Rh4BG215700

Serine incorporator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0011082
Physical Location & Seq
Reverse (-)
37515258 .. 37518925
3668 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG215700.1

Sequence Viewer

Length: 1230 bp
ATGTCGTGCTTGTGCTCTTGCTGCAGCGCTTCCACTTGCGGCCTCTGCTCCTCCGTGGCCTCCGGGATTTCCAGCAAATCCGCGAGACTCGGGTACTGCGGCCTCTTCGGGCTTTCCTTGGTCGTCACTTGGATTCTTAGAGAAGTTGGAGCTCCTCTCTTGGAGAAAATCCCATGGATAAGCTCTTCCGAGACTCACACCAAGGCATGGTATCAAATACAAGCGGTTCTTCGGGTGAGCATGGGGAATTTCTTGTTTTTTGCGATACTTGCGCTTATAATGATTGGTGTGAAGGATCGAAATGACCGACGAGATGGCTGGCACCATGGTGGATGGATTGCCAAGATGGTCATCTGGCTTTTGCTTGTCATTCTCATGTTTTTTCTTCCAGACATTGTCATCACAATCTATGGAGATATATCAAAATTTGGGGCAGGCCTGTTTTTACTGGTTCAAGTGATTATCTTACTGGACTTTACTCACTCCTGGAATGATGCATGGGTGGAGAAAGATGAACAAAAATGGTATATCGCTTTGCTTGCTATATCAATTGGGTGCTATATTGCAGCATTTGTGTTCTTAGGCATTCTGTTCATTTGGTTCAATCCCTCTGGCAATGACTGTGGCCTTAATGTCTTCTTCATTGTCATGACCATGATTCTGGCATTTGCATTTGCAGTGATTGCATTACACCCAACGGTGAATGGCAGCCTCCTTCCTGCTTCTGTTATATCAGTATATTGTGCTTATGTGTGCTACACGGCTCTTTCCTGTGAGCCTGTTGGCTATGCTTGCAATGGTCTTCACCACTCCAGCGCGGTCTCTTTTAGTACTACTCTTCTTGGGATGGTGACGACCATTCTTTCAGTTCTGTACTCTGCATTACGTGCTGGATCTTCAACAACTTTTCTGTCACCACCGTCTTCACCCAGGGCAGCTGAAAAGAAACCTCTTCTTGAGGGGAAAGAGTTGGAAGAAGGGAAAGAAAAGAATGAAAAAGAAGCACAACCTGTCAGCTATTCCTATACATTTTTCCACCTGATATTTGCCTTGGCTAGCATGTATTCAGCCATGCTTCTTTCGGGTTGGACCAACACATCAGAGAGCTCAGACCTTATAGACGTTGGCTGGACATCAGTTTGGGTGCGAATCTGCACAGAATGGGTTACTGCTGGACTATATGTTTGGTCCCTTGTAGCTCCTTTACTTTTCCCAGACCGGGAGTTCTAG

Protein Analysis

409

Amino Acids

45.09

Weight (kDa)

5.91

Isoelectric Point (pI)

31.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Serinc PF03348 6 - 407 9.7e-121 Serine incorporator (Serinc)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 278
AccB1I GGYRCC 1 cut(s) 321
AccB7I CCANNNNNTGG 1 cut(s) 207
AccII CGCG 2 cut(s) 83, 818
AciI CCGC 5 cut(s) 39, 81, 99, 224, 818
AclWI GGATC 2 cut(s) 303, 901
AcsI RAATTY 2 cut(s) 247, 425
AfaI GTAC 3 cut(s) 95, 832, 875
AfeI AGCGCT 1 cut(s) 28
AfiI CCNNNNNNNGG 2 cut(s) 207, 1219
AgsI TTSAA 3 cut(s) 455, 604, 900
AjnI CCWGG 2 cut(s) 485, 929
AleI CACNNNNGTG 1 cut(s) 327
AluBI AGCT 6 cut(s) 152, 183, 938, 1017, 1107, 1199
AluI AGCT 6 cut(s) 152, 183, 938, 1017, 1107, 1199
Alw21I GWGCWC 3 cut(s) 17, 154, 1109
Alw26I GTCTC 3 cut(s) 79, 185, 826
AlwI GGATC 2 cut(s) 303, 901
Ama87I CYCGRG 1 cut(s) 89
Aor51HI AGCGCT 1 cut(s) 28
AoxI GGCC 5 cut(s) 40, 57, 100, 436, 625
ApeKI GCWGC 5 cut(s) 21, 24, 566, 708, 935
ApoI RAATTY 2 cut(s) 247, 425
ArsI GACNNNNNNTTYG 2 cut(s) 1167, 1199
AspLEI GCGC 3 cut(s) 29, 274, 818
AspS9I GGNCC 2 cut(s) 1089, 1188
AsuC2I CCSGG 2 cut(s) 64, 1220
AsuHPI GGTGA 6 cut(s) 247, 712, 797, 862, 906, 918
AsuNHI GCTAGC 1 cut(s) 1055
AvaI CYCGRG 1 cut(s) 89
AvaII GGWCC 2 cut(s) 1089, 1188
BanI GGYRCC 1 cut(s) 321
BanII GRGCYC 2 cut(s) 154, 1109
BbsI GAAGAC 3 cut(s) 628, 794, 915
Bbv12I GWGCWC 3 cut(s) 17, 154, 1109
BbvI GCAGC 5 cut(s) 8, 36, 578, 720, 947
BccI CCATC 4 cut(s) 308, 327, 340, 841
BceAI ACGGC 1 cut(s) 777
BciT130I CCWGG 2 cut(s) 487, 931
BcnI CCSGG 2 cut(s) 64, 1220
BcoDI GTCTC 3 cut(s) 79, 185, 826
BfaI CTAG 2 cut(s) 1056, 1228
BfmI CTRYAG 1 cut(s) 22
BfoI RGCGCY 1 cut(s) 30
BisI GCNGC 7 cut(s) 22, 25, 40, 100, 567, 709, 936
BlsI GCNGC 7 cut(s) 23, 26, 41, 101, 568, 710, 937
BmcAI AGTACT 1 cut(s) 832
Bme1390I CCNGG 4 cut(s) 64, 487, 931, 1220
Bme18I GGWCC 2 cut(s) 1089, 1188
BmeT110I CYCGRG 1 cut(s) 89
BmgT120I GGNCC 2 cut(s) 1089, 1188
BmiI GGNNCC 2 cut(s) 323, 1190
BmrFI CCNGG 4 cut(s) 64, 487, 931, 1220
BmsI GCATC 1 cut(s) 484
BmtI GCTAGC 1 cut(s) 1059
BpiI GAAGAC 3 cut(s) 628, 794, 915
BplI GAGNNNNNCTC 2 cut(s) 141, 173
BpmI CTGGAG 1 cut(s) 796
BpuEI CTTGAG 1 cut(s) 977
BpuMI CCSGG 2 cut(s) 64, 1220
BsaAI YACGTR 1 cut(s) 887
BsaBI GATNNNNATC 1 cut(s) 350
BsaI GGTCTC 1 cut(s) 826
BsaJI CCNNGG 8 cut(s) 54, 117, 173, 201, 325, 929, 930, 1050
Bsc4I CCNNNNNNNGG 2 cut(s) 207, 1219
Bse1I ACTGG 2 cut(s) 453, 474
Bse3DI GCAATG 2 cut(s) 622, 802
Bse8I GATNNNNATC 1 cut(s) 350
BseBI CCWGG 2 cut(s) 487, 931
BseDI CCNNGG 8 cut(s) 54, 117, 173, 201, 325, 929, 930, 1050
BseGI GGATG 2 cut(s) 338, 852
BseJI GATNNNNATC 1 cut(s) 350
BseLI CCNNNNNNNGG 2 cut(s) 207, 1219
BseMI GCAATG 2 cut(s) 622, 802
BseMII CTCAG 1 cut(s) 1122
BseNI ACTGG 2 cut(s) 453, 474
BseRI GAGGAG 2 cut(s) 40, 144
BseXI GCAGC 5 cut(s) 8, 36, 578, 720, 947
BsgI GTGCAG 1 cut(s) 1138
Bsh1236I CGCG 2 cut(s) 83, 818
BshFI GGCC 5 cut(s) 42, 59, 102, 438, 627
BshNI GGYRCC 1 cut(s) 321
BsiHKAI GWGCWC 3 cut(s) 17, 154, 1109
BsiHKCI CYCGRG 1 cut(s) 89
BsiSI CCGG 2 cut(s) 63, 1219
BslFI GGGAC 1 cut(s) 1174
BslI CCNNNNNNNGG 2 cut(s) 207, 1219
BsmAI GTCTC 3 cut(s) 79, 185, 826
BsmFI GGGAC 1 cut(s) 1174
BsmI GAATGC 1 cut(s) 585
BsnI GGCC 5 cut(s) 42, 59, 102, 438, 627
Bso31I GGTCTC 1 cut(s) 826
BsoBI CYCGRG 1 cut(s) 89
Bsp1286I GDGCHC 3 cut(s) 17, 154, 1109
Bsp143I GATC 2 cut(s) 295, 893
Bsp19I CCATGG 2 cut(s) 173, 325
BspACI CCGC 5 cut(s) 39, 81, 99, 224, 818
BspANI GGCC 5 cut(s) 42, 59, 102, 438, 627
BspCNI CTCAG 1 cut(s) 1121
BspFNI CGCG 2 cut(s) 83, 818
BspHI TCATGA 1 cut(s) 648
BspLI GGNNCC 2 cut(s) 323, 1190
BspMAI CTGCAG 1 cut(s) 26
BspOI GCTAGC 1 cut(s) 1059
BspPI GGATC 2 cut(s) 303, 901
BspQI GCTCTTC 1 cut(s) 190
BspT107I GGYRCC 1 cut(s) 321
BspTNI GGTCTC 1 cut(s) 826
BsrDI GCAATG 2 cut(s) 622, 802
BsrI ACTGG 2 cut(s) 453, 474
BssECI CCNNGG 8 cut(s) 54, 117, 173, 201, 325, 929, 930, 1050
BssMI GATC 2 cut(s) 295, 893
BssT1I CCWWGG 5 cut(s) 117, 173, 201, 325, 1050
Bst2UI CCWGG 2 cut(s) 487, 931
Bst4CI ACNGT 3 cut(s) 623, 700, 921
Bst6I CTCTTC 4 cut(s) 110, 190, 843, 957
BstAPI GCANNNNNTGC 2 cut(s) 683, 887
BstBAI YACGTR 1 cut(s) 887
BstC8I GCNNGC 5 cut(s) 320, 436, 540, 793, 1057
BstDEI CTNAG 3 cut(s) 137, 580, 1108
BstDSI CCRYGG 3 cut(s) 54, 173, 325
BstF5I GGATG 2 cut(s) 338, 852
BstFNI CGCG 2 cut(s) 83, 818
BstH2I RGCGCY 1 cut(s) 30
BstHHI GCGC 3 cut(s) 29, 274, 818
BstKTI GATC 2 cut(s) 298, 896
BstMAI GTCTC 3 cut(s) 79, 185, 826
BstMBI GATC 2 cut(s) 295, 893
BstMWI GCNNNNNNNGC 7 cut(s) 21, 45, 269, 539, 683, 792, 887
BstNI CCWGG 2 cut(s) 487, 931
BstNSI RCATGY 1 cut(s) 1063
BstSCI CCNGG 4 cut(s) 62, 485, 929, 1218
BstSFI CTRYAG 1 cut(s) 22
BstUI CGCG 2 cut(s) 83, 818
BstV1I GCAGC 5 cut(s) 8, 36, 578, 720, 947
BstV2I GAAGAC 3 cut(s) 628, 794, 915
BstX2I RGATCY 1 cut(s) 893
BstXI CCANNNNNNTGG 1 cut(s) 661
BstYI RGATCY 1 cut(s) 893
BsuRI GGCC 5 cut(s) 42, 59, 102, 438, 627
BtgI CCRYGG 3 cut(s) 54, 173, 325
BtsCI GGATG 2 cut(s) 338, 852
BtsI GCAGTG 1 cut(s) 684
BtsIMutI CAGTG 1 cut(s) 684
Cac8I GCNNGC 5 cut(s) 320, 436, 540, 793, 1057
CciI TCATGA 1 cut(s) 648
CfoI GCGC 3 cut(s) 29, 274, 818
Cfr13I GGNCC 2 cut(s) 1089, 1188
Csp6I GTAC 3 cut(s) 94, 831, 874
CspCI CAANNNNNGTGG 2 cut(s) 604, 639
CviQI GTAC 3 cut(s) 94, 831, 874
DdeI CTNAG 3 cut(s) 137, 580, 1108
DpnI GATC 2 cut(s) 297, 895
DpnII GATC 2 cut(s) 295, 893
Eam1104I CTCTTC 4 cut(s) 110, 190, 843, 957
EarI CTCTTC 4 cut(s) 110, 190, 843, 957
Ecl136II GAGCTC 2 cut(s) 152, 1107
Eco130I CCWWGG 5 cut(s) 117, 173, 201, 325, 1050
Eco147I AGGCCT 1 cut(s) 438
Eco24I GRGCYC 2 cut(s) 154, 1109
Eco31I GGTCTC 1 cut(s) 826
Eco47I GGWCC 2 cut(s) 1089, 1188
Eco47III AGCGCT 1 cut(s) 28
Eco53kI GAGCTC 2 cut(s) 152, 1107
Eco88I CYCGRG 1 cut(s) 89
EcoICRI GAGCTC 2 cut(s) 152, 1107
EcoRII CCWGG 2 cut(s) 485, 929
EcoT14I CCWWGG 5 cut(s) 117, 173, 201, 325, 1050
EcoT22I ATGCAT 1 cut(s) 499
EcoT38I GRGCYC 2 cut(s) 154, 1109
ErhI CCWWGG 5 cut(s) 117, 173, 201, 325, 1050
FalI AAGNNNNNCTT 2 cut(s) 213, 245
FaqI GGGAC 1 cut(s) 1174
Fnu4HI GCNGC 7 cut(s) 22, 25, 40, 100, 567, 709, 936
FokI GGATG 2 cut(s) 345, 859
FriOI GRGCYC 2 cut(s) 154, 1109
Fsp4HI GCNGC 7 cut(s) 22, 25, 40, 100, 567, 709, 936
FspBI CTAG 2 cut(s) 1056, 1228
GlaI GCGC 3 cut(s) 28, 273, 817
GluI GCNGC 7 cut(s) 22, 25, 40, 100, 567, 709, 936
GsuI CTGGAG 1 cut(s) 796
HaeII RGCGCY 1 cut(s) 30
HaeIII GGCC 5 cut(s) 42, 59, 102, 438, 627
HapII CCGG 2 cut(s) 63, 1219
HhaI GCGC 3 cut(s) 29, 274, 818
Hin6I GCGC 3 cut(s) 27, 272, 816
HinP1I GCGC 3 cut(s) 27, 272, 816
HinfI GANTC 5 cut(s) 87, 133, 193, 658, 1149
HpaII CCGG 2 cut(s) 63, 1219
HphI GGTGA 6 cut(s) 247, 712, 797, 862, 906, 918
Hpy188I TCNGA 3 cut(s) 190, 1102, 1111
Hpy188III TCNNGA 3 cut(s) 389, 649, 956
Hpy99I CGWCG 1 cut(s) 312
HpyAV CCTTC 3 cut(s) 286, 725, 971
HpyCH4III ACNGT 3 cut(s) 623, 700, 921
HpyCH4IV ACGT 2 cut(s) 886, 1122
HpyCH4V TGCA 9 cut(s) 24, 497, 566, 671, 677, 686, 795, 881, 1155
HpyF10VI GCNNNNNNNGC 7 cut(s) 21, 45, 269, 539, 683, 792, 887
HpyF3I CTNAG 3 cut(s) 137, 580, 1108
HpySE526I ACGT 2 cut(s) 886, 1122
HspAI GCGC 3 cut(s) 27, 272, 816
Kzo9I GATC 2 cut(s) 295, 893
LguI GCTCTTC 1 cut(s) 190
LmnI GCTCC 4 cut(s) 53, 149, 157, 1204
Lsp1109I GCAGC 5 cut(s) 8, 36, 578, 720, 947
LweI GCATC 1 cut(s) 484
MaeI CTAG 2 cut(s) 1056, 1228
MaeII ACGT 2 cut(s) 886, 1122
MaeIII GTNAC 4 cut(s) 124, 850, 912, 1165
MalI GATC 2 cut(s) 297, 895
MboI GATC 2 cut(s) 295, 893
MfeI CAATTG 1 cut(s) 549
MflI RGATCY 1 cut(s) 893
MhlI GDGCHC 3 cut(s) 17, 154, 1109
MluCI AATT 3 cut(s) 247, 425, 549
MlyI GAGTC 2 cut(s) 81, 187
MmeI TCCRAC 3 cut(s) 127, 951, 1067
MnlI CCTC 9 cut(s) 53, 61, 70, 113, 165, 619, 722, 952, 960
Mph1103I ATGCAT 1 cut(s) 499
MseI TTAA 1 cut(s) 630
MslI CAYNNNNRTG 4 cut(s) 327, 374, 647, 653
MspA1I CMGCKG 1 cut(s) 938
MspI CCGG 2 cut(s) 63, 1219
MspR9I CCNGG 4 cut(s) 64, 487, 931, 1220
MunI CAATTG 1 cut(s) 549
Mva1269I GAATGC 1 cut(s) 585
MvaI CCWGG 2 cut(s) 487, 931
MvnI CGCG 2 cut(s) 83, 818
MwoI GCNNNNNNNGC 7 cut(s) 21, 45, 269, 539, 683, 792, 887
NciI CCSGG 2 cut(s) 64, 1220
NcoI CCATGG 2 cut(s) 173, 325
NdeII GATC 2 cut(s) 295, 893
NheI GCTAGC 1 cut(s) 1055
NlaIV GGNNCC 2 cut(s) 323, 1190
NmuCI GTSAC 3 cut(s) 124, 850, 912
NsiI ATGCAT 1 cut(s) 499
NspI RCATGY 1 cut(s) 1063
OliI CACNNNNGTG 1 cut(s) 327
PagI TCATGA 1 cut(s) 648
PasI CCCWGGG 1 cut(s) 930
PceI AGGCCT 1 cut(s) 438
PciSI GCTCTTC 1 cut(s) 190
PcsI WCGNNNNNNNCGW 1 cut(s) 304
PctI GAATGC 1 cut(s) 585
PfeI GAWTC 3 cut(s) 133, 658, 1149
PflFI GACNNNGTC 1 cut(s) 395
PflMI CCANNNNNTGG 1 cut(s) 207
PfoI TCCNGGA 2 cut(s) 62, 485
PkrI GCNGC 7 cut(s) 23, 26, 41, 101, 568, 710, 937
PleI GAGTC 2 cut(s) 81, 187
PpsI GAGTC 2 cut(s) 81, 187
Ppu21I YACGTR 1 cut(s) 887
PsiI TTATAA 1 cut(s) 278
Psp124BI GAGCTC 2 cut(s) 154, 1109
Psp6I CCWGG 2 cut(s) 485, 929
PspGI CCWGG 2 cut(s) 485, 929
PspN4I GGNNCC 2 cut(s) 323, 1190
PspPI GGNCC 2 cut(s) 1089, 1188
PstI CTGCAG 1 cut(s) 26
PsuI RGATCY 1 cut(s) 893
PsyI GACNNNGTC 1 cut(s) 395
PvuII CAGCTG 1 cut(s) 938
RsaI GTAC 3 cut(s) 95, 832, 875
RsaNI GTAC 3 cut(s) 94, 831, 874
RseI CAYNNNNRTG 4 cut(s) 327, 374, 647, 653
SacI GAGCTC 2 cut(s) 154, 1109
SapI GCTCTTC 1 cut(s) 190
SaqAI TTAA 1 cut(s) 630
SatI GCNGC 7 cut(s) 22, 25, 40, 100, 567, 709, 936
Sau3AI GATC 2 cut(s) 295, 893
Sau96I GGNCC 2 cut(s) 1089, 1188
ScaI AGTACT 1 cut(s) 832
SchI GAGTC 2 cut(s) 81, 187
ScrFI CCNGG 4 cut(s) 64, 487, 931, 1220
SduI GDGCHC 3 cut(s) 17, 154, 1109
SfaNI GCATC 1 cut(s) 484
SfcI CTRYAG 1 cut(s) 22
SinI GGWCC 2 cut(s) 1089, 1188
SmiMI CAYNNNNRTG 4 cut(s) 327, 374, 647, 653
SmlI CTYRAG 1 cut(s) 956
SmoI CTYRAG 1 cut(s) 956
Sse9I AATT 3 cut(s) 247, 425, 549
SseBI AGGCCT 1 cut(s) 438
SsiI CCGC 5 cut(s) 39, 81, 99, 224, 818
SspMI CTAG 2 cut(s) 1056, 1228
SstI GAGCTC 2 cut(s) 154, 1109
StuI AGGCCT 1 cut(s) 438
StyD4I CCNGG 4 cut(s) 62, 485, 929, 1218
StyI CCWWGG 5 cut(s) 117, 173, 201, 325, 1050
TaaI ACNGT 3 cut(s) 623, 700, 921
TaiI ACGT 2 cut(s) 889, 1125
TaqI TCGA 1 cut(s) 298
TaqII GACCGA 1 cut(s) 321
TasI AATT 3 cut(s) 247, 425, 549
TatI WGTACW 2 cut(s) 830, 873
TauI GCSGC 2 cut(s) 42, 102
TfiI GAWTC 3 cut(s) 133, 658, 1149
Tru1I TTAA 1 cut(s) 630
Tru9I TTAA 1 cut(s) 630
TscAI CASTG 1 cut(s) 684
TseFI GTSAC 3 cut(s) 124, 850, 912
TseI GCWGC 5 cut(s) 21, 24, 566, 708, 935
Tsp45I GTSAC 3 cut(s) 124, 850, 912
TspDTI ATGAA 4 cut(s) 528, 583, 631, 1008
TspGWI ACGGA 1 cut(s) 43
TspRI CASTG 1 cut(s) 684
Tth111I GACNNNGTC 1 cut(s) 395
Van91I CCANNNNNTGG 1 cut(s) 207
VpaK11BI GGWCC 2 cut(s) 1089, 1188
XapI RAATTY 2 cut(s) 247, 425
XceI RCATGY 1 cut(s) 1063
XspI CTAG 2 cut(s) 1056, 1228
ZrmI AGTACT 1 cut(s) 832
Zsp2I ATGCAT 1 cut(s) 499
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.