Rmu_sc0001051.1_g000055

CLK4-associating serine arginine rich

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001051.1
OG0004786
Physical Location & Seq
Forward (+)
171827 .. 177804
5978 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2019 bp
atgatcgtccatattcttgatcctgaaaaggattttcttcgttcaaaggatgatgacgaagatgtgctagaggcaagagcgtcttacttgagtacaataggcacattattgtacttaactcaatgcacaagaccagacatctcatttgcagtgaacttgttagctaagagagatgatggattcgaacccatcacacaccaggaacgccgccaacactggccggcgtcctctatccccatcccaaaacgacatgtgttttggaaggttttgctgatattagtcgtcagggggagatgcagacatcagggggaggtgtctacatgtatggtctcaaaaagtgaaggtcgaatcggagaagaaacgatgtggcacgaagcgaggaggtcggagaggaaagtccacgacatgatggacgctgctcgcaaacgagctcaacgacgtgccgttttcctcgccaaacgccgcggcgatccccagcagtccatccaggtcgtcggctcccgctgccgcctctaccgcgacgacggcctttatcaagccaccgaggatcagcaaggcctgattccttggaatggaaaacaggatgtgttaattgacagatttgatgggcgtgcgcttctcgattttattcgagagtctaagcattttcgtgttcaagagaagtcggaagaggaggaagagttagaagagtttgttaattttgagcgttatcgggatttaattaagcatcgtcgtagaggatttactgatgatgagggtttgctacacgtgaatcaagagatggaggccaaggttactgctccgtttgcacctgagaggtctcagccgcaacaagcttctgccaccaagggttcttattcccaagttgggttctcttatggtggggatggaaaagaggacgcccagtattcagatgctgatgaagacgatgacgatgatgacgatgacgaagatgaggatgatttcaactctgatgatagcagtgatgaaggaatggataaaatagcaaaagaatttggaatcaagaggtatggttggcttgtctacatggataagaaagccaaggaggaggagaaaaggcaaaaggaagtgatcaaaggcgatcctgcaattaggaagatgagtcgcaaggaaagaaggaaggtttctcagatagaaagggagagagaaagagaaactgcccgggtaactggaactcgtgttctccaacatgatccataccgtgaaagcaggcgaagtccaacatatgaagcttatcctcgttcaagaagatcaagatctcgatcaccatcatactcaaggcgtcatcctcgcggacgacattctgatgctcatagaagcaaaccaacgacttctaaaattgaatacattacagaatttgggggctcaggcgataaggaagaatcaaagcgtgaagggttttctccaccacaatctcctcgctcacagactgatgtgttaaaccggtcttcaactggtgtaatacttgaggctctgcatgtcgatcctgcatccggtgcattgcttgacaaggataagagcactaaagtggtgaagccatcagcaagcacatcttcagcattagcaaagttaagtaagacaagtacttctgtggggtcactgaagcagcaaccagcagagaagaaagaaactcctcaagaaagacttaaaaggattatgagcaagcagctgaacaaacagattaagaaagatactgccgctgaaatggctaaaaagcgagagcaggagcgccagaggctggaaaaacttgccgaaacaagccggttaagtcgatctaggcgccatagtcgtagcaggagctacagccgttctccaccaagaagacaccgacgcagtagaagtccaagtcgaagcaggagttcccgacgacattactcccgttctaggtcaaggtcccgctcccggtctcgttctcactccaggtctggctcccgtacccgtactcgctcacgcacgtactcccgctcaccaagggtaacaagccgttcaagatactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DRY_EERY

Protein Analysis

672

Amino Acids

78.07

Weight (kDa)

9.94

Isoelectric Point (pI)

83.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DRY_EERY PF09750 162 - 295 1.8e-40 Alternative splicing regulator
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1800
AccB7I CCANNNNNTGG 1 cut(s) 1759
AccBSI CCGCTC 2 cut(s) 1920, 1986
AccI GTMKAC 2 cut(s) 317, 1044
AccII CGCG 3 cut(s) 465, 519, 1314
AclWI GGATC 6 cut(s) 14, 464, 555, 1097, 1208, 1499
AcoI YGGCCR 1 cut(s) 218
AcsI RAATTY 2 cut(s) 1013, 1376
AcuI CTGAAG 2 cut(s) 1560, 1643
AcvI CACGTG 1 cut(s) 769
AcyI GRCGYC 4 cut(s) 224, 900, 1303, 1801
AfaI GTAC 6 cut(s) 94, 113, 1606, 1957, 1963, 1979
AfiI CCNNNNNNNGG 6 cut(s) 572, 867, 1514, 1759, 1905, 1923
AflIII ACRYGT 3 cut(s) 250, 320, 766
AgeI ACCGGT 1 cut(s) 1464
AgsI TTSAA 7 cut(s) 45, 656, 967, 1266, 1364, 1473, 2010
AjiI CACGTC 1 cut(s) 440
AjnI CCWGG 3 cut(s) 198, 486, 1940
AleI CACNNNNGTG 1 cut(s) 1547
AloI GAACNNNNNNTCC 2 cut(s) 1185, 1217
AluBI AGCT 6 cut(s) 164, 431, 836, 1253, 1690, 1821
AluI AGCT 6 cut(s) 164, 431, 836, 1253, 1690, 1821
Alw21I GWGCWC 2 cut(s) 433, 1544
Alw26I GTCTC 3 cut(s) 334, 825, 1932
AlwI GGATC 6 cut(s) 14, 464, 555, 1097, 1208, 1499
AlwNI CAGNNNCTG 2 cut(s) 917, 1759
Ama87I CYCGRG 1 cut(s) 1182
AoxI GGCC 4 cut(s) 218, 526, 556, 786
ApeKI GCWGC 4 cut(s) 416, 504, 1627, 1687
ApoI RAATTY 2 cut(s) 1013, 1376
ArsI GACNNNNNNTTYG 4 cut(s) 128, 160, 240, 272
AsiGI ACCGGT 1 cut(s) 1464
AspLEI GCGC 3 cut(s) 616, 1752, 1803
AspS9I GGNCC 1 cut(s) 1914
AsuC2I CCSGG 3 cut(s) 1183, 1184, 1924
AsuHPI GGTGA 3 cut(s) 1278, 1564, 1980
AsuII TTCGAA 1 cut(s) 183
AvaI CYCGRG 1 cut(s) 1182
AvaII GGWCC 1 cut(s) 1914
BanI GGYRCC 1 cut(s) 1800
BanII GRGCYC 2 cut(s) 433, 1388
BauI CACGAG 1 cut(s) 1197
BbrPI CACGTG 1 cut(s) 769
BbsI GAAGAC 3 cut(s) 930, 1461, 1849
Bbv12I GWGCWC 2 cut(s) 433, 1544
BbvI GCAGC 4 cut(s) 403, 491, 1639, 1699
BceAI ACGGC 4 cut(s) 428, 541, 1812, 1989
BciT130I CCWGG 3 cut(s) 200, 488, 1942
BclI TGATCA 1 cut(s) 1092
BcnI CCSGG 3 cut(s) 1183, 1184, 1924
BcoDI GTCTC 3 cut(s) 334, 825, 1932
BfaI CTAG 3 cut(s) 68, 1797, 1905
BfmI CTRYAG 1 cut(s) 1822
BfoI RGCGCY 2 cut(s) 1753, 1804
BglII AGATCT 1 cut(s) 1277
BmcAI AGTACT 1 cut(s) 1606
Bme1390I CCNGG 6 cut(s) 200, 488, 1183, 1184, 1924, 1942
Bme18I GGWCC 1 cut(s) 1914
BmeT110I CYCGRG 1 cut(s) 1182
BmgBI CACGTC 1 cut(s) 440
BmgT120I GGNCC 1 cut(s) 1914
BmiI GGNNCC 4 cut(s) 499, 1802, 1916, 1951
BmrFI CCNGG 6 cut(s) 200, 488, 1183, 1184, 1924, 1942
BmrI ACTGGG 1 cut(s) 898
BmsI GCATC 5 cut(s) 284, 736, 904, 1318, 1520
BmuI ACTGGG 1 cut(s) 898
BpiI GAAGAC 3 cut(s) 930, 1461, 1849
BpmI CTGGAG 1 cut(s) 1924
Bpu10I CCTNAGC 1 cut(s) 1387
Bpu14I TTCGAA 1 cut(s) 183
BpuEI CTTGAG 4 cut(s) 109, 1282, 1508, 1641
BpuMI CCSGG 3 cut(s) 1183, 1184, 1924
BsaAI YACGTR 2 cut(s) 769, 1977
BsaBI GATNNNNATC 3 cut(s) 1276, 1282, 1288
BsaHI GRCGYC 4 cut(s) 224, 900, 1303, 1801
BsaI GGTCTC 3 cut(s) 334, 825, 1932
BsaJI CCNNGG 8 cut(s) 463, 543, 566, 789, 846, 1062, 1182, 1991
BsaWI WCCGGW 2 cut(s) 1464, 1514
BsaXI ACNNNNNCTCC 2 cut(s) 665, 695
Bsc4I CCNNNNNNNGG 6 cut(s) 572, 867, 1514, 1759, 1905, 1923
Bse118I RCCGGY 3 cut(s) 220, 1464, 1782
Bse1I ACTGG 4 cut(s) 221, 904, 1195, 1480
Bse3DI GCAATG 1 cut(s) 1520
Bse8I GATNNNNATC 3 cut(s) 1276, 1282, 1288
BseBI CCWGG 3 cut(s) 200, 488, 1942
BseDI CCNNGG 8 cut(s) 463, 543, 566, 789, 846, 1062, 1182, 1991
BseGI GGATG 8 cut(s) 55, 237, 483, 589, 892, 964, 1306, 1511
BseJI GATNNNNATC 3 cut(s) 1276, 1282, 1288
BseLI CCNNNNNNNGG 6 cut(s) 572, 867, 1514, 1759, 1905, 1923
BseMI GCAATG 1 cut(s) 1520
BseMII CTCAG 4 cut(s) 804, 836, 1163, 1401
BseNI ACTGG 4 cut(s) 221, 904, 1195, 1480
BseRI GAGGAG 6 cut(s) 394, 686, 1082, 1085, 1428, 1644
BseXI GCAGC 4 cut(s) 403, 491, 1639, 1699
BseYI CCCAGC 1 cut(s) 474
Bsh1236I CGCG 3 cut(s) 465, 519, 1314
BshFI GGCC 4 cut(s) 220, 528, 558, 788
BshNI GGYRCC 1 cut(s) 1800
BshTI ACCGGT 1 cut(s) 1464
BsiHKAI GWGCWC 2 cut(s) 433, 1544
BsiHKCI CYCGRG 1 cut(s) 1182
BsiSI CCGG 6 cut(s) 221, 1183, 1465, 1515, 1783, 1924
BslFI GGGAC 1 cut(s) 1900
BslI CCNNNNNNNGG 6 cut(s) 572, 867, 1514, 1759, 1905, 1923
BsmAI GTCTC 3 cut(s) 334, 825, 1932
BsmFI GGGAC 1 cut(s) 1900
BsnI GGCC 4 cut(s) 220, 528, 558, 788
Bso31I GGTCTC 3 cut(s) 334, 825, 1932
BsoBI CYCGRG 1 cut(s) 1182
Bsp119I TTCGAA 1 cut(s) 183
Bsp1286I GDGCHC 3 cut(s) 433, 1388, 1544
BspANI GGCC 4 cut(s) 220, 528, 558, 788
BspCNI CTCAG 4 cut(s) 805, 835, 1162, 1400
BspFNI CGCG 3 cut(s) 465, 519, 1314
BspLI GGNNCC 4 cut(s) 499, 1802, 1916, 1951
BspPI GGATC 6 cut(s) 14, 464, 555, 1097, 1208, 1499
BspT104I TTCGAA 1 cut(s) 183
BspT107I GGYRCC 1 cut(s) 1800
BspTNI GGTCTC 3 cut(s) 334, 825, 1932
BsrBI CCGCTC 2 cut(s) 1920, 1986
BsrDI GCAATG 1 cut(s) 1520
BsrFI RCCGGY 3 cut(s) 220, 1464, 1782
BsrI ACTGG 4 cut(s) 221, 904, 1195, 1480
BssAI RCCGGY 3 cut(s) 220, 1464, 1782
BssECI CCNNGG 8 cut(s) 463, 543, 566, 789, 846, 1062, 1182, 1991
BssNI GRCGYC 4 cut(s) 224, 900, 1303, 1801
BssSI CACGAG 1 cut(s) 1197
BssT1I CCWWGG 5 cut(s) 566, 789, 846, 1062, 1991
Bst2BI CACGAG 1 cut(s) 1197
Bst2UI CCWGG 3 cut(s) 200, 488, 1942
Bst4CI ACNGT 1 cut(s) 1223
Bst6I CTCTTC 3 cut(s) 663, 672, 681
BstACI GRCGYC 4 cut(s) 224, 900, 1303, 1801
BstAPI GCANNNNNTGC 1 cut(s) 1517
BstBAI YACGTR 2 cut(s) 769, 1977
BstBI TTCGAA 1 cut(s) 183
BstC8I GCNNGC 6 cut(s) 222, 421, 612, 1232, 1567, 1685
BstDEI CTNAG 6 cut(s) 165, 639, 813, 822, 1149, 1387
BstDSI CCRYGG 1 cut(s) 463
BstF5I GGATG 8 cut(s) 55, 237, 483, 589, 892, 964, 1306, 1511
BstFNI CGCG 3 cut(s) 465, 519, 1314
BstH2I RGCGCY 2 cut(s) 1753, 1804
BstHHI GCGC 3 cut(s) 616, 1752, 1803
BstMAI GTCTC 3 cut(s) 334, 825, 1932
BstMWI GCNNNNNNNGC 7 cut(s) 504, 516, 525, 806, 1517, 1727, 1756
BstNI CCWGG 3 cut(s) 200, 488, 1942
BstNSI RCATGY 3 cut(s) 254, 324, 1502
BstSCI CCNGG 6 cut(s) 198, 486, 1181, 1182, 1922, 1940
BstSFI CTRYAG 1 cut(s) 1822
BstUI CGCG 3 cut(s) 465, 519, 1314
BstV1I GCAGC 4 cut(s) 403, 491, 1639, 1699
BstV2I GAAGAC 3 cut(s) 930, 1461, 1849
BstX2I RGATCY 1 cut(s) 1277
BstYI RGATCY 1 cut(s) 1277
BsuRI GGCC 4 cut(s) 220, 528, 558, 788
BtgI CCRYGG 1 cut(s) 463
BtrI CACGTC 1 cut(s) 440
BtsCI GGATG 8 cut(s) 55, 237, 483, 589, 892, 964, 1306, 1511
BtsI GCAGTG 2 cut(s) 156, 988
BtsIMutI CAGTG 4 cut(s) 156, 214, 988, 1619
Cac8I GCNNGC 6 cut(s) 222, 421, 612, 1232, 1567, 1685
CaiI CAGNNNCTG 2 cut(s) 917, 1759
CfoI GCGC 3 cut(s) 616, 1752, 1803
Cfr10I RCCGGY 3 cut(s) 220, 1464, 1782
Cfr13I GGNCC 1 cut(s) 1914
Cfr42I CCGCGG 1 cut(s) 466
Cfr9I CCCGGG 1 cut(s) 1182
CseI GACGC 6 cut(s) 69, 213, 422, 908, 1292, 1860
Csp6I GTAC 6 cut(s) 93, 112, 1605, 1956, 1962, 1978
CspAI ACCGGT 1 cut(s) 1464
CviAII CATG 6 cut(s) 251, 321, 406, 1048, 1211, 1499
CviQI GTAC 6 cut(s) 93, 112, 1605, 1956, 1962, 1978
DdeI CTNAG 6 cut(s) 165, 639, 813, 822, 1149, 1387
DinI GGCGCC 1 cut(s) 1802
EaeI YGGCCR 1 cut(s) 218
Eam1104I CTCTTC 3 cut(s) 663, 672, 681
EarI CTCTTC 3 cut(s) 663, 672, 681
Ecl136II GAGCTC 1 cut(s) 431
Eco130I CCWWGG 5 cut(s) 566, 789, 846, 1062, 1991
Eco147I AGGCCT 1 cut(s) 558
Eco24I GRGCYC 2 cut(s) 433, 1388
Eco31I GGTCTC 3 cut(s) 334, 825, 1932
Eco47I GGWCC 1 cut(s) 1914
Eco53kI GAGCTC 1 cut(s) 431
Eco57I CTGAAG 2 cut(s) 1560, 1643
Eco72I CACGTG 1 cut(s) 769
Eco88I CYCGRG 1 cut(s) 1182
EcoICRI GAGCTC 1 cut(s) 431
EcoO109I RGGNCCY 1 cut(s) 1914
EcoRII CCWGG 3 cut(s) 198, 486, 1940
EcoT14I CCWWGG 5 cut(s) 566, 789, 846, 1062, 1991
EcoT38I GRGCYC 2 cut(s) 433, 1388
EgeI GGCGCC 1 cut(s) 1802
EheI GGCGCC 1 cut(s) 1802
ErhI CCWWGG 5 cut(s) 566, 789, 846, 1062, 1991
FaeI CATG 6 cut(s) 254, 324, 409, 1051, 1214, 1502
FalI AAGNNNNNCTT 6 cut(s) 67, 99, 1558, 1590, 1650, 1682
FaqI GGGAC 1 cut(s) 1900
FatI CATG 6 cut(s) 250, 320, 405, 1047, 1210, 1498
FauI CCCGC 3 cut(s) 509, 1925, 1991
FauNDI CATATG 1 cut(s) 1246
FbaI TGATCA 1 cut(s) 1092
FblI GTMKAC 2 cut(s) 317, 1044
FokI GGATG 8 cut(s) 62, 224, 470, 596, 899, 971, 1293, 1498
FriOI GRGCYC 2 cut(s) 433, 1388
FspBI CTAG 3 cut(s) 68, 1797, 1905
GlaI GCGC 3 cut(s) 615, 1751, 1802
GsaI CCCAGC 1 cut(s) 478
GsuI CTGGAG 1 cut(s) 1924
HaeII RGCGCY 2 cut(s) 1753, 1804
HaeIII GGCC 4 cut(s) 220, 528, 558, 788
HapII CCGG 6 cut(s) 221, 1183, 1465, 1515, 1783, 1924
HgaI GACGC 6 cut(s) 69, 213, 422, 908, 1292, 1860
HhaI GCGC 3 cut(s) 616, 1752, 1803
Hin1I GRCGYC 4 cut(s) 224, 900, 1303, 1801
Hin1II CATG 6 cut(s) 254, 324, 409, 1051, 1214, 1502
Hin6I GCGC 3 cut(s) 614, 1750, 1801
HinP1I GCGC 3 cut(s) 614, 1750, 1801
HindIII AAGCTT 2 cut(s) 834, 1251
HinfI GANTC 8 cut(s) 180, 348, 562, 635, 772, 1020, 1123, 1403
HpaII CCGG 6 cut(s) 221, 1183, 1465, 1515, 1783, 1924
HphI GGTGA 3 cut(s) 1278, 1564, 1980
Hpy166II GTNNAC 4 cut(s) 154, 318, 400, 1045
Hpy188I TCNGA 7 cut(s) 353, 388, 667, 913, 973, 1152, 1327
Hpy8I GTNNAC 4 cut(s) 154, 318, 400, 1045
Hpy99I CGWCG 7 cut(s) 441, 497, 524, 527, 735, 1854, 1890
HpyAV CCTTC 6 cut(s) 256, 335, 983, 1131, 1135, 1409
HpyCH4III ACNGT 1 cut(s) 1223
HpyCH4IV ACGT 3 cut(s) 439, 768, 1976
HpyCH4V TGCA 8 cut(s) 126, 149, 297, 809, 1109, 1498, 1511, 1520
HpyF10VI GCNNNNNNNGC 7 cut(s) 504, 516, 525, 806, 1517, 1727, 1756
HpyF3I CTNAG 6 cut(s) 165, 639, 813, 822, 1149, 1387
HpySE526I ACGT 3 cut(s) 439, 768, 1976
Hsp92I GRCGYC 4 cut(s) 224, 900, 1303, 1801
Hsp92II CATG 6 cut(s) 254, 324, 409, 1051, 1214, 1502
HspAI GCGC 3 cut(s) 614, 1750, 1801
KasI GGCGCC 1 cut(s) 1800
KroI GCCGGC 1 cut(s) 220
KroNI GCCGGC 1 cut(s) 222
Ksp22I TGATCA 1 cut(s) 1092
KspI CCGCGG 1 cut(s) 466
LmnI GCTCC 6 cut(s) 503, 805, 1747, 1818, 1925, 1955
Lsp1109I GCAGC 4 cut(s) 403, 491, 1639, 1699
LweI GCATC 5 cut(s) 284, 736, 904, 1318, 1520
MaeI CTAG 3 cut(s) 68, 1797, 1905
MaeII ACGT 3 cut(s) 439, 768, 1976
MaeIII GTNAC 4 cut(s) 793, 1186, 1617, 1996
MbiI CCGCTC 2 cut(s) 1920, 1986
MflI RGATCY 1 cut(s) 1277
MhlI GDGCHC 3 cut(s) 433, 1388, 1544
MluCI AATT 7 cut(s) 591, 697, 720, 1013, 1110, 1359, 1376
Mly113I GGCGCC 1 cut(s) 1801
MlyI GAGTC 2 cut(s) 644, 1132
MmeI TCCRAC 4 cut(s) 366, 645, 1231, 1265
MroNI GCCGGC 1 cut(s) 220
MslI CAYNNNNRTG 3 cut(s) 648, 1326, 1547
MspA1I CMGCKG 4 cut(s) 465, 504, 1690, 1721
MspI CCGG 6 cut(s) 221, 1183, 1465, 1515, 1783, 1924
MspR9I CCNGG 6 cut(s) 200, 488, 1183, 1184, 1924, 1942
MvaI CCWGG 3 cut(s) 200, 488, 1942
MvnI CGCG 3 cut(s) 465, 519, 1314
MwoI GCNNNNNNNGC 7 cut(s) 504, 516, 525, 806, 1517, 1727, 1756
NaeI GCCGGC 1 cut(s) 222
NarI GGCGCC 1 cut(s) 1801
NciI CCSGG 3 cut(s) 1183, 1184, 1924
NdeI CATATG 1 cut(s) 1246
NgoMIV GCCGGC 1 cut(s) 220
NlaIII CATG 6 cut(s) 254, 324, 409, 1051, 1214, 1502
NlaIV GGNNCC 4 cut(s) 499, 1802, 1916, 1951
NmuCI GTSAC 1 cut(s) 1617
NspI RCATGY 3 cut(s) 254, 324, 1502
NspV TTCGAA 1 cut(s) 183
OliI CACNNNNGTG 1 cut(s) 1547
PacI TTAATTAA 1 cut(s) 723
PceI AGGCCT 1 cut(s) 558
PciI ACATGT 2 cut(s) 250, 320
PcsI WCGNNNNNNNCGW 2 cut(s) 433, 939
PdiI GCCGGC 1 cut(s) 222
PfeI GAWTC 6 cut(s) 180, 348, 562, 772, 1020, 1403
PflMI CCANNNNNTGG 1 cut(s) 1759
PinAI ACCGGT 1 cut(s) 1464
PleI GAGTC 2 cut(s) 643, 1131
PluTI GGCGCC 1 cut(s) 1804
PmaCI CACGTG 1 cut(s) 769
PmlI CACGTG 1 cut(s) 769
PpsI GAGTC 2 cut(s) 643, 1131
Ppu21I YACGTR 2 cut(s) 769, 1977
PpuMI RGGWCCY 1 cut(s) 1914
PscI ACATGT 2 cut(s) 250, 320
Psp124BI GAGCTC 1 cut(s) 433
Psp5II RGGWCCY 1 cut(s) 1914
Psp6I CCWGG 3 cut(s) 198, 486, 1940
PspCI CACGTG 1 cut(s) 769
PspFI CCCAGC 1 cut(s) 474
PspGI CCWGG 3 cut(s) 198, 486, 1940
PspN4I GGNNCC 4 cut(s) 499, 1802, 1916, 1951
PspPI GGNCC 1 cut(s) 1914
PspPPI RGGWCCY 1 cut(s) 1914
PstNI CAGNNNCTG 2 cut(s) 917, 1759
PsuI RGATCY 1 cut(s) 1277
PvuII CAGCTG 1 cut(s) 1690
RsaI GTAC 6 cut(s) 94, 113, 1606, 1957, 1963, 1979
RsaNI GTAC 6 cut(s) 93, 112, 1605, 1956, 1962, 1978
RseI CAYNNNNRTG 3 cut(s) 648, 1326, 1547
SacI GAGCTC 1 cut(s) 433
SacII CCGCGG 1 cut(s) 466
Sau96I GGNCC 1 cut(s) 1914
ScaI AGTACT 1 cut(s) 1606
SchI GAGTC 2 cut(s) 644, 1132
ScrFI CCNGG 6 cut(s) 200, 488, 1183, 1184, 1924, 1942
SduI GDGCHC 3 cut(s) 433, 1388, 1544
SfaNI GCATC 5 cut(s) 284, 736, 904, 1318, 1520
SfcI CTRYAG 1 cut(s) 1822
SfoI GGCGCC 1 cut(s) 1802
Sfr303I CCGCGG 1 cut(s) 466
SfuI TTCGAA 1 cut(s) 183
SgrBI CCGCGG 1 cut(s) 466
SinI GGWCC 1 cut(s) 1914
SmaI CCCGGG 1 cut(s) 1184
SmiMI CAYNNNNRTG 3 cut(s) 648, 1326, 1547
SmlI CTYRAG 4 cut(s) 88, 1297, 1487, 1656
SmoI CTYRAG 4 cut(s) 88, 1297, 1487, 1656
Sse9I AATT 7 cut(s) 591, 697, 720, 1013, 1110, 1359, 1376
SseBI AGGCCT 1 cut(s) 558
SspDI GGCGCC 1 cut(s) 1800
SspMI CTAG 3 cut(s) 68, 1797, 1905
SstI GAGCTC 1 cut(s) 433
StuI AGGCCT 1 cut(s) 558
StyD4I CCNGG 6 cut(s) 198, 486, 1181, 1182, 1922, 1940
StyI CCWWGG 5 cut(s) 566, 789, 846, 1062, 1991
TaaI ACNGT 1 cut(s) 1223
TaiI ACGT 3 cut(s) 442, 771, 1979
TaqI TCGA 8 cut(s) 183, 346, 621, 631, 1282, 1503, 1792, 1870
TasI AATT 7 cut(s) 591, 697, 720, 1013, 1110, 1359, 1376
TatI WGTACW 3 cut(s) 92, 111, 1604
TauI GCSGC 6 cut(s) 210, 465, 468, 510, 829, 1721
TfiI GAWTC 6 cut(s) 180, 348, 562, 772, 1020, 1403
TscAI CASTG 4 cut(s) 156, 221, 988, 1626
TseFI GTSAC 1 cut(s) 1617
TseI GCWGC 4 cut(s) 416, 504, 1627, 1687
Tsp45I GTSAC 1 cut(s) 1617
TspDTI ATGAA 3 cut(s) 936, 1002, 1263
TspGWI ACGGA 1 cut(s) 792
TspMI CCCGGG 1 cut(s) 1182
TspRI CASTG 4 cut(s) 156, 221, 988, 1626
Van91I CCANNNNNTGG 1 cut(s) 1759
VpaK11BI GGWCC 1 cut(s) 1914
XapI RAATTY 2 cut(s) 1013, 1376
XceI RCATGY 3 cut(s) 254, 324, 1502
XmaI CCCGGG 1 cut(s) 1182
XmiI GTMKAC 2 cut(s) 317, 1044
XspI CTAG 3 cut(s) 68, 1797, 1905
ZrmI AGTACT 1 cut(s) 1606
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.