Rroxscaffold_2G00137990

CLK4-associating serine arginine rich

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0004786
Physical Location & Seq
Reverse (-)
75995583 .. 76009803
14221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00137990.1

Sequence Viewer

Length: 1590 bp
ATGTGGCACGAAGCGAGGAGGTCGGAGAGGAAAGTCCACGACATGATGGACGCCGCTCGCAAACGAGCTCAACGACGTGCCGTTTTCCTCGCCAAACGCCGCGGCGATCCCCAGCAGTCCATCCAGGTCGTCGGCTCCCGCTGCCGCCTCTACCGCGACGACGGCCTTTATCAAGCCACCGAGGATCAGCAAGGCCTGATTCCTTGGAATGGAAAACAGGATGTGTTAATTGACAGATTTGATGGGCGTGCGCTTCTCGATTTTATTCGAGAGTCCAAGCATTTTCGTGTTCAAGAGAAGTCGGAAGAGGAGGAAGAGTTAGAAGAGTTTGTTAATTTTGAGCGTTATCGGGATTTAATTAAGCATCGTCGTAGAGGATTTACTGATGATGAGGGTTTGCTACACGTGAATCAAGAGATGGAGGCCAAGGTTACTGCTCCATTTGCACCGGAGAGGTCTCAGCCGCAACAAGCTTCTGCCACCAAGGGTTCTTATTCCCAAGTTGGGTTCTCTTATGGTGGGGATGGAAAAGAGGACGCCCAGTATTCAGATGCTGATGAAGACGATGACGATGATGACGATGACGAAGATGAGGATGATTTCAACTCTGATGATAGCAGTGATGAAGGAATGGATAAAATAGCAAAAGAATTTGGAATCAAGAGGTATGGTTGGCTTGTCTACATGGATAAGAAAGCCAAGGAGGAGGAGAAAAGGCAAAAGGAAGTGATCAAAGGCGATCCTGCAATTAGGAAGATGAGTCGCAAGGAAAGAAGGAAGGTTTCTCAGATAGAAAGGAGAGAGAAAGAGAAACTGCCCGGATCTCGATCACCATCATACTCAAGGCGTCATCCTCCAGCTGAACAAACAGACAGGAGTTCCCGACGACATTACTCCCGTTCTAGGTCAAGGTCCCGTTCCCGGTCTCGTTCTCACTCCAGACTGATTCAAAGAATGACATTACAGGGAGTTGAAATAGCCCTTATTTACCTACTTCCTAGGTTTCTTGGTTTCAGAATAGGGACTGTCGTTGAATATATTTTATGGCTAGCAGGGATCCAAGCATTTGAATTTGACCGTCTCTGTAGGTTTCTGTTTTCAAGAAGCCCCATCTGGACCCTCTTAGAACATGATTCCACACGGGAGTTGTTAGAAAGTTGTCAATCTGATTATCAATCAATTGTTTCCATTTATGTAAATATTATAAGCGAAGTGATGGACGACATTAATGGTCTACTTGCGTTTGCATCCTCTAGCAAAATACTTAAAAACCAAGACGGCTCAACTTCTTTCTATATTAGAACAAAACATACTTATCTAGAGAGGACCAAAGAAACAATGAGAAAGCAATTAGGTCAAAGTCTAAAAAAAATCACCATATTCATAAAAAGGAAAAAAAAAATCTTCCAAAAGAAAAATCCAGCCGGGTCTGTCCGAACCCGAATTCGCCCGCGCCGAGGCCGAGTTCGGCTTCGCATTCCCGCCCGACCTCAAAGCCGTTCTCTCCGCCGGCCTTCCGGTGGGCCCAGTCGTGGGGTCCGAGACCCTCCGACCCCGAAAAGGCCCTCCGGGTCGCGAGGACCGCCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DRY_EERY

Protein Analysis

529

Amino Acids

61.77

Weight (kDa)

9.8

Isoelectric Point (pI)

73.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DRY_EERY PF09750 41 - 174 1.2e-40 Alternative splicing regulator
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1205
AccBSI CCGCTC 1 cut(s) 56
AccI GTMKAC 2 cut(s) 681, 1234
AccII CGCG 4 cut(s) 102, 156, 1453, 1576
AclWI GGATC 6 cut(s) 101, 192, 734, 829, 1051, 1064
AcsI RAATTY 3 cut(s) 650, 1070, 1443
AcvI CACGTG 1 cut(s) 406
AcyI GRCGYC 3 cut(s) 51, 537, 847
AfiI CCNNNNNNNGG 9 cut(s) 209, 504, 903, 921, 1457, 1520, 1532, 1533, 1560
AflIII ACRYGT 1 cut(s) 403
AgsI TTSAA 7 cut(s) 293, 604, 950, 974, 1034, 1070, 1101
AjiI CACGTC 1 cut(s) 77
AjnI CCWGG 1 cut(s) 123
AluBI AGCT 3 cut(s) 68, 473, 860
AluI AGCT 3 cut(s) 68, 473, 860
Alw21I GWGCWC 1 cut(s) 70
Alw26I GTCTC 4 cut(s) 462, 930, 1085, 1536
AlwI GGATC 6 cut(s) 101, 192, 734, 829, 1051, 1064
AlwNI CAGNNNCTG 1 cut(s) 554
AoxI GGCC 7 cut(s) 163, 193, 423, 1459, 1511, 1523, 1562
ApaI GGGCCC 1 cut(s) 1527
ApeKI GCWGC 1 cut(s) 141
ApoI RAATTY 3 cut(s) 650, 1070, 1443
AseI ATTAAT 1 cut(s) 1227
AspA2I CCTAGG 1 cut(s) 998
AspLEI GCGC 2 cut(s) 253, 1455
AspS9I GGNCC 8 cut(s) 912, 1116, 1326, 1523, 1524, 1537, 1563, 1580
AsuC2I CCSGG 4 cut(s) 819, 922, 1426, 1570
AsuHPI GGTGA 2 cut(s) 822, 1366
AsuNHI GCTAGC 1 cut(s) 1048
AvaII GGWCC 5 cut(s) 912, 1116, 1326, 1537, 1580
AvrII CCTAGG 1 cut(s) 998
BaeGI GKGCMC 1 cut(s) 1527
BamHI GGATCC 1 cut(s) 1056
BanII GRGCYC 2 cut(s) 70, 1527
BbrPI CACGTG 1 cut(s) 406
BbsI GAAGAC 1 cut(s) 567
Bbv12I GWGCWC 1 cut(s) 70
BbvI GCAGC 1 cut(s) 128
BccI CCATC 8 cut(s) 40, 128, 236, 412, 518, 841, 1118, 1210
BceAI ACGGC 4 cut(s) 65, 178, 1294, 1482
BciT130I CCWGG 1 cut(s) 125
BclI TGATCA 1 cut(s) 729
BcnI CCSGG 4 cut(s) 819, 922, 1426, 1570
BcoDI GTCTC 4 cut(s) 462, 930, 1085, 1536
BfaI CTAG 5 cut(s) 903, 999, 1049, 1254, 1319
BfmI CTRYAG 1 cut(s) 1084
BisI GCNGC 6 cut(s) 54, 100, 103, 142, 145, 464
BlnI CCTAGG 1 cut(s) 998
BlsI GCNGC 6 cut(s) 55, 101, 104, 143, 146, 465
Bme1390I CCNGG 5 cut(s) 125, 819, 922, 1426, 1570
Bme18I GGWCC 5 cut(s) 912, 1116, 1326, 1537, 1580
BmgBI CACGTC 1 cut(s) 77
BmgT120I GGNCC 8 cut(s) 912, 1116, 1326, 1523, 1524, 1537, 1563, 1580
BmiI GGNNCC 6 cut(s) 136, 914, 1058, 1118, 1525, 1538
BmrFI CCNGG 5 cut(s) 125, 819, 922, 1426, 1570
BmrI ACTGGG 2 cut(s) 535, 1521
BmsI GCATC 3 cut(s) 373, 541, 1256
BmtI GCTAGC 1 cut(s) 1052
BmuI ACTGGG 2 cut(s) 535, 1521
BpiI GAAGAC 1 cut(s) 567
BpmI CTGGAG 2 cut(s) 840, 922
BpuEI CTTGAG 1 cut(s) 826
BpuMI CCSGG 4 cut(s) 819, 922, 1426, 1570
BsaAI YACGTR 1 cut(s) 406
BsaBI GATNNNNATC 2 cut(s) 826, 832
BsaHI GRCGYC 3 cut(s) 51, 537, 847
BsaI GGTCTC 3 cut(s) 462, 930, 1536
BsaJI CCNNGG 8 cut(s) 100, 180, 203, 426, 483, 699, 998, 1456
BsaWI WCCGGW 2 cut(s) 448, 1517
BsaXI ACNNNNNCTCC 2 cut(s) 302, 332
Bsc4I CCNNNNNNNGG 9 cut(s) 209, 504, 903, 921, 1457, 1520, 1532, 1533, 1560
Bse118I RCCGGY 1 cut(s) 1509
Bse1I ACTGG 2 cut(s) 541, 1527
Bse8I GATNNNNATC 2 cut(s) 826, 832
BseBI CCWGG 1 cut(s) 125
BseDI CCNNGG 8 cut(s) 100, 180, 203, 426, 483, 699, 998, 1456
BseGI GGATG 6 cut(s) 120, 226, 529, 601, 850, 1247
BseJI GATNNNNATC 2 cut(s) 826, 832
BseLI CCNNNNNNNGG 9 cut(s) 209, 504, 903, 921, 1457, 1520, 1532, 1533, 1560
BseMII CTCAG 2 cut(s) 473, 800
BseNI ACTGG 2 cut(s) 541, 1527
BseRI GAGGAG 4 cut(s) 31, 323, 719, 722
BseSI GKGCMC 1 cut(s) 1527
BseXI GCAGC 1 cut(s) 128
BseYI CCCAGC 1 cut(s) 111
Bsh1236I CGCG 4 cut(s) 102, 156, 1453, 1576
BshFI GGCC 7 cut(s) 165, 195, 425, 1461, 1513, 1525, 1564
BsiHKAI GWGCWC 1 cut(s) 70
BsiSI CCGG 7 cut(s) 449, 819, 922, 1425, 1510, 1518, 1569
BslFI GGGAC 2 cut(s) 898, 1036
BslI CCNNNNNNNGG 9 cut(s) 209, 504, 903, 921, 1457, 1520, 1532, 1533, 1560
BsmAI GTCTC 4 cut(s) 462, 930, 1085, 1536
BsmBI CGTCTC 1 cut(s) 1085
BsmFI GGGAC 2 cut(s) 898, 1036
BsmI GAATGC 1 cut(s) 1476
BsnI GGCC 7 cut(s) 165, 195, 425, 1461, 1513, 1525, 1564
Bso31I GGTCTC 3 cut(s) 462, 930, 1536
Bsp120I GGGCCC 1 cut(s) 1523
Bsp1286I GDGCHC 2 cut(s) 70, 1527
Bsp143I GATC 7 cut(s) 106, 184, 729, 739, 821, 827, 1056
Bsp68I TCGCGA 1 cut(s) 1576
BspANI GGCC 7 cut(s) 165, 195, 425, 1461, 1513, 1525, 1564
BspCNI CTCAG 2 cut(s) 472, 799
BspFNI CGCG 4 cut(s) 102, 156, 1453, 1576
BspLI GGNNCC 6 cut(s) 136, 914, 1058, 1118, 1525, 1538
BspOI GCTAGC 1 cut(s) 1052
BspPI GGATC 6 cut(s) 101, 192, 734, 829, 1051, 1064
BspTNI GGTCTC 3 cut(s) 462, 930, 1536
BsrBI CCGCTC 1 cut(s) 56
BsrFI RCCGGY 1 cut(s) 1509
BsrI ACTGG 2 cut(s) 541, 1527
BssAI RCCGGY 1 cut(s) 1509
BssECI CCNNGG 8 cut(s) 100, 180, 203, 426, 483, 699, 998, 1456
BssMI GATC 7 cut(s) 106, 184, 729, 739, 821, 827, 1056
BssNI GRCGYC 3 cut(s) 51, 537, 847
BssT1I CCWWGG 5 cut(s) 203, 426, 483, 699, 998
Bst2UI CCWGG 1 cut(s) 125
Bst4CI ACNGT 2 cut(s) 1027, 1079
Bst6I CTCTTC 3 cut(s) 300, 309, 318
BstACI GRCGYC 3 cut(s) 51, 537, 847
BstBAI YACGTR 1 cut(s) 406
BstC8I GCNNGC 5 cut(s) 58, 249, 1050, 1451, 1511
BstDEI CTNAG 3 cut(s) 459, 786, 1123
BstDSI CCRYGG 1 cut(s) 100
BstF5I GGATG 6 cut(s) 120, 226, 529, 601, 850, 1247
BstFNI CGCG 4 cut(s) 102, 156, 1453, 1576
BstHHI GCGC 2 cut(s) 253, 1455
BstKTI GATC 7 cut(s) 109, 187, 732, 742, 824, 830, 1059
BstMAI GTCTC 4 cut(s) 462, 930, 1085, 1536
BstMBI GATC 7 cut(s) 106, 184, 729, 739, 821, 827, 1056
BstMWI GCNNNNNNNGC 5 cut(s) 141, 153, 162, 443, 1582
BstNI CCWGG 1 cut(s) 125
BstSCI CCNGG 5 cut(s) 123, 817, 920, 1424, 1568
BstSFI CTRYAG 1 cut(s) 1084
BstSLI GKGCMC 1 cut(s) 1527
BstUI CGCG 4 cut(s) 102, 156, 1453, 1576
BstV1I GCAGC 1 cut(s) 128
BstV2I GAAGAC 1 cut(s) 567
BstX2I RGATCY 2 cut(s) 821, 1056
BstYI RGATCY 2 cut(s) 821, 1056
BsuRI GGCC 7 cut(s) 165, 195, 425, 1461, 1513, 1525, 1564
BtgI CCRYGG 1 cut(s) 100
BtrI CACGTC 1 cut(s) 77
BtsCI GGATG 6 cut(s) 120, 226, 529, 601, 850, 1247
BtsI GCAGTG 1 cut(s) 625
BtsIMutI CAGTG 1 cut(s) 625
BtuMI TCGCGA 1 cut(s) 1576
Cac8I GCNNGC 5 cut(s) 58, 249, 1050, 1451, 1511
CaiI CAGNNNCTG 1 cut(s) 554
CfoI GCGC 2 cut(s) 253, 1455
Cfr10I RCCGGY 1 cut(s) 1509
Cfr13I GGNCC 8 cut(s) 912, 1116, 1326, 1523, 1524, 1537, 1563, 1580
Cfr42I CCGCGG 1 cut(s) 103
CseI GACGC 3 cut(s) 59, 545, 836
CviAII CATG 3 cut(s) 43, 685, 1130
DdeI CTNAG 3 cut(s) 459, 786, 1123
DpnI GATC 7 cut(s) 108, 186, 731, 741, 823, 829, 1058
DpnII GATC 7 cut(s) 106, 184, 729, 739, 821, 827, 1056
Eam1104I CTCTTC 3 cut(s) 300, 309, 318
EarI CTCTTC 3 cut(s) 300, 309, 318
EciI GGCGGA 1 cut(s) 1496
Ecl136II GAGCTC 1 cut(s) 68
Eco130I CCWWGG 5 cut(s) 203, 426, 483, 699, 998
Eco147I AGGCCT 1 cut(s) 195
Eco24I GRGCYC 2 cut(s) 70, 1527
Eco31I GGTCTC 3 cut(s) 462, 930, 1536
Eco47I GGWCC 5 cut(s) 912, 1116, 1326, 1537, 1580
Eco53kI GAGCTC 1 cut(s) 68
Eco72I CACGTG 1 cut(s) 406
EcoICRI GAGCTC 1 cut(s) 68
EcoO109I RGGNCCY 2 cut(s) 912, 1563
EcoRI GAATTC 1 cut(s) 1443
EcoRII CCWGG 1 cut(s) 123
EcoT14I CCWWGG 5 cut(s) 203, 426, 483, 699, 998
EcoT38I GRGCYC 2 cut(s) 70, 1527
ErhI CCWWGG 5 cut(s) 203, 426, 483, 699, 998
Esp3I CGTCTC 1 cut(s) 1085
FaeI CATG 3 cut(s) 46, 688, 1133
FaqI GGGAC 2 cut(s) 898, 1036
FatI CATG 3 cut(s) 42, 684, 1129
FauI CCCGC 3 cut(s) 146, 1458, 1489
FbaI TGATCA 1 cut(s) 729
FblI GTMKAC 2 cut(s) 681, 1234
Fnu4HI GCNGC 6 cut(s) 54, 100, 103, 142, 145, 464
FokI GGATG 6 cut(s) 107, 233, 536, 608, 837, 1234
FriOI GRGCYC 2 cut(s) 70, 1527
Fsp4HI GCNGC 6 cut(s) 54, 100, 103, 142, 145, 464
FspBI CTAG 5 cut(s) 903, 999, 1049, 1254, 1319
GlaI GCGC 2 cut(s) 252, 1454
GluI GCNGC 6 cut(s) 54, 100, 103, 142, 145, 464
GsaI CCCAGC 1 cut(s) 115
GsuI CTGGAG 2 cut(s) 840, 922
HaeIII GGCC 7 cut(s) 165, 195, 425, 1461, 1513, 1525, 1564
HapII CCGG 7 cut(s) 449, 819, 922, 1425, 1510, 1518, 1569
HgaI GACGC 3 cut(s) 59, 545, 836
HhaI GCGC 2 cut(s) 253, 1455
Hin1I GRCGYC 3 cut(s) 51, 537, 847
Hin1II CATG 3 cut(s) 46, 688, 1133
Hin6I GCGC 2 cut(s) 251, 1453
HinP1I GCGC 2 cut(s) 251, 1453
HindIII AAGCTT 1 cut(s) 471
HinfI GANTC 7 cut(s) 199, 272, 409, 657, 760, 946, 1133
HpaII CCGG 7 cut(s) 449, 819, 922, 1425, 1510, 1518, 1569
HphI GGTGA 2 cut(s) 822, 1366
Hpy166II GTNNAC 3 cut(s) 37, 682, 1235
Hpy8I GTNNAC 3 cut(s) 37, 682, 1235
Hpy99I CGWCG 6 cut(s) 78, 134, 161, 164, 372, 888
HpyAV CCTTC 4 cut(s) 620, 768, 772, 1524
HpyCH4III ACNGT 2 cut(s) 1027, 1079
HpyCH4IV ACGT 2 cut(s) 76, 405
HpyCH4V TGCA 3 cut(s) 446, 746, 1247
HpyF10VI GCNNNNNNNGC 5 cut(s) 141, 153, 162, 443, 1582
HpyF3I CTNAG 3 cut(s) 459, 786, 1123
HpySE526I ACGT 2 cut(s) 76, 405
Hsp92I GRCGYC 3 cut(s) 51, 537, 847
Hsp92II CATG 3 cut(s) 46, 688, 1133
HspAI GCGC 2 cut(s) 251, 1453
KroI GCCGGC 1 cut(s) 1509
KroNI GCCGGC 1 cut(s) 1511
Ksp22I TGATCA 1 cut(s) 729
KspI CCGCGG 1 cut(s) 103
Kzo9I GATC 7 cut(s) 106, 184, 729, 739, 821, 827, 1056
LmnI GCTCC 2 cut(s) 140, 442
Lsp1109I GCAGC 1 cut(s) 128
LweI GCATC 3 cut(s) 373, 541, 1256
MaeI CTAG 5 cut(s) 903, 999, 1049, 1254, 1319
MaeII ACGT 2 cut(s) 76, 405
MaeIII GTNAC 1 cut(s) 430
MalI GATC 7 cut(s) 108, 186, 731, 741, 823, 829, 1058
MbiI CCGCTC 1 cut(s) 56
MboI GATC 7 cut(s) 106, 184, 729, 739, 821, 827, 1056
MboII GAAGA 7 cut(s) 317, 326, 335, 572, 599, 766, 1396
MfeI CAATTG 1 cut(s) 1179
MflI RGATCY 2 cut(s) 821, 1056
MhlI GDGCHC 2 cut(s) 70, 1527
MluCI AATT 9 cut(s) 228, 334, 357, 650, 747, 1070, 1179, 1349, 1443
MlyI GAGTC 2 cut(s) 281, 769
MmeI TCCRAC 2 cut(s) 282, 1574
MroNI GCCGGC 1 cut(s) 1509
MseI TTAA 6 cut(s) 227, 333, 356, 360, 1227, 1266
MslI CAYNNNNRTG 1 cut(s) 285
MspA1I CMGCKG 3 cut(s) 102, 141, 860
MspI CCGG 7 cut(s) 449, 819, 922, 1425, 1510, 1518, 1569
MspR9I CCNGG 5 cut(s) 125, 819, 922, 1426, 1570
MunI CAATTG 1 cut(s) 1179
Mva1269I GAATGC 1 cut(s) 1476
MvaI CCWGG 1 cut(s) 125
MvnI CGCG 4 cut(s) 102, 156, 1453, 1576
MwoI GCNNNNNNNGC 5 cut(s) 141, 153, 162, 443, 1582
NaeI GCCGGC 1 cut(s) 1511
NciI CCSGG 4 cut(s) 819, 922, 1426, 1570
NdeII GATC 7 cut(s) 106, 184, 729, 739, 821, 827, 1056
NgoMIV GCCGGC 1 cut(s) 1509
NheI GCTAGC 1 cut(s) 1048
NlaIII CATG 3 cut(s) 46, 688, 1133
NlaIV GGNNCC 6 cut(s) 136, 914, 1058, 1118, 1525, 1538
NmeAIII GCCGAG 2 cut(s) 1481, 1487
NruI TCGCGA 1 cut(s) 1576
PacI TTAATTAA 1 cut(s) 360
PceI AGGCCT 1 cut(s) 195
PcsI WCGNNNNNNNCGW 4 cut(s) 70, 576, 1453, 1537
PctI GAATGC 1 cut(s) 1476
PdiI GCCGGC 1 cut(s) 1511
PfeI GAWTC 5 cut(s) 199, 409, 657, 946, 1133
PkrI GCNGC 6 cut(s) 55, 101, 104, 143, 146, 465
PleI GAGTC 2 cut(s) 280, 768
PmaCI CACGTG 1 cut(s) 406
PmlI CACGTG 1 cut(s) 406
PpsI GAGTC 2 cut(s) 280, 768
Ppu21I YACGTR 1 cut(s) 406
PpuMI RGGWCCY 1 cut(s) 912
PshBI ATTAAT 1 cut(s) 1227
PsiI TTATAA 1 cut(s) 1205
Psp124BI GAGCTC 1 cut(s) 70
Psp5II RGGWCCY 1 cut(s) 912
Psp6I CCWGG 1 cut(s) 123
PspCI CACGTG 1 cut(s) 406
PspFI CCCAGC 1 cut(s) 111
PspGI CCWGG 1 cut(s) 123
PspN4I GGNNCC 6 cut(s) 136, 914, 1058, 1118, 1525, 1538
PspOMI GGGCCC 1 cut(s) 1523
PspPI GGNCC 8 cut(s) 912, 1116, 1326, 1523, 1524, 1537, 1563, 1580
PspPPI RGGWCCY 1 cut(s) 912
PsrI GAACNNNNNNTAC 2 cut(s) 1294, 1326
PstNI CAGNNNCTG 1 cut(s) 554
PsuI RGATCY 2 cut(s) 821, 1056
PvuII CAGCTG 1 cut(s) 860
RruI TCGCGA 1 cut(s) 1576
RseI CAYNNNNRTG 1 cut(s) 285
SacI GAGCTC 1 cut(s) 70
SacII CCGCGG 1 cut(s) 103
SaqAI TTAA 6 cut(s) 227, 333, 356, 360, 1227, 1266
SatI GCNGC 6 cut(s) 54, 100, 103, 142, 145, 464
Sau3AI GATC 7 cut(s) 106, 184, 729, 739, 821, 827, 1056
Sau96I GGNCC 8 cut(s) 912, 1116, 1326, 1523, 1524, 1537, 1563, 1580
SchI GAGTC 2 cut(s) 281, 769
ScrFI CCNGG 5 cut(s) 125, 819, 922, 1426, 1570
SduI GDGCHC 2 cut(s) 70, 1527
SfaNI GCATC 3 cut(s) 373, 541, 1256
SfcI CTRYAG 1 cut(s) 1084
Sfr303I CCGCGG 1 cut(s) 103
SgrBI CCGCGG 1 cut(s) 103
SinI GGWCC 5 cut(s) 912, 1116, 1326, 1537, 1580
SmiMI CAYNNNNRTG 1 cut(s) 285
SmlI CTYRAG 1 cut(s) 841
SmoI CTYRAG 1 cut(s) 841
Sse9I AATT 9 cut(s) 228, 334, 357, 650, 747, 1070, 1179, 1349, 1443
SseBI AGGCCT 1 cut(s) 195
SspI AATATT 1 cut(s) 1201
SspMI CTAG 5 cut(s) 903, 999, 1049, 1254, 1319
SstI GAGCTC 1 cut(s) 70
StuI AGGCCT 1 cut(s) 195
StyD4I CCNGG 5 cut(s) 123, 817, 920, 1424, 1568
StyI CCWWGG 5 cut(s) 203, 426, 483, 699, 998
TaaI ACNGT 2 cut(s) 1027, 1079
TaiI ACGT 2 cut(s) 79, 408
TaqI TCGA 3 cut(s) 258, 268, 826
TasI AATT 9 cut(s) 228, 334, 357, 650, 747, 1070, 1179, 1349, 1443
TauI GCSGC 5 cut(s) 56, 102, 105, 147, 466
TfiI GAWTC 5 cut(s) 199, 409, 657, 946, 1133
Tru1I TTAA 6 cut(s) 227, 333, 356, 360, 1227, 1266
Tru9I TTAA 6 cut(s) 227, 333, 356, 360, 1227, 1266
TscAI CASTG 1 cut(s) 625
TseI GCWGC 1 cut(s) 141
TspDTI ATGAA 3 cut(s) 573, 639, 1372
TspRI CASTG 1 cut(s) 625
VpaK11BI GGWCC 5 cut(s) 912, 1116, 1326, 1537, 1580
VspI ATTAAT 1 cut(s) 1227
XapI RAATTY 3 cut(s) 650, 1070, 1443
XbaI TCTAGA 1 cut(s) 1318
XmaJI CCTAGG 1 cut(s) 998
XmiI GTMKAC 2 cut(s) 681, 1234
XspI CTAG 5 cut(s) 903, 999, 1049, 1254, 1319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.