Rmu_sc0001879.1_g000038

Serine incorporator

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001879.1
Physical Location & Seq
Reverse (-)
122482 .. 128173
5692 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001879.1_g000038.1.cds

Sequence Viewer

Length: 1392 bp
atggtggtgatggcggatctggtttgctatgggtcagatccgattgtgggtcttttggtttggtttattgccctcagtggtaatggtggtgtcagtggcgatgcacatgatcgatgctcctggtgtgtggggttgcaggattttgcttctagtcccaacgaaatgtgcggtggcggctttgactatagcgcttccacttgcggcctctgctcctccgtggcctccgggatttccagcaaatccgcgagactcgggtactgcggcctcttcgggctttccttggtcgtcacttggattcttagagaagttggagctcctctcttggagaaaatcccatggataagctcttccgagactcacaccaaggcatggtatcaaatacaagcggttcttcgggtgagcatggggaatttcttgttttttgcgatacttgcgcttataatgattggtgtgaaggatcgaaatgaccgacgagatggctggcaccatggtggatggattgccaagatggtcatctggcttttgcttgtcattctcatgttttttcttccagacattgtcatcacaatctacggagatatatcaaaatttggggcaggcctgtttttactggttcaagtgattatcttactagactttactcactcctggaatgatgcatgggtggagaaagatgaacaaaaatggtatatcgctttgcttgctatatcaattgggtgctatattgcagcatttgtgttcttaggcattctgttcatttggttcaatccctctggcaatgactgtggccttaatgtcttcttcattgtcatgaccatgattctggcatttgcatttgcagtgattgcattacacccaacggtgaatggcagcctccttcctgcttctgttatatcagtatattgtgcttatgtgtgctacacggctctttcctgtgagcctgttggctatgcttgcaatggtcttcaccactccagcgcggtctcttttagtactactcttcttgggatggtgacgaccattctttcagttctgtactctgcattacgtgctggatcttcaacaacttttctgtcaccaccgtcttcacccagggcagctgaaaagaaacctcttcttgaggggaaagagttggaagaagggaaagaaaagaatgaaaaagaagcacaacctgtcagctattcctatacatttttccacctgatatttgccttggctagcatgtattcagccatgcttctttcgggttggaccaacacatcagagagctcagaccttatagacgttggctggacatcagtttgggtgcgaatctgcacagaatgggttactgctggactatatgtttggtcccttgtagctcctttacttttcccagaccgggagttctag

Protein Analysis

463

Amino Acids

50.73

Weight (kDa)

5.26

Isoelectric Point (pI)

28.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 440
AccB1I GGYRCC 1 cut(s) 483
AccB7I CCANNNNNTGG 1 cut(s) 369
AccII CGCG 2 cut(s) 245, 980
AciI CCGC 8 cut(s) 14, 168, 174, 201, 243, 261, 386, 980
AclWI GGATC 4 cut(s) 24, 32, 465, 1063
AcsI RAATTY 2 cut(s) 409, 587
AfaI GTAC 3 cut(s) 257, 994, 1037
AfeI AGCGCT 1 cut(s) 190
AfiI CCNNNNNNNGG 3 cut(s) 47, 369, 1381
AgsI TTSAA 3 cut(s) 617, 766, 1062
AjnI CCWGG 3 cut(s) 119, 647, 1091
AleI CACNNNNGTG 1 cut(s) 489
AluBI AGCT 6 cut(s) 314, 345, 1100, 1179, 1269, 1361
AluI AGCT 6 cut(s) 314, 345, 1100, 1179, 1269, 1361
Alw21I GWGCWC 2 cut(s) 316, 1271
Alw26I GTCTC 3 cut(s) 241, 347, 988
AlwI GGATC 4 cut(s) 24, 32, 465, 1063
Ama87I CYCGRG 1 cut(s) 251
Aor51HI AGCGCT 1 cut(s) 190
AoxI GGCC 5 cut(s) 202, 219, 262, 598, 787
ApeKI GCWGC 3 cut(s) 728, 870, 1097
ApoI RAATTY 2 cut(s) 409, 587
ArsI GACNNNNNNTTYG 2 cut(s) 1329, 1361
AspLEI GCGC 3 cut(s) 191, 436, 980
AspS9I GGNCC 2 cut(s) 1251, 1350
AsuC2I CCSGG 2 cut(s) 226, 1382
AsuHPI GGTGA 7 cut(s) 19, 409, 874, 959, 1024, 1068, 1080
AsuNHI GCTAGC 1 cut(s) 1217
AvaI CYCGRG 1 cut(s) 251
AvaII GGWCC 2 cut(s) 1251, 1350
BanI GGYRCC 1 cut(s) 483
BanII GRGCYC 2 cut(s) 316, 1271
BbsI GAAGAC 3 cut(s) 790, 956, 1077
Bbv12I GWGCWC 2 cut(s) 316, 1271
BbvI GCAGC 3 cut(s) 740, 882, 1109
BccI CCATC 5 cut(s) 4, 470, 489, 502, 1003
BceAI ACGGC 1 cut(s) 939
BciT130I CCWGG 3 cut(s) 121, 649, 1093
BcnI CCSGG 2 cut(s) 226, 1382
BcoDI GTCTC 3 cut(s) 241, 347, 988
BfaI CTAG 4 cut(s) 150, 632, 1218, 1390
BfmI CTRYAG 1 cut(s) 184
BfoI RGCGCY 1 cut(s) 192
BisI GCNGC 6 cut(s) 175, 202, 262, 729, 871, 1098
BlsI GCNGC 6 cut(s) 176, 203, 263, 730, 872, 1099
BmcAI AGTACT 1 cut(s) 994
Bme1390I CCNGG 5 cut(s) 121, 226, 649, 1093, 1382
Bme18I GGWCC 2 cut(s) 1251, 1350
BmeT110I CYCGRG 1 cut(s) 251
BmgT120I GGNCC 2 cut(s) 1251, 1350
BmiI GGNNCC 2 cut(s) 485, 1352
BmrFI CCNGG 5 cut(s) 121, 226, 649, 1093, 1382
BmsI GCATC 3 cut(s) 91, 104, 646
BmtI GCTAGC 1 cut(s) 1221
BpiI GAAGAC 3 cut(s) 790, 956, 1077
BplI GAGNNNNNCTC 2 cut(s) 303, 335
BpmI CTGGAG 1 cut(s) 958
BpuEI CTTGAG 1 cut(s) 1139
BpuMI CCSGG 2 cut(s) 226, 1382
Bsa29I ATCGAT 1 cut(s) 112
BsaAI YACGTR 1 cut(s) 1049
BsaBI GATNNNNATC 1 cut(s) 512
BsaI GGTCTC 1 cut(s) 988
BsaJI CCNNGG 8 cut(s) 216, 279, 335, 363, 487, 1091, 1092, 1212
Bsc4I CCNNNNNNNGG 3 cut(s) 47, 369, 1381
Bse1I ACTGG 1 cut(s) 615
Bse3DI GCAATG 2 cut(s) 784, 964
Bse8I GATNNNNATC 1 cut(s) 512
BseBI CCWGG 3 cut(s) 121, 649, 1093
BseCI ATCGAT 1 cut(s) 112
BseDI CCNNGG 8 cut(s) 216, 279, 335, 363, 487, 1091, 1092, 1212
BseGI GGATG 2 cut(s) 500, 1014
BseJI GATNNNNATC 1 cut(s) 512
BseLI CCNNNNNNNGG 3 cut(s) 47, 369, 1381
BseMI GCAATG 2 cut(s) 784, 964
BseMII CTCAG 2 cut(s) 88, 1284
BseNI ACTGG 1 cut(s) 615
BseRI GAGGAG 2 cut(s) 202, 306
BseXI GCAGC 3 cut(s) 740, 882, 1109
BsgI GTGCAG 1 cut(s) 1300
Bsh1236I CGCG 2 cut(s) 245, 980
BshFI GGCC 5 cut(s) 204, 221, 264, 600, 789
BshNI GGYRCC 1 cut(s) 483
BshVI ATCGAT 1 cut(s) 112
BsiHKAI GWGCWC 2 cut(s) 316, 1271
BsiHKCI CYCGRG 1 cut(s) 251
BsiSI CCGG 2 cut(s) 225, 1381
BslFI GGGAC 2 cut(s) 138, 1336
BslI CCNNNNNNNGG 3 cut(s) 47, 369, 1381
BsmAI GTCTC 3 cut(s) 241, 347, 988
BsmFI GGGAC 2 cut(s) 138, 1336
BsmI GAATGC 1 cut(s) 747
BsnI GGCC 5 cut(s) 204, 221, 264, 600, 789
Bso31I GGTCTC 1 cut(s) 988
BsoBI CYCGRG 1 cut(s) 251
Bsp1286I GDGCHC 2 cut(s) 316, 1271
Bsp143I GATC 5 cut(s) 16, 37, 109, 457, 1055
Bsp19I CCATGG 2 cut(s) 335, 487
BspACI CCGC 8 cut(s) 14, 168, 174, 201, 243, 261, 386, 980
BspANI GGCC 5 cut(s) 204, 221, 264, 600, 789
BspCNI CTCAG 2 cut(s) 87, 1283
BspDI ATCGAT 1 cut(s) 112
BspFNI CGCG 2 cut(s) 245, 980
BspHI TCATGA 1 cut(s) 810
BspLI GGNNCC 2 cut(s) 485, 1352
BspOI GCTAGC 1 cut(s) 1221
BspPI GGATC 4 cut(s) 24, 32, 465, 1063
BspQI GCTCTTC 1 cut(s) 352
BspT107I GGYRCC 1 cut(s) 483
BspTNI GGTCTC 1 cut(s) 988
BsrDI GCAATG 2 cut(s) 784, 964
BsrI ACTGG 1 cut(s) 615
BssECI CCNNGG 8 cut(s) 216, 279, 335, 363, 487, 1091, 1092, 1212
BssMI GATC 5 cut(s) 16, 37, 109, 457, 1055
BssT1I CCWWGG 5 cut(s) 279, 335, 363, 487, 1212
Bst2UI CCWGG 3 cut(s) 121, 649, 1093
Bst4CI ACNGT 3 cut(s) 785, 862, 1083
Bst6I CTCTTC 4 cut(s) 272, 352, 1005, 1119
BstAPI GCANNNNNTGC 2 cut(s) 845, 1049
BstBAI YACGTR 1 cut(s) 1049
BstC8I GCNNGC 5 cut(s) 482, 598, 702, 955, 1219
BstDEI CTNAG 4 cut(s) 74, 299, 742, 1270
BstDSI CCRYGG 3 cut(s) 216, 335, 487
BstF5I GGATG 2 cut(s) 500, 1014
BstFNI CGCG 2 cut(s) 245, 980
BstH2I RGCGCY 1 cut(s) 192
BstHHI GCGC 3 cut(s) 191, 436, 980
BstKTI GATC 5 cut(s) 19, 40, 112, 460, 1058
BstMAI GTCTC 3 cut(s) 241, 347, 988
BstMBI GATC 5 cut(s) 16, 37, 109, 457, 1055
BstMWI GCNNNNNNNGC 7 cut(s) 174, 207, 431, 701, 845, 954, 1049
BstNI CCWGG 3 cut(s) 121, 649, 1093
BstNSI RCATGY 1 cut(s) 1225
BstSCI CCNGG 5 cut(s) 119, 224, 647, 1091, 1380
BstSFI CTRYAG 1 cut(s) 184
BstUI CGCG 2 cut(s) 245, 980
BstV1I GCAGC 3 cut(s) 740, 882, 1109
BstV2I GAAGAC 3 cut(s) 790, 956, 1077
BstX2I RGATCY 3 cut(s) 16, 37, 1055
BstXI CCANNNNNNTGG 1 cut(s) 823
BstYI RGATCY 3 cut(s) 16, 37, 1055
Bsu15I ATCGAT 1 cut(s) 112
BsuRI GGCC 5 cut(s) 204, 221, 264, 600, 789
BsuTUI ATCGAT 1 cut(s) 112
BtgI CCRYGG 3 cut(s) 216, 335, 487
BtgZI GCGATG 1 cut(s) 114
BtsCI GGATG 2 cut(s) 500, 1014
BtsI GCAGTG 1 cut(s) 846
BtsIMutI CAGTG 3 cut(s) 82, 100, 846
Cac8I GCNNGC 5 cut(s) 482, 598, 702, 955, 1219
CciI TCATGA 1 cut(s) 810
CfoI GCGC 3 cut(s) 191, 436, 980
Cfr13I GGNCC 2 cut(s) 1251, 1350
ClaI ATCGAT 1 cut(s) 112
Csp6I GTAC 3 cut(s) 256, 993, 1036
CspCI CAANNNNNGTGG 2 cut(s) 766, 801
CviQI GTAC 3 cut(s) 256, 993, 1036
DdeI CTNAG 4 cut(s) 74, 299, 742, 1270
DpnI GATC 5 cut(s) 18, 39, 111, 459, 1057
DpnII GATC 5 cut(s) 16, 37, 109, 457, 1055
Eam1104I CTCTTC 4 cut(s) 272, 352, 1005, 1119
EarI CTCTTC 4 cut(s) 272, 352, 1005, 1119
EciI GGCGGA 1 cut(s) 29
Ecl136II GAGCTC 2 cut(s) 314, 1269
Eco130I CCWWGG 5 cut(s) 279, 335, 363, 487, 1212
Eco147I AGGCCT 1 cut(s) 600
Eco24I GRGCYC 2 cut(s) 316, 1271
Eco31I GGTCTC 1 cut(s) 988
Eco47I GGWCC 2 cut(s) 1251, 1350
Eco47III AGCGCT 1 cut(s) 190
Eco53kI GAGCTC 2 cut(s) 314, 1269
Eco88I CYCGRG 1 cut(s) 251
EcoICRI GAGCTC 2 cut(s) 314, 1269
EcoRII CCWGG 3 cut(s) 119, 647, 1091
EcoT14I CCWWGG 5 cut(s) 279, 335, 363, 487, 1212
EcoT22I ATGCAT 1 cut(s) 661
EcoT38I GRGCYC 2 cut(s) 316, 1271
ErhI CCWWGG 5 cut(s) 279, 335, 363, 487, 1212
FalI AAGNNNNNCTT 2 cut(s) 375, 407
FaqI GGGAC 2 cut(s) 138, 1336
Fnu4HI GCNGC 6 cut(s) 175, 202, 262, 729, 871, 1098
FokI GGATG 2 cut(s) 507, 1021
FriOI GRGCYC 2 cut(s) 316, 1271
Fsp4HI GCNGC 6 cut(s) 175, 202, 262, 729, 871, 1098
FspBI CTAG 4 cut(s) 150, 632, 1218, 1390
GlaI GCGC 3 cut(s) 190, 435, 979
GluI GCNGC 6 cut(s) 175, 202, 262, 729, 871, 1098
GsuI CTGGAG 1 cut(s) 958
HaeII RGCGCY 1 cut(s) 192
HaeIII GGCC 5 cut(s) 204, 221, 264, 600, 789
HapII CCGG 2 cut(s) 225, 1381
HhaI GCGC 3 cut(s) 191, 436, 980
Hin6I GCGC 3 cut(s) 189, 434, 978
HinP1I GCGC 3 cut(s) 189, 434, 978
HinfI GANTC 5 cut(s) 249, 295, 355, 820, 1311
HpaII CCGG 2 cut(s) 225, 1381
HphI GGTGA 7 cut(s) 19, 409, 874, 959, 1024, 1068, 1080
Hpy188I TCNGA 5 cut(s) 37, 42, 352, 1264, 1273
Hpy188III TCNNGA 3 cut(s) 551, 811, 1118
Hpy99I CGWCG 1 cut(s) 474
HpyAV CCTTC 3 cut(s) 448, 887, 1133
HpyCH4III ACNGT 3 cut(s) 785, 862, 1083
HpyCH4IV ACGT 2 cut(s) 1048, 1284
HpyF10VI GCNNNNNNNGC 7 cut(s) 174, 207, 431, 701, 845, 954, 1049
HpyF3I CTNAG 4 cut(s) 74, 299, 742, 1270
HpySE526I ACGT 2 cut(s) 1048, 1284
HspAI GCGC 3 cut(s) 189, 434, 978
Kzo9I GATC 5 cut(s) 16, 37, 109, 457, 1055
LguI GCTCTTC 1 cut(s) 352
LmnI GCTCC 5 cut(s) 122, 215, 311, 319, 1366
Lsp1109I GCAGC 3 cut(s) 740, 882, 1109
LweI GCATC 3 cut(s) 91, 104, 646
MaeI CTAG 4 cut(s) 150, 632, 1218, 1390
MaeII ACGT 2 cut(s) 1048, 1284
MaeIII GTNAC 4 cut(s) 286, 1012, 1074, 1327
MalI GATC 5 cut(s) 18, 39, 111, 459, 1057
MboI GATC 5 cut(s) 16, 37, 109, 457, 1055
MfeI CAATTG 1 cut(s) 711
MflI RGATCY 3 cut(s) 16, 37, 1055
MhlI GDGCHC 2 cut(s) 316, 1271
MluCI AATT 3 cut(s) 409, 587, 711
MlyI GAGTC 2 cut(s) 243, 349
MmeI TCCRAC 3 cut(s) 289, 1113, 1229
Mph1103I ATGCAT 1 cut(s) 661
MseI TTAA 1 cut(s) 792
MslI CAYNNNNRTG 4 cut(s) 489, 536, 809, 815
MspA1I CMGCKG 1 cut(s) 1100
MspI CCGG 2 cut(s) 225, 1381
MspR9I CCNGG 5 cut(s) 121, 226, 649, 1093, 1382
MunI CAATTG 1 cut(s) 711
Mva1269I GAATGC 1 cut(s) 747
MvaI CCWGG 3 cut(s) 121, 649, 1093
MvnI CGCG 2 cut(s) 245, 980
MwoI GCNNNNNNNGC 7 cut(s) 174, 207, 431, 701, 845, 954, 1049
NciI CCSGG 2 cut(s) 226, 1382
NcoI CCATGG 2 cut(s) 335, 487
NdeII GATC 5 cut(s) 16, 37, 109, 457, 1055
NheI GCTAGC 1 cut(s) 1217
NlaIV GGNNCC 2 cut(s) 485, 1352
NmuCI GTSAC 3 cut(s) 286, 1012, 1074
NsiI ATGCAT 1 cut(s) 661
NspI RCATGY 1 cut(s) 1225
OliI CACNNNNGTG 1 cut(s) 489
PagI TCATGA 1 cut(s) 810
PasI CCCWGGG 1 cut(s) 1092
PceI AGGCCT 1 cut(s) 600
PciSI GCTCTTC 1 cut(s) 352
PcsI WCGNNNNNNNCGW 1 cut(s) 466
PctI GAATGC 1 cut(s) 747
PfeI GAWTC 3 cut(s) 295, 820, 1311
PflFI GACNNNGTC 1 cut(s) 557
PflMI CCANNNNNTGG 1 cut(s) 369
PfoI TCCNGGA 2 cut(s) 224, 647
PkrI GCNGC 6 cut(s) 176, 203, 263, 730, 872, 1099
PleI GAGTC 2 cut(s) 243, 349
PpsI GAGTC 2 cut(s) 243, 349
Ppu21I YACGTR 1 cut(s) 1049
PsiI TTATAA 1 cut(s) 440
Psp124BI GAGCTC 2 cut(s) 316, 1271
Psp6I CCWGG 3 cut(s) 119, 647, 1091
PspGI CCWGG 3 cut(s) 119, 647, 1091
PspN4I GGNNCC 2 cut(s) 485, 1352
PspPI GGNCC 2 cut(s) 1251, 1350
PsuI RGATCY 3 cut(s) 16, 37, 1055
PsyI GACNNNGTC 1 cut(s) 557
PvuII CAGCTG 1 cut(s) 1100
RsaI GTAC 3 cut(s) 257, 994, 1037
RsaNI GTAC 3 cut(s) 256, 993, 1036
RseI CAYNNNNRTG 4 cut(s) 489, 536, 809, 815
SacI GAGCTC 2 cut(s) 316, 1271
SapI GCTCTTC 1 cut(s) 352
SaqAI TTAA 1 cut(s) 792
SatI GCNGC 6 cut(s) 175, 202, 262, 729, 871, 1098
Sau3AI GATC 5 cut(s) 16, 37, 109, 457, 1055
Sau96I GGNCC 2 cut(s) 1251, 1350
ScaI AGTACT 1 cut(s) 994
SchI GAGTC 2 cut(s) 243, 349
ScrFI CCNGG 5 cut(s) 121, 226, 649, 1093, 1382
SduI GDGCHC 2 cut(s) 316, 1271
SfaNI GCATC 3 cut(s) 91, 104, 646
SfcI CTRYAG 1 cut(s) 184
SinI GGWCC 2 cut(s) 1251, 1350
SmiMI CAYNNNNRTG 4 cut(s) 489, 536, 809, 815
SmlI CTYRAG 1 cut(s) 1118
SmoI CTYRAG 1 cut(s) 1118
Sse9I AATT 3 cut(s) 409, 587, 711
SseBI AGGCCT 1 cut(s) 600
SsiI CCGC 8 cut(s) 14, 168, 174, 201, 243, 261, 386, 980
SspMI CTAG 4 cut(s) 150, 632, 1218, 1390
SstI GAGCTC 2 cut(s) 316, 1271
StuI AGGCCT 1 cut(s) 600
StyD4I CCNGG 5 cut(s) 119, 224, 647, 1091, 1380
StyI CCWWGG 5 cut(s) 279, 335, 363, 487, 1212
TaaI ACNGT 3 cut(s) 785, 862, 1083
TaiI ACGT 2 cut(s) 1051, 1287
TaqI TCGA 2 cut(s) 112, 460
TaqII GACCGA 1 cut(s) 483
TasI AATT 3 cut(s) 409, 587, 711
TatI WGTACW 2 cut(s) 992, 1035
TauI GCSGC 3 cut(s) 177, 204, 264
TfiI GAWTC 3 cut(s) 295, 820, 1311
Tru1I TTAA 1 cut(s) 792
Tru9I TTAA 1 cut(s) 792
TscAI CASTG 3 cut(s) 82, 100, 846
TseFI GTSAC 3 cut(s) 286, 1012, 1074
TseI GCWGC 3 cut(s) 728, 870, 1097
Tsp45I GTSAC 3 cut(s) 286, 1012, 1074
TspDTI ATGAA 4 cut(s) 690, 745, 793, 1170
TspGWI ACGGA 2 cut(s) 205, 588
TspRI CASTG 3 cut(s) 82, 100, 846
Tth111I GACNNNGTC 1 cut(s) 557
Van91I CCANNNNNTGG 1 cut(s) 369
VpaK11BI GGWCC 2 cut(s) 1251, 1350
XapI RAATTY 2 cut(s) 409, 587
XceI RCATGY 1 cut(s) 1225
XspI CTAG 4 cut(s) 150, 632, 1218, 1390
ZrmI AGTACT 1 cut(s) 994
Zsp2I ATGCAT 1 cut(s) 661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.