Rmu_sc0001601.1_g000005

TPL-binding domain in jasmonate signalling

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001601.1
OG0009698
Physical Location & Seq
Forward (+)
28488 .. 31299
2812 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1803 bp
ctgctcacagatctccccgcgatcgccgcccagagcctcccacttcagataacatcaatgtgcattgttggtgaagagaaatttgtatcggagggtgtcgatagaagggtgaccggagcgttggaccggatagggcagtgtgatagcttcagcggggaggagtttgaagtgaagaagcaacagaaatggtatgttgtttgcttttcgcatgtgtttttggcaatgtggaatcagggcttttggatggcaaagggtaccgggggtgtaaatgatggtgagaggctttatgataattcttctgcaactgagcctaagcgttctcatcaatggttcatggatggtcctgaggtagagttattcccaaacaagaaacaggctattgaagttccaggcaccaatctattttcaggcttgttgaacgcaaatgtttctccatggggaaatgttcccagttttcagtcattctctggccagttcactgaaaggttatttgattctgaagcagacagagctgtgaattttgaggacagaaacatttcatcagttggctcagaaaaaatgagaaaaattaatgaggatctatttgggaatgattcttcttttggtttatctatgtcccattcactggaagatcctaggttgagtcctaactatggtggttttagaaaagtgaaagtcagtgaggtaaaggactctgagaatgtcatgcgtgtttcggttggacatgcttataatccgggagataacgatgccatgttggcgcctcatgtttacaaggcggatgacaactcaggatcaatgggtctcacttataagaaagaggatgagaacttcacaaccatgagtgattcctataatagggcagataacaattttagatcaatgggacactttactaaaggggatgagtacataggaattggtcaaacatacaaggaaaatagtaatacccttttgaggagtcgaacattcaacaagggtgacagcactatcatctcggttggtgaaacctccaacaaggcagatgaaagtaccatgccaactggtcatatttatagtaaaggggaagagatatcaatgggtcatgactatagcaaggtcgacaataatatgttgtcaattggtcactcttacaataagggagagagtaccatcatatcctttggcgggtgtgatgatgatgatgtaaatacctcaacaatctctggctatgaacttcttatgggtcaatcttttccaaaaacagaagctatgaatgagaaagacttgggtaaattaaatgctgatgcatttgtaaatcaacctcatataattgctggagctgaaactgtttccagaaagaaggatgaccagaaaatgtctaagaagtcgccttcaaacaacttcccttcgaatgtgcgaagtttgctatcaactggtatgctggatggagttcctgtaaagtatattgcctggtcacgggagaaggagctgcaggctgtaattaaaggttctgggtatctatgtggctgtcagtcatgtaacttctctaaggtaatcaatgcatatgaatttgagcgtcatgctagttgcaaaacaaaacacccaaacaaccacatatattttgagaatgggaagaccatctatggaattgtgcaagagctcaggagcacacctcagaatatgctgtttgacgttattcagactattactggttcacaaatcaatcagaaatccttccgtctttggaaagaatcgtttttggcagcaacacgtgaacttcaacgtatatacggcaaggatgaagtgaaacaattggcatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Jas

Protein Analysis

600

Amino Acids

66.91

Weight (kDa)

5.66

Isoelectric Point (pI)

42.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TDBD PF16135 494 - 547 3.2e-13 Tify domain binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 732, 813
Acc65I GGTACC 1 cut(s) 254
AccB1I GGYRCC 3 cut(s) 254, 392, 760
AccB7I CCANNNNNTGG 1 cut(s) 625
AccI GTMKAC 1 cut(s) 1101
AccII CGCG 1 cut(s) 20
AciI CCGC 5 cut(s) 18, 27, 153, 779, 1167
AclWI GGATC 3 cut(s) 585, 626, 802
AcoI YGGCCR 1 cut(s) 469
AcsI RAATTY 3 cut(s) 80, 517, 1550
AcuI CTGAAG 3 cut(s) 29, 133, 519
AcvI CACGTG 1 cut(s) 1754
AcyI GRCGYC 1 cut(s) 761
AfaI GTAC 4 cut(s) 256, 911, 1033, 1150
AfiI CCNNNNNNNGG 6 cut(s) 625, 653, 858, 957, 1167, 1458
AflIII ACRYGT 1 cut(s) 1751
AgsI TTSAA 6 cut(s) 167, 383, 418, 973, 1377, 1763
AjnI CCWGG 2 cut(s) 388, 1451
AluBI AGCT 6 cut(s) 147, 512, 1250, 1322, 1471, 1642
AluI AGCT 6 cut(s) 147, 512, 1250, 1322, 1471, 1642
Alw21I GWGCWC 2 cut(s) 1644, 1652
Alw26I GTCTC 1 cut(s) 809
AlwI GGATC 3 cut(s) 585, 626, 802
AoxI GGCC 1 cut(s) 469
ApeKI GCWGC 2 cut(s) 1471, 1745
ApoI RAATTY 3 cut(s) 80, 517, 1550
AseI ATTAAT 1 cut(s) 570
AsiSI GCGATCGC 1 cut(s) 24
Asp700I GAANNNNTTC 2 cut(s) 535, 1715
Asp718I GGTACC 1 cut(s) 254
AspA2I CCTAGG 1 cut(s) 635
AspLEI GCGC 1 cut(s) 763
AspS9I GGNCC 2 cut(s) 124, 341
AsuC2I CCSGG 2 cut(s) 259, 738
AsuHPI GGTGA 5 cut(s) 83, 121, 287, 992, 1016
AsuII TTCGAA 1 cut(s) 1391
AvaII GGWCC 2 cut(s) 124, 341
AvrII CCTAGG 1 cut(s) 635
AxyI CCTNAGG 1 cut(s) 345
BalI TGGCCA 1 cut(s) 471
BanI GGYRCC 3 cut(s) 254, 392, 760
BanII GRGCYC 1 cut(s) 1644
BbrPI CACGTG 1 cut(s) 1754
BbsI GAAGAC 1 cut(s) 1622
Bbv12I GWGCWC 2 cut(s) 1644, 1652
BbvI GCAGC 2 cut(s) 1458, 1757
BccI CCATC 6 cut(s) 238, 266, 332, 1160, 1421, 1628
BceAI ACGGC 1 cut(s) 1789
BciT130I CCWGG 2 cut(s) 390, 1453
BcnI CCSGG 2 cut(s) 259, 738
BcoDI GTCTC 1 cut(s) 809
BfaI CTAG 2 cut(s) 636, 1566
BfmI CTRYAG 2 cut(s) 1090, 1472
BfoI RGCGCY 1 cut(s) 764
BglI GCCNNNNNGGC 1 cut(s) 758
BglII AGATCT 1 cut(s) 10
BisI GCNGC 3 cut(s) 27, 1472, 1746
BlnI CCTAGG 1 cut(s) 635
BlsI GCNGC 3 cut(s) 28, 1473, 1747
Bme1390I CCNGG 4 cut(s) 259, 390, 738, 1453
Bme18I GGWCC 2 cut(s) 124, 341
BmgT120I GGNCC 2 cut(s) 124, 341
BmiI GGNNCC 3 cut(s) 256, 394, 762
BmrFI CCNGG 4 cut(s) 259, 390, 738, 1453
BmrI ACTGGG 1 cut(s) 444
BmsI GCATC 2 cut(s) 739, 1276
BmuI ACTGGG 1 cut(s) 444
BpiI GAAGAC 1 cut(s) 1622
BplI GAGNNNNNCTC 2 cut(s) 1639, 1671
BpmI CTGGAG 1 cut(s) 1338
Bpu10I CCTNAGC 2 cut(s) 312, 1643
Bpu14I TTCGAA 1 cut(s) 1391
BpuMI CCSGG 2 cut(s) 259, 738
BsaAI YACGTR 1 cut(s) 1754
BsaHI GRCGYC 1 cut(s) 761
BsaI GGTCTC 1 cut(s) 809
BsaJI CCNNGG 3 cut(s) 258, 434, 635
BsaWI WCCGGW 2 cut(s) 113, 126
BsaXI ACNNNNNCTCC 2 cut(s) 1422, 1452
Bsc4I CCNNNNNNNGG 6 cut(s) 625, 653, 858, 957, 1167, 1458
Bse1I ACTGG 6 cut(s) 450, 472, 630, 1048, 1420, 1696
Bse21I CCTNAGG 1 cut(s) 345
Bse3DI GCAATG 1 cut(s) 228
BseBI CCWGG 2 cut(s) 390, 1453
BseDI CCNNGG 3 cut(s) 258, 434, 635
BseGI GGATG 8 cut(s) 249, 343, 787, 829, 910, 1351, 1432, 1786
BseLI CCNNNNNNNGG 6 cut(s) 625, 653, 858, 957, 1167, 1458
BseMI GCAATG 1 cut(s) 228
BseMII CTCAG 7 cut(s) 297, 336, 564, 687, 804, 1657, 1670
BseNI ACTGG 6 cut(s) 450, 472, 630, 1048, 1420, 1696
BseRI GAGGAG 2 cut(s) 173, 973
BseXI GCAGC 2 cut(s) 1458, 1757
Bsh1236I CGCG 1 cut(s) 20
Bsh1285I CGRYCG 1 cut(s) 24
BshFI GGCC 1 cut(s) 471
BshNI GGYRCC 3 cut(s) 254, 392, 760
BsiEI CGRYCG 1 cut(s) 24
BsiHKAI GWGCWC 2 cut(s) 1644, 1652
BsiSI CCGG 4 cut(s) 114, 127, 258, 737
BslFI GGGAC 2 cut(s) 601, 900
BslI CCNNNNNNNGG 6 cut(s) 625, 653, 858, 957, 1167, 1458
BsmAI GTCTC 1 cut(s) 809
BsmFI GGGAC 2 cut(s) 601, 900
BsnI GGCC 1 cut(s) 471
Bso31I GGTCTC 1 cut(s) 809
Bsp119I TTCGAA 1 cut(s) 1391
Bsp1286I GDGCHC 2 cut(s) 1644, 1652
Bsp143I GATC 6 cut(s) 10, 21, 577, 631, 794, 878
Bsp19I CCATGG 1 cut(s) 434
BspACI CCGC 5 cut(s) 18, 27, 153, 779, 1167
BspANI GGCC 1 cut(s) 471
BspCNI CTCAG 7 cut(s) 298, 337, 563, 688, 803, 1656, 1669
BspFNI CGCG 1 cut(s) 20
BspHI TCATGA 1 cut(s) 1084
BspLI GGNNCC 3 cut(s) 256, 394, 762
BspMAI CTGCAG 1 cut(s) 1476
BspPI GGATC 3 cut(s) 585, 626, 802
BspT104I TTCGAA 1 cut(s) 1391
BspT107I GGYRCC 3 cut(s) 254, 392, 760
BspTNI GGTCTC 1 cut(s) 809
BsrDI GCAATG 1 cut(s) 228
BsrI ACTGG 6 cut(s) 450, 472, 630, 1048, 1420, 1696
BssECI CCNNGG 3 cut(s) 258, 434, 635
BssMI GATC 6 cut(s) 10, 21, 577, 631, 794, 878
BssNI GRCGYC 1 cut(s) 761
BssT1I CCWWGG 2 cut(s) 434, 635
Bst2UI CCWGG 2 cut(s) 390, 1453
Bst4CI ACNGT 1 cut(s) 1330
Bst6I CTCTTC 2 cut(s) 69, 1062
BstACI GRCGYC 1 cut(s) 761
BstBAI YACGTR 1 cut(s) 1754
BstBI TTCGAA 1 cut(s) 1391
BstC8I GCNNGC 1 cut(s) 1476
BstDSI CCRYGG 1 cut(s) 434
BstEII GGTNACC 1 cut(s) 109
BstENI CCTNNNNNAGG 1 cut(s) 856
BstF5I GGATG 8 cut(s) 249, 343, 787, 829, 910, 1351, 1432, 1786
BstFNI CGCG 1 cut(s) 20
BstH2I RGCGCY 1 cut(s) 764
BstHHI GCGC 1 cut(s) 763
BstKTI GATC 6 cut(s) 13, 24, 580, 634, 797, 881
BstMAI GTCTC 1 cut(s) 809
BstMBI GATC 6 cut(s) 10, 21, 577, 631, 794, 878
BstMCI CGRYCG 1 cut(s) 24
BstMWI GCNNNNNNNGC 4 cut(s) 26, 509, 758, 1405
BstNI CCWGG 2 cut(s) 390, 1453
BstNSI RCATGY 2 cut(s) 212, 728
BstPI GGTNACC 1 cut(s) 109
BstSCI CCNGG 4 cut(s) 257, 388, 736, 1451
BstSFI CTRYAG 2 cut(s) 1090, 1472
BstUI CGCG 1 cut(s) 20
BstV1I GCAGC 2 cut(s) 1458, 1757
BstV2I GAAGAC 1 cut(s) 1622
BstX2I RGATCY 3 cut(s) 10, 577, 631
BstYI RGATCY 3 cut(s) 10, 577, 631
Bsu36I CCTNAGG 1 cut(s) 345
BsuRI GGCC 1 cut(s) 471
BtgI CCRYGG 1 cut(s) 434
BtsCI GGATG 8 cut(s) 249, 343, 787, 829, 910, 1351, 1432, 1786
BtsI GCAGTG 1 cut(s) 143
BtsIMutI CAGTG 4 cut(s) 143, 477, 623, 685
Cac8I GCNNGC 1 cut(s) 1476
CciI TCATGA 1 cut(s) 1084
CfoI GCGC 1 cut(s) 763
Cfr13I GGNCC 2 cut(s) 124, 341
CseI GACGC 1 cut(s) 1547
Csp6I GTAC 4 cut(s) 255, 910, 1032, 1149
CviQI GTAC 4 cut(s) 255, 910, 1032, 1149
DinI GGCGCC 1 cut(s) 762
DpnI GATC 6 cut(s) 12, 23, 579, 633, 796, 880
DpnII GATC 6 cut(s) 10, 21, 577, 631, 794, 878
EaeI YGGCCR 1 cut(s) 469
Eam1104I CTCTTC 2 cut(s) 69, 1062
EarI CTCTTC 2 cut(s) 69, 1062
EciI GGCGGA 1 cut(s) 794
Ecl136II GAGCTC 1 cut(s) 1642
Eco130I CCWWGG 2 cut(s) 434, 635
Eco24I GRGCYC 1 cut(s) 1644
Eco31I GGTCTC 1 cut(s) 809
Eco32I GATATC 1 cut(s) 1074
Eco47I GGWCC 2 cut(s) 124, 341
Eco53kI GAGCTC 1 cut(s) 1642
Eco57I CTGAAG 3 cut(s) 29, 133, 519
Eco72I CACGTG 1 cut(s) 1754
Eco81I CCTNAGG 1 cut(s) 345
Eco91I GGTNACC 1 cut(s) 109
EcoICRI GAGCTC 1 cut(s) 1642
EcoNI CCTNNNNNAGG 1 cut(s) 856
EcoO65I GGTNACC 1 cut(s) 109
EcoRII CCWGG 2 cut(s) 388, 1451
EcoRV GATATC 1 cut(s) 1074
EcoT14I CCWWGG 2 cut(s) 434, 635
EcoT22I ATGCAT 2 cut(s) 1291, 1546
EcoT38I GRGCYC 1 cut(s) 1644
EgeI GGCGCC 1 cut(s) 762
EheI GGCGCC 1 cut(s) 762
ErhI CCWWGG 2 cut(s) 434, 635
FaqI GGGAC 2 cut(s) 601, 900
FauI CCCGC 3 cut(s) 25, 146, 1160
FauNDI CATATG 1 cut(s) 1546
FblI GTMKAC 1 cut(s) 1101
Fnu4HI GCNGC 3 cut(s) 27, 1472, 1746
FokI GGATG 8 cut(s) 256, 350, 794, 836, 917, 1358, 1439, 1793
FriOI GRGCYC 1 cut(s) 1644
Fsp4HI GCNGC 3 cut(s) 27, 1472, 1746
FspBI CTAG 2 cut(s) 636, 1566
GlaI GCGC 1 cut(s) 762
GluI GCNGC 3 cut(s) 27, 1472, 1746
GsuI CTGGAG 1 cut(s) 1338
HaeII RGCGCY 1 cut(s) 764
HaeIII GGCC 1 cut(s) 471
HapII CCGG 4 cut(s) 114, 127, 258, 737
HgaI GACGC 1 cut(s) 1547
HhaI GCGC 1 cut(s) 763
Hin1I GRCGYC 1 cut(s) 761
Hin6I GCGC 1 cut(s) 761
HinP1I GCGC 1 cut(s) 761
HincII GTYRAC 1 cut(s) 1102
HindII GTYRAC 1 cut(s) 1102
HinfI GANTC 8 cut(s) 229, 494, 593, 643, 692, 848, 961, 1733
HpaII CCGG 4 cut(s) 114, 127, 258, 737
HphI GGTGA 5 cut(s) 83, 121, 287, 992, 1016
Hpy166II GTNNAC 5 cut(s) 477, 772, 1102, 1697, 1757
Hpy188I TCNGA 8 cut(s) 48, 91, 499, 553, 697, 1659, 1683, 1710
Hpy188III TCNNGA 5 cut(s) 344, 792, 1085, 1335, 1645
Hpy8I GTNNAC 5 cut(s) 477, 772, 1102, 1697, 1757
HpyAV CCTTC 6 cut(s) 99, 1336, 1383, 1398, 1459, 1726
HpyCH4III ACNGT 1 cut(s) 1330
HpyCH4IV ACGT 3 cut(s) 1674, 1753, 1765
HpyCH4V TGCA 7 cut(s) 63, 302, 1289, 1474, 1544, 1572, 1636
HpyF10VI GCNNNNNNNGC 4 cut(s) 26, 509, 758, 1405
HpySE526I ACGT 3 cut(s) 1674, 1753, 1765
Hsp92I GRCGYC 1 cut(s) 761
HspAI GCGC 1 cut(s) 761
KasI GGCGCC 1 cut(s) 760
KpnI GGTACC 1 cut(s) 258
Kzo9I GATC 6 cut(s) 10, 21, 577, 631, 794, 878
LmnI GCTCC 4 cut(s) 116, 1319, 1468, 1647
Lsp1109I GCAGC 2 cut(s) 1458, 1757
LweI GCATC 2 cut(s) 739, 1276
MaeI CTAG 2 cut(s) 636, 1566
MaeII ACGT 3 cut(s) 1674, 1753, 1765
MaeIII GTNAC 5 cut(s) 109, 980, 1124, 1455, 1520
MalI GATC 6 cut(s) 12, 23, 579, 633, 796, 880
MboI GATC 6 cut(s) 10, 21, 577, 631, 794, 878
MboII GAAGA 7 cut(s) 86, 184, 288, 588, 641, 1079, 1627
MfeI CAATTG 2 cut(s) 1119, 1793
MflI RGATCY 3 cut(s) 10, 577, 631
MhlI GDGCHC 2 cut(s) 1644, 1652
MlsI TGGCCA 1 cut(s) 471
MluNI TGGCCA 1 cut(s) 471
Mly113I GGCGCC 1 cut(s) 761
MlyI GAGTC 3 cut(s) 652, 686, 970
MmeI TCCRAC 3 cut(s) 102, 700, 1038
Mox20I TGGCCA 1 cut(s) 471
Mph1103I ATGCAT 2 cut(s) 1291, 1546
MroXI GAANNNNTTC 2 cut(s) 535, 1715
MscI TGGCCA 1 cut(s) 471
MseI TTAA 3 cut(s) 570, 1277, 1485
MslI CAYNNNNRTG 2 cut(s) 58, 839
Msp20I TGGCCA 1 cut(s) 471
MspA1I CMGCKG 1 cut(s) 153
MspI CCGG 4 cut(s) 114, 127, 258, 737
MspR9I CCNGG 4 cut(s) 259, 390, 738, 1453
MunI CAATTG 2 cut(s) 1119, 1793
MvaI CCWGG 2 cut(s) 390, 1453
MvnI CGCG 1 cut(s) 20
MwoI GCNNNNNNNGC 4 cut(s) 26, 509, 758, 1405
NarI GGCGCC 1 cut(s) 761
NciI CCSGG 2 cut(s) 259, 738
NcoI CCATGG 1 cut(s) 434
NdeI CATATG 1 cut(s) 1546
NdeII GATC 6 cut(s) 10, 21, 577, 631, 794, 878
NlaIV GGNNCC 3 cut(s) 256, 394, 762
NmuCI GTSAC 4 cut(s) 109, 980, 1124, 1455
NsiI ATGCAT 2 cut(s) 1291, 1546
NspI RCATGY 2 cut(s) 212, 728
NspV TTCGAA 1 cut(s) 1391
PagI TCATGA 1 cut(s) 1084
PdmI GAANNNNTTC 2 cut(s) 535, 1715
PfeI GAWTC 5 cut(s) 229, 494, 593, 848, 1733
PflMI CCANNNNNTGG 1 cut(s) 625
PfoI TCCNGGA 1 cut(s) 736
PkrI GCNGC 3 cut(s) 28, 1473, 1747
Ple19I CGATCG 1 cut(s) 24
PleI GAGTC 3 cut(s) 651, 686, 969
PluTI GGCGCC 1 cut(s) 764
PmaCI CACGTG 1 cut(s) 1754
PmlI CACGTG 1 cut(s) 1754
PpsI GAGTC 3 cut(s) 651, 686, 969
Ppu21I YACGTR 1 cut(s) 1754
PshBI ATTAAT 1 cut(s) 570
PsiI TTATAA 2 cut(s) 732, 813
Psp124BI GAGCTC 1 cut(s) 1644
Psp6I CCWGG 2 cut(s) 388, 1451
PspCI CACGTG 1 cut(s) 1754
PspEI GGTNACC 1 cut(s) 109
PspGI CCWGG 2 cut(s) 388, 1451
PspN4I GGNNCC 3 cut(s) 256, 394, 762
PspPI GGNCC 2 cut(s) 124, 341
PstI CTGCAG 1 cut(s) 1476
PsuI RGATCY 3 cut(s) 10, 577, 631
PvuI CGATCG 1 cut(s) 24
RgaI GCGATCGC 1 cut(s) 24
RsaI GTAC 4 cut(s) 256, 911, 1033, 1150
RsaNI GTAC 4 cut(s) 255, 910, 1032, 1149
RseI CAYNNNNRTG 2 cut(s) 58, 839
SacI GAGCTC 1 cut(s) 1644
SalI GTCGAC 1 cut(s) 1100
SaqAI TTAA 3 cut(s) 570, 1277, 1485
SatI GCNGC 3 cut(s) 27, 1472, 1746
Sau3AI GATC 6 cut(s) 10, 21, 577, 631, 794, 878
Sau96I GGNCC 2 cut(s) 124, 341
SchI GAGTC 3 cut(s) 652, 686, 970
ScrFI CCNGG 4 cut(s) 259, 390, 738, 1453
SduI GDGCHC 2 cut(s) 1644, 1652
SfaAI GCGATCGC 1 cut(s) 24
SfaNI GCATC 2 cut(s) 739, 1276
SfcI CTRYAG 2 cut(s) 1090, 1472
SfoI GGCGCC 1 cut(s) 762
SfuI TTCGAA 1 cut(s) 1391
SgfI GCGATCGC 1 cut(s) 24
SinI GGWCC 2 cut(s) 124, 341
SmiMI CAYNNNNRTG 2 cut(s) 58, 839
SsiI CCGC 5 cut(s) 18, 27, 153, 779, 1167
SspDI GGCGCC 1 cut(s) 760
SspMI CTAG 2 cut(s) 636, 1566
SstI GAGCTC 1 cut(s) 1644
StyD4I CCNGG 4 cut(s) 257, 388, 736, 1451
StyI CCWWGG 2 cut(s) 434, 635
TaaI ACNGT 1 cut(s) 1330
TaiI ACGT 3 cut(s) 1677, 1756, 1768
TaqI TCGA 4 cut(s) 99, 964, 1101, 1391
TatI WGTACW 1 cut(s) 909
TauI GCSGC 1 cut(s) 29
TfiI GAWTC 5 cut(s) 229, 494, 593, 848, 1733
Tru1I TTAA 3 cut(s) 570, 1277, 1485
Tru9I TTAA 3 cut(s) 570, 1277, 1485
TscAI CASTG 4 cut(s) 143, 484, 630, 685
TseFI GTSAC 4 cut(s) 109, 980, 1124, 1455
TseI GCWGC 2 cut(s) 1471, 1745
Tsp45I GTSAC 4 cut(s) 109, 980, 1124, 1455
TspDTI ATGAA 7 cut(s) 322, 528, 1041, 1227, 1268, 1563, 1797
TspGWI ACGGA 1 cut(s) 1709
TspRI CASTG 4 cut(s) 143, 484, 630, 685
Van91I CCANNNNNTGG 1 cut(s) 625
VpaK11BI GGWCC 2 cut(s) 124, 341
VspI ATTAAT 1 cut(s) 570
XagI CCTNNNNNAGG 1 cut(s) 856
XapI RAATTY 3 cut(s) 80, 517, 1550
XceI RCATGY 2 cut(s) 212, 728
XmaJI CCTAGG 1 cut(s) 635
XmiI GTMKAC 1 cut(s) 1101
XmnI GAANNNNTTC 2 cut(s) 535, 1715
XspI CTAG 2 cut(s) 636, 1566
Zsp2I ATGCAT 2 cut(s) 1291, 1546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.