Rh4DG342700

protein kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0007828
Physical Location & Seq
Forward (+)
56543234 .. 56544825
1592 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG342700.1

Sequence Viewer

Length: 840 bp
ATGAGAAAAAAGAAAAAATTTAAAAAAGGCAAGGCGTCCGTGATGGCCAAAGTATTCGATCCCACGCGCCCGCGTCACCATCACCACCCACACTCTCCCTTTCTCTCTCCACTTTCTCTCTCTAAATTGTCCCCCTATATATATCGATCGCTTCTCTCATCGCTTTTCCACACCACCACTGCTTTACGATCATCTGAAAAATCTCAACTGAAAAATCTTTCATCAGATTTTCTTCAATTTTTAATGGAAGACACGAATATGAAGAAGCGAGGTCGGGACTACGAGTCCGACTCGGAGCACGACTCGGTCGAAGTTAAGCGACTCAGAGACGACCTACTGGACTTCCTCGACGATTCCGATCCCGTTCCGGCGACTCAGGACCTCGACTCGTTCATGAAGAGCTTCGAGGAAGAGATCTCCAATTCTTGCTCAACGTCGCCTCGTCCGGCGCCGGACACCGCCGCAGCTCCGGTTCCGGTGGTCGATCTTACGTCAGATTCCGGCGAGTCCAATCCGGATCTCGCACACCTTCTAGAAGCGTCTGATGATGAGCTCGGCCTTCCGCCGTCCGGCGGGTTTAGCGGCGAGGAGGCGAACGACAGAGAGTCTGAGTTGGTCAGAGTGTCGTCTGACTCGTCCGGAATCGGCGAGTTGTGGCGGTTTGATGACCAGGGTCCGAGTTACGATTCGTTCGAGTTTAACGGCGGAGCTGGTAGTCAGTTTGATGACAGCGGTTACGGGGCGTTTGATGGCCTGTTCGAGCACTCAGATGTGTATTTTGAATCGTCTGATTACTCCGATTTTTCGTGGCGTTTCGAAACGCTGCCTGCGGAGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

279

Amino Acids

31.15

Weight (kDa)

4.65

Isoelectric Point (pI)

52.8

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 448
AccII CGCG 2 cut(s) 67, 73
AccIII TCCGGA 2 cut(s) 514, 638
AclWI GGATC 3 cut(s) 53, 353, 525
AcoI YGGCCR 1 cut(s) 45
AcsI RAATTY 1 cut(s) 17
AcyI GRCGYC 2 cut(s) 35, 449
AfiI CCNNNNNNNGG 2 cut(s) 569, 572
AgsI TTSAA 2 cut(s) 236, 782
AhdI GACNNNNNGTC 2 cut(s) 283, 604
AjnI CCWGG 1 cut(s) 669
AluBI AGCT 4 cut(s) 402, 467, 553, 710
AluI AGCT 4 cut(s) 402, 467, 553, 710
Alw21I GWGCWC 3 cut(s) 300, 555, 765
Alw26I GTCTC 1 cut(s) 321
AlwI GGATC 3 cut(s) 53, 353, 525
Aor13HI TCCGGA 2 cut(s) 514, 638
AoxI GGCC 3 cut(s) 45, 556, 751
ApeKI GCWGC 2 cut(s) 464, 823
ApoI RAATTY 1 cut(s) 17
Asp700I GAANNNNTTC 1 cut(s) 401
AspLEI GCGC 2 cut(s) 69, 451
AspS9I GGNCC 2 cut(s) 379, 674
AsuHPI GGTGA 2 cut(s) 68, 74
AsuII TTCGAA 1 cut(s) 816
AvaII GGWCC 2 cut(s) 379, 674
BalI TGGCCA 1 cut(s) 47
BanI GGYRCC 1 cut(s) 448
BanII GRGCYC 1 cut(s) 555
BbsI GAAGAC 1 cut(s) 255
Bbv12I GWGCWC 3 cut(s) 300, 555, 765
BbvI GCAGC 2 cut(s) 476, 810
BccI CCATC 3 cut(s) 37, 87, 743
BceAI ACGGC 2 cut(s) 550, 718
BciT130I CCWGG 1 cut(s) 671
BcoDI GTCTC 1 cut(s) 321
BfaI CTAG 1 cut(s) 533
BfoI RGCGCY 1 cut(s) 452
BglII AGATCT 1 cut(s) 414
BisI GCNGC 4 cut(s) 462, 465, 583, 824
BlsI GCNGC 4 cut(s) 463, 466, 584, 825
Bme1390I CCNGG 1 cut(s) 671
Bme18I GGWCC 2 cut(s) 379, 674
BmeRI GACNNNNNGTC 2 cut(s) 283, 604
BmgT120I GGNCC 2 cut(s) 379, 674
BmiI GGNNCC 3 cut(s) 450, 474, 675
BmrFI CCNGG 1 cut(s) 671
BoxI GACNNNNGTC 1 cut(s) 672
BpiI GAAGAC 1 cut(s) 255
BplI GAGNNNNNCTC 4 cut(s) 275, 307, 287, 319
Bpu14I TTCGAA 1 cut(s) 816
Bsa29I ATCGAT 1 cut(s) 145
BsaBI GATNNNNATC 1 cut(s) 357
BsaHI GRCGYC 2 cut(s) 35, 449
BsaJI CCNNGG 1 cut(s) 670
BsaWI WCCGGW 4 cut(s) 469, 475, 514, 638
Bsc4I CCNNNNNNNGG 2 cut(s) 569, 572
Bse1I ACTGG 1 cut(s) 342
Bse8I GATNNNNATC 1 cut(s) 357
BseAI TCCGGA 2 cut(s) 514, 638
BseBI CCWGG 1 cut(s) 671
BseCI ATCGAT 1 cut(s) 145
BseDI CCNNGG 1 cut(s) 670
BseJI GATNNNNATC 1 cut(s) 357
BseLI CCNNNNNNNGG 2 cut(s) 569, 572
BseMII CTCAG 4 cut(s) 337, 389, 600, 780
BseNI ACTGG 1 cut(s) 342
BseRI GAGGAG 1 cut(s) 602
BseXI GCAGC 2 cut(s) 476, 810
Bsh1236I CGCG 2 cut(s) 67, 73
Bsh1285I CGRYCG 2 cut(s) 149, 309
BshFI GGCC 3 cut(s) 47, 558, 753
BshNI GGYRCC 1 cut(s) 448
BshVI ATCGAT 1 cut(s) 145
BsiEI CGRYCG 2 cut(s) 149, 309
BsiHKAI GWGCWC 3 cut(s) 300, 555, 765
BsiSI CCGG 9 cut(s) 368, 446, 452, 470, 476, 501, 515, 570, 639
BslFI GGGAC 2 cut(s) 115, 290
BslI CCNNNNNNNGG 2 cut(s) 569, 572
BsmAI GTCTC 1 cut(s) 321
BsmBI CGTCTC 1 cut(s) 321
BsmFI GGGAC 2 cut(s) 115, 290
BsnI GGCC 3 cut(s) 47, 558, 753
Bsp119I TTCGAA 1 cut(s) 816
Bsp1286I GDGCHC 3 cut(s) 300, 555, 765
Bsp13I TCCGGA 2 cut(s) 514, 638
Bsp143I GATC 7 cut(s) 58, 146, 188, 358, 414, 484, 517
BspANI GGCC 3 cut(s) 47, 558, 753
BspCNI CTCAG 4 cut(s) 336, 388, 601, 779
BspDI ATCGAT 1 cut(s) 145
BspEI TCCGGA 2 cut(s) 514, 638
BspFNI CGCG 2 cut(s) 67, 73
BspHI TCATGA 1 cut(s) 393
BspLI GGNNCC 3 cut(s) 450, 474, 675
BspPI GGATC 3 cut(s) 53, 353, 525
BspQI GCTCTTC 1 cut(s) 392
BspT104I TTCGAA 1 cut(s) 816
BspT107I GGYRCC 1 cut(s) 448
BsrI ACTGG 1 cut(s) 342
BssECI CCNNGG 1 cut(s) 670
BssMI GATC 7 cut(s) 58, 146, 188, 358, 414, 484, 517
BssNI GRCGYC 2 cut(s) 35, 449
Bst2UI CCWGG 1 cut(s) 671
Bst6I CTCTTC 2 cut(s) 392, 405
BstACI GRCGYC 2 cut(s) 35, 449
BstBI TTCGAA 1 cut(s) 816
BstC8I GCNNGC 2 cut(s) 71, 828
BstDEI CTNAG 4 cut(s) 323, 375, 609, 766
BstFNI CGCG 2 cut(s) 67, 73
BstH2I RGCGCY 1 cut(s) 452
BstHHI GCGC 2 cut(s) 69, 451
BstKTI GATC 7 cut(s) 61, 149, 191, 361, 417, 487, 520
BstMAI GTCTC 1 cut(s) 321
BstMBI GATC 7 cut(s) 58, 146, 188, 358, 414, 484, 517
BstMCI CGRYCG 2 cut(s) 149, 309
BstMWI GCNNNNNNNGC 1 cut(s) 579
BstNI CCWGG 1 cut(s) 671
BstPAI GACNNNNGTC 1 cut(s) 672
BstSCI CCNGG 1 cut(s) 669
BstUI CGCG 2 cut(s) 67, 73
BstV1I GCAGC 2 cut(s) 476, 810
BstV2I GAAGAC 1 cut(s) 255
BstX2I RGATCY 2 cut(s) 414, 517
BstYI RGATCY 2 cut(s) 414, 517
Bsu15I ATCGAT 1 cut(s) 145
BsuRI GGCC 3 cut(s) 47, 558, 753
BsuTUI ATCGAT 1 cut(s) 145
BtgZI GCGATG 1 cut(s) 144
BtsI GCAGTG 1 cut(s) 177
BtsIMutI CAGTG 1 cut(s) 177
Cac8I GCNNGC 2 cut(s) 71, 828
CciI TCATGA 1 cut(s) 393
CfoI GCGC 2 cut(s) 69, 451
Cfr13I GGNCC 2 cut(s) 379, 674
ClaI ATCGAT 1 cut(s) 145
CseI GACGC 3 cut(s) 24, 62, 528
CviAII CATG 1 cut(s) 394
CviJI RGCY 7 cut(s) 47, 402, 467, 553, 558, 710, 753
CviKI_1 RGCY 7 cut(s) 47, 402, 467, 553, 558, 710, 753
DdeI CTNAG 4 cut(s) 323, 375, 609, 766
DinI GGCGCC 1 cut(s) 450
DpnI GATC 7 cut(s) 60, 148, 190, 360, 416, 486, 519
DpnII GATC 7 cut(s) 58, 146, 188, 358, 414, 484, 517
DraI TTTAAA 1 cut(s) 22
DriI GACNNNNNGTC 2 cut(s) 283, 604
EaeI YGGCCR 1 cut(s) 45
Eam1104I CTCTTC 2 cut(s) 392, 405
Eam1105I GACNNNNNGTC 2 cut(s) 283, 604
EarI CTCTTC 2 cut(s) 392, 405
EciI GGCGGA 2 cut(s) 552, 720
Ecl136II GAGCTC 1 cut(s) 553
Eco24I GRGCYC 1 cut(s) 555
Eco47I GGWCC 2 cut(s) 379, 674
Eco53kI GAGCTC 1 cut(s) 553
EcoICRI GAGCTC 1 cut(s) 553
EcoO109I RGGNCCY 1 cut(s) 379
EcoRII CCWGG 1 cut(s) 669
EcoT38I GRGCYC 1 cut(s) 555
EgeI GGCGCC 1 cut(s) 450
EheI GGCGCC 1 cut(s) 450
Esp3I CGTCTC 1 cut(s) 321
FaeI CATG 1 cut(s) 397
FaiI YATR 5 cut(s) 138, 140, 142, 260, 395
FaqI GGGAC 2 cut(s) 115, 290
FatI CATG 1 cut(s) 393
FauI CCCGC 2 cut(s) 78, 566
Fnu4HI GCNGC 4 cut(s) 462, 465, 583, 824
FriOI GRGCYC 1 cut(s) 555
Fsp4HI GCNGC 4 cut(s) 462, 465, 583, 824
FspBI CTAG 1 cut(s) 533
GlaI GCGC 2 cut(s) 68, 450
GluI GCNGC 4 cut(s) 462, 465, 583, 824
HaeII RGCGCY 1 cut(s) 452
HaeIII GGCC 3 cut(s) 47, 558, 753
HapII CCGG 9 cut(s) 368, 446, 452, 470, 476, 501, 515, 570, 639
HgaI GACGC 3 cut(s) 24, 62, 528
HhaI GCGC 2 cut(s) 69, 451
Hin1I GRCGYC 2 cut(s) 35, 449
Hin1II CATG 1 cut(s) 397
Hin6I GCGC 2 cut(s) 67, 449
HinP1I GCGC 2 cut(s) 67, 449
HpaII CCGG 9 cut(s) 368, 446, 452, 470, 476, 501, 515, 570, 639
HphI GGTGA 2 cut(s) 68, 74
Hpy188III TCNNGA 6 cut(s) 275, 377, 394, 515, 533, 639
Hpy99I CGWCG 2 cut(s) 353, 439
HpyAV CCTTC 2 cut(s) 539, 569
HpyCH4IV ACGT 2 cut(s) 434, 491
HpyF10VI GCNNNNNNNGC 1 cut(s) 579
HpyF3I CTNAG 4 cut(s) 323, 375, 609, 766
HpySE526I ACGT 2 cut(s) 434, 491
Hsp92I GRCGYC 2 cut(s) 35, 449
Hsp92II CATG 1 cut(s) 397
HspAI GCGC 2 cut(s) 67, 449
KasI GGCGCC 1 cut(s) 448
Kpn2I TCCGGA 2 cut(s) 514, 638
Kzo9I GATC 7 cut(s) 58, 146, 188, 358, 414, 484, 517
LguI GCTCTTC 1 cut(s) 392
LmnI GCTCC 3 cut(s) 295, 472, 707
Lsp1109I GCAGC 2 cut(s) 476, 810
MaeI CTAG 1 cut(s) 533
MaeII ACGT 2 cut(s) 434, 491
MaeIII GTNAC 3 cut(s) 74, 680, 734
MalI GATC 7 cut(s) 60, 148, 190, 360, 416, 486, 519
MboI GATC 7 cut(s) 58, 146, 188, 358, 414, 484, 517
MboII GAAGA 5 cut(s) 224, 260, 274, 409, 422
MflI RGATCY 2 cut(s) 414, 517
MhlI GDGCHC 3 cut(s) 300, 555, 765
MlsI TGGCCA 1 cut(s) 47
MluCI AATT 4 cut(s) 17, 125, 236, 421
MluNI TGGCCA 1 cut(s) 47
Mly113I GGCGCC 1 cut(s) 449
MlyI GAGTC 9 cut(s) 284, 293, 296, 315, 367, 380, 515, 614, 626
MmeI TCCRAC 1 cut(s) 312
MnlI CCTC 8 cut(s) 263, 356, 392, 400, 450, 580, 583, 826
Mox20I TGGCCA 1 cut(s) 47
MroI TCCGGA 2 cut(s) 514, 638
MroXI GAANNNNTTC 1 cut(s) 401
MscI TGGCCA 1 cut(s) 47
MseI TTAA 4 cut(s) 21, 242, 315, 699
MslI CAYNNNNRTG 2 cut(s) 257, 768
Msp20I TGGCCA 1 cut(s) 47
MspA1I CMGCKG 1 cut(s) 732
MspI CCGG 9 cut(s) 368, 446, 452, 470, 476, 501, 515, 570, 639
MspR9I CCNGG 1 cut(s) 671
MvaI CCWGG 1 cut(s) 671
MvnI CGCG 2 cut(s) 67, 73
MwoI GCNNNNNNNGC 1 cut(s) 579
NarI GGCGCC 1 cut(s) 449
NdeII GATC 7 cut(s) 58, 146, 188, 358, 414, 484, 517
NlaIII CATG 1 cut(s) 397
NlaIV GGNNCC 3 cut(s) 450, 474, 675
NmeAIII GCCGAG 1 cut(s) 534
NmuCI GTSAC 1 cut(s) 74
NspV TTCGAA 1 cut(s) 816
PagI TCATGA 1 cut(s) 393
PciSI GCTCTTC 1 cut(s) 392
PcsI WCGNNNNNNNCGW 4 cut(s) 306, 354, 632, 690
PdmI GAANNNNTTC 1 cut(s) 401
PfeI GAWTC 5 cut(s) 353, 497, 642, 686, 782
PflFI GACNNNGTC 1 cut(s) 305
PkrI GCNGC 4 cut(s) 463, 466, 584, 825
Ple19I CGATCG 1 cut(s) 149
PleI GAGTC 9 cut(s) 284, 292, 296, 315, 367, 380, 514, 613, 626
PluTI GGCGCC 1 cut(s) 452
PpsI GAGTC 9 cut(s) 284, 292, 296, 315, 367, 380, 514, 613, 626
PpuMI RGGWCCY 1 cut(s) 379
PshAI GACNNNNGTC 1 cut(s) 672
Psp124BI GAGCTC 1 cut(s) 555
Psp5II RGGWCCY 1 cut(s) 379
Psp6I CCWGG 1 cut(s) 669
PspGI CCWGG 1 cut(s) 669
PspN4I GGNNCC 3 cut(s) 450, 474, 675
PspPI GGNCC 2 cut(s) 379, 674
PspPPI RGGWCCY 1 cut(s) 379
PsuI RGATCY 2 cut(s) 414, 517
PsyI GACNNNGTC 1 cut(s) 305
PvuI CGATCG 1 cut(s) 149
RseI CAYNNNNRTG 2 cut(s) 257, 768
SacI GAGCTC 1 cut(s) 555
SapI GCTCTTC 1 cut(s) 392
SaqAI TTAA 4 cut(s) 21, 242, 315, 699
SatI GCNGC 4 cut(s) 462, 465, 583, 824
Sau3AI GATC 7 cut(s) 58, 146, 188, 358, 414, 484, 517
Sau96I GGNCC 2 cut(s) 379, 674
SchI GAGTC 9 cut(s) 284, 293, 296, 315, 367, 380, 515, 614, 626
ScrFI CCNGG 1 cut(s) 671
SduI GDGCHC 3 cut(s) 300, 555, 765
SfoI GGCGCC 1 cut(s) 450
SfuI TTCGAA 1 cut(s) 816
SinI GGWCC 2 cut(s) 379, 674
SmiMI CAYNNNNRTG 2 cut(s) 257, 768
Sse9I AATT 4 cut(s) 17, 125, 236, 421
SspDI GGCGCC 1 cut(s) 448
SspMI CTAG 1 cut(s) 533
SstI GAGCTC 1 cut(s) 555
StyD4I CCNGG 1 cut(s) 669
TaiI ACGT 2 cut(s) 437, 494
TaqII GACCGA 1 cut(s) 295
TasI AATT 4 cut(s) 17, 125, 236, 421
TauI GCSGC 2 cut(s) 464, 585
TfiI GAWTC 5 cut(s) 353, 497, 642, 686, 782
Tru1I TTAA 4 cut(s) 21, 242, 315, 699
Tru9I TTAA 4 cut(s) 21, 242, 315, 699
TscAI CASTG 1 cut(s) 184
TseFI GTSAC 1 cut(s) 74
TseI GCWGC 2 cut(s) 464, 823
Tsp45I GTSAC 1 cut(s) 74
TspDTI ATGAA 4 cut(s) 210, 275, 382, 410
TspGWI ACGGA 1 cut(s) 28
TspRI CASTG 1 cut(s) 184
Tth111I GACNNNGTC 1 cut(s) 305
VpaK11BI GGWCC 2 cut(s) 379, 674
XapI RAATTY 1 cut(s) 17
XbaI TCTAGA 1 cut(s) 532
XmnI GAANNNNTTC 1 cut(s) 401
XspI CTAG 1 cut(s) 533
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.