Rmu_sc0001940.1_g000017

protein kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001940.1
OG0007828
Physical Location & Seq
Forward (+)
55196 .. 55792
597 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001940.1_g000017.1.cds

Sequence Viewer

Length: 597 bp
atggaagacacgaatatcaagaagcgaggtcgggactacgagtccgactcggagcacgactcggtcgaagttaagcgacttagagacgacctactggacttcctcgacgattccgatcccgttccggcgactcaggacctcgactcgttcatgaagagcttcgaggaagagatctccaattcttgctcaacttcgcctcgtccggcgccggacattgccgcagctccggtgccggtggttgatcttacgtcagattccggcgagtccaatccggatctcgcacaccttctagaagcgtctgatgatgagctcggccttccgccgtccggcgggtttagcggtgaggcggcgaacgacagagagtctgagttggtcagagtgtcgtctgactcgtccggaatcggcgagttgtggcggtttgatgaccagggtccgagttacgattcgttcgagtttaacggcggagctggtaatcactttgatgacagcggttacggggcgtttgatggcctgttcgagcactcagatgtgtattttgaatcgtctgattactccgatttttcgtggcgtttcgaaacgctgcctgcggaggagtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

198

Amino Acids

21.76

Weight (kDa)

4.05

Isoelectric Point (pI)

52.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 205, 229
AccIII TCCGGA 2 cut(s) 271, 395
AciI CCGC 9 cut(s) 219, 320, 330, 339, 347, 415, 462, 489, 587
AclWI GGATC 2 cut(s) 110, 282
AcyI GRCGYC 1 cut(s) 206
AfiI CCNNNNNNNGG 2 cut(s) 326, 329
AgsI TTSAA 1 cut(s) 539
AhdI GACNNNNNGTC 2 cut(s) 40, 361
AjnI CCWGG 1 cut(s) 426
AluBI AGCT 4 cut(s) 159, 224, 310, 467
AluI AGCT 4 cut(s) 159, 224, 310, 467
Alw21I GWGCWC 3 cut(s) 57, 312, 522
Alw26I GTCTC 1 cut(s) 78
AlwI GGATC 2 cut(s) 110, 282
Aor13HI TCCGGA 2 cut(s) 271, 395
AoxI GGCC 2 cut(s) 313, 508
ApeKI GCWGC 2 cut(s) 221, 580
Asp700I GAANNNNTTC 1 cut(s) 158
AspLEI GCGC 1 cut(s) 208
AspS9I GGNCC 2 cut(s) 136, 431
AsuHPI GGTGA 1 cut(s) 353
AsuII TTCGAA 1 cut(s) 573
AvaII GGWCC 2 cut(s) 136, 431
BanI GGYRCC 2 cut(s) 205, 229
BanII GRGCYC 1 cut(s) 312
BbsI GAAGAC 1 cut(s) 12
Bbv12I GWGCWC 3 cut(s) 57, 312, 522
BbvI GCAGC 2 cut(s) 233, 567
BccI CCATC 1 cut(s) 500
BceAI ACGGC 2 cut(s) 307, 475
BciT130I CCWGG 1 cut(s) 428
BcoDI GTCTC 1 cut(s) 78
BfaI CTAG 1 cut(s) 290
BfoI RGCGCY 1 cut(s) 209
BglII AGATCT 1 cut(s) 171
BisI GCNGC 4 cut(s) 219, 222, 348, 581
BlsI GCNGC 4 cut(s) 220, 223, 349, 582
Bme1390I CCNGG 1 cut(s) 428
Bme18I GGWCC 2 cut(s) 136, 431
BmeRI GACNNNNNGTC 2 cut(s) 40, 361
BmgT120I GGNCC 2 cut(s) 136, 431
BmiI GGNNCC 3 cut(s) 207, 231, 432
BmrFI CCNGG 1 cut(s) 428
BoxI GACNNNNGTC 1 cut(s) 429
BpiI GAAGAC 1 cut(s) 12
BplI GAGNNNNNCTC 4 cut(s) 32, 64, 44, 76
Bpu14I TTCGAA 1 cut(s) 573
BsaBI GATNNNNATC 1 cut(s) 114
BsaHI GRCGYC 1 cut(s) 206
BsaJI CCNNGG 1 cut(s) 427
BsaWI WCCGGW 3 cut(s) 226, 271, 395
Bsc4I CCNNNNNNNGG 2 cut(s) 326, 329
Bse118I RCCGGY 1 cut(s) 232
Bse1I ACTGG 1 cut(s) 99
Bse3DI GCAATG 1 cut(s) 213
Bse8I GATNNNNATC 1 cut(s) 114
BseAI TCCGGA 2 cut(s) 271, 395
BseBI CCWGG 1 cut(s) 428
BseDI CCNNGG 1 cut(s) 427
BseJI GATNNNNATC 1 cut(s) 114
BseLI CCNNNNNNNGG 2 cut(s) 326, 329
BseMI GCAATG 1 cut(s) 213
BseMII CTCAG 3 cut(s) 146, 357, 537
BseNI ACTGG 1 cut(s) 99
BseXI GCAGC 2 cut(s) 233, 567
Bsh1285I CGRYCG 1 cut(s) 66
BshFI GGCC 2 cut(s) 315, 510
BshNI GGYRCC 2 cut(s) 205, 229
BsiEI CGRYCG 1 cut(s) 66
BsiHKAI GWGCWC 3 cut(s) 57, 312, 522
BsiSI CCGG 9 cut(s) 125, 203, 209, 227, 233, 258, 272, 327, 396
BslFI GGGAC 1 cut(s) 47
BslI CCNNNNNNNGG 2 cut(s) 326, 329
BsmAI GTCTC 1 cut(s) 78
BsmBI CGTCTC 1 cut(s) 78
BsmFI GGGAC 1 cut(s) 47
BsnI GGCC 2 cut(s) 315, 510
Bsp119I TTCGAA 1 cut(s) 573
Bsp1286I GDGCHC 3 cut(s) 57, 312, 522
Bsp13I TCCGGA 2 cut(s) 271, 395
Bsp143I GATC 4 cut(s) 115, 171, 241, 274
BspACI CCGC 9 cut(s) 219, 320, 330, 339, 347, 415, 462, 489, 587
BspANI GGCC 2 cut(s) 315, 510
BspCNI CTCAG 3 cut(s) 145, 358, 536
BspEI TCCGGA 2 cut(s) 271, 395
BspHI TCATGA 1 cut(s) 150
BspLI GGNNCC 3 cut(s) 207, 231, 432
BspPI GGATC 2 cut(s) 110, 282
BspQI GCTCTTC 1 cut(s) 149
BspT104I TTCGAA 1 cut(s) 573
BspT107I GGYRCC 2 cut(s) 205, 229
BsrDI GCAATG 1 cut(s) 213
BsrFI RCCGGY 1 cut(s) 232
BsrI ACTGG 1 cut(s) 99
BssAI RCCGGY 1 cut(s) 232
BssECI CCNNGG 1 cut(s) 427
BssMI GATC 4 cut(s) 115, 171, 241, 274
BssNI GRCGYC 1 cut(s) 206
Bst2UI CCWGG 1 cut(s) 428
Bst6I CTCTTC 2 cut(s) 149, 162
BstACI GRCGYC 1 cut(s) 206
BstBI TTCGAA 1 cut(s) 573
BstC8I GCNNGC 1 cut(s) 585
BstDEI CTNAG 4 cut(s) 80, 132, 366, 523
BstH2I RGCGCY 1 cut(s) 209
BstHHI GCGC 1 cut(s) 208
BstKTI GATC 4 cut(s) 118, 174, 244, 277
BstMAI GTCTC 1 cut(s) 78
BstMBI GATC 4 cut(s) 115, 171, 241, 274
BstMCI CGRYCG 1 cut(s) 66
BstMWI GCNNNNNNNGC 1 cut(s) 336
BstNI CCWGG 1 cut(s) 428
BstPAI GACNNNNGTC 1 cut(s) 429
BstSCI CCNGG 1 cut(s) 426
BstV1I GCAGC 2 cut(s) 233, 567
BstV2I GAAGAC 1 cut(s) 12
BstX2I RGATCY 2 cut(s) 171, 274
BstYI RGATCY 2 cut(s) 171, 274
BsuRI GGCC 2 cut(s) 315, 510
Cac8I GCNNGC 1 cut(s) 585
CciI TCATGA 1 cut(s) 150
CfoI GCGC 1 cut(s) 208
Cfr10I RCCGGY 1 cut(s) 232
Cfr13I GGNCC 2 cut(s) 136, 431
CseI GACGC 1 cut(s) 285
CviAII CATG 1 cut(s) 151
CviJI RGCY 6 cut(s) 159, 224, 310, 315, 467, 510
CviKI_1 RGCY 6 cut(s) 159, 224, 310, 315, 467, 510
DdeI CTNAG 4 cut(s) 80, 132, 366, 523
DinI GGCGCC 1 cut(s) 207
DpnI GATC 4 cut(s) 117, 173, 243, 276
DpnII GATC 4 cut(s) 115, 171, 241, 274
DriI GACNNNNNGTC 2 cut(s) 40, 361
Eam1104I CTCTTC 2 cut(s) 149, 162
Eam1105I GACNNNNNGTC 2 cut(s) 40, 361
EarI CTCTTC 2 cut(s) 149, 162
EciI GGCGGA 2 cut(s) 309, 477
Ecl136II GAGCTC 1 cut(s) 310
Eco24I GRGCYC 1 cut(s) 312
Eco47I GGWCC 2 cut(s) 136, 431
Eco53kI GAGCTC 1 cut(s) 310
EcoICRI GAGCTC 1 cut(s) 310
EcoO109I RGGNCCY 1 cut(s) 136
EcoRII CCWGG 1 cut(s) 426
EcoT38I GRGCYC 1 cut(s) 312
EgeI GGCGCC 1 cut(s) 207
EheI GGCGCC 1 cut(s) 207
Esp3I CGTCTC 1 cut(s) 78
FaeI CATG 1 cut(s) 154
FaiI YATR 1 cut(s) 152
FaqI GGGAC 1 cut(s) 47
FatI CATG 1 cut(s) 150
FauI CCCGC 1 cut(s) 323
Fnu4HI GCNGC 4 cut(s) 219, 222, 348, 581
FriOI GRGCYC 1 cut(s) 312
Fsp4HI GCNGC 4 cut(s) 219, 222, 348, 581
FspBI CTAG 1 cut(s) 290
GlaI GCGC 1 cut(s) 207
GluI GCNGC 4 cut(s) 219, 222, 348, 581
HaeII RGCGCY 1 cut(s) 209
HaeIII GGCC 2 cut(s) 315, 510
HapII CCGG 9 cut(s) 125, 203, 209, 227, 233, 258, 272, 327, 396
HgaI GACGC 1 cut(s) 285
HhaI GCGC 1 cut(s) 208
Hin1I GRCGYC 1 cut(s) 206
Hin1II CATG 1 cut(s) 154
Hin6I GCGC 1 cut(s) 206
HinP1I GCGC 1 cut(s) 206
HpaII CCGG 9 cut(s) 125, 203, 209, 227, 233, 258, 272, 327, 396
HphI GGTGA 1 cut(s) 353
Hpy188III TCNNGA 7 cut(s) 19, 32, 134, 151, 272, 290, 396
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 2 cut(s) 296, 326
HpyCH4IV ACGT 1 cut(s) 248
HpyF10VI GCNNNNNNNGC 1 cut(s) 336
HpyF3I CTNAG 4 cut(s) 80, 132, 366, 523
HpySE526I ACGT 1 cut(s) 248
Hsp92I GRCGYC 1 cut(s) 206
Hsp92II CATG 1 cut(s) 154
HspAI GCGC 1 cut(s) 206
KasI GGCGCC 1 cut(s) 205
Kpn2I TCCGGA 2 cut(s) 271, 395
Kzo9I GATC 4 cut(s) 115, 171, 241, 274
LguI GCTCTTC 1 cut(s) 149
LmnI GCTCC 3 cut(s) 52, 229, 464
Lsp1109I GCAGC 2 cut(s) 233, 567
MaeI CTAG 1 cut(s) 290
MaeII ACGT 1 cut(s) 248
MaeIII GTNAC 2 cut(s) 437, 491
MalI GATC 4 cut(s) 117, 173, 243, 276
MboI GATC 4 cut(s) 115, 171, 241, 274
MboII GAAGA 3 cut(s) 17, 166, 179
MflI RGATCY 2 cut(s) 171, 274
MhlI GDGCHC 3 cut(s) 57, 312, 522
MluCI AATT 1 cut(s) 178
Mly113I GGCGCC 1 cut(s) 206
MlyI GAGTC 8 cut(s) 41, 50, 53, 124, 137, 272, 371, 383
MmeI TCCRAC 1 cut(s) 69
MnlI CCTC 7 cut(s) 20, 113, 149, 157, 207, 337, 583
MroI TCCGGA 2 cut(s) 271, 395
MroXI GAANNNNTTC 1 cut(s) 158
MseI TTAA 2 cut(s) 72, 456
MslI CAYNNNNRTG 2 cut(s) 480, 525
MspA1I CMGCKG 1 cut(s) 489
MspI CCGG 9 cut(s) 125, 203, 209, 227, 233, 258, 272, 327, 396
MspR9I CCNGG 1 cut(s) 428
MvaI CCWGG 1 cut(s) 428
MwoI GCNNNNNNNGC 1 cut(s) 336
NarI GGCGCC 1 cut(s) 206
NdeII GATC 4 cut(s) 115, 171, 241, 274
NlaIII CATG 1 cut(s) 154
NlaIV GGNNCC 3 cut(s) 207, 231, 432
NmeAIII GCCGAG 1 cut(s) 291
NspV TTCGAA 1 cut(s) 573
PagI TCATGA 1 cut(s) 150
PciSI GCTCTTC 1 cut(s) 149
PcsI WCGNNNNNNNCGW 4 cut(s) 63, 111, 389, 447
PdmI GAANNNNTTC 1 cut(s) 158
PfeI GAWTC 5 cut(s) 110, 254, 399, 443, 539
PflFI GACNNNGTC 1 cut(s) 62
PkrI GCNGC 4 cut(s) 220, 223, 349, 582
PleI GAGTC 8 cut(s) 41, 49, 53, 124, 137, 271, 370, 383
PluTI GGCGCC 1 cut(s) 209
PpsI GAGTC 8 cut(s) 41, 49, 53, 124, 137, 271, 370, 383
PpuMI RGGWCCY 1 cut(s) 136
PshAI GACNNNNGTC 1 cut(s) 429
Psp124BI GAGCTC 1 cut(s) 312
Psp5II RGGWCCY 1 cut(s) 136
Psp6I CCWGG 1 cut(s) 426
PspGI CCWGG 1 cut(s) 426
PspN4I GGNNCC 3 cut(s) 207, 231, 432
PspPI GGNCC 2 cut(s) 136, 431
PspPPI RGGWCCY 1 cut(s) 136
PsuI RGATCY 2 cut(s) 171, 274
PsyI GACNNNGTC 1 cut(s) 62
RseI CAYNNNNRTG 2 cut(s) 480, 525
SacI GAGCTC 1 cut(s) 312
SapI GCTCTTC 1 cut(s) 149
SaqAI TTAA 2 cut(s) 72, 456
SatI GCNGC 4 cut(s) 219, 222, 348, 581
Sau3AI GATC 4 cut(s) 115, 171, 241, 274
Sau96I GGNCC 2 cut(s) 136, 431
SchI GAGTC 8 cut(s) 41, 50, 53, 124, 137, 272, 371, 383
ScrFI CCNGG 1 cut(s) 428
SduI GDGCHC 3 cut(s) 57, 312, 522
SetI ASST 9 cut(s) 31, 93, 141, 161, 226, 251, 288, 312, 469
SfoI GGCGCC 1 cut(s) 207
SfuI TTCGAA 1 cut(s) 573
SinI GGWCC 2 cut(s) 136, 431
SmiMI CAYNNNNRTG 2 cut(s) 480, 525
Sse9I AATT 1 cut(s) 178
SsiI CCGC 9 cut(s) 219, 320, 330, 339, 347, 415, 462, 489, 587
SspDI GGCGCC 1 cut(s) 205
SspMI CTAG 1 cut(s) 290
SstI GAGCTC 1 cut(s) 312
StyD4I CCNGG 1 cut(s) 426
TaiI ACGT 1 cut(s) 251
TaqI TCGA 7 cut(s) 66, 105, 141, 162, 450, 516, 573
TaqII GACCGA 1 cut(s) 52
TasI AATT 1 cut(s) 178
TauI GCSGC 2 cut(s) 221, 350
TfiI GAWTC 5 cut(s) 110, 254, 399, 443, 539
Tru1I TTAA 2 cut(s) 72, 456
Tru9I TTAA 2 cut(s) 72, 456
TseI GCWGC 2 cut(s) 221, 580
TspDTI ATGAA 2 cut(s) 139, 167
Tth111I GACNNNGTC 1 cut(s) 62
VpaK11BI GGWCC 2 cut(s) 136, 431
XbaI TCTAGA 1 cut(s) 289
XmnI GAANNNNTTC 1 cut(s) 158
XspI CTAG 1 cut(s) 290
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.