Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001386.1

Orthogroup ID

OG0006908

Physical Location & Seq

Genomic Coordinates Forward (+)

1209 .. 5714

Gene Structure 4506 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001386.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2913 bp

atgctaactttctcttcatcttacttgtcattcgatacatattatgtctctctttcattctctacggccattgctatttctggttctctgcgaatgagaactttcaaaatccccaccatttttacttctaaaagccacccgaggcttccttaccaaaaccccattcgccaaaatctagtagacaagcctgaaagccagaatggctccaacagggtgtttagattcttgcgcgggcttatgtccggagggaaaattgatggggggtcgaggacagaggcagaggagaagctttactcttggttatacgccttggcgcaatccgataaggatttggttttcgagtatgttcgatccaccgaaagaggattgagctttactgaagctgaaaggagattgaaggaaaatggcccgaatgttcctgttgatttctcttttcctagctggtggcattttttatggagtgctttctttcatccttttaatatcatattgatcgtcctgtctgtaatctcgtacataaccagtgacagcccaaatggatgcatcatgcttgttttggttttgataagtgtttgcctccggttctatcaggaatacggaagttcaaaagcagccatggaactttcagaatttgtaaggtgcccagtcaaagttcaaagatgtgcaggtagagttgttcagactgaattagtagtacaaattgatcaaagagatattgttcctggtgatattatcatatttgaacctggagacctttttcctggagatgtgagactattgtcttcgaaacaccttgttgtaagtcaggcctcattaacaggagagtcctggacaaccgaaaaaacagctgatatcagagagaatcaaagcactccattgctagatttaaggaatatttgcttcatgggaacaaatgtagtatcaggcagtggatctggtctagtggtttccactggatctaagacatacatgagcaccatgttttcaaacatagggaagaagaaaccaccaaatgaatttgaggacggtgttcgtcgcatatcttatgtgctggttgctgttatgctagtagtagtcaccatcatagttataactgactactctacatctcttgatctgtctgagagcatcctttttggagtgtcagttgcaagtgcacttactcctcaaatgcttcccctggtcgttaacacaagtcttgcaaaaggagcacttgctatggccagagacagatgcataatcaaaagcttgtctgcaatacgaaacatgggttctatggatatcttatgcattgacaagactggtacactcacaatgaatcgtgcgataatggttaattatctggacagctgggggttagacaaagaaaaggttttacagtttgctttcctcaactcatatttcaagaccgatcagaaatatcctttggatgatgcaattttggcacatgtatataccaatggattcaggttccaaccgtcaaaatggaagaaactagatgagattccttttgatttcataagaagaagggtatctattatcatggaaagagaagaagacacagaccctcacagttttgtgagagtcatggtgacaaaaggagctctggaagaagtaatgaaagtttgttcttgtatggagaatgttgacagtggcacgatttcacctctctctccagaacagtatcaaaggattataaatatgaccgaggaaataagcaatgagggactaagagttataggagtagcaacaaagaagctgggaaagataaggtatgagcgcaaagataatgatgatacttctgaatcagacatggttttcctcggcctcattacattcttcgacccacccaaggactcagcaaagcaagctctgtggcggttggctgagaagggagtgaaagcaaaagtattaacaggtgactcactgtctctatctataagagtttgcaaggaagttggtatcagaacaactcatgtagttacggggccagagcttgagctactcgaccaggatgcctttcatgagactgttaaaacagcaacggtcttagctcgactcaccccaacacagaaactccgagttgtgcaatccttgcaaacaattggtaaccacattgttggatttttgggagatggagtaaatgactcacttgcactggatgcagcccatgttggtatatcagttgattcaggagcatcagttgcaaaagactttgctgacattatcttactggagaaagacctgaatgtactcattgccggagttgaacacggccgactcacttttgggaacacaatgaagtacataaaaatgtcagttatagccaatctgggaagcgttctctcaattctcatagcaaccctggtgctcaagtatgagccattgacggcaaggcagcttcttacacagaacttcttgtatagtgtgggccagattgcaatcccatgggataaaatggaagatgattatgtaaaagtcccacaaagatggtcaaagaaaggtttgccgacgttcattttgtggaatggacctgtctgcactctttttgatgttactacacttctgttcctttggttctattataaggctgacaatctggaggatcttgttttcttccacactgcttggttcatcgaagggcttctcatgcagaccctaatcatccacttgatccgtacagagaaaattcctttcattcaggagtttgcctcatggcctgtgctttgttctacagttctggtttctgcaattggaatcgcaattacattcaccccgattgggaaagtgatgggatttatcaggcttccagtgtcatactttgggtttttggtagtactgtttataggatattttgttgttggccaggtggtcaagagactctacattttggtttataaaacctggctttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0015075 GO:0015318 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0090662 GO:0098655 GO:0098660 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

970

Amino Acids

108.76

Weight (kDa)

7.52

Isoelectric Point (pI)

34.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006908)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20140 FvH4_1g20140 FvH4_1g20140 FvH4_1g20140 FvH4_1g20140 FvH4_1g20140
malus_domestica	MD00G1145700.v1.1 MD15G1317200.v1.1
prunus_persica	Prupe.6G194600_v2.0.a1 Prupe.6G194600_v2.0.a1 Prupe.6G194600_v2.0.a1 Prupe.6G194600_v2.0.a1
pyrus_communis	pycom01g06410
rosa_chinensis	RchiOBHm_Chr2g0112191
rosa_laevigata	RLG00000017957
rosa_multiflora	Rmu_sc0001386.1_g000001 Rmu_sc0026641.1_g000001
rosa_roxburghii	Rroxscaffold_2G00131700
rosa_rugosa	Rorug02G0179000 Rorug02G0179000 Rorug02G0179100
rosa_samantha	Rh2AG231200 Rh2BG244200 Rh2CG235600 Rh2DG239100
rosa_wichuraiana	Rw2G017920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	1091, 1697, 2586, 2898
Acc36I	ACCTGC	1 cut(s)	656
AccB1I	GGYRCC	1 cut(s)	639
AccI	GTMKAC	1 cut(s)	180
AccII	CGCG	1 cut(s)	231
AccIII	TCCGGA	1 cut(s)	242
AciI	CCGC	2 cut(s)	231, 1879
AclWI	GGATC	5 cut(s)	345, 940, 964, 2613, 2668
AcoI	YGGCCR	4 cut(s)	66, 1221, 2275, 2863
AcsI	RAATTY	3 cut(s)	629, 1016, 2688
AcuI	CTGAAG	1 cut(s)	399
AfaI	GTAC	7 cut(s)	515, 696, 1306, 2253, 2306, 2680, 2838
AfiI	CCNNNNNNNGG	2 cut(s)	1852, 2781
AflIII	ACRYGT	1 cut(s)	1447
AgsI	TTSAA	8 cut(s)	106, 397, 606, 656, 743, 987, 1405, 2270
AhdI	GACNNNNNGTC	1 cut(s)	1927
AjnI	CCWGG	9 cut(s)	721, 745, 760, 827, 1179, 2010, 2364, 2865, 2903
AjuI	GAANNNNNNNTTGG	4 cut(s)	147, 179, 1409, 1441
Alw21I	GWGCWC	5 cut(s)	977, 1159, 1213, 1606, 2373
Alw26I	GTCTC	7 cut(s)	52, 744, 766, 1221, 1935, 2021, 2872
Alw44I	GTGCAC	1 cut(s)	1155
AlwI	GGATC	5 cut(s)	345, 940, 964, 2613, 2668
Ama87I	CYCGRG	1 cut(s)	139
Aor13HI	TCCGGA	1 cut(s)	242
ApaLI	GTGCAC	1 cut(s)	1155
ApeKI	GCWGC	3 cut(s)	611, 2165, 2398
ApoI	RAATTY	3 cut(s)	629, 1016, 2688
ArsI	GACNNNNNNTTYG	2 cut(s)	2503, 2535
Asp700I	GAANNNNTTC	1 cut(s)	2643
AspLEI	GCGC	3 cut(s)	231, 316, 1782
AspS9I	GGNCC	4 cut(s)	407, 1988, 2431, 2531
AsuHPI	GGTGA	7 cut(s)	737, 1069, 1603, 1656, 1931, 2053, 2764
AsuII	TTCGAA	1 cut(s)	785
AvaI	CYCGRG	1 cut(s)	139
AvaII	GGWCC	1 cut(s)	2531
BaeGI	GKGCMC	2 cut(s)	644, 1159
BalI	TGGCCA	2 cut(s)	1223, 2865
BanI	GGYRCC	1 cut(s)	639
BanII	GRGCYC	1 cut(s)	1606
BbsI	GAAGAC	2 cut(s)	774, 1563
Bbv12I	GWGCWC	5 cut(s)	977, 1159, 1213, 1606, 2373
BbvI	GCAGC	3 cut(s)	623, 2177, 2410
BccI	CCATC	5 cut(s)	251, 1088, 2129, 2484, 2785
BceAI	ACGGC	3 cut(s)	81, 2290, 2406
BcgI	CGANNNNNNTGC	2 cut(s)	1997, 2031
BciT130I	CCWGG	9 cut(s)	723, 747, 762, 829, 1181, 2012, 2366, 2867, 2905
BclI	TGATCA	1 cut(s)	703
BcoDI	GTCTC	7 cut(s)	52, 744, 766, 1221, 1935, 2021, 2872
BfaI	CTAG	6 cut(s)	176, 438, 881, 941, 1067, 1496
BfmI	CTRYAG	1 cut(s)	2733
BfuAI	ACCTGC	1 cut(s)	656
BglI	GCCNNNNNGGC	1 cut(s)	201
BisI	GCNGC	3 cut(s)	612, 2166, 2399
BlsI	GCNGC	3 cut(s)	613, 2167, 2400
BmcAI	AGTACT	1 cut(s)	2838
Bme1390I	CCNGG	9 cut(s)	723, 747, 762, 829, 1181, 2012, 2366, 2867, 2905
Bme18I	GGWCC	1 cut(s)	2531
BmeRI	GACNNNNNGTC	1 cut(s)	1927
BmeT110I	CYCGRG	1 cut(s)	139
BmgT120I	GGNCC	4 cut(s)	407, 1988, 2431, 2531
BmiI	GGNNCC	4 cut(s)	205, 641, 1472, 1989
BmrFI	CCNGG	9 cut(s)	723, 747, 762, 829, 1181, 2012, 2366, 2867, 2905
BmrI	ACTGGG	1 cut(s)	638
BmsI	GCATC	8 cut(s)	530, 552, 1137, 1223, 1423, 2005, 2152, 2207
BmuI	ACTGGG	1 cut(s)	638
BoxI	GACNNNNGTC	1 cut(s)	778
BpiI	GAAGAC	2 cut(s)	774, 1563
BplI	GAGNNNNNCTC	2 cut(s)	2696, 2728
BpmI	CTGGAG	5 cut(s)	768, 783, 1659, 2255, 2621
Bpu14I	TTCGAA	1 cut(s)	785
BpuEI	CTTGAG	2 cut(s)	2018, 2357
BsaBI	GATNNNNATC	1 cut(s)	2441
BsaI	GGTCTC	1 cut(s)	744
BsaJI	CCNNGG	9 cut(s)	140, 309, 615, 1179, 1707, 1822, 1851, 2364, 2447
BsaWI	WCCGGW	2 cut(s)	242, 579
BsaXI	ACNNNNNCTCC	8 cut(s)	1131, 1161, 2061, 2091, 2124, 2154, 2187, 2217
Bsc4I	CCNNNNNNNGG	2 cut(s)	1852, 2781
Bse1I	ACTGG	7 cut(s)	522, 644, 958, 1306, 2163, 2238, 2810
Bse3DI	GCAATG	4 cut(s)	69, 875, 1726, 2256
Bse8I	GATNNNNATC	1 cut(s)	2441
BseAI	TCCGGA	1 cut(s)	242
BseBI	CCWGG	9 cut(s)	723, 747, 762, 829, 1181, 2012, 2366, 2867, 2905
BseDI	CCNNGG	9 cut(s)	140, 309, 615, 1179, 1707, 1822, 1851, 2364, 2447
BseGI	GGATG	7 cut(s)	472, 545, 1128, 1435, 2020, 2167, 2664
BseJI	GATNNNNATC	1 cut(s)	2441
BseLI	CCNNNNNNNGG	2 cut(s)	1852, 2781
BseMI	GCAATG	4 cut(s)	69, 875, 1726, 2256
BseMII	CTCAG	3 cut(s)	1113, 1872, 1878
BseNI	ACTGG	7 cut(s)	522, 644, 958, 1306, 2163, 2238, 2810
BseRI	GAGGAG	2 cut(s)	296, 1155
BseSI	GKGCMC	2 cut(s)	644, 1159
BseX3I	CGGCCG	1 cut(s)	2275
BseXI	GCAGC	3 cut(s)	623, 2177, 2410
BseYI	CCCAGC	2 cut(s)	1350, 1759
BsgI	GTGCAG	2 cut(s)	684, 2524
Bsh1236I	CGCG	1 cut(s)	231
Bsh1285I	CGRYCG	1 cut(s)	2278
BshNI	GGYRCC	1 cut(s)	639
BsiEI	CGRYCG	1 cut(s)	2278
BsiHKAI	GWGCWC	5 cut(s)	977, 1159, 1213, 1606, 2373
BsiHKCI	CYCGRG	1 cut(s)	139
BsiSI	CCGG	3 cut(s)	243, 580, 2262
BslFI	GGGAC	2 cut(s)	1740, 2465
BslI	CCNNNNNNNGG	2 cut(s)	1852, 2781
BsmAI	GTCTC	7 cut(s)	52, 744, 766, 1221, 1935, 2021, 2872
BsmFI	GGGAC	2 cut(s)	1740, 2465
Bso31I	GGTCTC	1 cut(s)	744
BsoBI	CYCGRG	1 cut(s)	139
Bsp119I	TTCGAA	1 cut(s)	785
Bsp1286I	GDGCHC	6 cut(s)	644, 977, 1159, 1213, 1606, 2373
Bsp13I	TCCGGA	1 cut(s)	242
Bsp143I	GATC	9 cut(s)	350, 492, 703, 932, 956, 1114, 1411, 2605, 2673
Bsp19I	CCATGG	2 cut(s)	615, 2447
BspACI	CCGC	2 cut(s)	231, 1879
BspCNI	CTCAG	3 cut(s)	1114, 1871, 1879
BspEI	TCCGGA	1 cut(s)	242
BspFNI	CGCG	1 cut(s)	231
BspHI	TCATGA	1 cut(s)	2023
BspLI	GGNNCC	4 cut(s)	205, 641, 1472, 1989
BspMI	ACCTGC	1 cut(s)	656
BspPI	GGATC	5 cut(s)	345, 940, 964, 2613, 2668
BspT104I	TTCGAA	1 cut(s)	785
BspT107I	GGYRCC	1 cut(s)	639
BspTNI	GGTCTC	1 cut(s)	744
BsrDI	GCAATG	4 cut(s)	69, 875, 1726, 2256
BsrI	ACTGG	7 cut(s)	522, 644, 958, 1306, 2163, 2238, 2810
BssECI	CCNNGG	9 cut(s)	140, 309, 615, 1179, 1707, 1822, 1851, 2364, 2447
BssMI	GATC	9 cut(s)	350, 492, 703, 932, 956, 1114, 1411, 2605, 2673
BssT1I	CCWWGG	4 cut(s)	309, 615, 1851, 2447
Bst2UI	CCWGG	9 cut(s)	723, 747, 762, 829, 1181, 2012, 2366, 2867, 2905
Bst6I	CTCTTC	1 cut(s)	19
BstAPI	GCANNNNNTGC	3 cut(s)	2095, 2162, 2204
BstBI	TTCGAA	1 cut(s)	785
BstC8I	GCNNGC	2 cut(s)	233, 1869
BstDEI	CTNAG	6 cut(s)	960, 1122, 1730, 1858, 1887, 2050
BstDSI	CCRYGG	2 cut(s)	615, 2447
BstEII	GGTNACC	1 cut(s)	2108
BstF5I	GGATG	7 cut(s)	472, 545, 1128, 1435, 2020, 2167, 2664
BstFNI	CGCG	1 cut(s)	231
BstHHI	GCGC	3 cut(s)	231, 316, 1782
BstKTI	GATC	9 cut(s)	353, 495, 706, 935, 959, 1117, 1414, 2608, 2676
BstMAI	GTCTC	7 cut(s)	52, 744, 766, 1221, 1935, 2021, 2872
BstMBI	GATC	9 cut(s)	350, 492, 703, 932, 956, 1114, 1411, 2605, 2673
BstMCI	CGRYCG	1 cut(s)	2278
BstMWI	GCNNNNNNNGC	8 cut(s)	201, 1208, 1442, 1868, 2095, 2162, 2204, 2650
BstNI	CCWGG	9 cut(s)	723, 747, 762, 829, 1181, 2012, 2366, 2867, 2905
BstNSI	RCATGY	1 cut(s)	1451
BstPAI	GACNNNNGTC	1 cut(s)	778
BstPI	GGTNACC	1 cut(s)	2108
BstSCI	CCNGG	9 cut(s)	721, 745, 760, 827, 1179, 2010, 2364, 2865, 2903
BstSFI	CTRYAG	1 cut(s)	2733
BstSLI	GKGCMC	2 cut(s)	644, 1159
BstUI	CGCG	1 cut(s)	231
BstV1I	GCAGC	3 cut(s)	623, 2177, 2410
BstV2I	GAAGAC	2 cut(s)	774, 1563
BstX2I	RGATCY	3 cut(s)	932, 956, 2605
BstXI	CCANNNNNNTGG	2 cut(s)	2120, 2490
BstYI	RGATCY	3 cut(s)	932, 956, 2605
BstZI	CGGCCG	1 cut(s)	2275
BtgI	CCRYGG	2 cut(s)	615, 2447
BtsCI	GGATG	7 cut(s)	472, 545, 1128, 1435, 2020, 2167, 2664
BtsI	GCAGTG	2 cut(s)	934, 2622
BtsIMutI	CAGTG	8 cut(s)	529, 934, 951, 1657, 1925, 2156, 2622, 2817
BveI	ACCTGC	1 cut(s)	656
Cac8I	GCNNGC	2 cut(s)	233, 1869
CciI	TCATGA	1 cut(s)	2023
CfoI	GCGC	3 cut(s)	231, 316, 1782
Cfr13I	GGNCC	4 cut(s)	407, 1988, 2431, 2531
Csp6I	GTAC	7 cut(s)	514, 695, 1305, 2252, 2305, 2679, 2837
CspCI	CAANNNNNGTGG	4 cut(s)	1856, 1891, 2609, 2644
CviQI	GTAC	7 cut(s)	514, 695, 1305, 2252, 2305, 2679, 2837
DdeI	CTNAG	6 cut(s)	960, 1122, 1730, 1858, 1887, 2050
DpnI	GATC	9 cut(s)	352, 494, 705, 934, 958, 1116, 1413, 2607, 2675
DpnII	GATC	9 cut(s)	350, 492, 703, 932, 956, 1114, 1411, 2605, 2673
DriI	GACNNNNNGTC	1 cut(s)	1927
EaeI	YGGCCR	4 cut(s)	66, 1221, 2275, 2863
EagI	CGGCCG	1 cut(s)	2275
Eam1104I	CTCTTC	1 cut(s)	19
Eam1105I	GACNNNNNGTC	1 cut(s)	1927
EarI	CTCTTC	1 cut(s)	19
Ecl136II	GAGCTC	1 cut(s)	1604
EclXI	CGGCCG	1 cut(s)	2275
Eco130I	CCWWGG	4 cut(s)	309, 615, 1851, 2447
Eco147I	AGGCCT	1 cut(s)	809
Eco24I	GRGCYC	1 cut(s)	1606
Eco31I	GGTCTC	1 cut(s)	744
Eco32I	GATATC	2 cut(s)	853, 1282
Eco47I	GGWCC	1 cut(s)	2531
Eco52I	CGGCCG	1 cut(s)	2275
Eco53kI	GAGCTC	1 cut(s)	1604
Eco57I	CTGAAG	1 cut(s)	399
Eco88I	CYCGRG	1 cut(s)	139
Eco91I	GGTNACC	1 cut(s)	2108
EcoICRI	GAGCTC	1 cut(s)	1604
EcoO65I	GGTNACC	1 cut(s)	2108
EcoRII	CCWGG	9 cut(s)	721, 745, 760, 827, 1179, 2010, 2364, 2865, 2903
EcoRV	GATATC	2 cut(s)	853, 1282
EcoT14I	CCWWGG	4 cut(s)	309, 615, 1851, 2447
EcoT22I	ATGCAT	3 cut(s)	545, 1238, 1292
EcoT38I	GRGCYC	1 cut(s)	1606
ErhI	CCWWGG	4 cut(s)	309, 615, 1851, 2447
FalI	AAGNNNNNCTT	2 cut(s)	1197, 1229
FaqI	GGGAC	2 cut(s)	1740, 2465
FauI	CCCGC	1 cut(s)	224
FbaI	TGATCA	1 cut(s)	703
FblI	GTMKAC	1 cut(s)	180
Fnu4HI	GCNGC	3 cut(s)	612, 2166, 2399
FokI	GGATG	7 cut(s)	459, 552, 1115, 1442, 2027, 2174, 2651
FriOI	GRGCYC	1 cut(s)	1606
Fsp4HI	GCNGC	3 cut(s)	612, 2166, 2399
FspBI	CTAG	6 cut(s)	176, 438, 881, 941, 1067, 1496
GlaI	GCGC	3 cut(s)	230, 315, 1781
GluI	GCNGC	3 cut(s)	612, 2166, 2399
GsaI	CCCAGC	2 cut(s)	1354, 1763
GsuI	CTGGAG	5 cut(s)	768, 783, 1659, 2255, 2621
HapII	CCGG	3 cut(s)	243, 580, 2262
HhaI	GCGC	3 cut(s)	231, 316, 1782
Hin6I	GCGC	3 cut(s)	229, 314, 1780
HinP1I	GCGC	3 cut(s)	229, 314, 1780
HincII	GTYRAC	2 cut(s)	1189, 1648
HindII	GTYRAC	2 cut(s)	1189, 1648
HindIII	AAGCTT	2 cut(s)	287, 1246
HpaI	GTTAAC	1 cut(s)	1189
HpaII	CCGG	3 cut(s)	243, 580, 2262
HphI	GGTGA	7 cut(s)	737, 1069, 1603, 1656, 1931, 2053, 2764
Hpy166II	GTNNAC	5 cut(s)	181, 1157, 1189, 1307, 1648
Hpy8I	GTNNAC	5 cut(s)	181, 1157, 1189, 1307, 1648
Hpy99I	CGWCG	2 cut(s)	1038, 2515
HpyAV	CCTTC	4 cut(s)	391, 1521, 1885, 2633
HpyCH4IV	ACGT	1 cut(s)	2513
HpyF10VI	GCNNNNNNNGC	8 cut(s)	201, 1208, 1442, 1868, 2095, 2162, 2204, 2650
HpyF3I	CTNAG	6 cut(s)	960, 1122, 1730, 1858, 1887, 2050
HpySE526I	ACGT	1 cut(s)	2513
HspAI	GCGC	3 cut(s)	229, 314, 1780
Kpn2I	TCCGGA	1 cut(s)	242
Ksp22I	TGATCA	1 cut(s)	703
KspAI	GTTAAC	1 cut(s)	1189
Kzo9I	GATC	9 cut(s)	350, 492, 703, 932, 956, 1114, 1411, 2605, 2673
LmnI	GCTCC	4 cut(s)	209, 1208, 1601, 2195
Lsp1109I	GCAGC	3 cut(s)	623, 2177, 2410
LweI	GCATC	8 cut(s)	530, 552, 1137, 1223, 1423, 2005, 2152, 2207
MaeI	CTAG	6 cut(s)	176, 438, 881, 941, 1067, 1496
MaeII	ACGT	1 cut(s)	2513
MaeIII	GTNAC	7 cut(s)	524, 1075, 1591, 1919, 1981, 2108, 2554
MalI	GATC	9 cut(s)	352, 494, 705, 934, 958, 1116, 1413, 2607, 2675
MboI	GATC	9 cut(s)	350, 492, 703, 932, 956, 1114, 1411, 2605, 2673
MfeI	CAATTG	2 cut(s)	2103, 2751
MflI	RGATCY	3 cut(s)	932, 956, 2605
MhlI	GDGCHC	6 cut(s)	644, 977, 1159, 1213, 1606, 2373
MlsI	TGGCCA	2 cut(s)	1223, 2865
MluNI	TGGCCA	2 cut(s)	1223, 2865
MlyI	GAGTC	8 cut(s)	833, 1593, 1850, 1916, 2052, 2141, 2274, 2874
MmeI	TCCRAC	3 cut(s)	231, 1498, 2101
Mox20I	TGGCCA	2 cut(s)	1223, 2865
Mph1103I	ATGCAT	3 cut(s)	545, 1238, 1292
MroI	TCCGGA	1 cut(s)	242
MroXI	GAANNNNTTC	1 cut(s)	2643
MscI	TGGCCA	2 cut(s)	1223, 2865
MseI	TTAA	7 cut(s)	480, 815, 887, 1188, 1335, 1913, 2034
MslI	CAYNNNNRTG	2 cut(s)	2312, 2488
Msp20I	TGGCCA	2 cut(s)	1223, 2865
MspA1I	CMGCKG	2 cut(s)	848, 1350
MspI	CCGG	3 cut(s)	243, 580, 2262
MspR9I	CCNGG	9 cut(s)	723, 747, 762, 829, 1181, 2012, 2366, 2867, 2905
MunI	CAATTG	2 cut(s)	2103, 2751
MvaI	CCWGG	9 cut(s)	723, 747, 762, 829, 1181, 2012, 2366, 2867, 2905
MvnI	CGCG	1 cut(s)	231
MwoI	GCNNNNNNNGC	8 cut(s)	201, 1208, 1442, 1868, 2095, 2162, 2204, 2650
NcoI	CCATGG	2 cut(s)	615, 2447
NdeII	GATC	9 cut(s)	350, 492, 703, 932, 956, 1114, 1411, 2605, 2673
NlaIV	GGNNCC	4 cut(s)	205, 641, 1472, 1989
NmeAIII	GCCGAG	1 cut(s)	1803
NmuCI	GTSAC	4 cut(s)	524, 1075, 1591, 1919
NsiI	ATGCAT	3 cut(s)	545, 1238, 1292
NspI	RCATGY	1 cut(s)	1451
NspV	TTCGAA	1 cut(s)	785
PagI	TCATGA	1 cut(s)	2023
PceI	AGGCCT	1 cut(s)	809
PciI	ACATGT	1 cut(s)	1447
PdmI	GAANNNNTTC	1 cut(s)	2643
PfeI	GAWTC	8 cut(s)	222, 862, 1318, 1464, 1504, 1805, 2189, 2757
PfoI	TCCNGGA	2 cut(s)	760, 827
PkrI	GCNGC	3 cut(s)	613, 2167, 2400
PleI	GAGTC	8 cut(s)	832, 1592, 1850, 1916, 2052, 2141, 2274, 2874
PpsI	GAGTC	8 cut(s)	832, 1592, 1850, 1916, 2052, 2141, 2274, 2874
PscI	ACATGT	1 cut(s)	1447
PshAI	GACNNNNGTC	1 cut(s)	778
PsiI	TTATAA	4 cut(s)	1091, 1697, 2586, 2898
Psp124BI	GAGCTC	1 cut(s)	1606
Psp6I	CCWGG	9 cut(s)	721, 745, 760, 827, 1179, 2010, 2364, 2865, 2903
PspEI	GGTNACC	1 cut(s)	2108
PspFI	CCCAGC	2 cut(s)	1350, 1759
PspGI	CCWGG	9 cut(s)	721, 745, 760, 827, 1179, 2010, 2364, 2865, 2903
PspN4I	GGNNCC	4 cut(s)	205, 641, 1472, 1989
PspPI	GGNCC	4 cut(s)	407, 1988, 2431, 2531
PsuI	RGATCY	3 cut(s)	932, 956, 2605
PvuII	CAGCTG	2 cut(s)	848, 1350
RsaI	GTAC	7 cut(s)	515, 696, 1306, 2253, 2306, 2680, 2838
RsaNI	GTAC	7 cut(s)	514, 695, 1305, 2252, 2305, 2679, 2837
RseI	CAYNNNNRTG	2 cut(s)	2312, 2488
SacI	GAGCTC	1 cut(s)	1606
SaqAI	TTAA	7 cut(s)	480, 815, 887, 1188, 1335, 1913, 2034
SatI	GCNGC	3 cut(s)	612, 2166, 2399
Sau3AI	GATC	9 cut(s)	350, 492, 703, 932, 956, 1114, 1411, 2605, 2673
Sau96I	GGNCC	4 cut(s)	407, 1988, 2431, 2531
ScaI	AGTACT	1 cut(s)	2838
SchI	GAGTC	8 cut(s)	833, 1593, 1850, 1916, 2052, 2141, 2274, 2874
ScrFI	CCNGG	9 cut(s)	723, 747, 762, 829, 1181, 2012, 2366, 2867, 2905
SduI	GDGCHC	6 cut(s)	644, 977, 1159, 1213, 1606, 2373
SfaNI	GCATC	8 cut(s)	530, 552, 1137, 1223, 1423, 2005, 2152, 2207
SfcI	CTRYAG	1 cut(s)	2733
SfuI	TTCGAA	1 cut(s)	785
SinI	GGWCC	1 cut(s)	2531
SmiMI	CAYNNNNRTG	2 cut(s)	2312, 2488
SmlI	CTYRAG	2 cut(s)	1997, 2372
SmoI	CTYRAG	2 cut(s)	1997, 2372
SseBI	AGGCCT	1 cut(s)	809
SsiI	CCGC	2 cut(s)	231, 1879
SspI	AATATT	1 cut(s)	895
SspMI	CTAG	6 cut(s)	176, 438, 881, 941, 1067, 1496
SstI	GAGCTC	1 cut(s)	1606
StuI	AGGCCT	1 cut(s)	809
StyD4I	CCNGG	9 cut(s)	721, 745, 760, 827, 1179, 2010, 2364, 2865, 2903
StyI	CCWWGG	4 cut(s)	309, 615, 1851, 2447
TaiI	ACGT	1 cut(s)	2516
TaqI	TCGA	9 cut(s)	33, 266, 339, 349, 785, 1842, 2007, 2056, 2637
TaqII	GACCGA	2 cut(s)	1424, 1721
TatI	WGTACW	4 cut(s)	694, 2251, 2304, 2836
TfiI	GAWTC	8 cut(s)	222, 862, 1318, 1464, 1504, 1805, 2189, 2757
Tru1I	TTAA	7 cut(s)	480, 815, 887, 1188, 1335, 1913, 2034
Tru9I	TTAA	7 cut(s)	480, 815, 887, 1188, 1335, 1913, 2034
TscAI	CASTG	8 cut(s)	529, 934, 958, 1657, 1932, 2163, 2629, 2817
TseFI	GTSAC	4 cut(s)	524, 1075, 1591, 1919
TseI	GCWGC	3 cut(s)	611, 2165, 2398
Tsp45I	GTSAC	4 cut(s)	524, 1075, 1591, 1919
TspGWI	ACGGA	2 cut(s)	612, 2666
TspRI	CASTG	8 cut(s)	529, 934, 958, 1657, 1932, 2163, 2629, 2817
VneI	GTGCAC	1 cut(s)	1155
VpaK11BI	GGWCC	1 cut(s)	2531
XapI	RAATTY	3 cut(s)	629, 1016, 2688
XceI	RCATGY	1 cut(s)	1451
XmiI	GTMKAC	1 cut(s)	180
XmnI	GAANNNNTTC	1 cut(s)	2643
XspI	CTAG	6 cut(s)	176, 438, 881, 941, 1067, 1496
ZrmI	AGTACT	1 cut(s)	2838
Zsp2I	ATGCAT	3 cut(s)	545, 1238, 1292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.