Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0005098

Physical Location & Seq

Genomic Coordinates Reverse (-)

43949191 .. 43950907

Gene Structure 1717 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0267000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1689 bp

ATGCAATCAGTAAGACTTCCTATGTCCATTTGTAATACTCTTGATCGATTGAACATGAACTTCCTATGGGGGCACACTGAAGAACAAAAGAAAATCCATCTAGTGAAGTGGGATACGGTCTGTAAACCCAAATGTTATGGTGGGTTGGGATTGAAGAAGACATGTATGATGAATCAGGCCTTGTTAGCCAAAACAGGATGGAGACTTCTTCAACAGGAACAAGGGTTGTGGGCTCAAGCTTTGAATAAAAAATACCTCAAAGATGATTGCATTATGCAGAAGCTAACATCTCCTTTCCCTTCTAGCTCTAGTACATGGAAAGGCATCCTTTATGGAGCTCAACTGCTCCCTGAGGGATCTAAGTGGAGGATTGGATCCGGTACGCAAATTTCCTTCTGGAATGATAATTGGACAGGTCTTGGTGTTTTGTCTGCTATTGCCTTGAAGCCTATTCCTCCCAACCTCGAAGGGCTAAGAGTGTGTGATGTTCACGGTGATGGTGGATGGGATTTACACCGGGTGCAAGAATTTTTATCTGAGGATGTGAAATTAAAAATTTTGAGTCTGCATGCAGGAGGTACTCGTAGTGGTGATGACACGATCATATGGAGGTTATCTCAGAATGGTAACTTTTCTGTTAAATCTGCTTATCATTCTTTGTTTTTGAACTTGGATCCTCAACCATGGCCATGGAACTTTATTTGGAAGATTCAAGTCCCTCCTAAGGTGAAAACCTTTTTATGGACTCTTGTGCATGATAGATTGCTAACAAATGACGTGAGGTTTCGTAGAGGTCTGGCTATAGATACTCGTTGTCCAAGATGCGGCTCCCCGCTTGAATCCTTGGACCATCTTTTCAGAGACTGCACTATTTCTATGAGAATTTGGACTGCCCTCCACCCCACAAGTGAGTTCTCCTCCACTTACACTCTTCCCTTTAATGATTGGTTGCTTATCAATTTAAAGTCCCCTGCGAGACTGCAATATGCAGTGCCTTGGTGTTGCTATTTTGCTATGGGGCTTTGGTATATATGGAAATGGAGGTGTAGCATCATCTTGGATCATACTTTTAAATTTCCATTTTGGCCTTCTCTAATTATTCATCAGTCTACCAGAGAATTTTTTGAAGCAAATATGATTACACATGCTAAACCTCCAAGACAGGTGGCTCAGCTGTGTTGGCATTTTCCGCCTAAGGATTGGCTCAAGTTAAATGTTGATGGTAGTTTGCATAAAAATACTGGGATTATATGTGCTGGAGGAGCCCTTCGAAATGATAGGGGGGAATGGATGAATGGGTTTTCTGCCAAGTTGGGCATTGGTCAAGTTATTGAAGCTGAACTTTGGGGACTTCTGAAAGGAATGGAAATGGCTTGGCAGAATGGCTGTAGACGTTTGAAAATAGAAATGGATTCACTTGTTGCGGTAAAGTTGGTTCTCTCTCCCATTGCTCATCTCCACCCTCTTTATAGTATTGTGGCAAACTGTCAAGAGCTTTTGAGTAGGGTTTGGAATGTGTCCCTTAAACATGTTTACAGAGAGTGTAATTCAGTGGCTGATTTGTTAGCGAATATTGGGCATGGTTATGAACCTGGCTGCAGATTCTTTAGCTCCCCTCCTATTGATGTCGTGCCTCTTCTGGAAGCTGACCTTTTGGGCTTGTCTAAGCCAAGATTAATTGTGTTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000325 GO:0001101 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0008150 GO:0008509 GO:0009705 GO:0009987 GO:0010035 GO:0010167 GO:0015075 GO:0015103 GO:0015112 GO:0015318 GO:0015698 GO:0015706 GO:0016020 GO:0022857 GO:0031090 GO:0034220 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055085 GO:0070887 GO:0071229 GO:0071241 GO:0071249 GO:0071705 GO:0071944 GO:0098588 GO:0098656 GO:0098805 GO:1901698 GO:1901699 GO:1901700 GO:1901701 GO:1902170

KEGG Pathways

Metabolic & Signaling

ko00910 map00910

Pfam Domains

Protein Families

MFS_1

Protein Analysis

562

Amino Acids

64.25

Weight (kDa)

9.1

Isoelectric Point (pI)

33.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RVT	PF13966	211 - 296	5.4e-23	zinc-binding in reverse transcriptase
RVT_3	PF13456	405 - 524	5.2e-25	Reverse transcriptase-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005098)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G12940
fragaria_vesca	FvH4_4g25770 FvH4_4g25780
malus_domestica	MD13G1096700.v1.1
prunus_persica	Prupe.1G249000_v2.0.a1
pyrus_communis	pycom13g08430
rosa_chinensis	RchiOBHm_Chr2g0144671 RchiOBHm_Chr4g0433231 RchiOBHm_Chr4g0433241
rosa_laevigata	RLG00000006772 RLG00000006773 RLG00000020099
rosa_multiflora	Rmu_sc0000957.1_g000005 Rmu_sc0001623.1_g000001 Rmu_ssc0000295.1_g000002
rosa_roxburghii	Rroxscaffold_5G00374770 Rroxscaffold_5G00374790
rosa_rugosa	Rorug02G0388600 Rorug04G0267000 Rorug04G0267100
rosa_samantha	Rh2BG450900 Rh2DG460900 Rh4AG321600 Rh4AG321800 Rh4BG328700 Rh4CG344100 Rh4DG325400 Rh4DG325900
rosa_wichuraiana	Rw2G036030 Rw4G027850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	1109, 1390
AciI	CCGC	4 cut(s)	825, 833, 1190, 1424
AclWI	GGATC	6 cut(s)	364, 369, 382, 668, 681, 1068
AcoI	YGGCCR	1 cut(s)	686
AcsI	RAATTY	6 cut(s)	387, 527, 555, 882, 1073, 1118
AcuI	CTGAAG	1 cut(s)	99
AdeI	CACNNNGTG	1 cut(s)	520
AfaI	GTAC	3 cut(s)	313, 382, 580
AfiI	CCNNNNNNNGG	3 cut(s)	724, 741, 824
AflIII	ACRYGT	2 cut(s)	161, 1528
AjiI	CACGTC	1 cut(s)	778
AjnI	CCWGG	1 cut(s)	1591
AluBI	AGCT	9 cut(s)	239, 283, 306, 338, 1174, 1337, 1495, 1611, 1646
AluI	AGCT	9 cut(s)	239, 283, 306, 338, 1174, 1337, 1495, 1611, 1646
Alw21I	GWGCWC	1 cut(s)	340
Alw26I	GTCTC	3 cut(s)	196, 855, 970
AlwI	GGATC	6 cut(s)	364, 369, 382, 668, 681, 1068
AlwNI	CAGNNNCTG	2 cut(s)	864, 1556
AoxI	GGCC	3 cut(s)	177, 686, 1085
ApeKI	GCWGC	1 cut(s)	1596
ApoI	RAATTY	6 cut(s)	387, 527, 555, 882, 1073, 1118
AseI	ATTAAT	1 cut(s)	1676
AspS9I	GGNCC	1 cut(s)	847
AsuC2I	CCSGG	1 cut(s)	518
AsuHPI	GGTGA	3 cut(s)	506, 602, 739
AsuII	TTCGAA	1 cut(s)	1270
AvaII	GGWCC	1 cut(s)	847
AxyI	CCTNAGG	3 cut(s)	351, 723, 1194
BaeGI	GKGCMC	1 cut(s)	75
BalI	TGGCCA	1 cut(s)	688
BamHI	GGATCC	2 cut(s)	374, 673
BanII	GRGCYC	3 cut(s)	235, 340, 1267
BbsI	GAAGAC	1 cut(s)	164
Bbv12I	GWGCWC	1 cut(s)	340
BbvI	GCAGC	1 cut(s)	1583
BccI	CCATC	6 cut(s)	105, 192, 491, 498, 858, 1214
BciT130I	CCWGG	1 cut(s)	1593
BciVI	GTATCC	1 cut(s)	106
BcnI	CCSGG	1 cut(s)	518
BcoDI	GTCTC	3 cut(s)	196, 855, 970
BfaI	CTAG	3 cut(s)	101, 303, 309
BfmI	CTRYAG	3 cut(s)	801, 1387, 1597
BfuI	GTATCC	1 cut(s)	106
BisI	GCNGC	2 cut(s)	826, 1597
BlpI	GCTNAGC	1 cut(s)	1170
BlsI	GCNGC	2 cut(s)	827, 1598
Bme1390I	CCNGG	2 cut(s)	518, 1593
Bme18I	GGWCC	1 cut(s)	847
BmgBI	CACGTC	1 cut(s)	778
BmgT120I	GGNCC	1 cut(s)	847
BmiI	GGNNCC	4 cut(s)	376, 675, 829, 1264
BmrFI	CCNGG	2 cut(s)	518, 1593
BmrI	ACTGGG	1 cut(s)	1251
BmsI	GCATC	3 cut(s)	333, 812, 1059
BmuI	ACTGGG	1 cut(s)	1251
BpiI	GAAGAC	1 cut(s)	164
BplI	GAGNNNNNCTC	4 cut(s)	601, 633, 902, 934
BpmI	CTGGAG	1 cut(s)	1278
Bpu1102I	GCTNAGC	1 cut(s)	1170
Bpu14I	TTCGAA	1 cut(s)	1270
BpuEI	CTTGAG	2 cut(s)	219, 1190
BpuMI	CCSGG	1 cut(s)	518
Bsa29I	ATCGAT	1 cut(s)	46
BsaJI	CCNNGG	4 cut(s)	683, 689, 843, 995
BsaWI	WCCGGW	1 cut(s)	377
Bsc4I	CCNNNNNNNGG	3 cut(s)	724, 741, 824
Bse1I	ACTGG	1 cut(s)	1246
Bse21I	CCTNAGG	3 cut(s)	351, 723, 1194
Bse3DI	GCAATG	1 cut(s)	1446
BseBI	CCWGG	1 cut(s)	1593
BseCI	ATCGAT	1 cut(s)	46
BseDI	CCNNGG	4 cut(s)	683, 689, 843, 995
BseGI	GGATG	5 cut(s)	203, 324, 509, 547, 1296
BseLI	CCNNNNNNNGG	3 cut(s)	724, 741, 824
BseMI	GCAATG	1 cut(s)	1446
BseMII	CTCAG	4 cut(s)	342, 528, 632, 1184
BseNI	ACTGG	1 cut(s)	1246
BseRI	GAGGAG	2 cut(s)	907, 1275
BseSI	GKGCMC	1 cut(s)	75
BseXI	GCAGC	1 cut(s)	1583
BsgI	GTGCAG	1 cut(s)	850
BshFI	GGCC	3 cut(s)	179, 688, 1087
BshVI	ATCGAT	1 cut(s)	46
BsiHKAI	GWGCWC	1 cut(s)	340
BsiSI	CCGG	2 cut(s)	378, 517
BslFI	GGGAC	4 cut(s)	701, 952, 1362, 1504
BslI	CCNNNNNNNGG	3 cut(s)	724, 741, 824
BsmAI	GTCTC	3 cut(s)	196, 855, 970
BsmFI	GGGAC	4 cut(s)	701, 952, 1362, 1504
BsnI	GGCC	3 cut(s)	179, 688, 1087
Bsp119I	TTCGAA	1 cut(s)	1270
Bsp1286I	GDGCHC	4 cut(s)	75, 235, 340, 1267
Bsp143I	GATC	6 cut(s)	43, 356, 374, 600, 673, 1060
Bsp1720I	GCTNAGC	1 cut(s)	1170
Bsp19I	CCATGG	2 cut(s)	683, 689
BspACI	CCGC	4 cut(s)	825, 833, 1190, 1424
BspANI	GGCC	3 cut(s)	179, 688, 1087
BspCNI	CTCAG	4 cut(s)	343, 529, 631, 1183
BspDI	ATCGAT	1 cut(s)	46
BspLI	GGNNCC	4 cut(s)	376, 675, 829, 1264
BspMAI	CTGCAG	1 cut(s)	1601
BspPI	GGATC	6 cut(s)	364, 369, 382, 668, 681, 1068
BspT104I	TTCGAA	1 cut(s)	1270
BsrDI	GCAATG	1 cut(s)	1446
BsrI	ACTGG	1 cut(s)	1246
BssECI	CCNNGG	4 cut(s)	683, 689, 843, 995
BssMI	GATC	6 cut(s)	43, 356, 374, 600, 673, 1060
BssT1I	CCWWGG	4 cut(s)	683, 689, 843, 995
Bst2UI	CCWGG	1 cut(s)	1593
Bst4CI	ACNGT	3 cut(s)	118, 494, 1487
Bst6I	CTCTTC	2 cut(s)	936, 1641
BstBI	TTCGAA	1 cut(s)	1270
BstC8I	GCNNGC	1 cut(s)	570
BstDEI	CTNAG	9 cut(s)	351, 360, 473, 537, 618, 723, 1170, 1194, 1665
BstDSI	CCRYGG	2 cut(s)	683, 689
BstF5I	GGATG	5 cut(s)	203, 324, 509, 547, 1296
BstKTI	GATC	6 cut(s)	46, 359, 377, 603, 676, 1063
BstMAI	GTCTC	3 cut(s)	196, 855, 970
BstMBI	GATC	6 cut(s)	43, 356, 374, 600, 673, 1060
BstMWI	GCNNNNNNNGC	4 cut(s)	185, 1180, 1189, 1262
BstNI	CCWGG	1 cut(s)	1593
BstNSI	RCATGY	4 cut(s)	165, 572, 1148, 1532
BstSCI	CCNGG	2 cut(s)	516, 1591
BstSFI	CTRYAG	3 cut(s)	801, 1387, 1597
BstSLI	GKGCMC	1 cut(s)	75
BstV1I	GCAGC	1 cut(s)	1583
BstV2I	GAAGAC	1 cut(s)	164
BstX2I	RGATCY	3 cut(s)	356, 374, 673
BstXI	CCANNNNNNTGG	1 cut(s)	690
BstYI	RGATCY	3 cut(s)	356, 374, 673
Bsu15I	ATCGAT	1 cut(s)	46
Bsu36I	CCTNAGG	3 cut(s)	351, 723, 1194
BsuI	GTATCC	1 cut(s)	106
BsuRI	GGCC	3 cut(s)	179, 688, 1087
BsuTUI	ATCGAT	1 cut(s)	46
BtgI	CCRYGG	2 cut(s)	683, 689
BtrI	CACGTC	1 cut(s)	778
BtsCI	GGATG	5 cut(s)	203, 324, 509, 547, 1296
BtsI	GCAGTG	1 cut(s)	996
BtsIMutI	CAGTG	3 cut(s)	75, 996, 1557
Cac8I	GCNNGC	1 cut(s)	570
CaiI	CAGNNNCTG	2 cut(s)	864, 1556
Cfr13I	GGNCC	1 cut(s)	847
ClaI	ATCGAT	1 cut(s)	46
Csp6I	GTAC	3 cut(s)	312, 381, 579
CspCI	CAANNNNNGTGG	4 cut(s)	209, 244, 1146, 1181
CviQI	GTAC	3 cut(s)	312, 381, 579
DdeI	CTNAG	9 cut(s)	351, 360, 473, 537, 618, 723, 1170, 1194, 1665
DpnI	GATC	6 cut(s)	45, 358, 376, 602, 675, 1062
DpnII	GATC	6 cut(s)	43, 356, 374, 600, 673, 1060
DraI	TTTAAA	2 cut(s)	963, 1072
DraIII	CACNNNGTG	1 cut(s)	520
EaeI	YGGCCR	1 cut(s)	686
Eam1104I	CTCTTC	2 cut(s)	936, 1641
EarI	CTCTTC	2 cut(s)	936, 1641
EciI	GGCGGA	1 cut(s)	1179
Ecl136II	GAGCTC	1 cut(s)	338
Eco130I	CCWWGG	4 cut(s)	683, 689, 843, 995
Eco147I	AGGCCT	1 cut(s)	179
Eco24I	GRGCYC	3 cut(s)	235, 340, 1267
Eco47I	GGWCC	1 cut(s)	847
Eco53kI	GAGCTC	1 cut(s)	338
Eco57I	CTGAAG	1 cut(s)	99
Eco81I	CCTNAGG	3 cut(s)	351, 723, 1194
EcoICRI	GAGCTC	1 cut(s)	338
EcoRII	CCWGG	1 cut(s)	1591
EcoT14I	CCWWGG	4 cut(s)	683, 689, 843, 995
EcoT38I	GRGCYC	3 cut(s)	235, 340, 1267
ErhI	CCWWGG	4 cut(s)	683, 689, 843, 995
FalI	AAGNNNNNCTT	6 cut(s)	312, 344, 1326, 1358, 1635, 1667
FaqI	GGGAC	4 cut(s)	701, 952, 1362, 1504
FauI	CCCGC	1 cut(s)	840
FauNDI	CATATG	1 cut(s)	605
FblI	GTMKAC	2 cut(s)	1109, 1390
Fnu4HI	GCNGC	2 cut(s)	826, 1597
FokI	GGATG	5 cut(s)	210, 311, 516, 554, 1303
FriOI	GRGCYC	3 cut(s)	235, 340, 1267
Fsp4HI	GCNGC	2 cut(s)	826, 1597
FspBI	CTAG	3 cut(s)	101, 303, 309
GluI	GCNGC	2 cut(s)	826, 1597
GsuI	CTGGAG	1 cut(s)	1278
HaeIII	GGCC	3 cut(s)	179, 688, 1087
HapII	CCGG	2 cut(s)	378, 517
HindIII	AAGCTT	1 cut(s)	237
HinfI	GANTC	7 cut(s)	172, 562, 709, 745, 839, 1412, 1602
HpaII	CCGG	2 cut(s)	378, 517
HphI	GGTGA	3 cut(s)	506, 602, 739
Hpy166II	GTNNAC	5 cut(s)	125, 490, 1110, 1391, 1534
Hpy188I	TCNGA	4 cut(s)	538, 621, 860, 1356
Hpy188III	TCNNGA	4 cut(s)	41, 397, 1490, 1640
Hpy8I	GTNNAC	5 cut(s)	125, 490, 1110, 1391, 1534
HpyAV	CCTTC	5 cut(s)	309, 403, 461, 1098, 1277
HpyCH4III	ACNGT	3 cut(s)	118, 494, 1487
HpyCH4IV	ACGT	2 cut(s)	777, 1393
HpyF10VI	GCNNNNNNNGC	4 cut(s)	185, 1180, 1189, 1262
HpyF3I	CTNAG	9 cut(s)	351, 360, 473, 537, 618, 723, 1170, 1194, 1665
HpySE526I	ACGT	2 cut(s)	777, 1393
Kzo9I	GATC	6 cut(s)	43, 356, 374, 600, 673, 1060
LmnI	GCTCC	5 cut(s)	335, 351, 833, 1262, 1616
Lsp1109I	GCAGC	1 cut(s)	1583
LweI	GCATC	3 cut(s)	333, 812, 1059
MaeI	CTAG	3 cut(s)	101, 303, 309
MaeII	ACGT	2 cut(s)	777, 1393
MaeIII	GTNAC	1 cut(s)	626
MalI	GATC	6 cut(s)	45, 358, 376, 602, 675, 1062
MboI	GATC	6 cut(s)	43, 356, 374, 600, 673, 1060
MboII	GAAGA	7 cut(s)	92, 166, 169, 200, 718, 923, 1628
MflI	RGATCY	3 cut(s)	356, 374, 673
MhlI	GDGCHC	4 cut(s)	75, 235, 340, 1267
MlsI	TGGCCA	1 cut(s)	688
MluNI	TGGCCA	1 cut(s)	688
MlyI	GAGTC	2 cut(s)	571, 739
Mox20I	TGGCCA	1 cut(s)	688
MscI	TGGCCA	1 cut(s)	688
MseI	TTAA	8 cut(s)	551, 639, 939, 962, 1071, 1211, 1524, 1676
MslI	CAYNNNNRTG	3 cut(s)	495, 688, 1584
Msp20I	TGGCCA	1 cut(s)	688
MspA1I	CMGCKG	1 cut(s)	1174
MspI	CCGG	2 cut(s)	378, 517
MspR9I	CCNGG	2 cut(s)	518, 1593
MvaI	CCWGG	1 cut(s)	1593
MwoI	GCNNNNNNNGC	4 cut(s)	185, 1180, 1189, 1262
NciI	CCSGG	1 cut(s)	518
NcoI	CCATGG	2 cut(s)	683, 689
NdeI	CATATG	1 cut(s)	605
NdeII	GATC	6 cut(s)	43, 356, 374, 600, 673, 1060
NlaIV	GGNNCC	4 cut(s)	376, 675, 829, 1264
NspI	RCATGY	4 cut(s)	165, 572, 1148, 1532
NspV	TTCGAA	1 cut(s)	1270
PaeI	GCATGC	1 cut(s)	572
PceI	AGGCCT	1 cut(s)	179
PciI	ACATGT	2 cut(s)	161, 1528
PfeI	GAWTC	5 cut(s)	172, 709, 839, 1412, 1602
PkrI	GCNGC	2 cut(s)	827, 1598
PleI	GAGTC	2 cut(s)	570, 739
PpsI	GAGTC	2 cut(s)	570, 739
PscI	ACATGT	2 cut(s)	161, 1528
PshBI	ATTAAT	1 cut(s)	1676
Psp124BI	GAGCTC	1 cut(s)	340
Psp6I	CCWGG	1 cut(s)	1591
PspGI	CCWGG	1 cut(s)	1591
PspN4I	GGNNCC	4 cut(s)	376, 675, 829, 1264
PspPI	GGNCC	1 cut(s)	847
PsrI	GAACNNNNNNTAC	2 cut(s)	1419, 1451
PstI	CTGCAG	1 cut(s)	1601
PstNI	CAGNNNCTG	2 cut(s)	864, 1556
PsuI	RGATCY	3 cut(s)	356, 374, 673
PvuII	CAGCTG	1 cut(s)	1174
RsaI	GTAC	3 cut(s)	313, 382, 580
RsaNI	GTAC	3 cut(s)	312, 381, 579
RseI	CAYNNNNRTG	3 cut(s)	495, 688, 1584
SacI	GAGCTC	1 cut(s)	340
SaqAI	TTAA	8 cut(s)	551, 639, 939, 962, 1071, 1211, 1524, 1676
SatI	GCNGC	2 cut(s)	826, 1597
Sau3AI	GATC	6 cut(s)	43, 356, 374, 600, 673, 1060
Sau96I	GGNCC	1 cut(s)	847
SchI	GAGTC	2 cut(s)	571, 739
ScrFI	CCNGG	2 cut(s)	518, 1593
SduI	GDGCHC	4 cut(s)	75, 235, 340, 1267
SfaNI	GCATC	3 cut(s)	333, 812, 1059
SfcI	CTRYAG	3 cut(s)	801, 1387, 1597
SfuI	TTCGAA	1 cut(s)	1270
SinI	GGWCC	1 cut(s)	847
SmiMI	CAYNNNNRTG	3 cut(s)	495, 688, 1584
SmlI	CTYRAG	2 cut(s)	234, 1205
SmoI	CTYRAG	2 cut(s)	234, 1205
SphI	GCATGC	1 cut(s)	572
SseBI	AGGCCT	1 cut(s)	179
SsiI	CCGC	4 cut(s)	825, 833, 1190, 1424
SspI	AATATT	1 cut(s)	1573
SspMI	CTAG	3 cut(s)	101, 303, 309
SstI	GAGCTC	1 cut(s)	340
StuI	AGGCCT	1 cut(s)	179
StyD4I	CCNGG	2 cut(s)	516, 1591
StyI	CCWWGG	4 cut(s)	683, 689, 843, 995
TaaI	ACNGT	3 cut(s)	118, 494, 1487
TaiI	ACGT	2 cut(s)	780, 1396
TaqI	TCGA	3 cut(s)	46, 465, 1270
TatI	WGTACW	1 cut(s)	311
TauI	GCSGC	1 cut(s)	828
TfiI	GAWTC	5 cut(s)	172, 709, 839, 1412, 1602
Tru1I	TTAA	8 cut(s)	551, 639, 939, 962, 1071, 1211, 1524, 1676
Tru9I	TTAA	8 cut(s)	551, 639, 939, 962, 1071, 1211, 1524, 1676
TscAI	CASTG	3 cut(s)	82, 996, 1557
TseI	GCWGC	1 cut(s)	1596
TspDTI	ATGAA	5 cut(s)	71, 185, 1091, 1307, 1602
TspRI	CASTG	3 cut(s)	82, 996, 1557
VpaK11BI	GGWCC	1 cut(s)	847
VspI	ATTAAT	1 cut(s)	1676
XapI	RAATTY	6 cut(s)	387, 527, 555, 882, 1073, 1118
XceI	RCATGY	4 cut(s)	165, 572, 1148, 1532
XmiI	GTMKAC	2 cut(s)	1109, 1390
XspI	CTAG	3 cut(s)	101, 303, 309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.