Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008563.1

Orthogroup ID

OG0010280

Physical Location & Seq

Genomic Coordinates Forward (+)

75730 .. 80673

Gene Structure 4944 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008563.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2193 bp

atggcatgcgcaacagacagtagggtttccattatcgtgctactagtactagtgctagcagcagcagctcttgctcataatgaaggtgatgatcatgcaacgcctccgattcggtctccaaatccaccatcgccatcatcagatggttcgggttctgctgaaccggagggtttagttgatttaggtctatgtgccattcaatgtggtgctaagtgttttggtcgcaaggcatccctgatttcacctgataagtttcgctttcccaaaattcattttggtggagctatttgttttggtacatgcatgctagagtgcaccatgaaccaggggaatgtgaagcctgagctctatcattgtacacttggatgtgcttataagtttgctgctaaaacaaaattaactggttcagatgctcatagaggaaataactatttgggttcttgctacaacaagtgcgagaagaactatcaagcggcttgtgagacgatgggtgaggtcatgcacgctgggttcgagcggtggaggaggtggatgtcggacttgtctggtttcgcagtggtcttctcctggtcgtgtggtcgctgctccttccggtttggctggaacttgaaggacgagggcttcttccttcttttctggactggatcgacgtggtggatgcaggtggcattggtggtcaacggcgagtactctggcgggcatccaggagggtttggccgggttcatggtttgcggctgatgtgttgggcctcattttggcatagtgtacgtggtaagcgcttcagaagcgtgaggattgcactctgtttcagtcaacgagcccctcttctctatcaattacaggctgccactactatcatctttcttagcaaatcccagcaatgcaagcagattcatgatatgaatccttgttcgattttcaattcacttctagttttacatctctcactttctcccttttgtgtcatccatggcactcgggaccaaaactacggagaagagattctaaacgcagcccagaaagacaaaaactggttggtctcaataagaaggcaaatccatgaaaacccagaactcggattccaagagcacaacaccagtgctcttctacgcagagagctggaccaacttggcatctcttactcgtacccaattgccaaaactggtattgtggccgaaattgggtccggttctggcccggttgttgctcttcgggctgacatggacgccctccctatgcaagagcttgttgattgggagcacaagagtaagattgatgggaaaatgcacggttgtggtcatgatgctcacaccactatgcttctaggcgctgccaagttgcttagtcaacggaaagagaaacttcagggtactgttagacttatttttcaacctgctgaggagggaggtgctggagcagctgagatgataaaagagggtgctcttggtgaagcggaagcaatatttgggatgcacgtcgattatatgatacccacaggaagcatagcatccatggcagggccacacttggctgctgttagcttctttgaagcaaaaataatcggtgaaggtgggcatgctgcagctccccatatcactactgacccaatactcgctgcctcttttgcaatttcagcattgcagcagctcatctcaagagaaactgatcccctccaaagtcaagtcctgtctgtcacttatgttcgaggagggacggcatccaatgtaattccagcctatgttgaatttgggggcacattgaggagtcttacaacggaaggcttgtaccaactcatgaggcgattgaaagaggttattgaagggcaggcagctgtgcatagatgtattgcatacgttgacatgaaaagtgaagagtttcccccataccctgctgttttcaatgacgaaagcttgaattcacatgtaaagagggttggaaaacttgtgcttggtcctgagaatgtgaaggtcgccaaaaaagtgatggcaggtgaagactttgctttctatcaagaatcgattcctggaatcatgatcggcatcggaataagaaatgaggaagtgggttcagtttactcaccgcactccccttacttctttcttgatgaggacgtccttcccgtcggggcagcattacatactgccttggctgagatttacttgaacgagcaccaacattccgctgttcagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0008150 GO:0008152 GO:0009850 GO:0009987 GO:0010178 GO:0010817 GO:0016787 GO:0016810 GO:0042445 GO:0044237 GO:0065007 GO:0065008

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

M20_dimer Peptidase_M20

Protein Analysis

730

Amino Acids

79.8

Weight (kDa)

6.55

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010280)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G54140
fragaria_vesca	FvH4_7g33061
malus_domestica	MD01G1229800.v1.1
prunus_persica	Prupe.2G320500_v2.0.a1 Prupe.2G320500_v2.0.a1 Prupe.2G320500_v2.0.a1 Prupe.2G320500_v2.0.a1
pyrus_communis	pycom01g23790
rosa_chinensis	RchiOBHm_Chr1g0383081
rosa_laevigata	RLG00000026134
rosa_multiflora	Rmu_sc0000634.1_g000007 Rmu_sc0008563.1_g000015 Rmu_sc0033623.1_g000003
rosa_roxburghii	Rroxscaffold_4G00277630
rosa_rugosa	Rorug01G0438200 Rorug01G0438300
rosa_samantha	Rh1AG463900 Rh1BG421100 Rh1CG434600 Rh1DG453700
rosa_wichuraiana	Rw1G040830

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	375
AarI	CACCTGC	2 cut(s)	652, 1979
AatII	GACGTC	1 cut(s)	2115
Acc16I	TGCGCA	1 cut(s)	10
Acc36I	ACCTGC	3 cut(s)	652, 1402, 1979
AccBSI	CCGCTC	1 cut(s)	517
AciI	CCGC	7 cut(s)	473, 517, 696, 733, 1454, 2081, 2181
AclWI	GGATC	2 cut(s)	652, 1661
AcoI	YGGCCR	2 cut(s)	715, 1173
AcsI	RAATTY	3 cut(s)	267, 1745, 1915
AcuI	CTGAAG	2 cut(s)	766, 1349
AcyI	GRCGYC	2 cut(s)	1227, 2112
AfaI	GTAC	8 cut(s)	48, 298, 358, 689, 768, 1148, 1372, 1787
AfeI	AGCGCT	1 cut(s)	779
AfiI	CCNNNNNNNGG	4 cut(s)	756, 1076, 1182, 1518
AflIII	ACRYGT	1 cut(s)	1921
AhlI	ACTAGT	2 cut(s)	43, 49
AjiI	CACGTC	2 cut(s)	651, 1477
AjnI	CCWGG	4 cut(s)	324, 566, 703, 2023
AjuI	GAANNNNNNNTTGG	2 cut(s)	1449, 1481
AleI	CACNNNNGTG	1 cut(s)	1293
AloI	GAACNNNNNNTCC	2 cut(s)	1065, 1097
Alw21I	GWGCWC	7 cut(s)	317, 348, 1092, 1105, 1263, 1444, 2172
Alw26I	GTCTC	3 cut(s)	120, 476, 1045
Alw44I	GTGCAC	1 cut(s)	313
AlwI	GGATC	2 cut(s)	652, 1661
Ama87I	CYCGRG	1 cut(s)	978
Aor51HI	AGCGCT	1 cut(s)	779
AoxI	GGCC	5 cut(s)	715, 747, 1173, 1195, 1520
ApaLI	GTGCAC	1 cut(s)	313
ApoI	RAATTY	3 cut(s)	267, 1745, 1915
Asp700I	GAANNNNTTC	3 cut(s)	1002, 1875, 2019
AspLEI	GCGC	3 cut(s)	11, 780, 1331
AspS9I	GGNCC	7 cut(s)	747, 982, 1123, 1185, 1196, 1520, 1952
AsuC2I	CCSGG	2 cut(s)	719, 1199
AsuHPI	GGTGA	7 cut(s)	98, 234, 503, 1460, 1577, 2003, 2070
AsuNHI	GCTAGC	1 cut(s)	55
AvaI	CYCGRG	1 cut(s)	978
AvaII	GGWCC	4 cut(s)	982, 1123, 1185, 1952
BaeGI	GKGCMC	2 cut(s)	317, 1757
BanII	GRGCYC	2 cut(s)	348, 823
BbsI	GAAGAC	2 cut(s)	553, 2001
Bbv12I	GWGCWC	7 cut(s)	317, 348, 1092, 1105, 1263, 1444, 2172
BbvCI	CCTCAGC	1 cut(s)	1398
BccI	CCATC	6 cut(s)	136, 137, 142, 481, 1271, 1978
BceAI	ACGGC	2 cut(s)	697, 1731
BciT130I	CCWGG	4 cut(s)	326, 568, 705, 2025
BclI	TGATCA	1 cut(s)	91
BcnI	CCSGG	2 cut(s)	719, 1199
BcoDI	GTCTC	3 cut(s)	120, 476, 1045
BcuI	ACTAGT	2 cut(s)	43, 49
BfaI	CTAG	6 cut(s)	44, 50, 56, 308, 932, 1325
BfmI	CTRYAG	1 cut(s)	1581
BfoI	RGCGCY	2 cut(s)	781, 1332
BfuAI	ACCTGC	3 cut(s)	652, 1402, 1979
BmcAI	AGTACT	2 cut(s)	48, 689
Bme1390I	CCNGG	6 cut(s)	326, 568, 705, 719, 1199, 2025
Bme18I	GGWCC	4 cut(s)	982, 1123, 1185, 1952
BmeT110I	CYCGRG	1 cut(s)	978
BmgBI	CACGTC	2 cut(s)	651, 1477
BmgT120I	GGNCC	7 cut(s)	747, 982, 1123, 1185, 1196, 1520, 1952
BmiI	GGNNCC	2 cut(s)	983, 1186
BmrFI	CCNGG	6 cut(s)	326, 568, 705, 719, 1199, 2025
BmtI	GCTAGC	1 cut(s)	59
BpiI	GAAGAC	2 cut(s)	553, 2001
BpmI	CTGGAG	1 cut(s)	1434
Bpu10I	CCTNAGC	2 cut(s)	342, 1398
BpuEI	CTTGAG	1 cut(s)	1639
BpuMI	CCSGG	2 cut(s)	719, 1199
Bsa29I	ATCGAT	1 cut(s)	2018
BsaAI	YACGTR	1 cut(s)	770
BsaBI	GATNNNNATC	2 cut(s)	903, 2039
BsaHI	GRCGYC	2 cut(s)	1227, 2112
BsaI	GGTCTC	2 cut(s)	120, 1045
BsaJI	CCNNGG	4 cut(s)	325, 970, 1512, 2145
BsaWI	WCCGGW	3 cut(s)	163, 591, 1187
Bsc4I	CCNNNNNNNGG	4 cut(s)	756, 1076, 1182, 1518
Bse1I	ACTGG	5 cut(s)	406, 646, 1037, 1098, 1168
Bse3DI	GCAATG	2 cut(s)	887, 1637
Bse8I	GATNNNNATC	2 cut(s)	903, 2039
BseBI	CCWGG	4 cut(s)	326, 568, 705, 2025
BseCI	ATCGAT	1 cut(s)	2018
BseDI	CCNNGG	4 cut(s)	325, 970, 1512, 2145
BseGI	GGATG	9 cut(s)	230, 371, 537, 663, 700, 966, 1476, 1508, 1718
BseJI	GATNNNNATC	2 cut(s)	903, 2039
BseLI	CCNNNNNNNGG	4 cut(s)	756, 1076, 1182, 1518
BseMI	GCAATG	2 cut(s)	887, 1637
BseMII	CTCAG	5 cut(s)	333, 1389, 1413, 1947, 2142
BseNI	ACTGG	5 cut(s)	406, 646, 1037, 1098, 1168
BseRI	GAGGAG	4 cut(s)	538, 1415, 1722, 1777
BseSI	GKGCMC	2 cut(s)	317, 1757
BseYI	CCCAGC	2 cut(s)	506, 876
BshFI	GGCC	5 cut(s)	717, 749, 1175, 1197, 1522
BshVI	ATCGAT	1 cut(s)	2018
BsiHKAI	GWGCWC	7 cut(s)	317, 348, 1092, 1105, 1263, 1444, 2172
BsiHKCI	CYCGRG	1 cut(s)	978
BsiSI	CCGG	5 cut(s)	164, 592, 718, 1188, 1199
BslFI	GGGAC	2 cut(s)	995, 1726
BslI	CCNNNNNNNGG	4 cut(s)	756, 1076, 1182, 1518
BsmAI	GTCTC	3 cut(s)	120, 476, 1045
BsmBI	CGTCTC	1 cut(s)	476
BsmFI	GGGAC	2 cut(s)	995, 1726
BsnI	GGCC	5 cut(s)	717, 749, 1175, 1197, 1522
Bso31I	GGTCTC	2 cut(s)	120, 1045
BsoBI	CYCGRG	1 cut(s)	978
Bsp1286I	GDGCHC	9 cut(s)	317, 348, 823, 1092, 1105, 1263, 1444, 1757, 2172
Bsp1407I	TGTACA	1 cut(s)	356
Bsp143I	GATC	4 cut(s)	91, 644, 1666, 2034
Bsp19I	CCATGG	2 cut(s)	970, 1512
BspACI	CCGC	7 cut(s)	473, 517, 696, 733, 1454, 2081, 2181
BspANI	GGCC	5 cut(s)	717, 749, 1175, 1197, 1522
BspCNI	CTCAG	5 cut(s)	334, 1390, 1414, 1948, 2143
BspDI	ATCGAT	1 cut(s)	2018
BspHI	TCATGA	4 cut(s)	895, 1300, 1794, 2031
BspLI	GGNNCC	2 cut(s)	983, 1186
BspMAI	CTGCAG	1 cut(s)	1585
BspMI	ACCTGC	3 cut(s)	652, 1402, 1979
BspOI	GCTAGC	1 cut(s)	59
BspPI	GGATC	2 cut(s)	652, 1661
BspQI	GCTCTTC	2 cut(s)	1110, 1215
BspTNI	GGTCTC	2 cut(s)	120, 1045
BsrBI	CCGCTC	1 cut(s)	517
BsrDI	GCAATG	2 cut(s)	887, 1637
BsrGI	TGTACA	1 cut(s)	356
BsrI	ACTGG	5 cut(s)	406, 646, 1037, 1098, 1168
BssECI	CCNNGG	4 cut(s)	325, 970, 1512, 2145
BssMI	GATC	4 cut(s)	91, 644, 1666, 2034
BssNI	GRCGYC	2 cut(s)	1227, 2112
BssT1I	CCWWGG	3 cut(s)	970, 1512, 2145
Bst2UI	CCWGG	4 cut(s)	326, 568, 705, 2025
Bst4CI	ACNGT	3 cut(s)	20, 1292, 1375
Bst6I	CTCTTC	5 cut(s)	831, 993, 1110, 1215, 1866
BstACI	GRCGYC	2 cut(s)	1227, 2112
BstAPI	GCANNNNNTGC	1 cut(s)	71
BstAUI	TGTACA	1 cut(s)	356
BstBAI	YACGTR	1 cut(s)	770
BstC8I	GCNNGC	8 cut(s)	7, 57, 305, 504, 698, 887, 1578, 1827
BstDEI	CTNAG	8 cut(s)	210, 342, 866, 1343, 1398, 1422, 1956, 2151
BstDSI	CCRYGG	2 cut(s)	970, 1512
BstF5I	GGATG	9 cut(s)	230, 371, 537, 663, 700, 966, 1476, 1508, 1718
BstH2I	RGCGCY	2 cut(s)	781, 1332
BstHHI	GCGC	3 cut(s)	11, 780, 1331
BstKTI	GATC	4 cut(s)	94, 647, 1669, 2037
BstMAI	GTCTC	3 cut(s)	120, 476, 1045
BstMBI	GATC	4 cut(s)	91, 644, 1666, 2034
BstMWI	GCNNNNNNNGC	9 cut(s)	65, 71, 786, 886, 1214, 1418, 1514, 1625, 1634
BstNI	CCWGG	4 cut(s)	326, 568, 705, 2025
BstNSI	RCATGY	5 cut(s)	9, 303, 307, 1580, 1925
BstSCI	CCNGG	6 cut(s)	324, 566, 703, 717, 1197, 2023
BstSFI	CTRYAG	1 cut(s)	1581
BstSLI	GKGCMC	2 cut(s)	317, 1757
BstV2I	GAAGAC	2 cut(s)	553, 2001
Bsu15I	ATCGAT	1 cut(s)	2018
BsuRI	GGCC	5 cut(s)	717, 749, 1175, 1197, 1522
BsuTUI	ATCGAT	1 cut(s)	2018
BtgI	CCRYGG	2 cut(s)	970, 1512
BtgZI	GCGATG	1 cut(s)	114
BtrI	CACGTC	2 cut(s)	651, 1477
BtsCI	GGATG	9 cut(s)	230, 371, 537, 663, 700, 966, 1476, 1508, 1718
BtsI	GCAGTG	1 cut(s)	561
BtsIMutI	CAGTG	2 cut(s)	561, 1105
BveI	ACCTGC	3 cut(s)	652, 1402, 1979
Cac8I	GCNNGC	8 cut(s)	7, 57, 305, 504, 698, 887, 1578, 1827
CciI	TCATGA	4 cut(s)	895, 1300, 1794, 2031
CfoI	GCGC	3 cut(s)	11, 780, 1331
Cfr13I	GGNCC	7 cut(s)	747, 982, 1123, 1185, 1196, 1520, 1952
ClaI	ATCGAT	1 cut(s)	2018
CseI	GACGC	1 cut(s)	1235
Csp6I	GTAC	8 cut(s)	47, 297, 357, 688, 767, 1147, 1371, 1786
CviQI	GTAC	8 cut(s)	47, 297, 357, 688, 767, 1147, 1371, 1786
DdeI	CTNAG	8 cut(s)	210, 342, 866, 1343, 1398, 1422, 1956, 2151
DpnI	GATC	4 cut(s)	93, 646, 1668, 2036
DpnII	GATC	4 cut(s)	91, 644, 1666, 2034
EaeI	YGGCCR	2 cut(s)	715, 1173
Eam1104I	CTCTTC	5 cut(s)	831, 993, 1110, 1215, 1866
EarI	CTCTTC	5 cut(s)	831, 993, 1110, 1215, 1866
Ecl136II	GAGCTC	1 cut(s)	346
Eco130I	CCWWGG	3 cut(s)	970, 1512, 2145
Eco24I	GRGCYC	2 cut(s)	348, 823
Eco31I	GGTCTC	2 cut(s)	120, 1045
Eco47I	GGWCC	4 cut(s)	982, 1123, 1185, 1952
Eco47III	AGCGCT	1 cut(s)	779
Eco53kI	GAGCTC	1 cut(s)	346
Eco57I	CTGAAG	2 cut(s)	766, 1349
Eco88I	CYCGRG	1 cut(s)	978
EcoICRI	GAGCTC	1 cut(s)	346
EcoRI	GAATTC	1 cut(s)	1915
EcoRII	CCWGG	4 cut(s)	324, 566, 703, 2023
EcoT14I	CCWWGG	3 cut(s)	970, 1512, 2145
EcoT22I	ATGCAT	1 cut(s)	305
EcoT38I	GRGCYC	2 cut(s)	348, 823
ErhI	CCWWGG	3 cut(s)	970, 1512, 2145
Esp3I	CGTCTC	1 cut(s)	476
FalI	AAGNNNNNCTT	4 cut(s)	242, 274, 1347, 1379
FaqI	GGGAC	2 cut(s)	995, 1726
FauI	CCCGC	1 cut(s)	689
FbaI	TGATCA	1 cut(s)	91
FokI	GGATG	9 cut(s)	217, 378, 544, 670, 687, 953, 1483, 1495, 1705
FriOI	GRGCYC	2 cut(s)	348, 823
FspBI	CTAG	6 cut(s)	44, 50, 56, 308, 932, 1325
FspI	TGCGCA	1 cut(s)	10
GlaI	GCGC	3 cut(s)	10, 779, 1330
GsaI	CCCAGC	2 cut(s)	510, 880
GsuI	CTGGAG	1 cut(s)	1434
HaeII	RGCGCY	2 cut(s)	781, 1332
HaeIII	GGCC	5 cut(s)	717, 749, 1175, 1197, 1522
HapII	CCGG	5 cut(s)	164, 592, 718, 1188, 1199
HgaI	GACGC	1 cut(s)	1235
HhaI	GCGC	3 cut(s)	11, 780, 1331
Hin1I	GRCGYC	2 cut(s)	1227, 2112
Hin6I	GCGC	3 cut(s)	9, 778, 1329
HinP1I	GCGC	3 cut(s)	9, 778, 1329
HincII	GTYRAC	4 cut(s)	679, 815, 1349, 1858
HindII	GTYRAC	4 cut(s)	679, 815, 1349, 1858
HindIII	AAGCTT	1 cut(s)	1909
HinfI	GANTC	9 cut(s)	109, 892, 904, 1003, 1080, 1765, 2015, 2020, 2028
HpaII	CCGG	5 cut(s)	164, 592, 718, 1188, 1199
HphI	GGTGA	7 cut(s)	98, 234, 503, 1460, 1577, 2003, 2070
Hpy166II	GTNNAC	8 cut(s)	315, 359, 679, 767, 815, 1349, 1858, 2074
Hpy188I	TCNGA	7 cut(s)	108, 142, 409, 538, 785, 1079, 2045
Hpy8I	GTNNAC	8 cut(s)	315, 359, 679, 767, 815, 1349, 1858, 2074
Hpy99I	CGWCG	3 cut(s)	652, 1481, 2126
HpyCH4III	ACNGT	3 cut(s)	20, 1292, 1375
HpyCH4IV	ACGT	5 cut(s)	650, 769, 1476, 1854, 2112
HpyF10VI	GCNNNNNNNGC	9 cut(s)	65, 71, 786, 886, 1214, 1418, 1514, 1625, 1634
HpyF3I	CTNAG	8 cut(s)	210, 342, 866, 1343, 1398, 1422, 1956, 2151
HpySE526I	ACGT	5 cut(s)	650, 769, 1476, 1854, 2112
Hsp92I	GRCGYC	2 cut(s)	1227, 2112
HspAI	GCGC	3 cut(s)	9, 778, 1329
Ksp22I	TGATCA	1 cut(s)	91
Kzo9I	GATC	4 cut(s)	91, 644, 1666, 2034
LguI	GCTCTTC	2 cut(s)	1110, 1215
LmnI	GCTCC	5 cut(s)	281, 590, 1258, 1415, 1591
MaeI	CTAG	6 cut(s)	44, 50, 56, 308, 932, 1325
MaeII	ACGT	5 cut(s)	650, 769, 1476, 1854, 2112
MaeIII	GTNAC	1 cut(s)	1693
MalI	GATC	4 cut(s)	93, 646, 1668, 2036
MbiI	CCGCTC	1 cut(s)	517
MboI	GATC	4 cut(s)	91, 644, 1666, 2034
MboII	GAAGA	9 cut(s)	472, 553, 616, 818, 1010, 1097, 1202, 1883, 2006
MfeI	CAATTG	1 cut(s)	1152
MhlI	GDGCHC	9 cut(s)	317, 348, 823, 1092, 1105, 1263, 1444, 1757, 2172
MlyI	GAGTC	1 cut(s)	1774
MmeI	TCCRAC	2 cut(s)	516, 1915
Mph1103I	ATGCAT	1 cut(s)	305
MroXI	GAANNNNTTC	3 cut(s)	1002, 1875, 2019
MseI	TTAA	1 cut(s)	398
MslI	CAYNNNNRTG	5 cut(s)	35, 276, 364, 1293, 1316
MspA1I	CMGCKG	3 cut(s)	1421, 1832, 2183
MspI	CCGG	5 cut(s)	164, 592, 718, 1188, 1199
MspR9I	CCNGG	6 cut(s)	326, 568, 705, 719, 1199, 2025
MunI	CAATTG	1 cut(s)	1152
MvaI	CCWGG	4 cut(s)	326, 568, 705, 2025
MwoI	GCNNNNNNNGC	9 cut(s)	65, 71, 786, 886, 1214, 1418, 1514, 1625, 1634
NciI	CCSGG	2 cut(s)	719, 1199
NcoI	CCATGG	2 cut(s)	970, 1512
NdeII	GATC	4 cut(s)	91, 644, 1666, 2034
NheI	GCTAGC	1 cut(s)	55
NlaIV	GGNNCC	2 cut(s)	983, 1186
NmuCI	GTSAC	1 cut(s)	1693
NsbI	TGCGCA	1 cut(s)	10
NsiI	ATGCAT	1 cut(s)	305
NspI	RCATGY	5 cut(s)	9, 303, 307, 1580, 1925
OliI	CACNNNNGTG	1 cut(s)	1293
PaeI	GCATGC	3 cut(s)	9, 307, 1580
PagI	TCATGA	4 cut(s)	895, 1300, 1794, 2031
PaqCI	CACCTGC	2 cut(s)	652, 1979
PciI	ACATGT	1 cut(s)	1921
PciSI	GCTCTTC	2 cut(s)	1110, 1215
PcsI	WCGNNNNNNNCGW	2 cut(s)	510, 2118
PdmI	GAANNNNTTC	3 cut(s)	1002, 1875, 2019
PfeI	GAWTC	8 cut(s)	109, 892, 904, 1003, 1080, 2015, 2020, 2028
PfoI	TCCNGGA	2 cut(s)	703, 2023
PleI	GAGTC	1 cut(s)	1773
PpsI	GAGTC	1 cut(s)	1773
Ppu21I	YACGTR	1 cut(s)	770
PscI	ACATGT	1 cut(s)	1921
PsiI	TTATAA	1 cut(s)	375
Psp124BI	GAGCTC	1 cut(s)	348
Psp6I	CCWGG	4 cut(s)	324, 566, 703, 2023
PspFI	CCCAGC	2 cut(s)	506, 876
PspGI	CCWGG	4 cut(s)	324, 566, 703, 2023
PspN4I	GGNNCC	2 cut(s)	983, 1186
PspPI	GGNCC	7 cut(s)	747, 982, 1123, 1185, 1196, 1520, 1952
PstI	CTGCAG	1 cut(s)	1585
PvuII	CAGCTG	2 cut(s)	1421, 1832
RsaI	GTAC	8 cut(s)	48, 298, 358, 689, 768, 1148, 1372, 1787
RsaNI	GTAC	8 cut(s)	47, 297, 357, 688, 767, 1147, 1371, 1786
RseI	CAYNNNNRTG	5 cut(s)	35, 276, 364, 1293, 1316
SacI	GAGCTC	1 cut(s)	348
SapI	GCTCTTC	2 cut(s)	1110, 1215
SaqAI	TTAA	1 cut(s)	398
Sau3AI	GATC	4 cut(s)	91, 644, 1666, 2034
Sau96I	GGNCC	7 cut(s)	747, 982, 1123, 1185, 1196, 1520, 1952
ScaI	AGTACT	2 cut(s)	48, 689
SchI	GAGTC	1 cut(s)	1774
ScrFI	CCNGG	6 cut(s)	326, 568, 705, 719, 1199, 2025
SduI	GDGCHC	9 cut(s)	317, 348, 823, 1092, 1105, 1263, 1444, 1757, 2172
SfcI	CTRYAG	1 cut(s)	1581
SinI	GGWCC	4 cut(s)	982, 1123, 1185, 1952
SmiMI	CAYNNNNRTG	5 cut(s)	35, 276, 364, 1293, 1316
SmlI	CTYRAG	1 cut(s)	1654
SmoI	CTYRAG	1 cut(s)	1654
SpeI	ACTAGT	2 cut(s)	43, 49
SphI	GCATGC	3 cut(s)	9, 307, 1580
SsiI	CCGC	7 cut(s)	473, 517, 696, 733, 1454, 2081, 2181
SspI	AATATT	1 cut(s)	1464
SspMI	CTAG	6 cut(s)	44, 50, 56, 308, 932, 1325
SstI	GAGCTC	1 cut(s)	348
StyD4I	CCNGG	6 cut(s)	324, 566, 703, 717, 1197, 2023
StyI	CCWWGG	3 cut(s)	970, 1512, 2145
TaaI	ACNGT	3 cut(s)	20, 1292, 1375
TaiI	ACGT	5 cut(s)	653, 772, 1479, 1857, 2115
TaqI	TCGA	6 cut(s)	513, 647, 914, 1479, 1705, 2018
TaqII	GACCGA	1 cut(s)	102
TatI	WGTACW	3 cut(s)	46, 356, 687
TauI	GCSGC	2 cut(s)	476, 736
TfiI	GAWTC	8 cut(s)	109, 892, 904, 1003, 1080, 2015, 2020, 2028
Tru1I	TTAA	1 cut(s)	398
Tru9I	TTAA	1 cut(s)	398
TscAI	CASTG	2 cut(s)	561, 1105
TseFI	GTSAC	1 cut(s)	1693
Tsp45I	GTSAC	1 cut(s)	1693
TspDTI	ATGAA	8 cut(s)	96, 260, 335, 713, 884, 917, 1077, 1877
TspGWI	ACGGA	3 cut(s)	1008, 1366, 1790
TspRI	CASTG	2 cut(s)	561, 1105
VneI	GTGCAC	1 cut(s)	313
VpaK11BI	GGWCC	4 cut(s)	982, 1123, 1185, 1952
XapI	RAATTY	3 cut(s)	267, 1745, 1915
XceI	RCATGY	5 cut(s)	9, 303, 307, 1580, 1925
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1981
XmnI	GAANNNNTTC	3 cut(s)	1002, 1875, 2019
XspI	CTAG	6 cut(s)	44, 50, 56, 308, 932, 1325
ZraI	GACGTC	1 cut(s)	2113
ZrmI	AGTACT	2 cut(s)	48, 689
Zsp2I	ATGCAT	1 cut(s)	305

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.