Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000574.1

Orthogroup ID

OG0008337

Physical Location & Seq

Genomic Coordinates Reverse (-)

243852 .. 251356

Gene Structure 7505 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2130 bp

atggcagtcgcagagctctcaaccccttcattcaccaacacccgccttgttcacccatctaagctctctttctcaaccacccatctccactctcaccgccgtcttgcttttccacctctctctcgcacccataatgctagaatctcttgctctcttgcacccaatcaagttcaagctcctgctcctgcgcaaactgaagagcccaagaacaaggccgagtgttatggcgtgttttgcctcacctatgatctcaaagctgaagaagagacaaaatcctggaagaaattaattaatgttgcggtctcaggtgcagctggaatgatttctaatcatctactgttcaaacttgcgtcgggtgaggtttttggggcagaccaacctgttgcgttgaaactactgggatctgaaagatcatttgaagctctcgaaggagttgctatggaattggaggattccctatttcctctgttgagggaggtgatcataagtattgatccatatgaggtgttccaagatgttgactgggctctactaataggagcaaagcctagaggtcctggaatggaacgagctgatttgttggatataaatgggcagatctttgcagcgcagggaaaggctcttaatgctgttgcatctcgtaatgtcaaggtgattgtggttggcaatccttgtaacacaaatgcactaatttgtttgaaaaatgctccgaacattcctgctaaaaattttcatgctttgacacggctggatgaaaatagagcaaaatgtcagctggccctcaaagctggtgtcttctatgataaagtcccagatttcttaaatgctagaattgatggcttgcctgtcaaagaggtcatcaaggatcacaagtggttagaggaggagtttacacacaaggtccagacgagaggaggtgctctcataaaaaagtggggaagatcttcagctgcatcaacttctgtgtcgattgtagatgccataaagtccttggttaatcctacccctgagggcgactggttttcttctggtgtttacaccaacggaaatccctatggtatagcagaggatatagtattcagtatgccatgcagatccaaaggggatggagattatgaacttgtgaaggacataaaatttgacgattatcttctcaagagaataacaaagagtgaagctgagttactagctgagaaaagatgtgttggtcacttaattgggcagggtattgctttttgtgatttgcccgaggacactatgcttcctggagagatccagtgccaccaagtcaccaaccccaccaggttgagaggaaaagagacggagcgagttgcacttctagccatcaaggctcaaatagagcatgaacttagctcggtgctgatttcctggaatgaatccagtcacttttgtcagtggaaaggagttggttgcagtcgccggcatcaaagggtcatagtgttagacctacagtcccagcaattggcaagatccatatccccctacgtaggtaatctaagcttcctcaagaagctatatttacaaaacaatagcttcactggtgatatcccaccacatattggtcacctgaggaggctgcagattttaagactggggaataattccttcagtggcaaaatccctgccaatatatccagttgctctaacctcataaaactagatttcgggttcaacaggctggttcggaaaattcctagcacaattgggtcgttgttcaagctccagatgcttagttttgacgataacagcctaacaggaacgatcccaccttcgtttggcaacctttcatccctaaccaagcttttggcaattggtaatttcctggggggaagtattcctagttctgtagggaaacttacaagcgtaaaactctttgctgtgggagataatttgttgtctggtgctgttcctgctttcattttcaacatgtcatctctcattatgtttgacttgatggggaaccaattccatggtaggcttctctcagacatgggcaacacccttcctaatctccaatttagagatgttggcctgaacaaattcataaccggacccattcccatgtccatatccaatgcctccaatcttacacaatttattgttgcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006091 GO:0006099 GO:0006101 GO:0006107 GO:0006108 GO:0006139 GO:0006725 GO:0006732 GO:0006733 GO:0006734 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008746 GO:0009060 GO:0009117 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009579 GO:0009941 GO:0009987 GO:0015980 GO:0016491 GO:0016614 GO:0016615 GO:0016616 GO:0016651 GO:0016652 GO:0016999 GO:0017144 GO:0019362 GO:0019637 GO:0019674 GO:0019752 GO:0030060 GO:0031967 GO:0031975 GO:0034641 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043648 GO:0044237 GO:0044238 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045333 GO:0046483 GO:0046496 GO:0048046 GO:0050896 GO:0051186 GO:0051775 GO:0055086 GO:0055114 GO:0071704 GO:0072350 GO:0072524 GO:1901360 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko00620 ko00710 ko01100 ko01120 ko01200 map00620 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

Ldh_1_C Ldh_1_N

Protein Analysis

709

Amino Acids

77.71

Weight (kDa)

8.79

Isoelectric Point (pI)

33.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ldh_1_N	PF00056	98 - 245	1.2e-35	lactate/malate dehydrogenase, NAD binding domain
Ldh_1_C	PF02866	248 - 402	6.5e-32	lactate/malate dehydrogenase, alpha/beta C-terminal domain
LRRNT_2	PF08263	441 - 479	7.6e-09	Leucine rich repeat N-terminal domain
LRR_14	PF23598	484 - 586	1.4e-09	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008337)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58330 AT5G58330 AT5G58330
fragaria_vesca	FvH4_7g06530
malus_domestica	MD02G1243100.v1.1 MD07G1073300.v1.1
prunus_persica	Prupe.2G091600_v2.0.a1
pyrus_communis	pycom02g20970 pycom07g05680
rosa_chinensis	RchiOBHm_Chr1g0334961
rosa_laevigata	RLG00000029409
rosa_multiflora	Rmu_co7973608.1_g000002 Rmu_sc0000574.1_g000062 Rmu_sc0000574.1_g000065
rosa_roxburghii	Rroxscaffold_4G00316350
rosa_rugosa	Rorug01G0118000 Rorug01G0118100
rosa_samantha	Rh1AG141400 Rh1BG108900 Rh1CG133300 Rh1DG145900 Rh1DG146000
rosa_wichuraiana	Rw1G011730

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	189
AccB7I	CCANNNNNTGG	2 cut(s)	1483, 1580
AciI	CCGC	3 cut(s)	43, 97, 299
AclWI	GGATC	7 cut(s)	409, 488, 873, 1089, 1267, 1485, 1777
AcsI	RAATTY	4 cut(s)	727, 1136, 1710, 2060
AcuI	CTGAAG	4 cut(s)	216, 279, 930, 1612
AfiI	CCNNNNNNNGG	4 cut(s)	1483, 1508, 1580, 1796
AflIII	ACRYGT	1 cut(s)	1947
AgsI	TTSAA	8 cut(s)	173, 343, 391, 419, 700, 1693, 1738, 1945
AhdI	GACNNNNNGTC	1 cut(s)	1471
AjnI	CCWGG	6 cut(s)	275, 556, 1264, 1301, 1388, 1842
Alw21I	GWGCWC	2 cut(s)	18, 922
Alw26I	GTCTC	3 cut(s)	260, 307, 1313
AlwI	GGATC	7 cut(s)	409, 488, 873, 1089, 1267, 1485, 1777
Ama87I	CYCGRG	1 cut(s)	1247
AoxI	GGCC	3 cut(s)	213, 777, 2050
ApeKI	GCWGC	4 cut(s)	311, 605, 950, 1597
ApoI	RAATTY	4 cut(s)	727, 1136, 1710, 2060
ArsI	GACNNNNNNTTYG	4 cut(s)	777, 809, 1121, 1153
AseI	ATTAAT	2 cut(s)	287, 291
Asp700I	GAANNNNTTC	4 cut(s)	322, 943, 1985, 2060
AspLEI	GCGC	2 cut(s)	190, 610
AspS9I	GGNCC	4 cut(s)	554, 778, 901, 2072
AvaI	CYCGRG	1 cut(s)	1247
AvaII	GGWCC	3 cut(s)	554, 901, 2072
AxyI	CCTNAGG	2 cut(s)	1008, 1589
BanII	GRGCYC	3 cut(s)	18, 204, 529
BarI	GAAGNNNNNNTAC	2 cut(s)	1167, 1199
BbsI	GAAGAC	1 cut(s)	787
Bbv12I	GWGCWC	2 cut(s)	18, 922
BbvI	GCAGC	4 cut(s)	323, 617, 937, 1584
BccI	CCATC	6 cut(s)	64, 90, 830, 1100, 1352, 1969
BceAI	ACGGC	2 cut(s)	84, 761
BcgI	CGANNNNNNTGC	2 cut(s)	416, 450
BciT130I	CCWGG	6 cut(s)	277, 558, 1266, 1303, 1390, 1844
BclI	TGATCA	1 cut(s)	480
BcoDI	GTCTC	3 cut(s)	260, 307, 1313
BfaI	CTAG	8 cut(s)	138, 549, 828, 1187, 1340, 1679, 1716, 1860
BfmI	CTRYAG	3 cut(s)	1469, 1598, 1866
BglI	GCCNNNNNGGC	1 cut(s)	1349
BglII	AGATCT	2 cut(s)	597, 941
BisI	GCNGC	4 cut(s)	312, 606, 951, 1598
BlsI	GCNGC	4 cut(s)	313, 607, 952, 1599
Bme1390I	CCNGG	6 cut(s)	277, 558, 1266, 1303, 1390, 1844
Bme18I	GGWCC	3 cut(s)	554, 901, 2072
BmeRI	GACNNNNNGTC	1 cut(s)	1471
BmeT110I	CYCGRG	1 cut(s)	1247
BmgT120I	GGNCC	4 cut(s)	554, 778, 901, 2072
BmiI	GGNNCC	2 cut(s)	1982, 2074
BmrFI	CCNGG	6 cut(s)	277, 558, 1266, 1303, 1390, 1844
BmrI	ACTGGG	3 cut(s)	407, 532, 1622
BmsI	GCATC	5 cut(s)	644, 962, 967, 1453, 1737
BmuI	ACTGGG	3 cut(s)	407, 532, 1622
BpiI	GAAGAC	1 cut(s)	787
BplI	GAGNNNNNCTC	2 cut(s)	906, 938
BpmI	CTGGAG	2 cut(s)	1287, 1727
BpuEI	CTTGAG	2 cut(s)	1139, 1511
BsaAI	YACGTR	1 cut(s)	1507
BsaBI	GATNNNNATC	1 cut(s)	1495
BsaI	GGTCTC	1 cut(s)	307
BsaJI	CCNNGG	4 cut(s)	990, 1248, 1843, 1990
BsaWI	WCCGGW	1 cut(s)	2069
Bsc4I	CCNNNNNNNGG	4 cut(s)	1483, 1508, 1580, 1796
Bse118I	RCCGGY	1 cut(s)	1440
Bse1I	ACTGG	8 cut(s)	402, 527, 1022, 1276, 1401, 1564, 1617, 1656
Bse21I	CCTNAGG	2 cut(s)	1008, 1589
Bse8I	GATNNNNATC	1 cut(s)	1495
BseBI	CCWGG	6 cut(s)	277, 558, 1266, 1303, 1390, 1844
BseDI	CCNNGG	4 cut(s)	990, 1248, 1843, 1990
BseGI	GGATG	3 cut(s)	757, 1111, 1808
BseJI	GATNNNNATC	1 cut(s)	1495
BseLI	CCNNNNNNNGG	4 cut(s)	1483, 1508, 1580, 1796
BseMII	CTCAG	6 cut(s)	318, 999, 1170, 1182, 1580, 2019
BseNI	ACTGG	8 cut(s)	402, 527, 1022, 1276, 1401, 1564, 1617, 1656
BseRI	GAGGAG	4 cut(s)	896, 899, 927, 1606
BseXI	GCAGC	4 cut(s)	323, 617, 937, 1584
BseYI	CCCAGC	1 cut(s)	1476
BsgI	GTGCAG	1 cut(s)	330
BshFI	GGCC	3 cut(s)	215, 779, 2052
BsiHKAI	GWGCWC	2 cut(s)	18, 922
BsiHKCI	CYCGRG	1 cut(s)	1247
BsiSI	CCGG	2 cut(s)	1441, 2070
BslFI	GGGAC	2 cut(s)	794, 1459
BslI	CCNNNNNNNGG	4 cut(s)	1483, 1508, 1580, 1796
BsmAI	GTCTC	3 cut(s)	260, 307, 1313
BsmBI	CGTCTC	1 cut(s)	1313
BsmFI	GGGAC	2 cut(s)	794, 1459
BsnI	GGCC	3 cut(s)	215, 779, 2052
Bso31I	GGTCTC	1 cut(s)	307
BsoBI	CYCGRG	1 cut(s)	1247
Bsp1286I	GDGCHC	4 cut(s)	18, 204, 529, 922
Bsp19I	CCATGG	1 cut(s)	1990
BspACI	CCGC	3 cut(s)	43, 97, 299
BspANI	GGCC	3 cut(s)	215, 779, 2052
BspCNI	CTCAG	6 cut(s)	317, 1000, 1171, 1183, 1581, 2018
BspLI	GGNNCC	2 cut(s)	1982, 2074
BspMAI	CTGCAG	1 cut(s)	1602
BspPI	GGATC	7 cut(s)	409, 488, 873, 1089, 1267, 1485, 1777
BspQI	GCTCTTC	1 cut(s)	192
BspTNI	GGTCTC	1 cut(s)	307
BsrFI	RCCGGY	1 cut(s)	1440
BsrI	ACTGG	8 cut(s)	402, 527, 1022, 1276, 1401, 1564, 1617, 1656
BssAI	RCCGGY	1 cut(s)	1440
BssECI	CCNNGG	4 cut(s)	990, 1248, 1843, 1990
BssT1I	CCWWGG	2 cut(s)	990, 1990
Bst2UI	CCWGG	6 cut(s)	277, 558, 1266, 1303, 1390, 1844
Bst4CI	ACNGT	2 cut(s)	339, 1473
Bst6I	CTCTTC	2 cut(s)	192, 258
BstBAI	YACGTR	1 cut(s)	1507
BstC8I	GCNNGC	3 cut(s)	777, 842, 1442
BstDSI	CCRYGG	1 cut(s)	1990
BstEII	GGTNACC	1 cut(s)	1583
BstF5I	GGATG	3 cut(s)	757, 1111, 1808
BstHHI	GCGC	2 cut(s)	190, 610
BstMAI	GTCTC	3 cut(s)	260, 307, 1313
BstMWI	GCNNNNNNNGC	7 cut(s)	234, 626, 785, 1340, 1349, 1747, 1931
BstNI	CCWGG	6 cut(s)	277, 558, 1266, 1303, 1390, 1844
BstNSI	RCATGY	1 cut(s)	1951
BstPI	GGTNACC	1 cut(s)	1583
BstSCI	CCNGG	6 cut(s)	275, 556, 1264, 1301, 1388, 1842
BstSFI	CTRYAG	3 cut(s)	1469, 1598, 1866
BstSNI	TACGTA	1 cut(s)	1507
BstV1I	GCAGC	4 cut(s)	323, 617, 937, 1584
BstV2I	GAAGAC	1 cut(s)	787
BstX2I	RGATCY	6 cut(s)	401, 597, 941, 1094, 1272, 1490
BstXI	CCANNNNNNTGG	2 cut(s)	1825, 1991
BstYI	RGATCY	6 cut(s)	401, 597, 941, 1094, 1272, 1490
Bsu36I	CCTNAGG	2 cut(s)	1008, 1589
BsuRI	GGCC	3 cut(s)	215, 779, 2052
BtgI	CCRYGG	1 cut(s)	1990
BtsCI	GGATG	3 cut(s)	757, 1111, 1808
BtsIMutI	CAGTG	4 cut(s)	1283, 1421, 1557, 1636
Cac8I	GCNNGC	3 cut(s)	777, 842, 1442
CfoI	GCGC	2 cut(s)	190, 610
Cfr10I	RCCGGY	1 cut(s)	1440
Cfr13I	GGNCC	4 cut(s)	554, 778, 901, 2072
CseI	GACGC	1 cut(s)	339
CsiI	ACCWGGT	1 cut(s)	1301
CviAII	CATG	8 cut(s)	734, 1089, 1364, 1948, 1991, 2011, 2083, 2127
DriI	GACNNNNNGTC	1 cut(s)	1471
Eam1104I	CTCTTC	2 cut(s)	192, 258
Eam1105I	GACNNNNNGTC	1 cut(s)	1471
EarI	CTCTTC	2 cut(s)	192, 258
Ecl136II	GAGCTC	1 cut(s)	16
Eco105I	TACGTA	1 cut(s)	1507
Eco130I	CCWWGG	2 cut(s)	990, 1990
Eco24I	GRGCYC	3 cut(s)	18, 204, 529
Eco31I	GGTCTC	1 cut(s)	307
Eco32I	GATATC	1 cut(s)	1567
Eco47I	GGWCC	3 cut(s)	554, 901, 2072
Eco53kI	GAGCTC	1 cut(s)	16
Eco57I	CTGAAG	4 cut(s)	216, 279, 930, 1612
Eco81I	CCTNAGG	2 cut(s)	1008, 1589
Eco88I	CYCGRG	1 cut(s)	1247
Eco91I	GGTNACC	1 cut(s)	1583
EcoICRI	GAGCTC	1 cut(s)	16
EcoO109I	RGGNCCY	1 cut(s)	554
EcoO65I	GGTNACC	1 cut(s)	1583
EcoRII	CCWGG	6 cut(s)	275, 556, 1264, 1301, 1388, 1842
EcoRV	GATATC	1 cut(s)	1567
EcoT14I	CCWWGG	2 cut(s)	990, 1990
EcoT38I	GRGCYC	3 cut(s)	18, 204, 529
ErhI	CCWWGG	2 cut(s)	990, 1990
Esp3I	CGTCTC	1 cut(s)	1313
FaeI	CATG	8 cut(s)	737, 1092, 1367, 1951, 1994, 2014, 2086, 2130
FaqI	GGGAC	2 cut(s)	794, 1459
FatI	CATG	8 cut(s)	733, 1088, 1363, 1947, 1990, 2010, 2082, 2126
FauI	CCCGC	1 cut(s)	50
FauNDI	CATATG	1 cut(s)	499
FbaI	TGATCA	1 cut(s)	480
Fnu4HI	GCNGC	4 cut(s)	312, 606, 951, 1598
FokI	GGATG	3 cut(s)	764, 1118, 1795
FriOI	GRGCYC	3 cut(s)	18, 204, 529
Fsp4HI	GCNGC	4 cut(s)	312, 606, 951, 1598
FspBI	CTAG	8 cut(s)	138, 549, 828, 1187, 1340, 1679, 1716, 1860
FspI	TGCGCA	1 cut(s)	189
GlaI	GCGC	2 cut(s)	189, 609
GluI	GCNGC	4 cut(s)	312, 606, 951, 1598
GsaI	CCCAGC	1 cut(s)	1480
GsuI	CTGGAG	2 cut(s)	1287, 1727
HaeIII	GGCC	3 cut(s)	215, 779, 2052
HapII	CCGG	2 cut(s)	1441, 2070
HgaI	GACGC	1 cut(s)	339
HhaI	GCGC	2 cut(s)	190, 610
Hin1II	CATG	8 cut(s)	737, 1092, 1367, 1951, 1994, 2014, 2086, 2130
Hin6I	GCGC	2 cut(s)	188, 608
HinP1I	GCGC	2 cut(s)	188, 608
HincII	GTYRAC	1 cut(s)	520
HindII	GTYRAC	1 cut(s)	520
HindIII	AAGCTT	2 cut(s)	1519, 1820
HinfI	GANTC	3 cut(s)	141, 452, 1397
HpaII	CCGG	2 cut(s)	1441, 2070
Hpy166II	GTNNAC	4 cut(s)	52, 520, 891, 1036
Hpy188I	TCNGA	4 cut(s)	406, 711, 1707, 2008
Hpy188III	TCNNGA	5 cut(s)	425, 904, 1156, 1528, 1744
Hpy8I	GTNNAC	4 cut(s)	52, 520, 891, 1036
Hpy99I	CGWCG	1 cut(s)	355
HpyAV	CCTTC	6 cut(s)	36, 422, 1120, 1636, 1800, 2033
HpyCH4III	ACNGT	2 cut(s)	339, 1473
HpyCH4IV	ACGT	1 cut(s)	1506
HpyF10VI	GCNNNNNNNGC	7 cut(s)	234, 626, 785, 1340, 1349, 1747, 1931
HpySE526I	ACGT	1 cut(s)	1506
Hsp92II	CATG	8 cut(s)	737, 1092, 1367, 1951, 1994, 2014, 2086, 2130
HspAI	GCGC	2 cut(s)	188, 608
KroI	GCCGGC	1 cut(s)	1440
KroNI	GCCGGC	1 cut(s)	1442
Ksp22I	TGATCA	1 cut(s)	480
LguI	GCTCTTC	1 cut(s)	192
LmnI	GCTCC	6 cut(s)	181, 187, 539, 712, 1324, 1746
Lsp1109I	GCAGC	4 cut(s)	323, 617, 937, 1584
LweI	GCATC	5 cut(s)	644, 962, 967, 1453, 1737
MabI	ACCWGGT	1 cut(s)	1301
MaeI	CTAG	8 cut(s)	138, 549, 828, 1187, 1340, 1679, 1716, 1860
MaeII	ACGT	1 cut(s)	1506
MaeIII	GTNAC	6 cut(s)	674, 1182, 1208, 1288, 1403, 1583
MboII	GAAGA	9 cut(s)	209, 272, 275, 292, 787, 936, 951, 1017, 1142
MfeI	CAATTG	3 cut(s)	1481, 1722, 1830
MflI	RGATCY	6 cut(s)	401, 597, 941, 1094, 1272, 1490
MhlI	GDGCHC	4 cut(s)	18, 204, 529, 922
MmeI	TCCRAC	1 cut(s)	561
MroNI	GCCGGC	1 cut(s)	1440
MroXI	GAANNNNTTC	4 cut(s)	322, 943, 1985, 2060
MseI	TTAA	7 cut(s)	287, 291, 624, 821, 996, 1214, 1607
MslI	CAYNNNNRTG	1 cut(s)	2081
MspA1I	CMGCKG	3 cut(s)	314, 775, 950
MspI	CCGG	2 cut(s)	1441, 2070
MspR9I	CCNGG	6 cut(s)	277, 558, 1266, 1303, 1390, 1844
MunI	CAATTG	3 cut(s)	1481, 1722, 1830
MvaI	CCWGG	6 cut(s)	277, 558, 1266, 1303, 1390, 1844
MwoI	GCNNNNNNNGC	7 cut(s)	234, 626, 785, 1340, 1349, 1747, 1931
NaeI	GCCGGC	1 cut(s)	1442
NcoI	CCATGG	1 cut(s)	1990
NdeI	CATATG	1 cut(s)	499
NgoMIV	GCCGGC	1 cut(s)	1440
NlaIII	CATG	8 cut(s)	737, 1092, 1367, 1951, 1994, 2014, 2086, 2130
NlaIV	GGNNCC	2 cut(s)	1982, 2074
NmeAIII	GCCGAG	1 cut(s)	241
NmuCI	GTSAC	4 cut(s)	1208, 1288, 1403, 1583
NsbI	TGCGCA	1 cut(s)	189
NspI	RCATGY	1 cut(s)	1951
PacI	TTAATTAA	1 cut(s)	291
PciI	ACATGT	1 cut(s)	1947
PciSI	GCTCTTC	1 cut(s)	192
PdiI	GCCGGC	1 cut(s)	1442
PdmI	GAANNNNTTC	4 cut(s)	322, 943, 1985, 2060
PfeI	GAWTC	3 cut(s)	141, 452, 1397
PflMI	CCANNNNNTGG	2 cut(s)	1483, 1580
PfoI	TCCNGGA	4 cut(s)	275, 556, 1264, 1388
PkrI	GCNGC	4 cut(s)	313, 607, 952, 1599
Ppu21I	YACGTR	1 cut(s)	1507
PpuMI	RGGWCCY	1 cut(s)	554
PscI	ACATGT	1 cut(s)	1947
PshBI	ATTAAT	2 cut(s)	287, 291
Psp124BI	GAGCTC	1 cut(s)	18
Psp5II	RGGWCCY	1 cut(s)	554
Psp6I	CCWGG	6 cut(s)	275, 556, 1264, 1301, 1388, 1842
PspEI	GGTNACC	1 cut(s)	1583
PspFI	CCCAGC	1 cut(s)	1476
PspGI	CCWGG	6 cut(s)	275, 556, 1264, 1301, 1388, 1842
PspN4I	GGNNCC	2 cut(s)	1982, 2074
PspPI	GGNCC	4 cut(s)	554, 778, 901, 2072
PspPPI	RGGWCCY	1 cut(s)	554
PsrI	GAACNNNNNNTAC	2 cut(s)	1846, 1878
PstI	CTGCAG	1 cut(s)	1602
PsuI	RGATCY	6 cut(s)	401, 597, 941, 1094, 1272, 1490
PvuII	CAGCTG	3 cut(s)	314, 775, 950
RseI	CAYNNNNRTG	1 cut(s)	2081
SacI	GAGCTC	1 cut(s)	18
SapI	GCTCTTC	1 cut(s)	192
SaqAI	TTAA	7 cut(s)	287, 291, 624, 821, 996, 1214, 1607
SatI	GCNGC	4 cut(s)	312, 606, 951, 1598
Sau96I	GGNCC	4 cut(s)	554, 778, 901, 2072
ScrFI	CCNGG	6 cut(s)	277, 558, 1266, 1303, 1390, 1844
SduI	GDGCHC	4 cut(s)	18, 204, 529, 922
SexAI	ACCWGGT	1 cut(s)	1301
SfaNI	GCATC	5 cut(s)	644, 962, 967, 1453, 1737
SfcI	CTRYAG	3 cut(s)	1469, 1598, 1866
SinI	GGWCC	3 cut(s)	554, 901, 2072
SmiMI	CAYNNNNRTG	1 cut(s)	2081
SmlI	CTYRAG	2 cut(s)	1154, 1526
SmoI	CTYRAG	2 cut(s)	1154, 1526
SnaBI	TACGTA	1 cut(s)	1507
SsiI	CCGC	3 cut(s)	43, 97, 299
SspMI	CTAG	8 cut(s)	138, 549, 828, 1187, 1340, 1679, 1716, 1860
SstI	GAGCTC	1 cut(s)	18
StyD4I	CCNGG	6 cut(s)	275, 556, 1264, 1301, 1388, 1842
StyI	CCWWGG	2 cut(s)	990, 1990
TaaI	ACNGT	2 cut(s)	339, 1473
TaiI	ACGT	1 cut(s)	1509
TaqI	TCGA	2 cut(s)	426, 968
TfiI	GAWTC	3 cut(s)	141, 452, 1397
Tru1I	TTAA	7 cut(s)	287, 291, 624, 821, 996, 1214, 1607
Tru9I	TTAA	7 cut(s)	287, 291, 624, 821, 996, 1214, 1607
TscAI	CASTG	4 cut(s)	1283, 1421, 1564, 1636
TseFI	GTSAC	4 cut(s)	1208, 1288, 1403, 1583
TseI	GCWGC	4 cut(s)	311, 605, 950, 1597
Tsp45I	GTSAC	4 cut(s)	1208, 1288, 1403, 1583
TspDTI	ATGAA	9 cut(s)	18, 722, 768, 1131, 1380, 1410, 1797, 1927, 2053
TspGWI	ACGGA	2 cut(s)	1059, 1337
TspRI	CASTG	4 cut(s)	1283, 1421, 1564, 1636
Van91I	CCANNNNNTGG	2 cut(s)	1483, 1580
VpaK11BI	GGWCC	3 cut(s)	554, 901, 2072
VspI	ATTAAT	2 cut(s)	287, 291
XapI	RAATTY	4 cut(s)	727, 1136, 1710, 2060
XceI	RCATGY	1 cut(s)	1951
XcmI	CCANNNNNNNNNTGG	1 cut(s)	988
XmnI	GAANNNNTTC	4 cut(s)	322, 943, 1985, 2060
XspI	CTAG	8 cut(s)	138, 549, 828, 1187, 1340, 1679, 1716, 1860

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.