Rmu_sc0001637.1_g000009

Dipeptidyl peptidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001637.1
OG0004088
Physical Location & Seq
Forward (+)
39634 .. 41406
1773 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1293 bp
atgcaatcagctgatgagaacaataagaagaagaaattgaagttaagttgcgaaatgccggccacggacgctaatttttcacagaaactggatgactgtattgtgtttcctattgaggagattgtgcagcagcctctgcctggatgtgttgctcctgcatcgattagttttagcggtgatgatagcattgtgacgtatctgtttagtcctgatcagagtttgaataggaaggtgtttaaatttgacctcaagagttgtgtggaagagctgtgtttcagtcctccggatggggggcttgatgagagcaatatatcggcggaggagaagttgaggagggagaggttgagggagcgggggttgggagtgacaaggtatgagtgggtgaagacaagctcggttaagaaagcaatcatggtgccattgccagctgggatttatttccaggatctttcctgttcagaaccggagctcaagattccaagcacaccgtcttcaccaattattgatccccatctgtccccagatggtacaatgcttggttatgtaaaagacagcgagttgcatgttctaaatttgttgtacaatgaatcaaaacagcttacatctggtgcgagaggaggtgttttgactcatggccttgctgaatatatagcgcaggaagaaatggaccgcaagaatggatactggtggtctctagacagcaaattcattgcattcacagaagttgattcctctgagattcctctcttcagaatcatgcatcaaggtaaaagttctgttggtttggaagctcaagaagatcacccttatccctttgcgggagcttcaaatgtcaaagtttgcctcggagtagtttcctctgctggaggtcctgttacttggatggagcttctctgtgggggtacagatcaaccagacaatgaggaggaatatctggcaagagtaaattggatgcatggaaatgttctaatagctcaggttttgaacaggtcgcacagcagactaaagatccttaagtttgacattaaaaatgggaagagaaaggttctattggtagaagagcaacgcaaatggatcaacttacatgactgttttacgcctctagacaaaggactaaccaaattttctgggggatttatctgggcaagtgagaaatcaggattcaaacatctttacctgcatgatgccaatgggacatgcttaggtcctatcactgaaggagaatggatggtcgagcaaattgctggtgtaaatgaagctgctggtcttgtttatttcactggaactttatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
ko04974 map04974
Pfam Domains
Protein Families
DPPIV_N Peptidase_S9

Protein Analysis

430

Amino Acids

47.8

Weight (kDa)

5.35

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DPPIV_N PF00930 135 - 429 7.1e-69 Dipeptidyl peptidase IV (DPP IV) N-terminal region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1185
AccB1I GGYRCC 1 cut(s) 415
AccBSI CCGCTC 1 cut(s) 352
AccIII TCCGGA 1 cut(s) 283
AciI CCGC 5 cut(s) 174, 317, 352, 670, 818
AclWI GGATC 4 cut(s) 453, 500, 1003, 1082
AcoI YGGCCR 1 cut(s) 60
AcsI RAATTY 4 cut(s) 239, 571, 704, 1121
AcuI CTGAAG 2 cut(s) 733, 1236
AfaI GTAC 3 cut(s) 529, 581, 904
AfiI CCNNNNNNNGG 4 cut(s) 140, 287, 290, 818
AflII CTTAAG 1 cut(s) 1013
AgsI TTSAA 5 cut(s) 40, 223, 828, 985, 1165
AjnI CCWGG 2 cut(s) 139, 441
Alw21I GWGCWC 1 cut(s) 471
Alw26I GTCTC 1 cut(s) 696
AlwI GGATC 4 cut(s) 453, 500, 1003, 1082
AlwNI CAGNNNCTG 2 cut(s) 88, 136
Aor13HI TCCGGA 1 cut(s) 283
AoxI GGCC 2 cut(s) 60, 634
ApeKI GCWGC 3 cut(s) 127, 130, 1259
ApoI RAATTY 4 cut(s) 239, 571, 704, 1121
AspLEI GCGC 1 cut(s) 655
AspS9I GGNCC 3 cut(s) 667, 869, 1205
AsuHPI GGTGA 4 cut(s) 188, 394, 486, 794
AvaII GGWCC 3 cut(s) 667, 869, 1205
BanI GGYRCC 1 cut(s) 415
BanII GRGCYC 1 cut(s) 471
BbsI GAAGAC 2 cut(s) 392, 483
Bbv12I GWGCWC 1 cut(s) 471
BbvI GCAGC 3 cut(s) 139, 142, 1246
BccI CCATC 5 cut(s) 281, 518, 519, 877, 1222
BcgI CGANNNNNNTGC 2 cut(s) 1223, 1257
BciT130I CCWGG 2 cut(s) 141, 443
BciVI GTATCC 1 cut(s) 674
BclI TGATCA 1 cut(s) 211
BcoDI GTCTC 1 cut(s) 696
BfaI CTAG 2 cut(s) 695, 1103
BfrI CTTAAG 1 cut(s) 1013
BfuAI ACCTGC 1 cut(s) 1185
BfuI GTATCC 1 cut(s) 674
BisI GCNGC 3 cut(s) 128, 131, 1260
BlsI GCNGC 3 cut(s) 129, 132, 1261
Bme1390I CCNGG 2 cut(s) 141, 443
Bme18I GGWCC 3 cut(s) 667, 869, 1205
BmgT120I GGNCC 3 cut(s) 667, 869, 1205
BmiI GGNNCC 1 cut(s) 417
BmrFI CCNGG 2 cut(s) 141, 443
BmsI GCATC 4 cut(s) 167, 769, 942, 1174
BpiI GAAGAC 2 cut(s) 392, 483
BpmI CTGGAG 1 cut(s) 885
Bpu10I CCTNAGC 2 cut(s) 975, 1201
BpuEI CTTGAG 3 cut(s) 233, 455, 777
Bsa29I ATCGAT 1 cut(s) 161
BsaBI GATNNNNATC 1 cut(s) 510
BsaI GGTCTC 1 cut(s) 696
BsaJI CCNNGG 2 cut(s) 63, 844
BsaWI WCCGGW 2 cut(s) 283, 463
BsaXI ACNNNNNCTCC 6 cut(s) 311, 341, 341, 371, 858, 888
Bsc4I CCNNNNNNNGG 4 cut(s) 140, 287, 290, 818
Bse118I RCCGGY 1 cut(s) 58
Bse1I ACTGG 3 cut(s) 93, 689, 1285
Bse3DI GCAATG 2 cut(s) 419, 708
Bse8I GATNNNNATC 1 cut(s) 510
BseAI TCCGGA 1 cut(s) 283
BseBI CCWGG 2 cut(s) 141, 443
BseCI ATCGAT 1 cut(s) 161
BseDI CCNNGG 2 cut(s) 63, 844
BseGI GGATG 6 cut(s) 97, 149, 292, 888, 957, 1233
BseJI GATNNNNATC 1 cut(s) 510
BseLI CCNNNNNNNGG 4 cut(s) 140, 287, 290, 818
BseMI GCAATG 2 cut(s) 419, 708
BseMII CTCAG 2 cut(s) 726, 989
BseNI ACTGG 3 cut(s) 93, 689, 1285
BseRI GAGGAG 5 cut(s) 131, 335, 346, 630, 938
BseXI GCAGC 3 cut(s) 139, 142, 1246
BseYI CCCAGC 1 cut(s) 428
BsgI GTGCAG 1 cut(s) 146
BshFI GGCC 2 cut(s) 62, 636
BshNI GGYRCC 1 cut(s) 415
BshVI ATCGAT 1 cut(s) 161
BsiHKAI GWGCWC 1 cut(s) 471
BsiSI CCGG 3 cut(s) 59, 284, 464
BslFI GGGAC 2 cut(s) 502, 1207
BslI CCNNNNNNNGG 4 cut(s) 140, 287, 290, 818
BsmAI GTCTC 1 cut(s) 696
BsmFI GGGAC 2 cut(s) 502, 1207
BsmI GAATGC 1 cut(s) 713
BsnI GGCC 2 cut(s) 62, 636
Bso31I GGTCTC 1 cut(s) 696
Bsp1286I GDGCHC 1 cut(s) 471
Bsp13I TCCGGA 1 cut(s) 283
Bsp1407I TGTACA 1 cut(s) 579
Bsp143I GATC 7 cut(s) 211, 445, 505, 799, 907, 1008, 1074
BspACI CCGC 5 cut(s) 174, 317, 352, 670, 818
BspANI GGCC 2 cut(s) 62, 636
BspCNI CTCAG 2 cut(s) 727, 988
BspDI ATCGAT 1 cut(s) 161
BspEI TCCGGA 1 cut(s) 283
BspLI GGNNCC 1 cut(s) 417
BspMI ACCTGC 1 cut(s) 1185
BspPI GGATC 4 cut(s) 453, 500, 1003, 1082
BspQI GCTCTTC 2 cut(s) 258, 1053
BspT107I GGYRCC 1 cut(s) 415
BspTI CTTAAG 1 cut(s) 1013
BspTNI GGTCTC 1 cut(s) 696
BsrBI CCGCTC 1 cut(s) 352
BsrDI GCAATG 2 cut(s) 419, 708
BsrFI RCCGGY 1 cut(s) 58
BsrGI TGTACA 1 cut(s) 579
BsrI ACTGG 3 cut(s) 93, 689, 1285
BssAI RCCGGY 1 cut(s) 58
BssECI CCNNGG 2 cut(s) 63, 844
BssMI GATC 7 cut(s) 211, 445, 505, 799, 907, 1008, 1074
Bst2UI CCWGG 2 cut(s) 141, 443
Bst4CI ACNGT 3 cut(s) 98, 489, 1091
Bst6I CTCTTC 4 cut(s) 258, 752, 1031, 1053
BstAFI CTTAAG 1 cut(s) 1013
BstAPI GCANNNNNTGC 1 cut(s) 136
BstAUI TGTACA 1 cut(s) 579
BstC8I GCNNGC 2 cut(s) 60, 426
BstDEI CTNAG 3 cut(s) 735, 975, 1201
BstDSI CCRYGG 1 cut(s) 63
BstF5I GGATG 6 cut(s) 97, 149, 292, 888, 957, 1233
BstHHI GCGC 1 cut(s) 655
BstKTI GATC 7 cut(s) 214, 448, 508, 802, 910, 1011, 1077
BstMAI GTCTC 1 cut(s) 696
BstMBI GATC 7 cut(s) 211, 445, 505, 799, 907, 1008, 1074
BstMWI GCNNNNNNNGC 2 cut(s) 68, 136
BstNI CCWGG 2 cut(s) 141, 443
BstNSI RCATGY 2 cut(s) 566, 1200
BstSCI CCNGG 2 cut(s) 139, 441
BstV1I GCAGC 3 cut(s) 139, 142, 1246
BstV2I GAAGAC 2 cut(s) 392, 483
BstX2I RGATCY 2 cut(s) 445, 1008
BstYI RGATCY 2 cut(s) 445, 1008
Bsu15I ATCGAT 1 cut(s) 161
BsuI GTATCC 1 cut(s) 674
BsuRI GGCC 2 cut(s) 62, 636
BsuTUI ATCGAT 1 cut(s) 161
BtgI CCRYGG 1 cut(s) 63
BtsCI GGATG 6 cut(s) 97, 149, 292, 888, 957, 1233
BtsIMutI CAGTG 2 cut(s) 1212, 1278
BveI ACCTGC 1 cut(s) 1185
Cac8I GCNNGC 2 cut(s) 60, 426
CaiI CAGNNNCTG 2 cut(s) 88, 136
CfoI GCGC 1 cut(s) 655
Cfr10I RCCGGY 1 cut(s) 58
Cfr13I GGNCC 3 cut(s) 667, 869, 1205
ClaI ATCGAT 1 cut(s) 161
CseI GACGC 1 cut(s) 77
Csp6I GTAC 3 cut(s) 528, 580, 903
CviAII CATG 8 cut(s) 412, 563, 632, 757, 956, 1085, 1181, 1197
CviQI GTAC 3 cut(s) 528, 580, 903
DdeI CTNAG 3 cut(s) 735, 975, 1201
DpnI GATC 7 cut(s) 213, 447, 507, 801, 909, 1010, 1076
DpnII GATC 7 cut(s) 211, 445, 505, 799, 907, 1008, 1074
DraI TTTAAA 1 cut(s) 238
EaeI YGGCCR 1 cut(s) 60
Eam1104I CTCTTC 4 cut(s) 258, 752, 1031, 1053
EarI CTCTTC 4 cut(s) 258, 752, 1031, 1053
EciI GGCGGA 1 cut(s) 332
Ecl136II GAGCTC 1 cut(s) 469
Eco24I GRGCYC 1 cut(s) 471
Eco31I GGTCTC 1 cut(s) 696
Eco47I GGWCC 3 cut(s) 667, 869, 1205
Eco53kI GAGCTC 1 cut(s) 469
Eco57I CTGAAG 2 cut(s) 733, 1236
EcoICRI GAGCTC 1 cut(s) 469
EcoO109I RGGNCCY 2 cut(s) 869, 1205
EcoRII CCWGG 2 cut(s) 139, 441
EcoT22I ATGCAT 2 cut(s) 762, 957
EcoT38I GRGCYC 1 cut(s) 471
FaeI CATG 8 cut(s) 415, 566, 635, 760, 959, 1088, 1184, 1200
FaqI GGGAC 2 cut(s) 502, 1207
FatI CATG 8 cut(s) 411, 562, 631, 756, 955, 1084, 1180, 1196
FauI CCCGC 2 cut(s) 345, 811
FbaI TGATCA 1 cut(s) 211
Fnu4HI GCNGC 3 cut(s) 128, 131, 1260
FokI GGATG 6 cut(s) 104, 156, 299, 895, 964, 1240
FriOI GRGCYC 1 cut(s) 471
Fsp4HI GCNGC 3 cut(s) 128, 131, 1260
FspBI CTAG 2 cut(s) 695, 1103
GlaI GCGC 1 cut(s) 654
GluI GCNGC 3 cut(s) 128, 131, 1260
GsaI CCCAGC 1 cut(s) 432
GsuI CTGGAG 1 cut(s) 885
HaeIII GGCC 2 cut(s) 62, 636
HapII CCGG 3 cut(s) 59, 284, 464
HgaI GACGC 1 cut(s) 77
HhaI GCGC 1 cut(s) 655
Hin1II CATG 8 cut(s) 415, 566, 635, 760, 959, 1088, 1184, 1200
Hin6I GCGC 1 cut(s) 653
HinP1I GCGC 1 cut(s) 653
HinfI GANTC 7 cut(s) 475, 587, 628, 728, 739, 753, 1161
HpaII CCGG 3 cut(s) 59, 284, 464
HphI GGTGA 4 cut(s) 188, 394, 486, 794
Hpy188I TCNGA 5 cut(s) 216, 460, 736, 752, 848
Hpy188III TCNNGA 8 cut(s) 209, 250, 284, 472, 695, 794, 1103, 1158
HpyAV CCTTC 2 cut(s) 223, 1211
HpyCH4III ACNGT 3 cut(s) 98, 489, 1091
HpyCH4IV ACGT 1 cut(s) 194
HpyCH4V TGCA 8 cut(s) 4, 127, 158, 562, 713, 760, 955, 1180
HpyF10VI GCNNNNNNNGC 2 cut(s) 68, 136
HpyF3I CTNAG 3 cut(s) 735, 975, 1201
HpySE526I ACGT 1 cut(s) 194
Hsp92II CATG 8 cut(s) 415, 566, 635, 760, 959, 1088, 1184, 1200
HspAI GCGC 1 cut(s) 653
Kpn2I TCCGGA 1 cut(s) 283
KroI GCCGGC 1 cut(s) 58
KroNI GCCGGC 1 cut(s) 60
Ksp22I TGATCA 1 cut(s) 211
Kzo9I GATC 7 cut(s) 211, 445, 505, 799, 907, 1008, 1074
LguI GCTCTTC 2 cut(s) 258, 1053
LmnI GCTCC 5 cut(s) 157, 349, 466, 821, 886
Lsp1109I GCAGC 3 cut(s) 139, 142, 1246
LweI GCATC 4 cut(s) 167, 769, 942, 1174
MaeI CTAG 2 cut(s) 695, 1103
MaeII ACGT 1 cut(s) 194
MaeIII GTNAC 3 cut(s) 190, 364, 874
MalI GATC 7 cut(s) 213, 447, 507, 801, 909, 1010, 1076
MbiI CCGCTC 1 cut(s) 352
MboI GATC 7 cut(s) 211, 445, 505, 799, 907, 1008, 1074
MflI RGATCY 2 cut(s) 445, 1008
MhlI GDGCHC 1 cut(s) 471
MluCI AATT 9 cut(s) 35, 73, 239, 498, 571, 704, 946, 1121, 1239
MlyI GAGTC 1 cut(s) 622
Mph1103I ATGCAT 2 cut(s) 762, 957
MroI TCCGGA 1 cut(s) 283
MroNI GCCGGC 1 cut(s) 58
MseI TTAA 5 cut(s) 44, 237, 399, 1014, 1026
MslI CAYNNNNRTG 1 cut(s) 960
MspA1I CMGCKG 2 cut(s) 11, 428
MspCI CTTAAG 1 cut(s) 1013
MspI CCGG 3 cut(s) 59, 284, 464
MspR9I CCNGG 2 cut(s) 141, 443
Mva1269I GAATGC 1 cut(s) 713
MvaI CCWGG 2 cut(s) 141, 443
MwoI GCNNNNNNNGC 2 cut(s) 68, 136
NaeI GCCGGC 1 cut(s) 60
NdeII GATC 7 cut(s) 211, 445, 505, 799, 907, 1008, 1074
NgoMIV GCCGGC 1 cut(s) 58
NlaIII CATG 8 cut(s) 415, 566, 635, 760, 959, 1088, 1184, 1200
NlaIV GGNNCC 1 cut(s) 417
NmuCI GTSAC 2 cut(s) 190, 364
NsiI ATGCAT 2 cut(s) 762, 957
NspI RCATGY 2 cut(s) 566, 1200
PciSI GCTCTTC 2 cut(s) 258, 1053
PctI GAATGC 1 cut(s) 713
PdiI GCCGGC 1 cut(s) 60
PfeI GAWTC 6 cut(s) 475, 587, 728, 739, 753, 1161
PfoI TCCNGGA 1 cut(s) 441
PkrI GCNGC 3 cut(s) 129, 132, 1261
PleI GAGTC 1 cut(s) 622
PpsI GAGTC 1 cut(s) 622
PpuMI RGGWCCY 2 cut(s) 869, 1205
Psp124BI GAGCTC 1 cut(s) 471
Psp5II RGGWCCY 2 cut(s) 869, 1205
Psp6I CCWGG 2 cut(s) 139, 441
PspFI CCCAGC 1 cut(s) 428
PspGI CCWGG 2 cut(s) 139, 441
PspN4I GGNNCC 1 cut(s) 417
PspPI GGNCC 3 cut(s) 667, 869, 1205
PspPPI RGGWCCY 2 cut(s) 869, 1205
PstNI CAGNNNCTG 2 cut(s) 88, 136
PsuI RGATCY 2 cut(s) 445, 1008
PvuII CAGCTG 2 cut(s) 11, 428
RsaI GTAC 3 cut(s) 529, 581, 904
RsaNI GTAC 3 cut(s) 528, 580, 903
RseI CAYNNNNRTG 1 cut(s) 960
SacI GAGCTC 1 cut(s) 471
SapI GCTCTTC 2 cut(s) 258, 1053
SaqAI TTAA 5 cut(s) 44, 237, 399, 1014, 1026
SatI GCNGC 3 cut(s) 128, 131, 1260
Sau3AI GATC 7 cut(s) 211, 445, 505, 799, 907, 1008, 1074
Sau96I GGNCC 3 cut(s) 667, 869, 1205
SchI GAGTC 1 cut(s) 622
ScrFI CCNGG 2 cut(s) 141, 443
SduI GDGCHC 1 cut(s) 471
SfaNI GCATC 4 cut(s) 167, 769, 942, 1174
SinI GGWCC 3 cut(s) 667, 869, 1205
SmiMI CAYNNNNRTG 1 cut(s) 960
SmlI CTYRAG 4 cut(s) 248, 470, 792, 1013
SmoI CTYRAG 4 cut(s) 248, 470, 792, 1013
Sse9I AATT 9 cut(s) 35, 73, 239, 498, 571, 704, 946, 1121, 1239
SsiI CCGC 5 cut(s) 174, 317, 352, 670, 818
SspMI CTAG 2 cut(s) 695, 1103
SstI GAGCTC 1 cut(s) 471
StyD4I CCNGG 2 cut(s) 139, 441
TaaI ACNGT 3 cut(s) 98, 489, 1091
TaiI ACGT 1 cut(s) 197
TaqI TCGA 2 cut(s) 161, 1233
TasI AATT 9 cut(s) 35, 73, 239, 498, 571, 704, 946, 1121, 1239
TatI WGTACW 1 cut(s) 579
TfiI GAWTC 6 cut(s) 475, 587, 728, 739, 753, 1161
Tru1I TTAA 5 cut(s) 44, 237, 399, 1014, 1026
Tru9I TTAA 5 cut(s) 44, 237, 399, 1014, 1026
TscAI CASTG 2 cut(s) 1219, 1285
TseFI GTSAC 2 cut(s) 190, 364
TseI GCWGC 3 cut(s) 127, 130, 1259
Tsp45I GTSAC 2 cut(s) 190, 364
TspDTI ATGAA 3 cut(s) 600, 697, 1269
TspGWI ACGGA 1 cut(s) 80
TspRI CASTG 2 cut(s) 1219, 1285
Vha464I CTTAAG 1 cut(s) 1013
VpaK11BI GGWCC 3 cut(s) 667, 869, 1205
XapI RAATTY 4 cut(s) 239, 571, 704, 1121
XbaI TCTAGA 2 cut(s) 694, 1102
XceI RCATGY 2 cut(s) 566, 1200
XspI CTAG 2 cut(s) 695, 1103
Zsp2I ATGCAT 2 cut(s) 762, 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.