high affinity nitrate transporter
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G12940 |
| fragaria_vesca | FvH4_4g25770 FvH4_4g25780 |
| malus_domestica | MD13G1096700.v1.1 |
| prunus_persica | Prupe.1G249000_v2.0.a1 |
| pyrus_communis | pycom13g08430 |
| rosa_chinensis | RchiOBHm_Chr2g0144671 RchiOBHm_Chr4g0433231 RchiOBHm_Chr4g0433241 |
| rosa_laevigata | RLG00000006772 RLG00000006773 RLG00000020099 |
| rosa_multiflora | Rmu_sc0000957.1_g000005 Rmu_sc0001623.1_g000001 Rmu_ssc0000295.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00374770 Rroxscaffold_5G00374790 |
| rosa_rugosa | Rorug02G0388600 Rorug04G0267000 Rorug04G0267100 |
| rosa_samantha | Rh2BG450900 Rh2DG460900 Rh4AG321600 Rh4AG321800 Rh4BG328700 Rh4CG344100 Rh4DG325400 Rh4DG325900 |
| rosa_wichuraiana | Rw2G036030 Rw4G027850 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 1114 |
| AccB1I | GGYRCC | 1 cut(s) | 1114 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 432, 685 |
| AccII | CGCG | 2 cut(s) | 295, 1643 |
| AclI | AACGTT | 1 cut(s) | 561 |
| AclWI | GGATC | 2 cut(s) | 1209, 1222 |
| AcoI | YGGCCR | 2 cut(s) | 408, 894 |
| AcsI | RAATTY | 2 cut(s) | 5, 1421 |
| AcuI | CTGAAG | 3 cut(s) | 1061, 1365, 1371 |
| AcyI | GRCGYC | 2 cut(s) | 1530, 1560 |
| AdeI | CACNNNGTG | 1 cut(s) | 1142 |
| AfaI | GTAC | 2 cut(s) | 1116, 1361 |
| AflIII | ACRYGT | 1 cut(s) | 1365 |
| AgeI | ACCGGT | 1 cut(s) | 681 |
| AgsI | TTSAA | 4 cut(s) | 70, 554, 847, 1210 |
| AjiI | CACGTC | 1 cut(s) | 1547 |
| AjnI | CCWGG | 2 cut(s) | 1469, 1515 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1018, 1050 |
| AluBI | AGCT | 9 cut(s) | 116, 335, 441, 523, 802, 824, 856, 1176, 1575 |
| AluI | AGCT | 9 cut(s) | 116, 335, 441, 523, 802, 824, 856, 1176, 1575 |
| Alw21I | GWGCWC | 3 cut(s) | 443, 627, 804 |
| Alw26I | GTCTC | 6 cut(s) | 241, 302, 1517, 1537, 1537, 1609 |
| AlwI | GGATC | 2 cut(s) | 1209, 1222 |
| AoxI | GGCC | 4 cut(s) | 354, 408, 894, 1629 |
| ApeKI | GCWGC | 5 cut(s) | 158, 520, 569, 988, 1269 |
| ApoI | RAATTY | 2 cut(s) | 5, 1421 |
| AsiGI | ACCGGT | 1 cut(s) | 681 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 229 |
| Asp718I | GGTACC | 1 cut(s) | 1114 |
| AspLEI | GCGC | 1 cut(s) | 245 |
| AspS9I | GGNCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| AsuC2I | CCSGG | 1 cut(s) | 182 |
| AsuHPI | GGTGA | 5 cut(s) | 136, 190, 316, 710, 1482 |
| AsuII | TTCGAA | 1 cut(s) | 1226 |
| AvaII | GGWCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| BalI | TGGCCA | 2 cut(s) | 410, 896 |
| BamHI | GGATCC | 1 cut(s) | 1214 |
| BanI | GGYRCC | 1 cut(s) | 1114 |
| BanII | GRGCYC | 2 cut(s) | 443, 804 |
| BbsI | GAAGAC | 1 cut(s) | 331 |
| Bbv12I | GWGCWC | 3 cut(s) | 443, 627, 804 |
| BbvI | GCAGC | 5 cut(s) | 170, 532, 556, 975, 1256 |
| BccI | CCATC | 3 cut(s) | 934, 1336, 1663 |
| BceAI | ACGGC | 1 cut(s) | 486 |
| BciT130I | CCWGG | 2 cut(s) | 1471, 1517 |
| BclI | TGATCA | 3 cut(s) | 49, 525, 1260 |
| BcnI | CCSGG | 1 cut(s) | 182 |
| BcoDI | GTCTC | 6 cut(s) | 241, 302, 1517, 1537, 1537, 1609 |
| BfaI | CTAG | 3 cut(s) | 909, 1139, 1509 |
| BfmI | CTRYAG | 2 cut(s) | 609, 864 |
| BlpI | GCTNAGC | 1 cut(s) | 1576 |
| BmcAI | AGTACT | 1 cut(s) | 1361 |
| Bme1390I | CCNGG | 3 cut(s) | 182, 1471, 1517 |
| Bme18I | GGWCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| BmgBI | CACGTC | 1 cut(s) | 1547 |
| BmgT120I | GGNCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| BmiI | GGNNCC | 2 cut(s) | 1116, 1216 |
| BmrFI | CCNGG | 3 cut(s) | 182, 1471, 1517 |
| BmsI | GCATC | 1 cut(s) | 408 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1509 |
| BpiI | GAAGAC | 1 cut(s) | 331 |
| BpmI | CTGGAG | 2 cut(s) | 441, 1499 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1576 |
| Bpu14I | TTCGAA | 1 cut(s) | 1226 |
| BpuEI | CTTGAG | 1 cut(s) | 836 |
| BpuMI | CCSGG | 1 cut(s) | 182 |
| BsaHI | GRCGYC | 2 cut(s) | 1530, 1560 |
| BsaI | GGTCTC | 2 cut(s) | 241, 1609 |
| BsaWI | WCCGGW | 2 cut(s) | 681, 695 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 153, 183, 1018, 1048 |
| Bse118I | RCCGGY | 2 cut(s) | 485, 681 |
| Bse1I | ACTGG | 2 cut(s) | 10, 458 |
| Bse3DI | GCAATG | 2 cut(s) | 270, 1310 |
| BseBI | CCWGG | 2 cut(s) | 1471, 1517 |
| BseGI | GGATG | 3 cut(s) | 359, 441, 963 |
| BseMI | GCAATG | 2 cut(s) | 270, 1310 |
| BseMII | CTCAG | 3 cut(s) | 1310, 1419, 1569 |
| BseNI | ACTGG | 2 cut(s) | 10, 458 |
| BseRI | GAGGAG | 3 cut(s) | 311, 961, 1370 |
| BseXI | GCAGC | 5 cut(s) | 170, 532, 556, 975, 1256 |
| BsgI | GTGCAG | 2 cut(s) | 1203, 1255 |
| Bsh1236I | CGCG | 2 cut(s) | 295, 1643 |
| BshFI | GGCC | 4 cut(s) | 356, 410, 896, 1631 |
| BshNI | GGYRCC | 1 cut(s) | 1114 |
| BshTI | ACCGGT | 1 cut(s) | 681 |
| BsiHKAI | GWGCWC | 3 cut(s) | 443, 627, 804 |
| BsiSI | CCGG | 7 cut(s) | 181, 222, 240, 486, 665, 682, 696 |
| BslFI | GGGAC | 3 cut(s) | 4, 197, 283 |
| BsmAI | GTCTC | 6 cut(s) | 241, 302, 1517, 1537, 1537, 1609 |
| BsmBI | CGTCTC | 3 cut(s) | 302, 1537, 1537 |
| BsmFI | GGGAC | 3 cut(s) | 4, 197, 283 |
| BsmI | GAATGC | 1 cut(s) | 1320 |
| BsnI | GGCC | 4 cut(s) | 356, 410, 896, 1631 |
| Bso31I | GGTCTC | 2 cut(s) | 241, 1609 |
| Bsp119I | TTCGAA | 1 cut(s) | 1226 |
| Bsp1286I | GDGCHC | 3 cut(s) | 443, 627, 804 |
| Bsp143I | GATC | 5 cut(s) | 49, 525, 1214, 1260, 1497 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1576 |
| BspANI | GGCC | 4 cut(s) | 356, 410, 896, 1631 |
| BspCNI | CTCAG | 3 cut(s) | 1311, 1420, 1568 |
| BspFNI | CGCG | 2 cut(s) | 295, 1643 |
| BspHI | TCATGA | 1 cut(s) | 1257 |
| BspLI | GGNNCC | 2 cut(s) | 1116, 1216 |
| BspMAI | CTGCAG | 2 cut(s) | 613, 868 |
| BspPI | GGATC | 2 cut(s) | 1209, 1222 |
| BspQI | GCTCTTC | 1 cut(s) | 1665 |
| BspT104I | TTCGAA | 1 cut(s) | 1226 |
| BspT107I | GGYRCC | 1 cut(s) | 1114 |
| BspTNI | GGTCTC | 2 cut(s) | 241, 1609 |
| BsrDI | GCAATG | 2 cut(s) | 270, 1310 |
| BsrFI | RCCGGY | 2 cut(s) | 485, 681 |
| BsrI | ACTGG | 2 cut(s) | 10, 458 |
| BssAI | RCCGGY | 2 cut(s) | 485, 681 |
| BssMI | GATC | 5 cut(s) | 49, 525, 1214, 1260, 1497 |
| BssNI | GRCGYC | 2 cut(s) | 1530, 1560 |
| Bst2UI | CCWGG | 2 cut(s) | 1471, 1517 |
| Bst4CI | ACNGT | 4 cut(s) | 671, 727, 808, 1627 |
| Bst6I | CTCTTC | 3 cut(s) | 383, 1347, 1665 |
| BstACI | GRCGYC | 2 cut(s) | 1530, 1560 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 251, 661 |
| BstBI | TTCGAA | 1 cut(s) | 1226 |
| BstC8I | GCNNGC | 2 cut(s) | 102, 487 |
| BstDEI | CTNAG | 5 cut(s) | 112, 1319, 1428, 1555, 1576 |
| BstF5I | GGATG | 3 cut(s) | 359, 441, 963 |
| BstFNI | CGCG | 2 cut(s) | 295, 1643 |
| BstHHI | GCGC | 1 cut(s) | 245 |
| BstKTI | GATC | 5 cut(s) | 52, 528, 1217, 1263, 1500 |
| BstMAI | GTCTC | 6 cut(s) | 241, 302, 1517, 1537, 1537, 1609 |
| BstMBI | GATC | 5 cut(s) | 49, 525, 1214, 1260, 1497 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 227, 251, 260, 486, 529, 652, 661, 1586, 1637 |
| BstNI | CCWGG | 2 cut(s) | 1471, 1517 |
| BstNSI | RCATGY | 2 cut(s) | 100, 1369 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1509 |
| BstSCI | CCNGG | 3 cut(s) | 180, 1469, 1515 |
| BstSFI | CTRYAG | 2 cut(s) | 609, 864 |
| BstUI | CGCG | 2 cut(s) | 295, 1643 |
| BstV1I | GCAGC | 5 cut(s) | 170, 532, 556, 975, 1256 |
| BstV2I | GAAGAC | 1 cut(s) | 331 |
| BstX2I | RGATCY | 1 cut(s) | 1214 |
| BstYI | RGATCY | 1 cut(s) | 1214 |
| BsuRI | GGCC | 4 cut(s) | 356, 410, 896, 1631 |
| BtrI | CACGTC | 1 cut(s) | 1547 |
| BtsCI | GGATG | 3 cut(s) | 359, 441, 963 |
| BtsI | GCAGTG | 4 cut(s) | 579, 618, 861, 1341 |
| BtsIMutI | CAGTG | 8 cut(s) | 465, 579, 618, 804, 861, 1341, 1347, 1389 |
| Cac8I | GCNNGC | 2 cut(s) | 102, 487 |
| CciI | TCATGA | 1 cut(s) | 1257 |
| CfoI | GCGC | 1 cut(s) | 245 |
| Cfr10I | RCCGGY | 2 cut(s) | 485, 681 |
| Cfr13I | GGNCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| CpoI | CGGWCCG | 1 cut(s) | 290 |
| CseI | GACGC | 7 cut(s) | 284, 382, 526, 1514, 1519, 1549, 1595 |
| Csp6I | GTAC | 2 cut(s) | 1115, 1360 |
| CspAI | ACCGGT | 1 cut(s) | 681 |
| CspI | CGGWCCG | 1 cut(s) | 290 |
| CviAII | CATG | 8 cut(s) | 97, 135, 427, 529, 737, 1060, 1258, 1366 |
| CviQI | GTAC | 2 cut(s) | 1115, 1360 |
| DdeI | CTNAG | 5 cut(s) | 112, 1319, 1428, 1555, 1576 |
| DpnI | GATC | 5 cut(s) | 51, 527, 1216, 1262, 1499 |
| DpnII | GATC | 5 cut(s) | 49, 525, 1214, 1260, 1497 |
| DraIII | CACNNNGTG | 1 cut(s) | 1142 |
| EaeI | YGGCCR | 2 cut(s) | 408, 894 |
| Eam1104I | CTCTTC | 3 cut(s) | 383, 1347, 1665 |
| EarI | CTCTTC | 3 cut(s) | 383, 1347, 1665 |
| EciI | GGCGGA | 1 cut(s) | 1624 |
| Ecl136II | GAGCTC | 2 cut(s) | 441, 802 |
| Eco24I | GRGCYC | 2 cut(s) | 443, 804 |
| Eco31I | GGTCTC | 2 cut(s) | 241, 1609 |
| Eco47I | GGWCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| Eco53kI | GAGCTC | 2 cut(s) | 441, 802 |
| Eco57I | CTGAAG | 3 cut(s) | 1061, 1365, 1371 |
| EcoICRI | GAGCTC | 2 cut(s) | 441, 802 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1473 |
| EcoRI | GAATTC | 1 cut(s) | 5 |
| EcoRII | CCWGG | 2 cut(s) | 1469, 1515 |
| EcoT38I | GRGCYC | 2 cut(s) | 443, 804 |
| Esp3I | CGTCTC | 3 cut(s) | 302, 1537, 1537 |
| FaeI | CATG | 8 cut(s) | 100, 138, 430, 532, 740, 1063, 1261, 1369 |
| FaqI | GGGAC | 3 cut(s) | 4, 197, 283 |
| FatI | CATG | 8 cut(s) | 96, 134, 426, 528, 736, 1059, 1257, 1365 |
| FauI | CCCGC | 1 cut(s) | 1308 |
| FauNDI | CATATG | 2 cut(s) | 1105, 1265 |
| FbaI | TGATCA | 3 cut(s) | 49, 525, 1260 |
| FokI | GGATG | 3 cut(s) | 346, 448, 970 |
| FriOI | GRGCYC | 2 cut(s) | 443, 804 |
| FspBI | CTAG | 3 cut(s) | 909, 1139, 1509 |
| GlaI | GCGC | 1 cut(s) | 244 |
| GsuI | CTGGAG | 2 cut(s) | 441, 1499 |
| HaeIII | GGCC | 4 cut(s) | 356, 410, 896, 1631 |
| HapII | CCGG | 7 cut(s) | 181, 222, 240, 486, 665, 682, 696 |
| HgaI | GACGC | 7 cut(s) | 284, 382, 526, 1514, 1519, 1549, 1595 |
| HhaI | GCGC | 1 cut(s) | 245 |
| Hin1I | GRCGYC | 2 cut(s) | 1530, 1560 |
| Hin1II | CATG | 8 cut(s) | 100, 138, 430, 532, 740, 1063, 1261, 1369 |
| Hin6I | GCGC | 1 cut(s) | 243 |
| HinP1I | GCGC | 1 cut(s) | 243 |
| HindIII | AAGCTT | 2 cut(s) | 854, 1174 |
| HpaII | CCGG | 7 cut(s) | 181, 222, 240, 486, 665, 682, 696 |
| HphI | GGTGA | 5 cut(s) | 136, 190, 316, 710, 1482 |
| Hpy166II | GTNNAC | 4 cut(s) | 43, 579, 811, 975 |
| Hpy188III | TCNNGA | 4 cut(s) | 433, 909, 1128, 1258 |
| Hpy8I | GTNNAC | 4 cut(s) | 43, 579, 811, 975 |
| Hpy99I | CGWCG | 3 cut(s) | 398, 520, 1508 |
| HpyAV | CCTTC | 3 cut(s) | 1036, 1125, 1384 |
| HpyCH4III | ACNGT | 4 cut(s) | 671, 727, 808, 1627 |
| HpyCH4IV | ACGT | 2 cut(s) | 561, 1546 |
| HpyCH4V | TGCA | 7 cut(s) | 611, 866, 991, 1184, 1272, 1412, 1550 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 227, 251, 260, 486, 529, 652, 661, 1586, 1637 |
| HpyF3I | CTNAG | 5 cut(s) | 112, 1319, 1428, 1555, 1576 |
| HpySE526I | ACGT | 2 cut(s) | 561, 1546 |
| Hsp92I | GRCGYC | 2 cut(s) | 1530, 1560 |
| Hsp92II | CATG | 8 cut(s) | 100, 138, 430, 532, 740, 1063, 1261, 1369 |
| HspAI | GCGC | 1 cut(s) | 243 |
| KpnI | GGTACC | 1 cut(s) | 1118 |
| KroI | GCCGGC | 1 cut(s) | 485 |
| KroNI | GCCGGC | 1 cut(s) | 487 |
| Ksp22I | TGATCA | 3 cut(s) | 49, 525, 1260 |
| Kzo9I | GATC | 5 cut(s) | 49, 525, 1214, 1260, 1497 |
| LguI | GCTCTTC | 1 cut(s) | 1665 |
| LmnI | GCTCC | 1 cut(s) | 1572 |
| Lsp1109I | GCAGC | 5 cut(s) | 170, 532, 556, 975, 1256 |
| LweI | GCATC | 1 cut(s) | 408 |
| MaeI | CTAG | 3 cut(s) | 909, 1139, 1509 |
| MaeII | ACGT | 2 cut(s) | 561, 1546 |
| MaeIII | GTNAC | 3 cut(s) | 671, 698, 1134 |
| MalI | GATC | 5 cut(s) | 51, 527, 1216, 1262, 1499 |
| MboI | GATC | 5 cut(s) | 49, 525, 1214, 1260, 1497 |
| MboII | GAAGA | 7 cut(s) | 67, 331, 370, 1198, 1364, 1492, 1652 |
| MflI | RGATCY | 1 cut(s) | 1214 |
| MhlI | GDGCHC | 3 cut(s) | 443, 627, 804 |
| MlsI | TGGCCA | 2 cut(s) | 410, 896 |
| MluCI | AATT | 3 cut(s) | 5, 748, 1421 |
| MluNI | TGGCCA | 2 cut(s) | 410, 896 |
| MlyI | GAGTC | 7 cut(s) | 26, 38, 265, 970, 1279, 1454, 1624 |
| MmeI | TCCRAC | 3 cut(s) | 303, 446, 666 |
| Mox20I | TGGCCA | 2 cut(s) | 410, 896 |
| MroNI | GCCGGC | 1 cut(s) | 485 |
| MroXI | GAANNNNTTC | 1 cut(s) | 229 |
| MscI | TGGCCA | 2 cut(s) | 410, 896 |
| MseI | TTAA | 2 cut(s) | 744, 1466 |
| Msp20I | TGGCCA | 2 cut(s) | 410, 896 |
| MspA1I | CMGCKG | 2 cut(s) | 335, 523 |
| MspI | CCGG | 7 cut(s) | 181, 222, 240, 486, 665, 682, 696 |
| MspR9I | CCNGG | 3 cut(s) | 182, 1471, 1517 |
| Mva1269I | GAATGC | 1 cut(s) | 1320 |
| MvaI | CCWGG | 2 cut(s) | 1471, 1517 |
| MvnI | CGCG | 2 cut(s) | 295, 1643 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 227, 251, 260, 486, 529, 652, 661, 1586, 1637 |
| NaeI | GCCGGC | 1 cut(s) | 487 |
| NciI | CCSGG | 1 cut(s) | 182 |
| NdeI | CATATG | 2 cut(s) | 1105, 1265 |
| NdeII | GATC | 5 cut(s) | 49, 525, 1214, 1260, 1497 |
| NgoMIV | GCCGGC | 1 cut(s) | 485 |
| NlaIII | CATG | 8 cut(s) | 100, 138, 430, 532, 740, 1063, 1261, 1369 |
| NlaIV | GGNNCC | 2 cut(s) | 1116, 1216 |
| NmuCI | GTSAC | 2 cut(s) | 698, 1134 |
| NspI | RCATGY | 2 cut(s) | 100, 1369 |
| NspV | TTCGAA | 1 cut(s) | 1226 |
| PagI | TCATGA | 1 cut(s) | 1257 |
| PciI | ACATGT | 1 cut(s) | 1365 |
| PciSI | GCTCTTC | 1 cut(s) | 1665 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1527 |
| PctI | GAATGC | 1 cut(s) | 1320 |
| PdiI | GCCGGC | 1 cut(s) | 487 |
| PdmI | GAANNNNTTC | 1 cut(s) | 229 |
| PfeI | GAWTC | 4 cut(s) | 225, 763, 843, 1018 |
| PflFI | GACNNNGTC | 1 cut(s) | 294 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 432, 685 |
| PfoI | TCCNGGA | 1 cut(s) | 180 |
| PinAI | ACCGGT | 1 cut(s) | 681 |
| PleI | GAGTC | 7 cut(s) | 25, 38, 265, 970, 1279, 1454, 1623 |
| PpsI | GAGTC | 7 cut(s) | 25, 38, 265, 970, 1279, 1454, 1623 |
| PpuMI | RGGWCCY | 1 cut(s) | 1473 |
| PscI | ACATGT | 1 cut(s) | 1365 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1509 |
| Psp124BI | GAGCTC | 2 cut(s) | 443, 804 |
| Psp1406I | AACGTT | 1 cut(s) | 561 |
| Psp5II | RGGWCCY | 1 cut(s) | 1473 |
| Psp6I | CCWGG | 2 cut(s) | 1469, 1515 |
| PspGI | CCWGG | 2 cut(s) | 1469, 1515 |
| PspN4I | GGNNCC | 2 cut(s) | 1116, 1216 |
| PspPI | GGNCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| PspPPI | RGGWCCY | 1 cut(s) | 1473 |
| PstI | CTGCAG | 2 cut(s) | 613, 868 |
| PsuI | RGATCY | 1 cut(s) | 1214 |
| PsyI | GACNNNGTC | 1 cut(s) | 294 |
| PvuII | CAGCTG | 2 cut(s) | 335, 523 |
| RsaI | GTAC | 2 cut(s) | 1116, 1361 |
| RsaNI | GTAC | 2 cut(s) | 1115, 1360 |
| Rsr2I | CGGWCCG | 1 cut(s) | 290 |
| RsrII | CGGWCCG | 1 cut(s) | 290 |
| SacI | GAGCTC | 2 cut(s) | 443, 804 |
| SapI | GCTCTTC | 1 cut(s) | 1665 |
| SaqAI | TTAA | 2 cut(s) | 744, 1466 |
| Sau3AI | GATC | 5 cut(s) | 49, 525, 1214, 1260, 1497 |
| Sau96I | GGNCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| ScaI | AGTACT | 1 cut(s) | 1361 |
| SchI | GAGTC | 7 cut(s) | 26, 38, 265, 970, 1279, 1454, 1624 |
| ScrFI | CCNGG | 3 cut(s) | 182, 1471, 1517 |
| SduI | GDGCHC | 3 cut(s) | 443, 627, 804 |
| SfaNI | GCATC | 1 cut(s) | 408 |
| SfcI | CTRYAG | 2 cut(s) | 609, 864 |
| SfuI | TTCGAA | 1 cut(s) | 1226 |
| SinI | GGWCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| SmlI | CTYRAG | 1 cut(s) | 851 |
| SmoI | CTYRAG | 1 cut(s) | 851 |
| Sse9I | AATT | 3 cut(s) | 5, 748, 1421 |
| SspI | AATATT | 1 cut(s) | 901 |
| SspMI | CTAG | 3 cut(s) | 909, 1139, 1509 |
| SstI | GAGCTC | 2 cut(s) | 443, 804 |
| StyD4I | CCNGG | 3 cut(s) | 180, 1469, 1515 |
| TaaI | ACNGT | 4 cut(s) | 671, 727, 808, 1627 |
| TaiI | ACGT | 2 cut(s) | 564, 1549 |
| TaqI | TCGA | 3 cut(s) | 722, 1226, 1503 |
| TaqII | GACCGA | 3 cut(s) | 223, 928, 1689 |
| TasI | AATT | 3 cut(s) | 5, 748, 1421 |
| TatI | WGTACW | 1 cut(s) | 1359 |
| TauI | GCSGC | 5 cut(s) | 158, 881, 1583, 1640, 1643 |
| TfiI | GAWTC | 4 cut(s) | 225, 763, 843, 1018 |
| Tru1I | TTAA | 2 cut(s) | 744, 1466 |
| Tru9I | TTAA | 2 cut(s) | 744, 1466 |
| TscAI | CASTG | 8 cut(s) | 465, 586, 618, 811, 868, 1348, 1354, 1389 |
| TseFI | GTSAC | 2 cut(s) | 698, 1134 |
| TseI | GCWGC | 5 cut(s) | 158, 520, 569, 988, 1269 |
| Tsp45I | GTSAC | 2 cut(s) | 698, 1134 |
| TspDTI | ATGAA | 1 cut(s) | 1394 |
| TspRI | CASTG | 8 cut(s) | 465, 586, 618, 811, 868, 1348, 1354, 1389 |
| Tth111I | GACNNNGTC | 1 cut(s) | 294 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 432, 685 |
| VpaK11BI | GGWCC | 4 cut(s) | 290, 1325, 1473, 1672 |
| XapI | RAATTY | 2 cut(s) | 5, 1421 |
| XbaI | TCTAGA | 1 cut(s) | 908 |
| XceI | RCATGY | 2 cut(s) | 100, 1369 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 429, 1091, 1523 |
| XmnI | GAANNNNTTC | 1 cut(s) | 229 |
| XspI | CTAG | 3 cut(s) | 909, 1139, 1509 |
| ZrmI | AGTACT | 1 cut(s) | 1361 |