Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000898.1

Orthogroup ID

OG0005754

Physical Location & Seq

Genomic Coordinates Forward (+)

171857 .. 179621

Gene Structure 7765 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2391 bp

atgacaaaagcggaacacgtgtcggatgaccctcccacctcatgtgacccccacgcacgtgtgatccacgcaccaatcccctctcgagtcttcccccaaagaaatcatccaactagcctatacttgccaatcacgcaattgtggtacaagcaagacactagaaacgaagagtcccctaccccatcgatcagcccaaggttgagcccaaacctagagactgaggcccaaatccaaaccaatagaggaggagcaccactgctcactgcttctttgtcgccatcgctgtcctgtcctccaacggcacaccgttcgaatagctccagtgaccagctgttccaaccgaaaaactcagaggtccaattcgagattcctgcaacactggccacgaatgctcaaagaccaaattggcctactcaacccgagactcacgctaaagtagcaggcagagtcttcggccctcctaaaaagaagaagggccgaccttcgcttctcgatctccagaagcgcttcctgcagcagcagcaaaacccccatttcctcaaccctagcgccgccgccgccgcccgccccgccactcgccgcagcaccaaccctaacgctcctcctccgccggacgatgaagacgacgacgacgacgagcgcgccaagaagaagcacaagctcctcctcggaatcaaccaccaacaccacaatcgcaaaccgacattgtcgccgttcaattccggcccctacggctccgtttccaatgccgacgacgacgatccggacaagatcggatccaatcatacgagccaaagcgtgttgaaagcgactgacagtagcagtattcatgggacgcaggtggagtttggtcccactacgcctttgccagacaaaaagttgttggtgttcatccttgataggcttcaaaaaaaggacactcgtggagtgttttcggagcctgtggatccagaagagctgcctgattatcatgaaatcattgaaaacccgatggattttggaactgtcagggagaaactggatcagggagcctatgccagcttggaacagtttgagaaagatgtcttcttgatatcttcaaatgcaatgcagtataatgcaccagacacgatttatttccgacaggcacggtctatccaagaacttgcgaaaaaggactttgaaaatttgaggcaagacaacaccggggatggtggtgagcccaaaccaaaagttgccaggagaggcaggccacctggcagcaagaccatgaaaaagtcgattgacttggctccagttgaacgtcttggtcctcaatatttctcagaaacgactcttccccctggaggagagacttcgagcttgtccaatagttacaatttgagaaaaggacccgcttcatacaagtttaggactgctgatgcattaaatagaggtccacatggatctcttggtggtgatactaatgccaactggttgtctgaattggagaatgaatttcctgcttcagtattgaggagtgtgctaaggtacggaaagaaacagtttccagtagacgagaacagacgtgaaacctataggcagtctctggcttcagaacatgaaccatctgaacttactggtcttgaaggggagtggaaccaacttatggcggtaggtgtcgctgcggaggagcatggttatgcaagaagtatggctcgatttgctgcaaatcttggacctgttgcttggaagattgcttctaagcggataggaagtgttttgcctattggagttgagtttggtcctggatgggtaggagaaaatgagtcatcaaggttgcagcagttttcattccgtcagggagaggataaggttcaatgcaaccctgcatctgatgaccataaagacagacttcgatgtcaaagtacatcaggcctaaattctgttgcagatagatatttgctgcaaaacggtgttaacatggaaaactgtagagaattcaattcccaaaatgggttggcatcacttaacagtggtgttagtgggatacgacctgtgcctcctttccagaattccatgattcactctgggatgtcaagttcgaccaacacttcagtaccttctcatcatcaaatggtcggcatgttttcagaaaggaacatgaacacacagttgatgcctataggcgatattgattcaaatgaagccagatcagaaatttccagtagatcaaggaatcccttagcccaagcacaacctcaattggcgtatggtggggaaacttcttggcagggtttatcgatgaacaataaacaggtttcttattcattacccccggacctgaatgttgaattcggtgcaccaggctctcccagttctcttattcaaattggcatgccacagcagccagatttagctttgcaactttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000123 GO:0002576 GO:0005575 GO:0005576 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006810 GO:0006887 GO:0006996 GO:0008150 GO:0008152 GO:0009987 GO:0016043 GO:0016192 GO:0016569 GO:0016570 GO:0016573 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0031248 GO:0031974 GO:0031981 GO:0032940 GO:0032991 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043543 GO:0043966 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0045055 GO:0046903 GO:0051179 GO:0051234 GO:0051276 GO:0070013 GO:0070775 GO:0070776 GO:0071704 GO:0071840 GO:1901564 GO:1902493 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain

Protein Analysis

796

Amino Acids

87.73

Weight (kDa)

6.42

Isoelectric Point (pI)

50.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Bromodomain	PF00439	298 - 377	8.3e-23	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005754)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G20670 AT1G76380 AT1G76380 AT1G76380
fragaria_vesca	FvH4_5g24560 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400 FvH4_5g25400
malus_domestica	MD06G1010000.v1.1 MD16G1284400.v1.1
prunus_persica	Prupe.5G010200_v2.0.a1
pyrus_communis	pycom06g00820 pycom16g25950
rosa_chinensis	RchiOBHm_Chr7g0215631
rosa_laevigata	RLG00000002637
rosa_multiflora	Rmu_sc0000898.1_g000040 Rmu_sc0007602.1_g000008
rosa_roxburghii	Rroxscaffold_3G00243980
rosa_rugosa	Rorug07G0155700 Rorug07G0155700
rosa_samantha	Rh7AG292100 Rh7BG284700 Rh7CG312100 Rh7DG295500
rosa_wichuraiana	Rw7G024880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	829
AasI	GACNNNNNNGTC	1 cut(s)	1878
Acc36I	ACCTGC	1 cut(s)	829
AccB7I	CCANNNNNTGG	1 cut(s)	1627
AccI	GTMKAC	1 cut(s)	1533
AccII	CGCG	1 cut(s)	642
AccIII	TCCGGA	1 cut(s)	763
AclWI	GGATC	8 cut(s)	58, 755, 771, 784, 941, 954, 1029, 1432
AcoI	YGGCCR	1 cut(s)	381
AcsI	RAATTY	7 cut(s)	1165, 1475, 1900, 1958, 2032, 2178, 2312
AcuI	CTGAAG	3 cut(s)	1470, 1557, 2058
AcvI	CACGTG	2 cut(s)	19, 59
AfaI	GTAC	4 cut(s)	146, 1511, 1888, 2079
AfeI	AGCGCT	1 cut(s)	506
AfiI	CCNNNNNNNGG	3 cut(s)	1325, 1627, 1974
AflIII	ACRYGT	3 cut(s)	16, 18, 58
AjiI	CACGTC	1 cut(s)	1547
AjnI	CCWGG	5 cut(s)	1217, 1234, 1321, 1765, 2323
AjuI	GAANNNNNNNTTGG	2 cut(s)	351, 383
AleI	CACNNNNGTG	1 cut(s)	57
AloI	GAACNNNNNNTCC	2 cut(s)	2044, 2076
AluBI	AGCT	7 cut(s)	318, 331, 661, 958, 1041, 1341, 2378
AluI	AGCT	7 cut(s)	318, 331, 661, 958, 1041, 1341, 2378
Alw21I	GWGCWC	2 cut(s)	253, 2323
Alw26I	GTCTC	4 cut(s)	209, 416, 1325, 1569
Alw44I	GTGCAC	1 cut(s)	2319
AlwI	GGATC	8 cut(s)	58, 755, 771, 784, 941, 954, 1029, 1432
AlwNI	CAGNNNCTG	1 cut(s)	1567
Ama87I	CYCGRG	2 cut(s)	84, 419
Aor13HI	TCCGGA	1 cut(s)	763
Aor51HI	AGCGCT	1 cut(s)	506
AoxI	GGCC	8 cut(s)	222, 381, 407, 454, 475, 724, 1229, 1894
ApaLI	GTGCAC	1 cut(s)	2319
ApoI	RAATTY	7 cut(s)	1165, 1475, 1900, 1958, 2032, 2178, 2312
Asp700I	GAANNNNTTC	1 cut(s)	506
AspLEI	GCGC	4 cut(s)	507, 551, 642, 644
AsuC2I	CCSGG	2 cut(s)	1186, 2297
AsuHPI	GGTGA	2 cut(s)	1208, 1448
AsuII	TTCGAA	1 cut(s)	311
AvaI	CYCGRG	2 cut(s)	84, 419
AvaII	GGWCC	8 cut(s)	355, 851, 1289, 1370, 1415, 1697, 1763, 2299
BaeGI	GKGCMC	1 cut(s)	2323
BaeI	ACNNNNGTAYC	2 cut(s)	2061, 2094
BalI	TGGCCA	1 cut(s)	383
BamHI	GGATCC	2 cut(s)	776, 946
BanII	GRGCYC	2 cut(s)	206, 1203
BauI	CACGAG	1 cut(s)	921
BbrPI	CACGTG	2 cut(s)	19, 59
BbsI	GAAGAC	4 cut(s)	82, 442, 627, 1057
Bbv12I	GWGCWC	2 cut(s)	253, 2323
BccI	CCATC	6 cut(s)	190, 286, 985, 1184, 1594, 1764
BceAI	ACGGC	3 cut(s)	315, 697, 748
BcgI	CGANNNNNNTGC	6 cut(s)	291, 325, 353, 387, 433, 467
BciT130I	CCWGG	5 cut(s)	1219, 1236, 1323, 1767, 2325
BciVI	GTATCC	1 cut(s)	2001
BcnI	CCSGG	2 cut(s)	1186, 2297
BcoDI	GTCTC	4 cut(s)	209, 416, 1325, 1569
BfaI	CTAG	4 cut(s)	114, 159, 212, 546
BfmI	CTRYAG	4 cut(s)	512, 1555, 1951, 2142
BfoI	RGCGCY	2 cut(s)	508, 552
BfuAI	ACCTGC	1 cut(s)	829
BfuI	GTATCC	1 cut(s)	2001
BglI	GCCNNNNNGGC	1 cut(s)	732
Bme1390I	CCNGG	7 cut(s)	1186, 1219, 1236, 1323, 1767, 2297, 2325
Bme18I	GGWCC	8 cut(s)	355, 851, 1289, 1370, 1415, 1697, 1763, 2299
BmeT110I	CYCGRG	2 cut(s)	84, 419
BmgBI	CACGTC	1 cut(s)	1547
BmrFI	CCNGG	7 cut(s)	1186, 1219, 1236, 1323, 1767, 2297, 2325
BmrI	ACTGGG	1 cut(s)	2328
BmsI	GCATC	4 cut(s)	1390, 1859, 1991, 2127
BmuI	ACTGGG	1 cut(s)	2328
BpiI	GAAGAC	4 cut(s)	82, 442, 627, 1057
BpmI	CTGGAG	4 cut(s)	304, 482, 1257, 1344
Bpu10I	CCTNAGC	2 cut(s)	1505, 2203
Bpu14I	TTCGAA	1 cut(s)	311
BpuMI	CCSGG	2 cut(s)	1186, 2297
Bsa29I	ATCGAT	2 cut(s)	185, 2261
BsaAI	YACGTR	2 cut(s)	19, 59
BsaJI	CCNNGG	5 cut(s)	194, 667, 1185, 1321, 2295
BsaWI	WCCGGW	1 cut(s)	763
Bsc4I	CCNNNNNNNGG	3 cut(s)	1325, 1627, 1974
Bse1I	ACTGG	9 cut(s)	321, 384, 1023, 1274, 1457, 1529, 1603, 2184, 2334
Bse3DI	GCAATG	1 cut(s)	1092
BseAI	TCCGGA	1 cut(s)	763
BseBI	CCWGG	5 cut(s)	1219, 1236, 1323, 1767, 2325
BseCI	ATCGAT	2 cut(s)	185, 2261
BseDI	CCNNGG	5 cut(s)	194, 667, 1185, 1321, 2295
BseGI	GGATG	6 cut(s)	31, 106, 891, 1195, 1775, 2058
BseLI	CCNNNNNNNGG	3 cut(s)	1325, 1627, 1974
BseMI	GCAATG	1 cut(s)	1092
BseMII	CTCAG	3 cut(s)	210, 363, 1317
BseNI	ACTGG	9 cut(s)	321, 384, 1023, 1274, 1457, 1529, 1603, 2184, 2334
BsePI	GCGCGC	1 cut(s)	640
BseRI	GAGGAG	9 cut(s)	258, 261, 591, 594, 653, 656, 1341, 1510, 1664
BseSI	GKGCMC	1 cut(s)	2323
Bsh1236I	CGCG	1 cut(s)	642
BshFI	GGCC	8 cut(s)	224, 383, 409, 456, 477, 726, 1231, 1896
BshVI	ATCGAT	2 cut(s)	185, 2261
BsiHKAI	GWGCWC	2 cut(s)	253, 2323
BsiHKCI	CYCGRG	2 cut(s)	84, 419
BsiSI	CCGG	5 cut(s)	611, 723, 764, 1185, 2297
BslFI	GGGAC	3 cut(s)	157, 837, 847
BslI	CCNNNNNNNGG	3 cut(s)	1325, 1627, 1974
BsmAI	GTCTC	4 cut(s)	209, 416, 1325, 1569
BsmFI	GGGAC	3 cut(s)	157, 837, 847
BsmI	GAATGC	1 cut(s)	394
BsnI	GGCC	8 cut(s)	224, 383, 409, 456, 477, 726, 1231, 1896
BsoBI	CYCGRG	2 cut(s)	84, 419
Bsp119I	TTCGAA	1 cut(s)	311
Bsp1286I	GDGCHC	4 cut(s)	206, 253, 1203, 2323
Bsp13I	TCCGGA	1 cut(s)	763
BspANI	GGCC	8 cut(s)	224, 383, 409, 456, 477, 726, 1231, 1896
BspCNI	CTCAG	3 cut(s)	211, 362, 1316
BspDI	ATCGAT	2 cut(s)	185, 2261
BspEI	TCCGGA	1 cut(s)	763
BspFNI	CGCG	1 cut(s)	642
BspHI	TCATGA	1 cut(s)	970
BspMAI	CTGCAG	1 cut(s)	516
BspMI	ACCTGC	1 cut(s)	829
BspPI	GGATC	8 cut(s)	58, 755, 771, 784, 941, 954, 1029, 1432
BspQI	GCTCTTC	1 cut(s)	948
BspT104I	TTCGAA	1 cut(s)	311
BsrDI	GCAATG	1 cut(s)	1092
BsrI	ACTGG	9 cut(s)	321, 384, 1023, 1274, 1457, 1529, 1603, 2184, 2334
BssECI	CCNNGG	5 cut(s)	194, 667, 1185, 1321, 2295
BssHII	GCGCGC	1 cut(s)	640
BssSI	CACGAG	1 cut(s)	921
BssT1I	CCWWGG	1 cut(s)	194
Bst2BI	CACGAG	1 cut(s)	921
Bst2UI	CCWGG	5 cut(s)	1219, 1236, 1323, 1767, 2325
Bst6I	CTCTTC	3 cut(s)	162, 948, 1320
BstBAI	YACGTR	2 cut(s)	19, 59
BstBI	TTCGAA	1 cut(s)	311
BstC8I	GCNNGC	6 cut(s)	442, 565, 642, 1039, 1229, 2357
BstDEI	CTNAG	6 cut(s)	219, 349, 1303, 1505, 1722, 2203
BstF5I	GGATG	6 cut(s)	31, 106, 891, 1195, 1775, 2058
BstFNI	CGCG	1 cut(s)	642
BstH2I	RGCGCY	2 cut(s)	508, 552
BstHHI	GCGC	4 cut(s)	507, 551, 642, 644
BstMAI	GTCTC	4 cut(s)	209, 416, 1325, 1569
BstNI	CCWGG	5 cut(s)	1219, 1236, 1323, 1767, 2325
BstNSI	RCATGY	2 cut(s)	2107, 2359
BstSCI	CCNGG	7 cut(s)	1184, 1217, 1234, 1321, 1765, 2295, 2323
BstSFI	CTRYAG	4 cut(s)	512, 1555, 1951, 2142
BstSLI	GKGCMC	1 cut(s)	2323
BstUI	CGCG	1 cut(s)	642
BstV2I	GAAGAC	4 cut(s)	82, 442, 627, 1057
BstX2I	RGATCY	3 cut(s)	776, 946, 1424
BstYI	RGATCY	3 cut(s)	776, 946, 1424
Bsu15I	ATCGAT	2 cut(s)	185, 2261
BsuI	GTATCC	1 cut(s)	2001
BsuRI	GGCC	8 cut(s)	224, 383, 409, 456, 477, 726, 1231, 1896
BsuTUI	ATCGAT	2 cut(s)	185, 2261
BtgZI	GCGATG	1 cut(s)	264
BtrI	CACGTC	1 cut(s)	1547
BtsCI	GGATG	6 cut(s)	31, 106, 891, 1195, 1775, 2058
BtsI	GCAGTG	2 cut(s)	254, 261
BtsIMutI	CAGTG	5 cut(s)	254, 261, 328, 377, 1999
BveI	ACCTGC	1 cut(s)	829
Cac8I	GCNNGC	6 cut(s)	442, 565, 642, 1039, 1229, 2357
CaiI	CAGNNNCTG	1 cut(s)	1567
CciI	TCATGA	1 cut(s)	970
CfoI	GCGC	4 cut(s)	507, 551, 642, 644
ClaI	ATCGAT	2 cut(s)	185, 2261
CseI	GACGC	1 cut(s)	844
Csp6I	GTAC	4 cut(s)	145, 1510, 1887, 2078
CviQI	GTAC	4 cut(s)	145, 1510, 1887, 2078
DdeI	CTNAG	6 cut(s)	219, 349, 1303, 1505, 1722, 2203
DrdI	GACNNNNNNGTC	1 cut(s)	1878
DseDI	GACNNNNNNGTC	1 cut(s)	1878
EaeI	YGGCCR	1 cut(s)	381
Eam1104I	CTCTTC	3 cut(s)	162, 948, 1320
EarI	CTCTTC	3 cut(s)	162, 948, 1320
EciI	GGCGGA	1 cut(s)	597
Eco130I	CCWWGG	1 cut(s)	194
Eco147I	AGGCCT	1 cut(s)	1896
Eco24I	GRGCYC	2 cut(s)	206, 1203
Eco32I	GATATC	1 cut(s)	1074
Eco47I	GGWCC	8 cut(s)	355, 851, 1289, 1370, 1415, 1697, 1763, 2299
Eco47III	AGCGCT	1 cut(s)	506
Eco57I	CTGAAG	3 cut(s)	1470, 1557, 2058
Eco72I	CACGTG	2 cut(s)	19, 59
Eco88I	CYCGRG	2 cut(s)	84, 419
EcoO109I	RGGNCCY	1 cut(s)	1370
EcoRI	GAATTC	3 cut(s)	1958, 2032, 2312
EcoRII	CCWGG	5 cut(s)	1217, 1234, 1321, 1765, 2323
EcoRV	GATATC	1 cut(s)	1074
EcoT14I	CCWWGG	1 cut(s)	194
EcoT22I	ATGCAT	1 cut(s)	1405
EcoT38I	GRGCYC	2 cut(s)	206, 1203
ErhI	CCWWGG	1 cut(s)	194
FalI	AAGNNNNNCTT	2 cut(s)	1857, 1889
FaqI	GGGAC	3 cut(s)	157, 837, 847
FauI	CCCGC	3 cut(s)	572, 577, 1381
FblI	GTMKAC	1 cut(s)	1533
FokI	GGATG	6 cut(s)	38, 93, 878, 1202, 1782, 2065
FriOI	GRGCYC	2 cut(s)	206, 1203
FspBI	CTAG	4 cut(s)	114, 159, 212, 546
GlaI	GCGC	4 cut(s)	506, 550, 641, 643
GsuI	CTGGAG	4 cut(s)	304, 482, 1257, 1344
HaeII	RGCGCY	2 cut(s)	508, 552
HaeIII	GGCC	8 cut(s)	224, 383, 409, 456, 477, 726, 1231, 1896
HapII	CCGG	5 cut(s)	611, 723, 764, 1185, 2297
HgaI	GACGC	1 cut(s)	844
HhaI	GCGC	4 cut(s)	507, 551, 642, 644
Hin6I	GCGC	4 cut(s)	505, 549, 640, 642
HinP1I	GCGC	4 cut(s)	505, 549, 640, 642
HincII	GTYRAC	1 cut(s)	1939
HindII	GTYRAC	1 cut(s)	1939
HpaI	GTTAAC	1 cut(s)	1939
HpaII	CCGG	5 cut(s)	611, 723, 764, 1185, 2297
HphI	GGTGA	2 cut(s)	1208, 1448
Hpy166II	GTNNAC	4 cut(s)	1418, 1534, 1939, 2321
Hpy8I	GTNNAC	4 cut(s)	1418, 1534, 1939, 2321
Hpy99I	CGWCG	7 cut(s)	629, 632, 635, 638, 755, 758, 761
HpyAV	CCTTC	4 cut(s)	466, 492, 1601, 2091
HpyCH4IV	ACGT	4 cut(s)	18, 58, 1282, 1546
HpyF3I	CTNAG	6 cut(s)	219, 349, 1303, 1505, 1722, 2203
HpySE526I	ACGT	4 cut(s)	18, 58, 1282, 1546
HspAI	GCGC	4 cut(s)	505, 549, 640, 642
Kpn2I	TCCGGA	1 cut(s)	763
KspAI	GTTAAC	1 cut(s)	1939
LguI	GCTCTTC	1 cut(s)	948
LmnI	GCTCC	9 cut(s)	248, 323, 604, 666, 740, 937, 1028, 1276, 1651
LweI	GCATC	4 cut(s)	1390, 1859, 1991, 2127
MaeI	CTAG	4 cut(s)	114, 159, 212, 546
MaeII	ACGT	4 cut(s)	18, 58, 1282, 1546
MaeIII	GTNAC	3 cut(s)	44, 323, 1352
MfeI	CAATTG	2 cut(s)	137, 2222
MflI	RGATCY	3 cut(s)	776, 946, 1424
MhlI	GDGCHC	4 cut(s)	206, 253, 1203, 2323
MlsI	TGGCCA	1 cut(s)	383
MluNI	TGGCCA	1 cut(s)	383
MlyI	GAGTC	6 cut(s)	96, 179, 418, 456, 1306, 1796
MmeI	TCCRAC	4 cut(s)	134, 320, 361, 1144
Mox20I	TGGCCA	1 cut(s)	383
Mph1103I	ATGCAT	1 cut(s)	1405
MroI	TCCGGA	1 cut(s)	763
MroXI	GAANNNNTTC	1 cut(s)	506
MscI	TGGCCA	1 cut(s)	383
MseI	TTAA	3 cut(s)	1406, 1938, 1989
MslI	CAYNNNNRTG	2 cut(s)	57, 1659
Msp20I	TGGCCA	1 cut(s)	383
MspA1I	CMGCKG	1 cut(s)	331
MspI	CCGG	5 cut(s)	611, 723, 764, 1185, 2297
MspR9I	CCNGG	7 cut(s)	1186, 1219, 1236, 1323, 1767, 2297, 2325
MunI	CAATTG	2 cut(s)	137, 2222
Mva1269I	GAATGC	1 cut(s)	394
MvaI	CCWGG	5 cut(s)	1219, 1236, 1323, 1767, 2325
MvnI	CGCG	1 cut(s)	642
NciI	CCSGG	2 cut(s)	1186, 2297
NmuCI	GTSAC	2 cut(s)	44, 323
NsiI	ATGCAT	1 cut(s)	1405
NspI	RCATGY	2 cut(s)	2107, 2359
NspV	TTCGAA	1 cut(s)	311
OliI	CACNNNNGTG	1 cut(s)	57
PaeI	GCATGC	1 cut(s)	2359
PaeR7I	CTCGAG	1 cut(s)	84
PagI	TCATGA	1 cut(s)	970
PaqCI	CACCTGC	1 cut(s)	829
PauI	GCGCGC	1 cut(s)	640
PceI	AGGCCT	1 cut(s)	1896
PciSI	GCTCTTC	1 cut(s)	948
PcsI	WCGNNNNNNNCGW	3 cut(s)	621, 630, 633
PctI	GAATGC	1 cut(s)	394
PdmI	GAANNNNTTC	1 cut(s)	506
PfeI	GAWTC	5 cut(s)	367, 672, 2041, 2156, 2197
PflFI	GACNNNGTC	1 cut(s)	706
PflMI	CCANNNNNTGG	1 cut(s)	1627
PfoI	TCCNGGA	1 cut(s)	1765
PleI	GAGTC	6 cut(s)	95, 178, 418, 455, 1306, 1795
PmaCI	CACGTG	2 cut(s)	19, 59
PmlI	CACGTG	2 cut(s)	19, 59
PpsI	GAGTC	6 cut(s)	95, 178, 418, 455, 1306, 1795
Ppu21I	YACGTR	2 cut(s)	19, 59
PpuMI	RGGWCCY	1 cut(s)	1370
Psp5II	RGGWCCY	1 cut(s)	1370
Psp6I	CCWGG	5 cut(s)	1217, 1234, 1321, 1765, 2323
PspCI	CACGTG	2 cut(s)	19, 59
PspGI	CCWGG	5 cut(s)	1217, 1234, 1321, 1765, 2323
PspPPI	RGGWCCY	1 cut(s)	1370
PstI	CTGCAG	1 cut(s)	516
PstNI	CAGNNNCTG	1 cut(s)	1567
PsuI	RGATCY	3 cut(s)	776, 946, 1424
PsyI	GACNNNGTC	1 cut(s)	706
PteI	GCGCGC	1 cut(s)	640
PvuII	CAGCTG	1 cut(s)	331
RsaI	GTAC	4 cut(s)	146, 1511, 1888, 2079
RsaNI	GTAC	4 cut(s)	145, 1510, 1887, 2078
RseI	CAYNNNNRTG	2 cut(s)	57, 1659
SapI	GCTCTTC	1 cut(s)	948
SaqAI	TTAA	3 cut(s)	1406, 1938, 1989
SchI	GAGTC	6 cut(s)	96, 179, 418, 456, 1306, 1796
ScrFI	CCNGG	7 cut(s)	1186, 1219, 1236, 1323, 1767, 2297, 2325
SduI	GDGCHC	4 cut(s)	206, 253, 1203, 2323
SfaNI	GCATC	4 cut(s)	1390, 1859, 1991, 2127
SfcI	CTRYAG	4 cut(s)	512, 1555, 1951, 2142
Sfr274I	CTCGAG	1 cut(s)	84
SfuI	TTCGAA	1 cut(s)	311
SinI	GGWCC	8 cut(s)	355, 851, 1289, 1370, 1415, 1697, 1763, 2299
SlaI	CTCGAG	1 cut(s)	84
SmiMI	CAYNNNNRTG	2 cut(s)	57, 1659
SmlI	CTYRAG	1 cut(s)	84
SmoI	CTYRAG	1 cut(s)	84
SphI	GCATGC	1 cut(s)	2359
SseBI	AGGCCT	1 cut(s)	1896
SspI	AATATT	1 cut(s)	1298
SspMI	CTAG	4 cut(s)	114, 159, 212, 546
StuI	AGGCCT	1 cut(s)	1896
StyD4I	CCNGG	7 cut(s)	1184, 1217, 1234, 1321, 1765, 2295, 2323
StyI	CCWWGG	1 cut(s)	194
TaiI	ACGT	4 cut(s)	21, 61, 1285, 1549
TatI	WGTACW	1 cut(s)	1886
TauI	GCSGC	5 cut(s)	554, 557, 560, 563, 582
TfiI	GAWTC	5 cut(s)	367, 672, 2041, 2156, 2197
Tru1I	TTAA	3 cut(s)	1406, 1938, 1989
Tru9I	TTAA	3 cut(s)	1406, 1938, 1989
TscAI	CASTG	5 cut(s)	261, 268, 328, 384, 1999
TseFI	GTSAC	2 cut(s)	44, 323
Tsp45I	GTSAC	2 cut(s)	44, 323
TspGWI	ACGGA	3 cut(s)	727, 1527, 1805
TspRI	CASTG	5 cut(s)	261, 268, 328, 384, 1999
Tth111I	GACNNNGTC	1 cut(s)	706
Van91I	CCANNNNNTGG	1 cut(s)	1627
VneI	GTGCAC	1 cut(s)	2319
VpaK11BI	GGWCC	8 cut(s)	355, 851, 1289, 1370, 1415, 1697, 1763, 2299
XapI	RAATTY	7 cut(s)	1165, 1475, 1900, 1958, 2032, 2178, 2312
XceI	RCATGY	2 cut(s)	2107, 2359
XhoI	CTCGAG	1 cut(s)	84
XmiI	GTMKAC	1 cut(s)	1533
XmnI	GAANNNNTTC	1 cut(s)	506
XspI	CTAG	4 cut(s)	114, 159, 212, 546
Zsp2I	ATGCAT	1 cut(s)	1405

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.