Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0006908

Physical Location & Seq

Genomic Coordinates Forward (+)

22620211 .. 22624617

Gene Structure 4407 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G017920.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2820 bp

ATGAGAACTTTCAAAATCCCCACCATTTTTACTTCTAAAAGCCACCCGAGGCTTCCTTACCAAAACCCCATTCGCCAAAATCTAGTAGACAAACCTGAAAGCCAGAATGGCTCCAACAGGGTGTTTAGATTCTTGCGCGGGCTTATGTCCGGAGGGAAAATTGATGGGGGGTCGAGGACAGAAGCAGAGGAGAAGCTTTACTCTTGGTTATACGCCTTGGCGCAATCCGATAAGGATTTGGTTTTCGAGTATGTTCGATCCACCGAAAGAGGATTGAGCTTTACTGAAGCTGAAAGGAGATTGAAGGAAAATGGCCCGAATGTTCCTGTTGATTTCTCTTTTCCTAGCTGGTGGCATTTTTTATGGAGTGCTTTCTTTCATCCTTTTAATATCATATTGATCGTCCTGTCTGTAATCTCGTACATAACCAGCGATAGCCCAAATGGATGCATCATGCTTGTTTTGGTTTTGATAAGTGTTTGCCTCCGGTTCTATCAGGAATACGGAAGTTCAAAAGCAGCCATGGAACTTTCAGAATTTGTAAGGTGCCCAGTCAAAGTTCAAAGATGTGCAGGTAGAGTTGTTCAGACTGAATTAGTAGTACAAATTGATCAAAGAGATATTGTTCCTGGTGATATTATCATATTTGAACCTGGAGACCTTTTTCCTGGAGATGTGAGACTATTGTCTTCGAAACACCTTGTTGTAAGTCAGGCCTCATTAACAGGAGAGTCCTGGACAACCGAAAAAACAGCTGATATCAGAGAGAATCAAAGCACTCCATTGCTAGATTTAAGGAATATTTGCTTCATGGGAACAAATGTAGTATCAGGCAGTGGATCTGGTCTAGTGGTTTCCACTGGATCTAAGACATACATGAGCACCATGTTTTCAAACATAGGGAAGAAGAAACCACCAAATGAATTTGAGGACGGTGTTCGTCGCATATCTTATGTGCTGGTTGCTGTTATGCTAGTAGTAGTCACCATCATAGTTATAACTGACTACTCTACATCTCTTGATCTGTCTGAGAGCATCCTTTTTGGAGTGTCAGTTGCAAGTGCACTTACTCCTCAAATGCTTCCCCTGGTCGTTAACACAAGTCTTGCAAAAGGAGCACTTGCTATGGCCAGAGACAGATGCATAATCAAAAGCTTATCTGCAATACGAAACATGGGTTCTATGGATATCTTATGCATTGACAAGACTGGTACACTCACAATGAATCGTGCGATAATGGTTAATTATCTGGACAGCTGGGGGTTAGACAAAGAAAAGGTTTTACAGTTTGCTTTCCTCAACTCATATTTCAAGACCGATCAGAAATATCCTTTGGATGATGCAATTTTGGCACATGTATATACCAATGGATTCAGGTTCCAACCGTCAAAATGGAAGAAACTAGATGAGATTCCTTTTGATTTCATAAGAAGAAGGGTATCTATTATCATGGAAAGAGAAGAAGACACAGACCCTCACAGTTTTGTGAGAGTCATGGTGACAAAAGGAGCTCTGGAAGAAGTAATGAAAGTTTGTTCTTGTATGGAGAATGTTGACAGTGGCACGATTTCACCTCTCTCTCCAGAACAGTATCAAAGGATTATAAATATGACCGAGGAAATAAGCAATGAGGGACTAAGAGTTATAGGAGTAGCAACAAAGAAGCTGGGAAAGATAAGGTATGAGCGCAAAGATAATGATGATACTTCTGAATCAGACATGGTTTTCCTCGGCCTCATTACATTCTTCGACCCACCCAAGGACTCAGCAAAGCAAGCTCTGTGGCGGTTGGCTGAGAAGGGAGTGAAAGCAAAAGTATTAACAGGTGACTCACTGTCTCTATCTATAAGAGTTTGCAAGGAAGTTGGTATCAGAACAACTCATGTAGTTACGGGGCCAGAGCTTGAGCTACTCGACCAGGATGCCTTTCATGAGACTGTTAAAACAGCAACGGTCTTAGCTCGACTCACCCCGACGCAGAAACTCCGAGTTGTGCAATCCTTGCAAACAATTGGTAACCACATTGTTGGATTTTTGGGAGATGGAGTAAATGACTCACTTGCACTGGATGCAGCCCATGTTGGTATATCAGTTGATTCAGGAGCATCAGTTGCAAAAGACTTTGCTGACATTATCTTACTGGAGAAAGACCTGAATGTACTCATTGCCGGAGTTGAACACGGCCGACTCACTTTTGGGAACACAATGAAGTACATAAAAATGTCAGTTATAGCCAATCTGGGAAGCGTTCTCTCAATTCTCATAGCAACCCTGGTGCTCAAGTATGAGCCATTGACGGCAAGGCAGCTTCTTACACAGAACTTCTTGTATAGTGTGGGCCAGATTGCAATCCCATGGGATAAAATGGAAGATGATTATGTAAAAGTCCCACAAAGATGGTCAAAGAAAGGTTTGCCGACGTTCATTTTGTGGAATGGACCTGTCTGCACTATTTTTGATGTTACTACACTTCTGTTCCTTTGGTTCTATTATAAGGCTGATAATCTGGAGGATCTTGTTTTCTTCCACACTGCTTGGTTCATCGAAGGGCTTCTCATGCAGACCCTAATCATCCACTTGATCCGTACAGAGAAAATTCCTTTCATTCAGGAGTTTGCCTCATGGCCTGTGCTTTGTTCTACAGTTCTGGTTTCTGCAATTGGAATCGCAATTACATTCACCCCGATTGGGAAAGTGATGGGATTTATCAGGCTTCCCGTGTCATACTTTGGGTTTTTGGTAGTACTGTTTATAGGATATTTTGTTGTTGGCCAGGTGGTCAAGAGACTCTACATTTTGGTTTATAAAACCTGGCTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0008150 GO:0008324 GO:0015075 GO:0015318 GO:0015399 GO:0015405 GO:0016020 GO:0016021 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0031224 GO:0031226 GO:0034220 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044424 GO:0044425 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071944 GO:0090662 GO:0098655 GO:0098660 GO:0099131 GO:0099132

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase_C Cation_ATPase_N E1-E2_ATPase Hydrolase

Protein Analysis

939

Amino Acids

105.36

Weight (kDa)

7.52

Isoelectric Point (pI)

34.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Cation_ATPase_N	PF00690	78 - 140	8.4e-14	Cation transporter/ATPase, N-terminus
E1-E2_ATPase	PF00122	193 - 297	3.2e-17	P-type ATPase actuator domain
Cation_ATPase	PF13246	462 - 588	8.8e-22	P-type ATPase, cytoplasmic domain N
Hydrolase	PF00702	561 - 692	4.3e-07	haloacid dehalogenase-like hydrolase
Cation_ATPase_C	PF00689	764 - 930	7.6e-19	Cation transporting ATPase, C-terminus

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006908)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g20140 FvH4_1g20140 FvH4_1g20140 FvH4_1g20140 FvH4_1g20140 FvH4_1g20140
malus_domestica	MD00G1145700.v1.1 MD15G1317200.v1.1
prunus_persica	Prupe.6G194600_v2.0.a1 Prupe.6G194600_v2.0.a1 Prupe.6G194600_v2.0.a1 Prupe.6G194600_v2.0.a1
pyrus_communis	pycom01g06410
rosa_chinensis	RchiOBHm_Chr2g0112191
rosa_laevigata	RLG00000017957
rosa_multiflora	Rmu_sc0001386.1_g000001 Rmu_sc0026641.1_g000001
rosa_roxburghii	Rroxscaffold_2G00131700
rosa_rugosa	Rorug02G0179000 Rorug02G0179000 Rorug02G0179100
rosa_samantha	Rh2AG231200 Rh2BG244200 Rh2CG235600 Rh2DG239100
rosa_wichuraiana	Rw2G017920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	4 cut(s)	998, 1604, 2493, 2805
Acc36I	ACCTGC	1 cut(s)	563
AccB1I	GGYRCC	1 cut(s)	546
AccI	GTMKAC	1 cut(s)	87
AccII	CGCG	1 cut(s)	138
AccIII	TCCGGA	1 cut(s)	149
AciI	CCGC	2 cut(s)	138, 1786
AclWI	GGATC	5 cut(s)	252, 847, 871, 2520, 2575
AcoI	YGGCCR	3 cut(s)	1128, 2182, 2770
AcsI	RAATTY	3 cut(s)	536, 923, 2595
AcuI	CTGAAG	1 cut(s)	306
AfaI	GTAC	7 cut(s)	422, 603, 1213, 2160, 2213, 2587, 2745
AfiI	CCNNNNNNNGG	2 cut(s)	1759, 2688
AflIII	ACRYGT	1 cut(s)	1354
AgsI	TTSAA	8 cut(s)	13, 304, 513, 563, 650, 894, 1312, 2177
AhdI	GACNNNNNGTC	1 cut(s)	1834
AjnI	CCWGG	9 cut(s)	628, 652, 667, 734, 1086, 1917, 2271, 2772, 2810
AjuI	GAANNNNNNNTTGG	4 cut(s)	54, 86, 1316, 1348
Alw21I	GWGCWC	5 cut(s)	884, 1066, 1120, 1513, 2280
Alw26I	GTCTC	6 cut(s)	651, 673, 1128, 1842, 1928, 2779
Alw44I	GTGCAC	1 cut(s)	1062
AlwI	GGATC	5 cut(s)	252, 847, 871, 2520, 2575
Ama87I	CYCGRG	1 cut(s)	46
Aor13HI	TCCGGA	1 cut(s)	149
AoxI	GGCC	9 cut(s)	313, 714, 1128, 1732, 1895, 2182, 2338, 2624, 2770
ApaLI	GTGCAC	1 cut(s)	1062
ApeKI	GCWGC	3 cut(s)	518, 2072, 2305
ApoI	RAATTY	3 cut(s)	536, 923, 2595
ArsI	GACNNNNNNTTYG	2 cut(s)	2410, 2442
Asp700I	GAANNNNTTC	1 cut(s)	2550
AspLEI	GCGC	3 cut(s)	138, 223, 1689
AspS9I	GGNCC	4 cut(s)	314, 1895, 2338, 2438
AsuHPI	GGTGA	7 cut(s)	644, 976, 1510, 1563, 1838, 1960, 2671
AsuII	TTCGAA	1 cut(s)	692
AvaI	CYCGRG	1 cut(s)	46
AvaII	GGWCC	1 cut(s)	2438
BaeGI	GKGCMC	2 cut(s)	551, 1066
BalI	TGGCCA	2 cut(s)	1130, 2772
BanI	GGYRCC	1 cut(s)	546
BanII	GRGCYC	1 cut(s)	1513
BbsI	GAAGAC	2 cut(s)	681, 1470
Bbv12I	GWGCWC	5 cut(s)	884, 1066, 1120, 1513, 2280
BbvI	GCAGC	3 cut(s)	530, 2084, 2317
BccI	CCATC	5 cut(s)	158, 995, 2036, 2391, 2692
BceAI	ACGGC	2 cut(s)	2197, 2313
BcgI	CGANNNNNNTGC	2 cut(s)	1904, 1938
BciT130I	CCWGG	9 cut(s)	630, 654, 669, 736, 1088, 1919, 2273, 2774, 2812
BclI	TGATCA	1 cut(s)	610
BcoDI	GTCTC	6 cut(s)	651, 673, 1128, 1842, 1928, 2779
BfaI	CTAG	6 cut(s)	83, 345, 788, 848, 974, 1403
BfmI	CTRYAG	1 cut(s)	2640
BfuAI	ACCTGC	1 cut(s)	563
BglI	GCCNNNNNGGC	1 cut(s)	108
BisI	GCNGC	3 cut(s)	519, 2073, 2306
BlsI	GCNGC	3 cut(s)	520, 2074, 2307
BmcAI	AGTACT	1 cut(s)	2745
Bme1390I	CCNGG	9 cut(s)	630, 654, 669, 736, 1088, 1919, 2273, 2774, 2812
Bme18I	GGWCC	1 cut(s)	2438
BmeRI	GACNNNNNGTC	1 cut(s)	1834
BmeT110I	CYCGRG	1 cut(s)	46
BmgT120I	GGNCC	4 cut(s)	314, 1895, 2338, 2438
BmiI	GGNNCC	4 cut(s)	112, 548, 1379, 1896
BmrFI	CCNGG	9 cut(s)	630, 654, 669, 736, 1088, 1919, 2273, 2774, 2812
BmrI	ACTGGG	1 cut(s)	545
BmsI	GCATC	8 cut(s)	437, 459, 1044, 1130, 1330, 1912, 2059, 2114
BmuI	ACTGGG	1 cut(s)	545
BoxI	GACNNNNGTC	1 cut(s)	685
BpiI	GAAGAC	2 cut(s)	681, 1470
BplI	GAGNNNNNCTC	2 cut(s)	2603, 2635
BpmI	CTGGAG	5 cut(s)	675, 690, 1566, 2162, 2528
Bpu14I	TTCGAA	1 cut(s)	692
BpuEI	CTTGAG	2 cut(s)	1925, 2264
BsaBI	GATNNNNATC	1 cut(s)	2348
BsaI	GGTCTC	1 cut(s)	651
BsaJI	CCNNGG	9 cut(s)	47, 216, 522, 1086, 1614, 1729, 1758, 2271, 2354
BsaWI	WCCGGW	2 cut(s)	149, 486
BsaXI	ACNNNNNCTCC	6 cut(s)	1038, 1068, 2031, 2061, 2094, 2124
Bsc4I	CCNNNNNNNGG	2 cut(s)	1759, 2688
Bse1I	ACTGG	5 cut(s)	551, 865, 1213, 2070, 2145
Bse3DI	GCAATG	3 cut(s)	782, 1633, 2163
Bse8I	GATNNNNATC	1 cut(s)	2348
BseAI	TCCGGA	1 cut(s)	149
BseBI	CCWGG	9 cut(s)	630, 654, 669, 736, 1088, 1919, 2273, 2774, 2812
BseDI	CCNNGG	9 cut(s)	47, 216, 522, 1086, 1614, 1729, 1758, 2271, 2354
BseGI	GGATG	7 cut(s)	379, 452, 1035, 1342, 1927, 2074, 2571
BseJI	GATNNNNATC	1 cut(s)	2348
BseLI	CCNNNNNNNGG	2 cut(s)	1759, 2688
BseMI	GCAATG	3 cut(s)	782, 1633, 2163
BseMII	CTCAG	3 cut(s)	1020, 1779, 1785
BseNI	ACTGG	5 cut(s)	551, 865, 1213, 2070, 2145
BseRI	GAGGAG	2 cut(s)	203, 1062
BseSI	GKGCMC	2 cut(s)	551, 1066
BseX3I	CGGCCG	1 cut(s)	2182
BseXI	GCAGC	3 cut(s)	530, 2084, 2317
BseYI	CCCAGC	2 cut(s)	1257, 1666
BsgI	GTGCAG	2 cut(s)	591, 2431
Bsh1236I	CGCG	1 cut(s)	138
Bsh1285I	CGRYCG	1 cut(s)	2185
BshFI	GGCC	9 cut(s)	315, 716, 1130, 1734, 1897, 2184, 2340, 2626, 2772
BshNI	GGYRCC	1 cut(s)	546
BsiEI	CGRYCG	1 cut(s)	2185
BsiHKAI	GWGCWC	5 cut(s)	884, 1066, 1120, 1513, 2280
BsiHKCI	CYCGRG	1 cut(s)	46
BsiSI	CCGG	3 cut(s)	150, 487, 2169
BslFI	GGGAC	2 cut(s)	1647, 2372
BslI	CCNNNNNNNGG	2 cut(s)	1759, 2688
BsmAI	GTCTC	6 cut(s)	651, 673, 1128, 1842, 1928, 2779
BsmFI	GGGAC	2 cut(s)	1647, 2372
BsnI	GGCC	9 cut(s)	315, 716, 1130, 1734, 1897, 2184, 2340, 2626, 2772
Bso31I	GGTCTC	1 cut(s)	651
BsoBI	CYCGRG	1 cut(s)	46
Bsp119I	TTCGAA	1 cut(s)	692
Bsp1286I	GDGCHC	6 cut(s)	551, 884, 1066, 1120, 1513, 2280
Bsp13I	TCCGGA	1 cut(s)	149
Bsp143I	GATC	9 cut(s)	257, 399, 610, 839, 863, 1021, 1318, 2512, 2580
Bsp19I	CCATGG	2 cut(s)	522, 2354
BspACI	CCGC	2 cut(s)	138, 1786
BspANI	GGCC	9 cut(s)	315, 716, 1130, 1734, 1897, 2184, 2340, 2626, 2772
BspCNI	CTCAG	3 cut(s)	1021, 1778, 1786
BspEI	TCCGGA	1 cut(s)	149
BspFNI	CGCG	1 cut(s)	138
BspHI	TCATGA	1 cut(s)	1930
BspLI	GGNNCC	4 cut(s)	112, 548, 1379, 1896
BspMI	ACCTGC	1 cut(s)	563
BspPI	GGATC	5 cut(s)	252, 847, 871, 2520, 2575
BspT104I	TTCGAA	1 cut(s)	692
BspT107I	GGYRCC	1 cut(s)	546
BspTNI	GGTCTC	1 cut(s)	651
BsrDI	GCAATG	3 cut(s)	782, 1633, 2163
BsrI	ACTGG	5 cut(s)	551, 865, 1213, 2070, 2145
BssECI	CCNNGG	9 cut(s)	47, 216, 522, 1086, 1614, 1729, 1758, 2271, 2354
BssMI	GATC	9 cut(s)	257, 399, 610, 839, 863, 1021, 1318, 2512, 2580
BssT1I	CCWWGG	4 cut(s)	216, 522, 1758, 2354
Bst2UI	CCWGG	9 cut(s)	630, 654, 669, 736, 1088, 1919, 2273, 2774, 2812
BstAPI	GCANNNNNTGC	3 cut(s)	2002, 2069, 2111
BstBI	TTCGAA	1 cut(s)	692
BstC8I	GCNNGC	2 cut(s)	140, 1776
BstDEI	CTNAG	6 cut(s)	867, 1029, 1637, 1765, 1794, 1957
BstDSI	CCRYGG	2 cut(s)	522, 2354
BstEII	GGTNACC	1 cut(s)	2015
BstF5I	GGATG	7 cut(s)	379, 452, 1035, 1342, 1927, 2074, 2571
BstFNI	CGCG	1 cut(s)	138
BstHHI	GCGC	3 cut(s)	138, 223, 1689
BstKTI	GATC	9 cut(s)	260, 402, 613, 842, 866, 1024, 1321, 2515, 2583
BstMAI	GTCTC	6 cut(s)	651, 673, 1128, 1842, 1928, 2779
BstMBI	GATC	9 cut(s)	257, 399, 610, 839, 863, 1021, 1318, 2512, 2580
BstMCI	CGRYCG	1 cut(s)	2185
BstMWI	GCNNNNNNNGC	8 cut(s)	108, 1115, 1349, 1775, 2002, 2069, 2111, 2557
BstNI	CCWGG	9 cut(s)	630, 654, 669, 736, 1088, 1919, 2273, 2774, 2812
BstNSI	RCATGY	1 cut(s)	1358
BstPAI	GACNNNNGTC	1 cut(s)	685
BstPI	GGTNACC	1 cut(s)	2015
BstSCI	CCNGG	9 cut(s)	628, 652, 667, 734, 1086, 1917, 2271, 2772, 2810
BstSFI	CTRYAG	1 cut(s)	2640
BstSLI	GKGCMC	2 cut(s)	551, 1066
BstUI	CGCG	1 cut(s)	138
BstV1I	GCAGC	3 cut(s)	530, 2084, 2317
BstV2I	GAAGAC	2 cut(s)	681, 1470
BstX2I	RGATCY	3 cut(s)	839, 863, 2512
BstXI	CCANNNNNNTGG	2 cut(s)	2027, 2397
BstYI	RGATCY	3 cut(s)	839, 863, 2512
BstZI	CGGCCG	1 cut(s)	2182
BsuRI	GGCC	9 cut(s)	315, 716, 1130, 1734, 1897, 2184, 2340, 2626, 2772
BtgI	CCRYGG	2 cut(s)	522, 2354
BtsCI	GGATG	7 cut(s)	379, 452, 1035, 1342, 1927, 2074, 2571
BtsI	GCAGTG	2 cut(s)	841, 2529
BtsIMutI	CAGTG	6 cut(s)	841, 858, 1564, 1832, 2063, 2529
BveI	ACCTGC	1 cut(s)	563
Cac8I	GCNNGC	2 cut(s)	140, 1776
CciI	TCATGA	1 cut(s)	1930
CfoI	GCGC	3 cut(s)	138, 223, 1689
Cfr13I	GGNCC	4 cut(s)	314, 1895, 2338, 2438
CseI	GACGC	1 cut(s)	1984
Csp6I	GTAC	7 cut(s)	421, 602, 1212, 2159, 2212, 2586, 2744
CspCI	CAANNNNNGTGG	4 cut(s)	1763, 1798, 2516, 2551
CviQI	GTAC	7 cut(s)	421, 602, 1212, 2159, 2212, 2586, 2744
DdeI	CTNAG	6 cut(s)	867, 1029, 1637, 1765, 1794, 1957
DpnI	GATC	9 cut(s)	259, 401, 612, 841, 865, 1023, 1320, 2514, 2582
DpnII	GATC	9 cut(s)	257, 399, 610, 839, 863, 1021, 1318, 2512, 2580
DriI	GACNNNNNGTC	1 cut(s)	1834
EaeI	YGGCCR	3 cut(s)	1128, 2182, 2770
EagI	CGGCCG	1 cut(s)	2182
Eam1105I	GACNNNNNGTC	1 cut(s)	1834
Ecl136II	GAGCTC	1 cut(s)	1511
EclXI	CGGCCG	1 cut(s)	2182
Eco130I	CCWWGG	4 cut(s)	216, 522, 1758, 2354
Eco147I	AGGCCT	1 cut(s)	716
Eco24I	GRGCYC	1 cut(s)	1513
Eco31I	GGTCTC	1 cut(s)	651
Eco32I	GATATC	2 cut(s)	760, 1189
Eco47I	GGWCC	1 cut(s)	2438
Eco52I	CGGCCG	1 cut(s)	2182
Eco53kI	GAGCTC	1 cut(s)	1511
Eco57I	CTGAAG	1 cut(s)	306
Eco88I	CYCGRG	1 cut(s)	46
Eco91I	GGTNACC	1 cut(s)	2015
EcoICRI	GAGCTC	1 cut(s)	1511
EcoO65I	GGTNACC	1 cut(s)	2015
EcoRII	CCWGG	9 cut(s)	628, 652, 667, 734, 1086, 1917, 2271, 2772, 2810
EcoRV	GATATC	2 cut(s)	760, 1189
EcoT14I	CCWWGG	4 cut(s)	216, 522, 1758, 2354
EcoT22I	ATGCAT	3 cut(s)	452, 1145, 1199
EcoT38I	GRGCYC	1 cut(s)	1513
ErhI	CCWWGG	4 cut(s)	216, 522, 1758, 2354
FalI	AAGNNNNNCTT	2 cut(s)	1104, 1136
FaqI	GGGAC	2 cut(s)	1647, 2372
FauI	CCCGC	1 cut(s)	131
FbaI	TGATCA	1 cut(s)	610
FblI	GTMKAC	1 cut(s)	87
Fnu4HI	GCNGC	3 cut(s)	519, 2073, 2306
FokI	GGATG	7 cut(s)	366, 459, 1022, 1349, 1934, 2081, 2558
FriOI	GRGCYC	1 cut(s)	1513
Fsp4HI	GCNGC	3 cut(s)	519, 2073, 2306
FspBI	CTAG	6 cut(s)	83, 345, 788, 848, 974, 1403
GlaI	GCGC	3 cut(s)	137, 222, 1688
GluI	GCNGC	3 cut(s)	519, 2073, 2306
GsaI	CCCAGC	2 cut(s)	1261, 1670
GsuI	CTGGAG	5 cut(s)	675, 690, 1566, 2162, 2528
HaeIII	GGCC	9 cut(s)	315, 716, 1130, 1734, 1897, 2184, 2340, 2626, 2772
HapII	CCGG	3 cut(s)	150, 487, 2169
HgaI	GACGC	1 cut(s)	1984
HhaI	GCGC	3 cut(s)	138, 223, 1689
Hin6I	GCGC	3 cut(s)	136, 221, 1687
HinP1I	GCGC	3 cut(s)	136, 221, 1687
HincII	GTYRAC	2 cut(s)	1096, 1555
HindII	GTYRAC	2 cut(s)	1096, 1555
HindIII	AAGCTT	2 cut(s)	194, 1153
HpaI	GTTAAC	1 cut(s)	1096
HpaII	CCGG	3 cut(s)	150, 487, 2169
HphI	GGTGA	7 cut(s)	644, 976, 1510, 1563, 1838, 1960, 2671
Hpy166II	GTNNAC	5 cut(s)	88, 1064, 1096, 1214, 1555
Hpy8I	GTNNAC	5 cut(s)	88, 1064, 1096, 1214, 1555
Hpy99I	CGWCG	3 cut(s)	945, 1978, 2422
HpyAV	CCTTC	4 cut(s)	298, 1428, 1792, 2540
HpyCH4IV	ACGT	1 cut(s)	2420
HpyF10VI	GCNNNNNNNGC	8 cut(s)	108, 1115, 1349, 1775, 2002, 2069, 2111, 2557
HpyF3I	CTNAG	6 cut(s)	867, 1029, 1637, 1765, 1794, 1957
HpySE526I	ACGT	1 cut(s)	2420
HspAI	GCGC	3 cut(s)	136, 221, 1687
Kpn2I	TCCGGA	1 cut(s)	149
Ksp22I	TGATCA	1 cut(s)	610
KspAI	GTTAAC	1 cut(s)	1096
Kzo9I	GATC	9 cut(s)	257, 399, 610, 839, 863, 1021, 1318, 2512, 2580
LmnI	GCTCC	4 cut(s)	116, 1115, 1508, 2102
Lsp1109I	GCAGC	3 cut(s)	530, 2084, 2317
LweI	GCATC	8 cut(s)	437, 459, 1044, 1130, 1330, 1912, 2059, 2114
MaeI	CTAG	6 cut(s)	83, 345, 788, 848, 974, 1403
MaeII	ACGT	1 cut(s)	2420
MaeIII	GTNAC	6 cut(s)	982, 1498, 1826, 1888, 2015, 2461
MalI	GATC	9 cut(s)	259, 401, 612, 841, 865, 1023, 1320, 2514, 2582
MboI	GATC	9 cut(s)	257, 399, 610, 839, 863, 1021, 1318, 2512, 2580
MfeI	CAATTG	2 cut(s)	2010, 2658
MflI	RGATCY	3 cut(s)	839, 863, 2512
MhlI	GDGCHC	6 cut(s)	551, 884, 1066, 1120, 1513, 2280
MlsI	TGGCCA	2 cut(s)	1130, 2772
MluNI	TGGCCA	2 cut(s)	1130, 2772
MlyI	GAGTC	8 cut(s)	740, 1500, 1757, 1823, 1959, 2048, 2181, 2781
MmeI	TCCRAC	3 cut(s)	138, 1405, 2008
Mox20I	TGGCCA	2 cut(s)	1130, 2772
Mph1103I	ATGCAT	3 cut(s)	452, 1145, 1199
MroI	TCCGGA	1 cut(s)	149
MroXI	GAANNNNTTC	1 cut(s)	2550
MscI	TGGCCA	2 cut(s)	1130, 2772
MseI	TTAA	7 cut(s)	387, 722, 794, 1095, 1242, 1820, 1941
MslI	CAYNNNNRTG	2 cut(s)	2219, 2395
Msp20I	TGGCCA	2 cut(s)	1130, 2772
MspA1I	CMGCKG	2 cut(s)	755, 1257
MspI	CCGG	3 cut(s)	150, 487, 2169
MspR9I	CCNGG	9 cut(s)	630, 654, 669, 736, 1088, 1919, 2273, 2774, 2812
MunI	CAATTG	2 cut(s)	2010, 2658
MvaI	CCWGG	9 cut(s)	630, 654, 669, 736, 1088, 1919, 2273, 2774, 2812
MvnI	CGCG	1 cut(s)	138
MwoI	GCNNNNNNNGC	8 cut(s)	108, 1115, 1349, 1775, 2002, 2069, 2111, 2557
NcoI	CCATGG	2 cut(s)	522, 2354
NdeII	GATC	9 cut(s)	257, 399, 610, 839, 863, 1021, 1318, 2512, 2580
NlaIV	GGNNCC	4 cut(s)	112, 548, 1379, 1896
NmeAIII	GCCGAG	1 cut(s)	1710
NmuCI	GTSAC	3 cut(s)	982, 1498, 1826
NsiI	ATGCAT	3 cut(s)	452, 1145, 1199
NspI	RCATGY	1 cut(s)	1358
NspV	TTCGAA	1 cut(s)	692
PagI	TCATGA	1 cut(s)	1930
PceI	AGGCCT	1 cut(s)	716
PciI	ACATGT	1 cut(s)	1354
PdmI	GAANNNNTTC	1 cut(s)	2550
PfeI	GAWTC	8 cut(s)	129, 769, 1225, 1371, 1411, 1712, 2096, 2664
PfoI	TCCNGGA	2 cut(s)	667, 734
PkrI	GCNGC	3 cut(s)	520, 2074, 2307
PleI	GAGTC	8 cut(s)	739, 1499, 1757, 1823, 1959, 2048, 2181, 2781
PpsI	GAGTC	8 cut(s)	739, 1499, 1757, 1823, 1959, 2048, 2181, 2781
PscI	ACATGT	1 cut(s)	1354
PshAI	GACNNNNGTC	1 cut(s)	685
PsiI	TTATAA	4 cut(s)	998, 1604, 2493, 2805
Psp124BI	GAGCTC	1 cut(s)	1513
Psp6I	CCWGG	9 cut(s)	628, 652, 667, 734, 1086, 1917, 2271, 2772, 2810
PspEI	GGTNACC	1 cut(s)	2015
PspFI	CCCAGC	2 cut(s)	1257, 1666
PspGI	CCWGG	9 cut(s)	628, 652, 667, 734, 1086, 1917, 2271, 2772, 2810
PspN4I	GGNNCC	4 cut(s)	112, 548, 1379, 1896
PspPI	GGNCC	4 cut(s)	314, 1895, 2338, 2438
PsuI	RGATCY	3 cut(s)	839, 863, 2512
PvuII	CAGCTG	2 cut(s)	755, 1257
RsaI	GTAC	7 cut(s)	422, 603, 1213, 2160, 2213, 2587, 2745
RsaNI	GTAC	7 cut(s)	421, 602, 1212, 2159, 2212, 2586, 2744
RseI	CAYNNNNRTG	2 cut(s)	2219, 2395
SacI	GAGCTC	1 cut(s)	1513
SaqAI	TTAA	7 cut(s)	387, 722, 794, 1095, 1242, 1820, 1941
SatI	GCNGC	3 cut(s)	519, 2073, 2306
Sau3AI	GATC	9 cut(s)	257, 399, 610, 839, 863, 1021, 1318, 2512, 2580
Sau96I	GGNCC	4 cut(s)	314, 1895, 2338, 2438
ScaI	AGTACT	1 cut(s)	2745
SchI	GAGTC	8 cut(s)	740, 1500, 1757, 1823, 1959, 2048, 2181, 2781
ScrFI	CCNGG	9 cut(s)	630, 654, 669, 736, 1088, 1919, 2273, 2774, 2812
SduI	GDGCHC	6 cut(s)	551, 884, 1066, 1120, 1513, 2280
SfaNI	GCATC	8 cut(s)	437, 459, 1044, 1130, 1330, 1912, 2059, 2114
SfcI	CTRYAG	1 cut(s)	2640
SfuI	TTCGAA	1 cut(s)	692
SinI	GGWCC	1 cut(s)	2438
SmiMI	CAYNNNNRTG	2 cut(s)	2219, 2395
SmlI	CTYRAG	2 cut(s)	1904, 2279
SmoI	CTYRAG	2 cut(s)	1904, 2279
SseBI	AGGCCT	1 cut(s)	716
SsiI	CCGC	2 cut(s)	138, 1786
SspI	AATATT	1 cut(s)	802
SspMI	CTAG	6 cut(s)	83, 345, 788, 848, 974, 1403
SstI	GAGCTC	1 cut(s)	1513
StuI	AGGCCT	1 cut(s)	716
StyD4I	CCNGG	9 cut(s)	628, 652, 667, 734, 1086, 1917, 2271, 2772, 2810
StyI	CCWWGG	4 cut(s)	216, 522, 1758, 2354
TaiI	ACGT	1 cut(s)	2423
TaqI	TCGA	8 cut(s)	173, 246, 256, 692, 1749, 1914, 1963, 2544
TaqII	GACCGA	2 cut(s)	1331, 1628
TatI	WGTACW	4 cut(s)	601, 2158, 2211, 2743
TfiI	GAWTC	8 cut(s)	129, 769, 1225, 1371, 1411, 1712, 2096, 2664
Tru1I	TTAA	7 cut(s)	387, 722, 794, 1095, 1242, 1820, 1941
Tru9I	TTAA	7 cut(s)	387, 722, 794, 1095, 1242, 1820, 1941
TscAI	CASTG	6 cut(s)	841, 865, 1564, 1839, 2070, 2536
TseFI	GTSAC	3 cut(s)	982, 1498, 1826
TseI	GCWGC	3 cut(s)	518, 2072, 2305
Tsp45I	GTSAC	3 cut(s)	982, 1498, 1826
TspGWI	ACGGA	2 cut(s)	519, 2573
TspRI	CASTG	6 cut(s)	841, 865, 1564, 1839, 2070, 2536
VneI	GTGCAC	1 cut(s)	1062
VpaK11BI	GGWCC	1 cut(s)	2438
XapI	RAATTY	3 cut(s)	536, 923, 2595
XceI	RCATGY	1 cut(s)	1358
XmiI	GTMKAC	1 cut(s)	87
XmnI	GAANNNNTTC	1 cut(s)	2550
XspI	CTAG	6 cut(s)	83, 345, 788, 848, 974, 1403
ZrmI	AGTACT	1 cut(s)	2745
Zsp2I	ATGCAT	3 cut(s)	452, 1145, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.