCG	1 cut(s)	1419
BshFI	GGCC	4 cut(s)	603, 725, 1730, 1958
BshNI	GGYRCC	2 cut(s)	786, 1499
BsiHKAI	GWGCWC	2 cut(s)	1493, 1571
BsiHKCI	CYCGRG	1 cut(s)	1326
BsiSI	CCGG	3 cut(s)	726, 907, 950
BslI	CCNNNNNNNGG	1 cut(s)	116
BsmAI	GTCTC	8 cut(s)	707, 1015, 1201, 1230, 1249, 1374, 1612, 2011
BsmI	GAATGC	1 cut(s)	994
BsnI	GGCC	4 cut(s)	603, 725, 1730, 1958
Bso31I	GGTCTC	1 cut(s)	1612
BsoBI	CYCGRG	1 cut(s)	1326
Bsp1286I	GDGCHC	2 cut(s)	1493, 1571
Bsp1407I	TGTACA	1 cut(s)	301
BspACI	CCGC	3 cut(s)	278, 380, 1231
BspANI	GGCC	4 cut(s)	603, 725, 1730, 1958
BspCNI	CTCAG	6 cut(s)	495, 565, 694, 879, 1239, 2120
BspFNI	CGCG	1 cut(s)	1419
BspLI	GGNNCC	3 cut(s)	477, 788, 1501
BspMAI	CTGCAG	1 cut(s)	583
BspMI	ACCTGC	1 cut(s)	586
BspPI	GGATC	4 cut(s)	197, 269, 470, 483
BspQI	GCTCTTC	1 cut(s)	2088
BspT107I	GGYRCC	2 cut(s)	786, 1499
BspTNI	GGTCTC	1 cut(s)	1612
BsrDI	GCAATG	2 cut(s)	1081, 1658
BsrFI	RCCGGY	1 cut(s)	906
BsrGI	TGTACA	1 cut(s)	301
BsrI	ACTGG	3 cut(s)	233, 703, 1835
BssAI	RCCGGY	1 cut(s)	906
BssECI	CCNNGG	4 cut(s)	69, 206, 726, 1552
BssNI	GRCGYC	2 cut(s)	904, 1870
Bst2UI	CCWGG	4 cut(s)	70, 207, 1623, 2050
Bst4CI	ACNGT	8 cut(s)	114, 317, 598, 807, 923, 1204, 1705, 1934
Bst6I	CTCTTC	3 cut(s)	1877, 2065, 2088
BstACI	GRCGYC	2 cut(s)	904, 1870
BstAUI	TGTACA	1 cut(s)	301
BstC8I	GCNNGC	7 cut(s)	908, 1096, 1320, 1469, 1650, 1849, 2013
BstEII	GGTNACC	2 cut(s)	1520, 2032
BstF5I	GGATG	2 cut(s)	1257, 1447
BstFNI	CGCG	1 cut(s)	1419
BstHHI	GCGC	1 cut(s)	1738
BstMAI	GTCTC	8 cut(s)	707, 1015, 1201, 1230, 1249, 1374, 1612, 2011
BstMWI	GCNNNNNNNGC	8 cut(s)	731, 1303, 1497, 1742, 1955, 2003, 2012, 2095
BstNI	CCWGG	4 cut(s)	70, 207, 1623, 2050
BstNSI	RCATGY	4 cut(s)	28, 366, 757, 1851
BstPI	GGTNACC	2 cut(s)	1520, 2032
BstSCI	CCNGG	6 cut(s)	68, 205, 725, 948, 1621, 2048
BstSFI	CTRYAG	2 cut(s)	579, 1365
BstUI	CGCG	1 cut(s)	1419
BstV1I	GCAGC	5 cut(s)	718, 1058, 1831, 2006, 2044
BstV2I	GAAGAC	1 cut(s)	140
BstX2I	RGATCY	5 cut(s)	475, 1276, 1369, 1405, 1750
BstXI	CCANNNNNNTGG	1 cut(s)	703
BstYI	RGATCY	5 cut(s)	475, 1276, 1369, 1405, 1750
BsuI	GTATCC	1 cut(s)	376
BsuRI	GGCC	4 cut(s)	603, 725, 1730, 1958
BtrI	CACGTC	1 cut(s)	769
BtsCI	GGATG	2 cut(s)	1257, 1447
BtsI	GCAGTG	2 cut(s)	539, 917
BtsIMutI	CAGTG	9 cut(s)	110, 539, 594, 696, 917, 992, 1200, 1828, 1939
BveI	ACCTGC	1 cut(s)	586
Cac8I	GCNNGC	7 cut(s)	908, 1096, 1320, 1469, 1650, 1849, 2013
CfoI	GCGC	1 cut(s)	1738
Cfr10I	RCCGGY	1 cut(s)	906
Cfr13I	GGNCC	1 cut(s)	723
CseI	GACGC	3 cut(s)	912, 1425, 1859
CsiI	ACCWGGT	1 cut(s)	1621
Csp6I	GTAC	9 cut(s)	20, 302, 372, 787, 924, 1033, 1309, 1421, 1978
CviAII	CATG	9 cut(s)	25, 29, 176, 363, 754, 783, 899, 1848, 1909
CviQI	GTAC	9 cut(s)	20, 302, 372, 787, 924, 1033, 1309, 1421, 1978
EaeI	YGGCCR	1 cut(s)	601
Eam1104I	CTCTTC	3 cut(s)	1877, 2065, 2088
EarI	CTCTTC	3 cut(s)	1877, 2065, 2088
EciI	GGCGGA	1 cut(s)	1246
Ecl136II	GAGCTC	1 cut(s)	1569
Eco147I	AGGCCT	1 cut(s)	1730
Eco24I	GRGCYC	1 cut(s)	1571
Eco31I	GGTCTC	1 cut(s)	1612
Eco53kI	GAGCTC	1 cut(s)	1569
Eco57I	CTGAAG	1 cut(s)	2112
Eco88I	CYCGRG	1 cut(s)	1326
Eco91I	GGTNACC	2 cut(s)	1520, 2032
EcoICRI	GAGCTC	1 cut(s)	1569
EcoO65I	GGTNACC	2 cut(s)	1520, 2032
EcoRII	CCWGG	4 cut(s)	68, 205, 1621, 2048
EcoT22I	ATGCAT	1 cut(s)	30
EcoT38I	GRGCYC	1 cut(s)	1571
FaeI	CATG	9 cut(s)	28, 32, 179, 366, 757, 786, 902, 1851, 1912
FalI	AAGNNNNNCTT	2 cut(s)	1632, 1664
FatI	CATG	9 cut(s)	24, 28, 175, 362, 753, 782, 898, 1847, 1908
FauNDI	CATATG	2 cut(s)	563, 1463
Fnu4HI	GCNGC	5 cut(s)	732, 1072, 1845, 1995, 2058
FokI	GGATG	2 cut(s)	1264, 1454
FriOI	GRGCYC	1 cut(s)	1571
Fsp4HI	GCNGC	5 cut(s)	732, 1072, 1845, 1995, 2058
FspBI	CTAG	8 cut(s)	141, 444, 492, 651, 762, 1562, 1983, 2119
GlaI	GCGC	1 cut(s)	1737
GluI	GCNGC	5 cut(s)	732, 1072, 1845, 1995, 2058
GsuI	CTGGAG	2 cut(s)	1046, 1852
HaeIII	GGCC	4 cut(s)	603, 725, 1730, 1958
HapII	CCGG	3 cut(s)	726, 907, 950
HgaI	GACGC	3 cut(s)	912, 1425, 1859
HhaI	GCGC	1 cut(s)	1738
Hin1I	GRCGYC	2 cut(s)	904, 1870
Hin1II	CATG	9 cut(s)	28, 32, 179, 366, 757, 786, 902, 1851, 1912
Hin6I	GCGC	1 cut(s)	1736
HinP1I	GCGC	1 cut(s)	1736
HincII	GTYRAC	1 cut(s)	1448
HindII	GTYRAC	1 cut(s)	1448
HinfI	GANTC	5 cut(s)	136, 1343, 1815, 1900, 1916
HpaII	CCGG	3 cut(s)	726, 907, 950
HphI	GGTGA	7 cut(s)	131, 426, 473, 1385, 1532, 1637, 2026
Hpy166II	GTNNAC	3 cut(s)	22, 464, 1448
Hpy188III	TCNNGA	7 cut(s)	200, 492, 1025, 1274, 1379, 1514, 1879
Hpy8I	GTNNAC	3 cut(s)	22, 464, 1448
Hpy99I	CGWCG	4 cut(s)	1021, 1380, 1419, 1782
HpyAV	CCTTC	4 cut(s)	302, 489, 1511, 1698
HpyCH4III	ACNGT	8 cut(s)	114, 317, 598, 807, 923, 1204, 1705, 1934
HpyCH4IV	ACGT	5 cut(s)	18, 386, 768, 1288, 1390
HpyF10VI	GCNNNNNNNGC	8 cut(s)	731, 1303, 1497, 1742, 1955, 2003, 2012, 2095
HpySE526I	ACGT	5 cut(s)	18, 386, 768, 1288, 1390
Hsp92I	GRCGYC	2 cut(s)	904, 1870
Hsp92II	CATG	9 cut(s)	28, 32, 179, 366, 757, 786, 902, 1851, 1912
HspAI	GCGC	1 cut(s)	1736
KpnI	GGTACC	1 cut(s)	790
KroI	GCCGGC	1 cut(s)	906
KroNI	GCCGGC	1 cut(s)	908
LguI	GCTCTTC	1 cut(s)	2088
LmnI	GCTCC	1 cut(s)	596
Lsp1109I	GCAGC	5 cut(s)	718, 1058, 1831, 2006, 2044
LweI	GCATC	2 cut(s)	1447, 1981
MabI	ACCWGGT	1 cut(s)	1621
MaeI	CTAG	8 cut(s)	141, 444, 492, 651, 762, 1562, 1983, 2119
MaeII	ACGT	5 cut(s)	18, 386, 768, 1288, 1390
MfeI	CAATTG	2 cut(s)	333, 798
MflI	RGATCY	5 cut(s)	475, 1276, 1369, 1405, 1750
MhlI	GDGCHC	2 cut(s)	1493, 1571
MlsI	TGGCCA	1 cut(s)	603
MluI	ACGCGT	1 cut(s)	1417
MluNI	TGGCCA	1 cut(s)	603
MlyI	GAGTC	2 cut(s)	130, 1925
MmeI	TCCRAC	1 cut(s)	1568
Mox20I	TGGCCA	1 cut(s)	603
Mph1103I	ATGCAT	1 cut(s)	30
MroNI	GCCGGC	1 cut(s)	906
MscI	TGGCCA	1 cut(s)	603
MseI	TTAA	4 cut(s)	101, 156, 585, 1166
MslI	CAYNNNNRTG	4 cut(s)	27, 309, 701, 1535
Msp20I	TGGCCA	1 cut(s)	603
MspA1I	CMGCKG	1 cut(s)	280
MspI	CCGG	3 cut(s)	726, 907, 950
MspR9I	CCNGG	6 cut(s)	70, 207, 727, 950, 1623, 2050
MunI	CAATTG	2 cut(s)	333, 798
Mva1269I	GAATGC	1 cut(s)	994
MvaI	CCWGG	4 cut(s)	70, 207, 1623, 2050
MvnI	CGCG	1 cut(s)	1419
MwoI	GCNNNNNNNGC	8 cut(s)	731, 1303, 1497, 1742, 1955, 2003, 2012, 2095
NaeI	GCCGGC	1 cut(s)	908
NciI	CCSGG	2 cut(s)	727, 950
NdeI	CATATG	2 cut(s)	563, 1463
NgoMIV	GCCGGC	1 cut(s)	906
NlaIII	CATG	9 cut(s)	28, 32, 179, 366, 757, 786, 902, 1851, 1912
NlaIV	GGNNCC	3 cut(s)	477, 788, 1501
NmuCI	GTSAC	8 cut(s)	80, 358, 764, 1391, 1520, 1528, 1934, 2032
NsiI	ATGCAT	1 cut(s)	30
NspI	RCATGY	4 cut(s)	28, 366, 757, 1851
OliI	CACNNNNGTG	1 cut(s)	701
PaeI	GCATGC	1 cut(s)	1851
PaeR7I	CTCGAG	1 cut(s)	1326
PceI	AGGCCT	1 cut(s)	1730
PciI	ACATGT	2 cut(s)	362, 753
PciSI	GCTCTTC	1 cut(s)	2088
PcsI	WCGNNNNNNNCGW	1 cut(s)	1294
PctI	GAATGC	1 cut(s)	994
PdiI	GCCGGC	1 cut(s)	908
PfeI	GAWTC	3 cut(s)	1343, 1815, 1900
PflFI	GACNNNGTC	1 cut(s)	1526
PflMI	CCANNNNNTGG	1 cut(s)	116
PkrI	GCNGC	5 cut(s)	733, 1073, 1846, 1996, 2059
PleI	GAGTC	2 cut(s)	130, 1924
PpsI	GAGTC	2 cut(s)	130, 1924
PscI	ACATGT	2 cut(s)	362, 753
PsiI	TTATAA	1 cut(s)	39
Psp124BI	GAGCTC	1 cut(s)	1571
Psp6I	CCWGG	4 cut(s)	68, 205, 1621, 2048
PspEI	GGTNACC	2 cut(s)	1520, 2032
PspGI	CCWGG	4 cut(s)	68, 205, 1621, 2048
PspN4I	GGNNCC	3 cut(s)	477, 788, 1501
PspPI	GGNCC	1 cut(s)	723
PspXI	VCTCGAGB	1 cut(s)	1326
PsrI	GAACNNNNNNTAC	2 cut(s)	615, 647
PstI	CTGCAG	1 cut(s)	583
PsuI	RGATCY	5 cut(s)	475, 1276, 1369, 1405, 1750
PsyI	GACNNNGTC	1 cut(s)	1526
RsaI	GTAC	9 cut(s)	21, 303, 373, 788, 925, 1034, 1310, 1422, 1979
RsaNI	GTAC	9 cut(s)	20, 302, 372, 787, 924, 1033, 1309, 1421, 1978
RseI	CAYNNNNRTG	4 cut(s)	27, 309, 701, 1535
SacI	GAGCTC	1 cut(s)	1571
SapI	GCTCTTC	1 cut(s)	2088
SaqAI	TTAA	4 cut(s)	101, 156, 585, 1166
SatI	GCNGC	5 cut(s)	732, 1072, 1845, 1995, 2058
Sau96I	GGNCC	1 cut(s)	723
ScaI	AGTACT	3 cut(s)	925, 1034, 1979
SchI	GAGTC	2 cut(s)	130, 1925
ScrFI	CCNGG	6 cut(s)	70, 207, 727, 950, 1623, 2050
SduI	GDGCHC	2 cut(s)	1493, 1571
SexAI	ACCWGGT	1 cut(s)	1621
SfaNI	GCATC	2 cut(s)	1447, 1981
SfcI	CTRYAG	2 cut(s)	579, 1365
Sfr274I	CTCGAG	1 cut(s)	1326
SlaI	CTCGAG	1 cut(s)	1326
SmiMI	CAYNNNNRTG	4 cut(s)	27, 309, 701, 1535
SmlI	CTYRAG	6 cut(s)	1066, 1211, 1272, 1326, 1494, 1754
SmoI	CTYRAG	6 cut(s)	1066, 1211, 1272, 1326, 1494, 1754
SphI	GCATGC	1 cut(s)	1851
SseBI	AGGCCT	1 cut(s)	1730
SsiI	CCGC	3 cut(s)	278, 380, 1231
SspMI	CTAG	8 cut(s)	141, 444, 492, 651, 762, 1562, 1983, 2119
SstI	GAGCTC	1 cut(s)	1571
StuI	AGGCCT	1 cut(s)	1730
StyD4I	CCNGG	6 cut(s)	68, 205, 725, 948, 1621, 2048
TaaI	ACNGT	8 cut(s)	114, 317, 598, 807, 923, 1204, 1705, 1934
TaiI	ACGT	5 cut(s)	21, 389, 771, 1291, 1393
TaqI	TCGA	6 cut(s)	416, 1327, 1378, 1414, 1513, 1777
TatI	WGTACW	5 cut(s)	301, 923, 1032, 1308, 1977
TfiI	GAWTC	3 cut(s)	1343, 1815, 1900
Tru1I	TTAA	4 cut(s)	101, 156, 585, 1166
Tru9I	TTAA	4 cut(s)	101, 156, 585, 1166
TscAI	CASTG	9 cut(s)	117, 546, 601, 703, 917, 999, 1207, 1835, 1939
TseFI	GTSAC	8 cut(s)	80, 358, 764, 1391, 1520, 1528, 1934, 2032
TseI	GCWGC	5 cut(s)	731, 1071, 1844, 1994, 2057
Tsp45I	GTSAC	8 cut(s)	80, 358, 764, 1391, 1520, 1528, 1934, 2032
TspRI	CASTG	9 cut(s)	117, 546, 601, 703, 917, 999, 1207, 1835, 1939
Tth111I	GACNNNGTC	1 cut(s)	1526
Van91I	CCANNNNNTGG	1 cut(s)	116
XapI	RAATTY	2 cut(s)	1084, 2023
XbaI	TCTAGA	1 cut(s)	491
XceI	RCATGY	4 cut(s)	28, 366, 757, 1851
XhoI	CTCGAG	1 cut(s)	1326
XspI	CTAG	8 cut(s)	141, 444, 492, 651, 762, 1562, 1983, 2119
ZrmI	AGTACT	3 cut(s)	925, 1034, 1979
Zsp2I	ATGCAT	1 cut(s)	30

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.