DNA ligase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G17360 |
| rosa_chinensis | RchiOBHm_Chr3g0493941 |
| rosa_laevigata | RLG00000022689 |
| rosa_multiflora | Rmu_co8383177.1_g000001 Rmu_sc0000568.1_g000023 Rmu_sc0010399.1_g000002 |
| rosa_samantha | Rh3AG313100 Rh3BG348300 Rh3BG349300 Rh3CG346100 Rh3DG348600 |
| rosa_wichuraiana | Rw3G027410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 3 cut(s) | 446, 879, 1600 |
| Acc65I | GGTACC | 1 cut(s) | 818 |
| AccB1I | GGYRCC | 1 cut(s) | 818 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2828 |
| AccIII | TCCGGA | 1 cut(s) | 1488 |
| AciI | CCGC | 1 cut(s) | 2227 |
| AclI | AACGTT | 1 cut(s) | 2141 |
| AclWI | GGATC | 3 cut(s) | 111, 700, 1356 |
| AcoI | YGGCCR | 3 cut(s) | 3, 1897, 2688 |
| AcsI | RAATTY | 7 cut(s) | 347, 368, 610, 1079, 1618, 1911, 2600 |
| AcuI | CTGAAG | 6 cut(s) | 111, 761, 1236, 1658, 1871, 2616 |
| AcvI | CACGTG | 2 cut(s) | 2111, 2828 |
| AdeI | CACNNNGTG | 1 cut(s) | 431 |
| AfaI | GTAC | 8 cut(s) | 179, 820, 1023, 1382, 1542, 1713, 2449, 2558 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1371, 2828 |
| AhlI | ACTAGT | 1 cut(s) | 1921 |
| AjnI | CCWGG | 3 cut(s) | 544, 1792, 2796 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1293, 1325 |
| Alw21I | GWGCWC | 4 cut(s) | 317, 1268, 1909, 2751 |
| Alw26I | GTCTC | 5 cut(s) | 35, 410, 1236, 2469, 2790 |
| Alw44I | GTGCAC | 2 cut(s) | 1264, 1905 |
| AlwI | GGATC | 3 cut(s) | 111, 700, 1356 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 461, 1691, 2903 |
| Aor13HI | TCCGGA | 1 cut(s) | 1488 |
| AoxI | GGCC | 4 cut(s) | 3, 620, 1897, 2688 |
| ApaLI | GTGCAC | 2 cut(s) | 1264, 1905 |
| ApeKI | GCWGC | 7 cut(s) | 1049, 1246, 1280, 1331, 1688, 2801, 2964 |
| ApoI | RAATTY | 7 cut(s) | 347, 368, 610, 1079, 1618, 1911, 2600 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1420, 1452, 2174, 2206, 2599, 2631 |
| AseI | ATTAAT | 2 cut(s) | 477, 1992 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 246, 1622, 2601, 2919 |
| Asp718I | GGTACC | 1 cut(s) | 818 |
| AspLEI | GCGC | 1 cut(s) | 1680 |
| AspS9I | GGNCC | 2 cut(s) | 620, 1932 |
| AsuHPI | GGTGA | 6 cut(s) | 435, 498, 713, 733, 1415, 2786 |
| AsuII | TTCGAA | 1 cut(s) | 1552 |
| AvaII | GGWCC | 1 cut(s) | 1932 |
| BaeGI | GKGCMC | 2 cut(s) | 1268, 1909 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 141, 174 |
| BalI | TGGCCA | 3 cut(s) | 5, 1899, 2690 |
| BanI | GGYRCC | 1 cut(s) | 818 |
| BanII | GRGCYC | 2 cut(s) | 317, 2751 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 2261, 2293, 2884, 2916 |
| BbrPI | CACGTG | 2 cut(s) | 2111, 2828 |
| BbsI | GAAGAC | 2 cut(s) | 1890, 2170 |
| Bbv12I | GWGCWC | 4 cut(s) | 317, 1268, 1909, 2751 |
| BbvCI | CCTCAGC | 1 cut(s) | 2718 |
| BbvI | GCAGC | 6 cut(s) | 1036, 1233, 1267, 1343, 1700, 2788 |
| BccI | CCATC | 8 cut(s) | 85, 782, 1889, 1922, 2446, 2830, 2935, 2954 |
| BceAI | ACGGC | 2 cut(s) | 256, 386 |
| BciT130I | CCWGG | 3 cut(s) | 546, 1794, 2798 |
| BclI | TGATCA | 1 cut(s) | 376 |
| BcoDI | GTCTC | 5 cut(s) | 35, 410, 1236, 2469, 2790 |
| BcuI | ACTAGT | 1 cut(s) | 1921 |
| BfaI | CTAG | 4 cut(s) | 299, 1160, 1922, 2813 |
| BfmI | CTRYAG | 5 cut(s) | 45, 1089, 1281, 1650, 1692 |
| BfoI | RGCGCY | 1 cut(s) | 1681 |
| BfuAI | ACCTGC | 3 cut(s) | 446, 879, 1600 |
| BglII | AGATCT | 4 cut(s) | 301, 1396, 1984, 2682 |
| BisI | GCNGC | 7 cut(s) | 1050, 1247, 1281, 1332, 1689, 2802, 2965 |
| BlsI | GCNGC | 7 cut(s) | 1051, 1248, 1282, 1333, 1690, 2803, 2966 |
| Bme1390I | CCNGG | 3 cut(s) | 546, 1794, 2798 |
| Bme18I | GGWCC | 1 cut(s) | 1932 |
| BmgT120I | GGNCC | 2 cut(s) | 620, 1932 |
| BmiI | GGNNCC | 4 cut(s) | 820, 1791, 1933, 2724 |
| BmrFI | CCNGG | 3 cut(s) | 546, 1794, 2798 |
| BpiI | GAAGAC | 2 cut(s) | 1890, 2170 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 407, 439 |
| BpmI | CTGGAG | 3 cut(s) | 1126, 1358, 2772 |
| Bpu10I | CCTNAGC | 3 cut(s) | 316, 2718, 2745 |
| Bpu14I | TTCGAA | 1 cut(s) | 1552 |
| BpuEI | CTTGAG | 3 cut(s) | 43, 1398, 1587 |
| BsaAI | YACGTR | 3 cut(s) | 1562, 2111, 2828 |
| BsaI | GGTCTC | 1 cut(s) | 410 |
| BsaJI | CCNNGG | 2 cut(s) | 544, 2292 |
| BsaWI | WCCGGW | 1 cut(s) | 1488 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2770, 2800 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1371, 2828 |
| Bse1I | ACTGG | 4 cut(s) | 1341, 2043, 2331, 2789 |
| Bse3DI | GCAATG | 3 cut(s) | 799, 1117, 1578 |
| BseAI | TCCGGA | 1 cut(s) | 1488 |
| BseBI | CCWGG | 3 cut(s) | 546, 1794, 2798 |
| BseDI | CCNNGG | 2 cut(s) | 544, 2292 |
| BseGI | GGATG | 7 cut(s) | 763, 1171, 1966, 2047, 2323, 2818, 2950 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1371, 2828 |
| BseMI | GCAATG | 3 cut(s) | 799, 1117, 1578 |
| BseMII | CTCAG | 6 cut(s) | 82, 330, 405, 2709, 2736, 2942 |
| BseNI | ACTGG | 4 cut(s) | 1341, 2043, 2331, 2789 |
| BseRI | GAGGAG | 4 cut(s) | 174, 1440, 1759, 2735 |
| BseSI | GKGCMC | 2 cut(s) | 1268, 1909 |
| BseXI | GCAGC | 6 cut(s) | 1036, 1233, 1267, 1343, 1700, 2788 |
| BsgI | GTGCAG | 3 cut(s) | 702, 1467, 2790 |
| Bsh1285I | CGRYCG | 1 cut(s) | 358 |
| BshFI | GGCC | 4 cut(s) | 5, 622, 1899, 2690 |
| BshNI | GGYRCC | 1 cut(s) | 818 |
| BsiEI | CGRYCG | 1 cut(s) | 358 |
| BsiHKAI | GWGCWC | 4 cut(s) | 317, 1268, 1909, 2751 |
| BsiSI | CCGG | 1 cut(s) | 1489 |
| BslFI | GGGAC | 4 cut(s) | 338, 1366, 2498, 2690 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1371, 2828 |
| BsmAI | GTCTC | 5 cut(s) | 35, 410, 1236, 2469, 2790 |
| BsmFI | GGGAC | 4 cut(s) | 338, 1366, 2498, 2690 |
| BsmI | GAATGC | 1 cut(s) | 2077 |
| BsnI | GGCC | 4 cut(s) | 5, 622, 1899, 2690 |
| Bso31I | GGTCTC | 1 cut(s) | 410 |
| Bsp119I | TTCGAA | 1 cut(s) | 1552 |
| Bsp1286I | GDGCHC | 4 cut(s) | 317, 1268, 1909, 2751 |
| Bsp13I | TCCGGA | 1 cut(s) | 1488 |
| Bsp1407I | TGTACA | 2 cut(s) | 1021, 1380 |
| BspACI | CCGC | 1 cut(s) | 2227 |
| BspANI | GGCC | 4 cut(s) | 5, 622, 1899, 2690 |
| BspCNI | CTCAG | 6 cut(s) | 81, 329, 406, 2710, 2737, 2941 |
| BspEI | TCCGGA | 1 cut(s) | 1488 |
| BspHI | TCATGA | 2 cut(s) | 373, 1746 |
| BspLI | GGNNCC | 4 cut(s) | 820, 1791, 1933, 2724 |
| BspMAI | CTGCAG | 1 cut(s) | 1285 |
| BspMI | ACCTGC | 3 cut(s) | 446, 879, 1600 |
| BspPI | GGATC | 3 cut(s) | 111, 700, 1356 |
| BspT104I | TTCGAA | 1 cut(s) | 1552 |
| BspT107I | GGYRCC | 1 cut(s) | 818 |
| BspTNI | GGTCTC | 1 cut(s) | 410 |
| BsrDI | GCAATG | 3 cut(s) | 799, 1117, 1578 |
| BsrGI | TGTACA | 2 cut(s) | 1021, 1380 |
| BsrI | ACTGG | 4 cut(s) | 1341, 2043, 2331, 2789 |
| BssECI | CCNNGG | 2 cut(s) | 544, 2292 |
| BssT1I | CCWWGG | 1 cut(s) | 2292 |
| Bst2UI | CCWGG | 3 cut(s) | 546, 1794, 2798 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2318 |
| BstAUI | TGTACA | 2 cut(s) | 1021, 1380 |
| BstBAI | YACGTR | 3 cut(s) | 1562, 2111, 2828 |
| BstBI | TTCGAA | 1 cut(s) | 1552 |
| BstDEI | CTNAG | 6 cut(s) | 68, 316, 414, 2718, 2745, 2928 |
| BstF5I | GGATG | 7 cut(s) | 763, 1171, 1966, 2047, 2323, 2818, 2950 |
| BstH2I | RGCGCY | 1 cut(s) | 1681 |
| BstHHI | GCGC | 1 cut(s) | 1680 |
| BstMAI | GTCTC | 5 cut(s) | 35, 410, 1236, 2469, 2790 |
| BstMCI | CGRYCG | 1 cut(s) | 358 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 2233, 2318 |
| BstNI | CCWGG | 3 cut(s) | 546, 1794, 2798 |
| BstNSI | RCATGY | 5 cut(s) | 1104, 1124, 1350, 1422, 2580 |
| BstSCI | CCNGG | 3 cut(s) | 544, 1792, 2796 |
| BstSFI | CTRYAG | 5 cut(s) | 45, 1089, 1281, 1650, 1692 |
| BstSLI | GKGCMC | 2 cut(s) | 1268, 1909 |
| BstSNI | TACGTA | 1 cut(s) | 1562 |
| BstV1I | GCAGC | 6 cut(s) | 1036, 1233, 1267, 1343, 1700, 2788 |
| BstV2I | GAAGAC | 2 cut(s) | 1890, 2170 |
| BstX2I | RGATCY | 5 cut(s) | 301, 1361, 1396, 1984, 2682 |
| BstYI | RGATCY | 5 cut(s) | 301, 1361, 1396, 1984, 2682 |
| BsuRI | GGCC | 4 cut(s) | 5, 622, 1899, 2690 |
| BtsCI | GGATG | 7 cut(s) | 763, 1171, 1966, 2047, 2323, 2818, 2950 |
| BtsI | GCAGTG | 1 cut(s) | 2031 |
| BtsIMutI | CAGTG | 7 cut(s) | 76, 1334, 1847, 2031, 2338, 2787, 2862 |
| BveI | ACCTGC | 3 cut(s) | 446, 879, 1600 |
| CaiI | CAGNNNCTG | 3 cut(s) | 461, 1691, 2903 |
| CciI | TCATGA | 2 cut(s) | 373, 1746 |
| CfoI | GCGC | 1 cut(s) | 1680 |
| Cfr13I | GGNCC | 2 cut(s) | 620, 1932 |
| CseI | GACGC | 3 cut(s) | 1352, 2158, 2599 |
| Csp6I | GTAC | 8 cut(s) | 178, 819, 1022, 1381, 1541, 1712, 2448, 2557 |
| CviQI | GTAC | 8 cut(s) | 178, 819, 1022, 1381, 1541, 1712, 2448, 2557 |
| DdeI | CTNAG | 6 cut(s) | 68, 316, 414, 2718, 2745, 2928 |
| DraIII | CACNNNGTG | 1 cut(s) | 431 |
| EaeI | YGGCCR | 3 cut(s) | 3, 1897, 2688 |
| Ecl136II | GAGCTC | 2 cut(s) | 315, 2749 |
| Eco105I | TACGTA | 1 cut(s) | 1562 |
| Eco130I | CCWWGG | 1 cut(s) | 2292 |
| Eco24I | GRGCYC | 2 cut(s) | 317, 2751 |
| Eco31I | GGTCTC | 1 cut(s) | 410 |
| Eco47I | GGWCC | 1 cut(s) | 1932 |
| Eco53kI | GAGCTC | 2 cut(s) | 315, 2749 |
| Eco57I | CTGAAG | 6 cut(s) | 111, 761, 1236, 1658, 1871, 2616 |
| Eco72I | CACGTG | 2 cut(s) | 2111, 2828 |
| EcoICRI | GAGCTC | 2 cut(s) | 315, 2749 |
| EcoRI | GAATTC | 2 cut(s) | 610, 1618 |
| EcoRII | CCWGG | 3 cut(s) | 544, 1792, 2796 |
| EcoT14I | CCWWGG | 1 cut(s) | 2292 |
| EcoT22I | ATGCAT | 3 cut(s) | 1102, 2134, 2377 |
| EcoT38I | GRGCYC | 2 cut(s) | 317, 2751 |
| ErhI | CCWWGG | 1 cut(s) | 2292 |
| FaqI | GGGAC | 4 cut(s) | 338, 1366, 2498, 2690 |
| FbaI | TGATCA | 1 cut(s) | 376 |
| Fnu4HI | GCNGC | 7 cut(s) | 1050, 1247, 1281, 1332, 1689, 2802, 2965 |
| FokI | GGATG | 7 cut(s) | 770, 1178, 1973, 2054, 2330, 2805, 2957 |
| FriOI | GRGCYC | 2 cut(s) | 317, 2751 |
| Fsp4HI | GCNGC | 7 cut(s) | 1050, 1247, 1281, 1332, 1689, 2802, 2965 |
| FspBI | CTAG | 4 cut(s) | 299, 1160, 1922, 2813 |
| GlaI | GCGC | 1 cut(s) | 1679 |
| GluI | GCNGC | 7 cut(s) | 1050, 1247, 1281, 1332, 1689, 2802, 2965 |
| GsuI | CTGGAG | 3 cut(s) | 1126, 1358, 2772 |
| HaeII | RGCGCY | 1 cut(s) | 1681 |
| HaeIII | GGCC | 4 cut(s) | 5, 622, 1899, 2690 |
| HapII | CCGG | 1 cut(s) | 1489 |
| HgaI | GACGC | 3 cut(s) | 1352, 2158, 2599 |
| HhaI | GCGC | 1 cut(s) | 1680 |
| Hin6I | GCGC | 1 cut(s) | 1678 |
| HinP1I | GCGC | 1 cut(s) | 1678 |
| HincII | GTYRAC | 4 cut(s) | 222, 580, 1968, 2161 |
| HindII | GTYRAC | 4 cut(s) | 222, 580, 1968, 2161 |
| HindIII | AAGCTT | 3 cut(s) | 1670, 1869, 2215 |
| HinfI | GANTC | 6 cut(s) | 200, 797, 1764, 1824, 1964, 2844 |
| HpaI | GTTAAC | 2 cut(s) | 222, 580 |
| HpaII | CCGG | 1 cut(s) | 1489 |
| HphI | GGTGA | 6 cut(s) | 435, 498, 713, 733, 1415, 2786 |
| Hpy166II | GTNNAC | 9 cut(s) | 222, 580, 704, 1266, 1907, 1968, 2015, 2161, 2794 |
| Hpy8I | GTNNAC | 9 cut(s) | 222, 580, 704, 1266, 1907, 1968, 2015, 2161, 2794 |
| Hpy99I | CGWCG | 1 cut(s) | 1049 |
| HpyCH4IV | ACGT | 7 cut(s) | 669, 1044, 1561, 1941, 2110, 2141, 2827 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 2233, 2318 |
| HpyF3I | CTNAG | 6 cut(s) | 68, 316, 414, 2718, 2745, 2928 |
| HpySE526I | ACGT | 7 cut(s) | 669, 1044, 1561, 1941, 2110, 2141, 2827 |
| HspAI | GCGC | 1 cut(s) | 1678 |
| Kpn2I | TCCGGA | 1 cut(s) | 1488 |
| KpnI | GGTACC | 1 cut(s) | 822 |
| Ksp22I | TGATCA | 1 cut(s) | 376 |
| KspAI | GTTAAC | 2 cut(s) | 222, 580 |
| LmnI | GCTCC | 8 cut(s) | 312, 910, 1107, 1129, 1568, 2121, 2522, 2722 |
| Lsp1109I | GCAGC | 6 cut(s) | 1036, 1233, 1267, 1343, 1700, 2788 |
| MaeI | CTAG | 4 cut(s) | 299, 1160, 1922, 2813 |
| MaeII | ACGT | 7 cut(s) | 669, 1044, 1561, 1941, 2110, 2141, 2827 |
| MfeI | CAATTG | 1 cut(s) | 2517 |
| MflI | RGATCY | 5 cut(s) | 301, 1361, 1396, 1984, 2682 |
| MhlI | GDGCHC | 4 cut(s) | 317, 1268, 1909, 2751 |
| MlsI | TGGCCA | 3 cut(s) | 5, 1899, 2690 |
| MluNI | TGGCCA | 3 cut(s) | 5, 1899, 2690 |
| MlyI | GAGTC | 1 cut(s) | 1973 |
| MmeI | TCCRAC | 3 cut(s) | 966, 2035, 2124 |
| Mox20I | TGGCCA | 3 cut(s) | 5, 1899, 2690 |
| Mph1103I | ATGCAT | 3 cut(s) | 1102, 2134, 2377 |
| MroI | TCCGGA | 1 cut(s) | 1488 |
| MroXI | GAANNNNTTC | 4 cut(s) | 246, 1622, 2601, 2919 |
| MscI | TGGCCA | 3 cut(s) | 5, 1899, 2690 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1293 |
| Msp20I | TGGCCA | 3 cut(s) | 5, 1899, 2690 |
| MspA1I | CMGCKG | 3 cut(s) | 1691, 2717, 2967 |
| MspI | CCGG | 1 cut(s) | 1489 |
| MspR9I | CCNGG | 3 cut(s) | 546, 1794, 2798 |
| MunI | CAATTG | 1 cut(s) | 2517 |
| Mva1269I | GAATGC | 1 cut(s) | 2077 |
| MvaI | CCWGG | 3 cut(s) | 546, 1794, 2798 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 2233, 2318 |
| NlaIV | GGNNCC | 4 cut(s) | 820, 1791, 1933, 2724 |
| NmuCI | GTSAC | 8 cut(s) | 280, 340, 431, 739, 1062, 1324, 2026, 2866 |
| NsiI | ATGCAT | 3 cut(s) | 1102, 2134, 2377 |
| NspI | RCATGY | 5 cut(s) | 1104, 1124, 1350, 1422, 2580 |
| NspV | TTCGAA | 1 cut(s) | 1552 |
| PaeI | GCATGC | 1 cut(s) | 1104 |
| PagI | TCATGA | 2 cut(s) | 373, 1746 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1558 |
| PctI | GAATGC | 1 cut(s) | 2077 |
| PdmI | GAANNNNTTC | 4 cut(s) | 246, 1622, 2601, 2919 |
| PfeI | GAWTC | 5 cut(s) | 200, 797, 1764, 1824, 2844 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2828 |
| PfoI | TCCNGGA | 1 cut(s) | 1792 |
| PkrI | GCNGC | 7 cut(s) | 1051, 1248, 1282, 1333, 1690, 2803, 2966 |
| Ple19I | CGATCG | 1 cut(s) | 358 |
| PleI | GAGTC | 1 cut(s) | 1972 |
| PmaCI | CACGTG | 2 cut(s) | 2111, 2828 |
| PmlI | CACGTG | 2 cut(s) | 2111, 2828 |
| PpsI | GAGTC | 1 cut(s) | 1972 |
| Ppu21I | YACGTR | 3 cut(s) | 1562, 2111, 2828 |
| PshBI | ATTAAT | 2 cut(s) | 477, 1992 |
| Psp124BI | GAGCTC | 2 cut(s) | 317, 2751 |
| Psp1406I | AACGTT | 1 cut(s) | 2141 |
| Psp6I | CCWGG | 3 cut(s) | 544, 1792, 2796 |
| PspCI | CACGTG | 2 cut(s) | 2111, 2828 |
| PspGI | CCWGG | 3 cut(s) | 544, 1792, 2796 |
| PspN4I | GGNNCC | 4 cut(s) | 820, 1791, 1933, 2724 |
| PspPI | GGNCC | 2 cut(s) | 620, 1932 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1533, 1565 |
| PstI | CTGCAG | 1 cut(s) | 1285 |
| PstNI | CAGNNNCTG | 3 cut(s) | 461, 1691, 2903 |
| PsuI | RGATCY | 5 cut(s) | 301, 1361, 1396, 1984, 2682 |
| PvuI | CGATCG | 1 cut(s) | 358 |
| PvuII | CAGCTG | 3 cut(s) | 1691, 2717, 2967 |
| RsaI | GTAC | 8 cut(s) | 179, 820, 1023, 1382, 1542, 1713, 2449, 2558 |
| RsaNI | GTAC | 8 cut(s) | 178, 819, 1022, 1381, 1541, 1712, 2448, 2557 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1293 |
| SacI | GAGCTC | 2 cut(s) | 317, 2751 |
| SatI | GCNGC | 7 cut(s) | 1050, 1247, 1281, 1332, 1689, 2802, 2965 |
| Sau96I | GGNCC | 2 cut(s) | 620, 1932 |
| SchI | GAGTC | 1 cut(s) | 1973 |
| ScrFI | CCNGG | 3 cut(s) | 546, 1794, 2798 |
| SduI | GDGCHC | 4 cut(s) | 317, 1268, 1909, 2751 |
| SfcI | CTRYAG | 5 cut(s) | 45, 1089, 1281, 1650, 1692 |
| SfuI | TTCGAA | 1 cut(s) | 1552 |
| SinI | GGWCC | 1 cut(s) | 1932 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1293 |
| SmlI | CTYRAG | 3 cut(s) | 22, 1413, 1602 |
| SmoI | CTYRAG | 3 cut(s) | 22, 1413, 1602 |
| SnaBI | TACGTA | 1 cut(s) | 1562 |
| SpeI | ACTAGT | 1 cut(s) | 1921 |
| SphI | GCATGC | 1 cut(s) | 1104 |
| SsiI | CCGC | 1 cut(s) | 2227 |
| SspI | AATATT | 3 cut(s) | 216, 475, 523 |
| SspMI | CTAG | 4 cut(s) | 299, 1160, 1922, 2813 |
| SstI | GAGCTC | 2 cut(s) | 317, 2751 |
| StyD4I | CCNGG | 3 cut(s) | 544, 1792, 2796 |
| StyI | CCWWGG | 1 cut(s) | 2292 |
| TaiI | ACGT | 7 cut(s) | 672, 1047, 1564, 1944, 2113, 2144, 2830 |
| TaqI | TCGA | 5 cut(s) | 632, 1552, 1973, 2181, 2842 |
| TatI | WGTACW | 5 cut(s) | 177, 1021, 1380, 1540, 1711 |
| TfiI | GAWTC | 5 cut(s) | 200, 797, 1764, 1824, 2844 |
| TscAI | CASTG | 7 cut(s) | 76, 1341, 1854, 2031, 2338, 2787, 2869 |
| TseFI | GTSAC | 8 cut(s) | 280, 340, 431, 739, 1062, 1324, 2026, 2866 |
| TseI | GCWGC | 7 cut(s) | 1049, 1246, 1280, 1331, 1688, 2801, 2964 |
| Tsp45I | GTSAC | 8 cut(s) | 280, 340, 431, 739, 1062, 1324, 2026, 2866 |
| TspRI | CASTG | 7 cut(s) | 76, 1341, 1854, 2031, 2338, 2787, 2869 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2828 |
| VneI | GTGCAC | 2 cut(s) | 1264, 1905 |
| VpaK11BI | GGWCC | 1 cut(s) | 1932 |
| VspI | ATTAAT | 2 cut(s) | 477, 1992 |
| XapI | RAATTY | 7 cut(s) | 347, 368, 610, 1079, 1618, 1911, 2600 |
| XceI | RCATGY | 5 cut(s) | 1104, 1124, 1350, 1422, 2580 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 1726, 2523 |
| XmnI | GAANNNNTTC | 4 cut(s) | 246, 1622, 2601, 2919 |
| XspI | CTAG | 4 cut(s) | 299, 1160, 1922, 2813 |
| Zsp2I | ATGCAT | 3 cut(s) | 1102, 2134, 2377 |