Rmu_sc0000634.1_g000007

Iaa-amino acid hydrolase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000634.1
Physical Location & Seq
Reverse (-)
35931 .. 39088
3158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000634.1_g000007.1.cds

Sequence Viewer

Length: 1623 bp
atgggtgaggtcatgcacgctgggtgcgagcggtggaggaggtggatgtcggactcgtctggtttcgcagtggtcttctcctggtcgtgtggtcgctgctccttccggtttggctggaacttgaaggacgagggcttcttccttcttttctggactggatcgacgtggtggatgcaggtggcgttggtggtcaacgacgagtactctggcgggcatccaggagggtttggccgggttcatggtttgcggctgatgtgttgggcctcattttgggctgccactactatcatctttcttagcaaatcccagcaatgcaagcagattcatgatatgaatccttgttcgattttcaattcacttctagttttacatctctcactttcttccttttgtgtcatccatggcactcgggaccaaaactacggagaagagattctaaacgcagcccagaaagacaaaaactggttggtctcaataagaaggcaaatccatgaaaacccagaactcggattccaagagcacaacaccagtgctcttctacgcagagagctggaccaacttggcatctcttactcgtacccaattgccaaaactggtattgtggccgaaattgggtccggttctggcccggttgttgctcttcgggctgacatggacgccctccctatgcaagagcttgttgattgggagcacaagagtaagattgatgggaaaatgcacggttgtggtcatgatgctcacaccactatgcttctaggcgctgccaagttgcttagtcaacggaaagagaaacttcagggtactgttagacttatttttcaacctgctgaggagggaggtgctggagcagctgagatgataaaagagggtgctcttggtgaagcggaagcaatatttgggatgcacgtcgattatatgatacccacaggaagcatagcatccatggcagggccacacttggctgctgttagcttctttgaagcaaaaataatcggtgaaggtgggcatgctgcagctccccatatcactactgacccaatactcgctgcctcttttgcaatttcagcattgcagcagctcatctcaagagaaactgatcccctccaaagtcaagttctgtctgtcacttatgttcgaggagggacggcatccaatgtaattccagcctatgttgaatttgggggcacattgaggagtcttacaacggaaggcttgtaccaactcatgaggcgattgaaagaggttattgaagggcaggcagctgtgcatagatgtattgcatacgttgacatgaaaagtgaagagtttcccccataccctgctgttttcaatgacgaaagcttgaattcacatgtaaagagggttggaaaacttgtgcttggtcctgagaatgtgaaggtcgccaaaaaagtgatggcaggtgaagactttgctttctatcaagaatcgattcctggaatcatgatcggcatcggaataagaaatgaggaagtgggttcagtttactcaccgcactccccttacttctttcttgatgaggacgtccttcccgtcggggcagcattacatactgccttggctgagatttacttgaacgagcaccaacattccgctgttcagtga
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

540

Amino Acids

59.38

Weight (kDa)

5.87

Isoelectric Point (pI)

41.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 166, 1409
AatII GACGTC 1 cut(s) 1545
Acc36I ACCTGC 3 cut(s) 166, 832, 1409
AccBSI CCGCTC 1 cut(s) 31
AciI CCGC 6 cut(s) 31, 210, 247, 884, 1511, 1611
AclWI GGATC 2 cut(s) 166, 1091
AcoI YGGCCR 2 cut(s) 229, 603
AcsI RAATTY 2 cut(s) 1175, 1345
AcuI CTGAAG 1 cut(s) 779
AcyI GRCGYC 2 cut(s) 657, 1542
AfaI GTAC 4 cut(s) 203, 578, 802, 1217
AfiI CCNNNNNNNGG 4 cut(s) 270, 506, 612, 948
AflIII ACRYGT 1 cut(s) 1351
AjiI CACGTC 2 cut(s) 165, 907
AjnI CCWGG 3 cut(s) 80, 217, 1453
AjuI GAANNNNNNNTTGG 4 cut(s) 879, 911, 1098, 1130
AleI CACNNNNGTG 1 cut(s) 723
AloI GAACNNNNNNTCC 2 cut(s) 495, 527
AluBI AGCT 8 cut(s) 550, 676, 851, 972, 1016, 1078, 1262, 1341
AluI AGCT 8 cut(s) 550, 676, 851, 972, 1016, 1078, 1262, 1341
Alw21I GWGCWC 5 cut(s) 522, 535, 693, 874, 1602
Alw26I GTCTC 1 cut(s) 475
AlwI GGATC 2 cut(s) 166, 1091
Ama87I CYCGRG 1 cut(s) 408
AoxI GGCC 5 cut(s) 229, 261, 603, 625, 950
ApoI RAATTY 2 cut(s) 1175, 1345
Asp700I GAANNNNTTC 3 cut(s) 432, 1305, 1449
AspLEI GCGC 1 cut(s) 761
AspS9I GGNCC 7 cut(s) 261, 412, 553, 615, 626, 950, 1382
AsuC2I CCSGG 2 cut(s) 233, 629
AsuHPI GGTGA 5 cut(s) 17, 890, 1007, 1433, 1500
AvaI CYCGRG 1 cut(s) 408
AvaII GGWCC 4 cut(s) 412, 553, 615, 1382
BaeGI GKGCMC 1 cut(s) 1187
BbsI GAAGAC 2 cut(s) 67, 1431
Bbv12I GWGCWC 5 cut(s) 522, 535, 693, 874, 1602
BbvCI CCTCAGC 1 cut(s) 828
BccI CCATC 2 cut(s) 701, 1408
BceAI ACGGC 1 cut(s) 1161
BciT130I CCWGG 3 cut(s) 82, 219, 1455
BcnI CCSGG 2 cut(s) 233, 629
BcoDI GTCTC 1 cut(s) 475
BfaI CTAG 2 cut(s) 362, 755
BfmI CTRYAG 1 cut(s) 1011
BfoI RGCGCY 1 cut(s) 762
BfuAI ACCTGC 3 cut(s) 166, 832, 1409
BmcAI AGTACT 1 cut(s) 203
Bme1390I CCNGG 5 cut(s) 82, 219, 233, 629, 1455
Bme18I GGWCC 4 cut(s) 412, 553, 615, 1382
BmeT110I CYCGRG 1 cut(s) 408
BmgBI CACGTC 2 cut(s) 165, 907
BmgT120I GGNCC 7 cut(s) 261, 412, 553, 615, 626, 950, 1382
BmiI GGNNCC 2 cut(s) 413, 616
BmrFI CCNGG 5 cut(s) 82, 219, 233, 629, 1455
BmsI GCATC 8 cut(s) 162, 223, 573, 724, 891, 947, 1157, 1479
BpiI GAAGAC 2 cut(s) 67, 1431
BpmI CTGGAG 1 cut(s) 864
Bpu10I CCTNAGC 1 cut(s) 828
BpuEI CTTGAG 1 cut(s) 1069
BpuMI CCSGG 2 cut(s) 233, 629
Bsa29I ATCGAT 1 cut(s) 1448
BsaBI GATNNNNATC 2 cut(s) 333, 1469
BsaHI GRCGYC 2 cut(s) 657, 1542
BsaI GGTCTC 1 cut(s) 475
BsaJI CCNNGG 3 cut(s) 400, 942, 1575
BsaWI WCCGGW 2 cut(s) 105, 617
Bsc4I CCNNNNNNNGG 4 cut(s) 270, 506, 612, 948
Bse1I ACTGG 4 cut(s) 160, 467, 528, 598
Bse3DI GCAATG 2 cut(s) 317, 1067
Bse8I GATNNNNATC 2 cut(s) 333, 1469
BseBI CCWGG 3 cut(s) 82, 219, 1455
BseCI ATCGAT 1 cut(s) 1448
BseDI CCNNGG 3 cut(s) 400, 942, 1575
BseGI GGATG 7 cut(s) 51, 177, 214, 396, 906, 938, 1148
BseJI GATNNNNATC 2 cut(s) 333, 1469
BseLI CCNNNNNNNGG 4 cut(s) 270, 506, 612, 948
BseMI GCAATG 2 cut(s) 317, 1067
BseMII CTCAG 4 cut(s) 819, 843, 1377, 1572
BseNI ACTGG 4 cut(s) 160, 467, 528, 598
BseRI GAGGAG 4 cut(s) 52, 845, 1152, 1207
BseSI GKGCMC 1 cut(s) 1187
BseYI CCCAGC 2 cut(s) 20, 306
BshFI GGCC 5 cut(s) 231, 263, 605, 627, 952
BshVI ATCGAT 1 cut(s) 1448
BsiHKAI GWGCWC 5 cut(s) 522, 535, 693, 874, 1602
BsiHKCI CYCGRG 1 cut(s) 408
BsiSI CCGG 4 cut(s) 106, 232, 618, 629
BslFI GGGAC 2 cut(s) 425, 1156
BslI CCNNNNNNNGG 4 cut(s) 270, 506, 612, 948
BsmAI GTCTC 1 cut(s) 475
BsmFI GGGAC 2 cut(s) 425, 1156
BsnI GGCC 5 cut(s) 231, 263, 605, 627, 952
Bso31I GGTCTC 1 cut(s) 475
BsoBI CYCGRG 1 cut(s) 408
Bsp1286I GDGCHC 6 cut(s) 522, 535, 693, 874, 1187, 1602
Bsp143I GATC 3 cut(s) 158, 1096, 1464
Bsp19I CCATGG 2 cut(s) 400, 942
BspACI CCGC 6 cut(s) 31, 210, 247, 884, 1511, 1611
BspANI GGCC 5 cut(s) 231, 263, 605, 627, 952
BspCNI CTCAG 4 cut(s) 820, 844, 1378, 1573
BspDI ATCGAT 1 cut(s) 1448
BspHI TCATGA 4 cut(s) 325, 730, 1224, 1461
BspLI GGNNCC 2 cut(s) 413, 616
BspMAI CTGCAG 1 cut(s) 1015
BspMI ACCTGC 3 cut(s) 166, 832, 1409
BspPI GGATC 2 cut(s) 166, 1091
BspQI GCTCTTC 2 cut(s) 540, 645
BspTNI GGTCTC 1 cut(s) 475
BsrBI CCGCTC 1 cut(s) 31
BsrDI GCAATG 2 cut(s) 317, 1067
BsrI ACTGG 4 cut(s) 160, 467, 528, 598
BssECI CCNNGG 3 cut(s) 400, 942, 1575
BssMI GATC 3 cut(s) 158, 1096, 1464
BssNI GRCGYC 2 cut(s) 657, 1542
BssT1I CCWWGG 3 cut(s) 400, 942, 1575
Bst2UI CCWGG 3 cut(s) 82, 219, 1455
Bst4CI ACNGT 2 cut(s) 722, 805
Bst6I CTCTTC 4 cut(s) 423, 540, 645, 1296
BstACI GRCGYC 2 cut(s) 657, 1542
BstC8I GCNNGC 6 cut(s) 18, 29, 212, 317, 1008, 1257
BstDEI CTNAG 6 cut(s) 296, 773, 828, 852, 1386, 1581
BstDSI CCRYGG 2 cut(s) 400, 942
BstF5I GGATG 7 cut(s) 51, 177, 214, 396, 906, 938, 1148
BstH2I RGCGCY 1 cut(s) 762
BstHHI GCGC 1 cut(s) 761
BstKTI GATC 3 cut(s) 161, 1099, 1467
BstMAI GTCTC 1 cut(s) 475
BstMBI GATC 3 cut(s) 158, 1096, 1464
BstMWI GCNNNNNNNGC 6 cut(s) 316, 644, 848, 944, 1055, 1064
BstNI CCWGG 3 cut(s) 82, 219, 1455
BstNSI RCATGY 2 cut(s) 1010, 1355
BstSCI CCNGG 5 cut(s) 80, 217, 231, 627, 1453
BstSFI CTRYAG 1 cut(s) 1011
BstSLI GKGCMC 1 cut(s) 1187
BstV2I GAAGAC 2 cut(s) 67, 1431
Bsu15I ATCGAT 1 cut(s) 1448
BsuRI GGCC 5 cut(s) 231, 263, 605, 627, 952
BsuTUI ATCGAT 1 cut(s) 1448
BtgI CCRYGG 2 cut(s) 400, 942
BtrI CACGTC 2 cut(s) 165, 907
BtsCI GGATG 7 cut(s) 51, 177, 214, 396, 906, 938, 1148
BtsI GCAGTG 1 cut(s) 75
BtsIMutI CAGTG 2 cut(s) 75, 535
BveI ACCTGC 3 cut(s) 166, 832, 1409
Cac8I GCNNGC 6 cut(s) 18, 29, 212, 317, 1008, 1257
CciI TCATGA 4 cut(s) 325, 730, 1224, 1461
CfoI GCGC 1 cut(s) 761
Cfr13I GGNCC 7 cut(s) 261, 412, 553, 615, 626, 950, 1382
ClaI ATCGAT 1 cut(s) 1448
CseI GACGC 1 cut(s) 665
Csp6I GTAC 4 cut(s) 202, 577, 801, 1216
CviQI GTAC 4 cut(s) 202, 577, 801, 1216
DdeI CTNAG 6 cut(s) 296, 773, 828, 852, 1386, 1581
DpnI GATC 3 cut(s) 160, 1098, 1466
DpnII GATC 3 cut(s) 158, 1096, 1464
EaeI YGGCCR 2 cut(s) 229, 603
Eam1104I CTCTTC 4 cut(s) 423, 540, 645, 1296
EarI CTCTTC 4 cut(s) 423, 540, 645, 1296
Eco130I CCWWGG 3 cut(s) 400, 942, 1575
Eco31I GGTCTC 1 cut(s) 475
Eco47I GGWCC 4 cut(s) 412, 553, 615, 1382
Eco57I CTGAAG 1 cut(s) 779
Eco88I CYCGRG 1 cut(s) 408
EcoRI GAATTC 1 cut(s) 1345
EcoRII CCWGG 3 cut(s) 80, 217, 1453
EcoT14I CCWWGG 3 cut(s) 400, 942, 1575
ErhI CCWWGG 3 cut(s) 400, 942, 1575
FalI AAGNNNNNCTT 2 cut(s) 777, 809
FaqI GGGAC 2 cut(s) 425, 1156
FauI CCCGC 1 cut(s) 203
FokI GGATG 7 cut(s) 58, 184, 201, 383, 913, 925, 1135
FspBI CTAG 2 cut(s) 362, 755
GlaI GCGC 1 cut(s) 760
GsaI CCCAGC 2 cut(s) 24, 310
GsuI CTGGAG 1 cut(s) 864
HaeII RGCGCY 1 cut(s) 762
HaeIII GGCC 5 cut(s) 231, 263, 605, 627, 952
HapII CCGG 4 cut(s) 106, 232, 618, 629
HgaI GACGC 1 cut(s) 665
HhaI GCGC 1 cut(s) 761
Hin1I GRCGYC 2 cut(s) 657, 1542
Hin6I GCGC 1 cut(s) 759
HinP1I GCGC 1 cut(s) 759
HincII GTYRAC 3 cut(s) 193, 779, 1288
HindII GTYRAC 3 cut(s) 193, 779, 1288
HindIII AAGCTT 1 cut(s) 1339
HinfI GANTC 9 cut(s) 53, 322, 334, 433, 510, 1195, 1445, 1450, 1458
HpaII CCGG 4 cut(s) 106, 232, 618, 629
HphI GGTGA 5 cut(s) 17, 890, 1007, 1433, 1500
Hpy166II GTNNAC 4 cut(s) 193, 779, 1288, 1504
Hpy188I TCNGA 3 cut(s) 52, 509, 1475
Hpy8I GTNNAC 4 cut(s) 193, 779, 1288, 1504
Hpy99I CGWCG 4 cut(s) 166, 200, 911, 1556
HpyAV CCTTC 9 cut(s) 112, 118, 152, 474, 992, 1202, 1244, 1390, 1556
HpyCH4III ACNGT 2 cut(s) 722, 805
HpyCH4IV ACGT 4 cut(s) 164, 906, 1284, 1542
HpyF10VI GCNNNNNNNGC 6 cut(s) 316, 644, 848, 944, 1055, 1064
HpyF3I CTNAG 6 cut(s) 296, 773, 828, 852, 1386, 1581
HpySE526I ACGT 4 cut(s) 164, 906, 1284, 1542
Hsp92I GRCGYC 2 cut(s) 657, 1542
HspAI GCGC 1 cut(s) 759
Kzo9I GATC 3 cut(s) 158, 1096, 1464
LguI GCTCTTC 2 cut(s) 540, 645
LmnI GCTCC 4 cut(s) 104, 688, 845, 1021
LweI GCATC 8 cut(s) 162, 223, 573, 724, 891, 947, 1157, 1479
MaeI CTAG 2 cut(s) 362, 755
MaeII ACGT 4 cut(s) 164, 906, 1284, 1542
MaeIII GTNAC 1 cut(s) 1123
MalI GATC 3 cut(s) 160, 1098, 1466
MbiI CCGCTC 1 cut(s) 31
MboI GATC 3 cut(s) 158, 1096, 1464
MboII GAAGA 8 cut(s) 67, 130, 375, 440, 527, 632, 1313, 1436
MfeI CAATTG 1 cut(s) 582
MhlI GDGCHC 6 cut(s) 522, 535, 693, 874, 1187, 1602
MluCI AATT 7 cut(s) 352, 582, 609, 1059, 1158, 1175, 1345
MlyI GAGTC 2 cut(s) 47, 1204
MmeI TCCRAC 2 cut(s) 30, 1345
MroXI GAANNNNTTC 3 cut(s) 432, 1305, 1449
MslI CAYNNNNRTG 2 cut(s) 723, 746
MspA1I CMGCKG 3 cut(s) 851, 1262, 1613
MspI CCGG 4 cut(s) 106, 232, 618, 629
MspR9I CCNGG 5 cut(s) 82, 219, 233, 629, 1455
MunI CAATTG 1 cut(s) 582
MvaI CCWGG 3 cut(s) 82, 219, 1455
MwoI GCNNNNNNNGC 6 cut(s) 316, 644, 848, 944, 1055, 1064
NciI CCSGG 2 cut(s) 233, 629
NcoI CCATGG 2 cut(s) 400, 942
NdeII GATC 3 cut(s) 158, 1096, 1464
NlaIV GGNNCC 2 cut(s) 413, 616
NmuCI GTSAC 1 cut(s) 1123
NspI RCATGY 2 cut(s) 1010, 1355
OliI CACNNNNGTG 1 cut(s) 723
PaeI GCATGC 1 cut(s) 1010
PagI TCATGA 4 cut(s) 325, 730, 1224, 1461
PaqCI CACCTGC 2 cut(s) 166, 1409
PciI ACATGT 1 cut(s) 1351
PciSI GCTCTTC 2 cut(s) 540, 645
PcsI WCGNNNNNNNCGW 2 cut(s) 24, 1548
PdmI GAANNNNTTC 3 cut(s) 432, 1305, 1449
PfeI GAWTC 7 cut(s) 322, 334, 433, 510, 1445, 1450, 1458
PfoI TCCNGGA 2 cut(s) 217, 1453
PleI GAGTC 2 cut(s) 47, 1203
PpsI GAGTC 2 cut(s) 47, 1203
PscI ACATGT 1 cut(s) 1351
Psp6I CCWGG 3 cut(s) 80, 217, 1453
PspFI CCCAGC 2 cut(s) 20, 306
PspGI CCWGG 3 cut(s) 80, 217, 1453
PspN4I GGNNCC 2 cut(s) 413, 616
PspPI GGNCC 7 cut(s) 261, 412, 553, 615, 626, 950, 1382
PstI CTGCAG 1 cut(s) 1015
PvuII CAGCTG 2 cut(s) 851, 1262
RsaI GTAC 4 cut(s) 203, 578, 802, 1217
RsaNI GTAC 4 cut(s) 202, 577, 801, 1216
RseI CAYNNNNRTG 2 cut(s) 723, 746
SapI GCTCTTC 2 cut(s) 540, 645
Sau3AI GATC 3 cut(s) 158, 1096, 1464
Sau96I GGNCC 7 cut(s) 261, 412, 553, 615, 626, 950, 1382
ScaI AGTACT 1 cut(s) 203
SchI GAGTC 2 cut(s) 47, 1204
ScrFI CCNGG 5 cut(s) 82, 219, 233, 629, 1455
SduI GDGCHC 6 cut(s) 522, 535, 693, 874, 1187, 1602
SfaNI GCATC 8 cut(s) 162, 223, 573, 724, 891, 947, 1157, 1479
SfcI CTRYAG 1 cut(s) 1011
SinI GGWCC 4 cut(s) 412, 553, 615, 1382
SmiMI CAYNNNNRTG 2 cut(s) 723, 746
SmlI CTYRAG 1 cut(s) 1084
SmoI CTYRAG 1 cut(s) 1084
SphI GCATGC 1 cut(s) 1010
Sse9I AATT 7 cut(s) 352, 582, 609, 1059, 1158, 1175, 1345
SsiI CCGC 6 cut(s) 31, 210, 247, 884, 1511, 1611
SspI AATATT 1 cut(s) 894
SspMI CTAG 2 cut(s) 362, 755
StyD4I CCNGG 5 cut(s) 80, 217, 231, 627, 1453
StyI CCWWGG 3 cut(s) 400, 942, 1575
TaaI ACNGT 2 cut(s) 722, 805
TaiI ACGT 4 cut(s) 167, 909, 1287, 1545
TaqI TCGA 5 cut(s) 161, 344, 909, 1135, 1448
TasI AATT 7 cut(s) 352, 582, 609, 1059, 1158, 1175, 1345
TatI WGTACW 1 cut(s) 201
TauI GCSGC 1 cut(s) 250
TfiI GAWTC 7 cut(s) 322, 334, 433, 510, 1445, 1450, 1458
TscAI CASTG 2 cut(s) 75, 535
TseFI GTSAC 1 cut(s) 1123
Tsp45I GTSAC 1 cut(s) 1123
TspDTI ATGAA 5 cut(s) 227, 314, 347, 507, 1307
TspGWI ACGGA 3 cut(s) 438, 796, 1220
TspRI CASTG 2 cut(s) 75, 535
VpaK11BI GGWCC 4 cut(s) 412, 553, 615, 1382
XapI RAATTY 2 cut(s) 1175, 1345
XceI RCATGY 2 cut(s) 1010, 1355
XcmI CCANNNNNNNNNTGG 1 cut(s) 1411
XmnI GAANNNNTTC 3 cut(s) 432, 1305, 1449
XspI CTAG 2 cut(s) 362, 755
ZraI GACGTC 1 cut(s) 1543
ZrmI AGTACT 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.