Rroxscaffold_1G00032220

protein kinase activity

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
Physical Location & Seq
Reverse (-)
46032600 .. 46039151
6552 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00032220.1

Sequence Viewer

Length: 348 bp
ATGACTGAAGATAATCTAGAAGGTCAACACCTTGCTCGCCTTTTTCCTTCATTGTCTACACCACTACTTGACTACCTTACAACACTTGAACCTACTCCTACAATACTTGAACCTACTTTAAGTTGGGAGCTACCAGTTCGACTCGGAGACTCGGTCGAAGTTAAGCGACTTAGAGAAGACCTAATGGACTTCCTCGACGATTCCAATCCCGTTCCGACAACGAGACTCATTCATGAAAGGCTTCGAGGAAGAGATCTCCAATTCTTGTTCAACGTCGCCTCCTCCAACTCGGACACCGCCTCGGCTACGATGCCGGTGGTCGATCTCACATCGATTTCGGCGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

115

Amino Acids

12.88

Weight (kDa)

4.44

Isoelectric Point (pI)

45.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 56
AciI CCGC 1 cut(s) 297
AcuI CTGAAG 1 cut(s) 27
AgsI TTSAA 3 cut(s) 89, 110, 271
AluBI AGCT 1 cut(s) 130
AluI AGCT 1 cut(s) 130
Alw26I GTCTC 2 cut(s) 141, 217
Asp700I GAANNNNTTC 1 cut(s) 240
BbsI GAAGAC 1 cut(s) 183
BcoDI GTCTC 2 cut(s) 141, 217
BfaI CTAG 2 cut(s) 17, 346
BglII AGATCT 1 cut(s) 253
BmsI GCATC 1 cut(s) 300
BpiI GAAGAC 1 cut(s) 183
Bsa29I ATCGAT 1 cut(s) 332
BsaBI GATNNNNATC 1 cut(s) 204
BsaJI CCNNGG 1 cut(s) 300
BsaXI ACNNNNNCTCC 4 cut(s) 138, 168, 263, 293
Bse118I RCCGGY 1 cut(s) 313
Bse1I ACTGG 1 cut(s) 134
Bse8I GATNNNNATC 1 cut(s) 204
BseCI ATCGAT 1 cut(s) 332
BseDI CCNNGG 1 cut(s) 300
BseJI GATNNNNATC 1 cut(s) 204
BseNI ACTGG 1 cut(s) 134
BseRI GAGGAG 1 cut(s) 271
Bsh1285I CGRYCG 1 cut(s) 156
BshVI ATCGAT 1 cut(s) 332
BsiEI CGRYCG 1 cut(s) 156
BsiSI CCGG 1 cut(s) 314
BsmAI GTCTC 2 cut(s) 141, 217
Bsp143I GATC 2 cut(s) 253, 322
BspACI CCGC 1 cut(s) 297
BspDI ATCGAT 1 cut(s) 332
BspHI TCATGA 1 cut(s) 232
BsrFI RCCGGY 1 cut(s) 313
BsrI ACTGG 1 cut(s) 134
BssAI RCCGGY 1 cut(s) 313
BssECI CCNNGG 1 cut(s) 300
BssMI GATC 2 cut(s) 253, 322
Bst6I CTCTTC 1 cut(s) 244
BstC8I GCNNGC 1 cut(s) 37
BstDEI CTNAG 1 cut(s) 170
BstKTI GATC 2 cut(s) 256, 325
BstMAI GTCTC 2 cut(s) 141, 217
BstMBI GATC 2 cut(s) 253, 322
BstMCI CGRYCG 1 cut(s) 156
BstV2I GAAGAC 1 cut(s) 183
BstX2I RGATCY 1 cut(s) 253
BstYI RGATCY 1 cut(s) 253
Bsu15I ATCGAT 1 cut(s) 332
BsuTUI ATCGAT 1 cut(s) 332
Cac8I GCNNGC 1 cut(s) 37
CciI TCATGA 1 cut(s) 232
Cfr10I RCCGGY 1 cut(s) 313
ClaI ATCGAT 1 cut(s) 332
CviAII CATG 1 cut(s) 233
CviJI RGCY 3 cut(s) 130, 241, 305
CviKI_1 RGCY 3 cut(s) 130, 241, 305
DdeI CTNAG 1 cut(s) 170
DpnI GATC 2 cut(s) 255, 324
DpnII GATC 2 cut(s) 253, 322
Eam1104I CTCTTC 1 cut(s) 244
EarI CTCTTC 1 cut(s) 244
Eco57I CTGAAG 1 cut(s) 27
FaeI CATG 1 cut(s) 236
FaiI YATR 1 cut(s) 234
FatI CATG 1 cut(s) 232
FblI GTMKAC 1 cut(s) 56
FspBI CTAG 2 cut(s) 17, 346
HapII CCGG 1 cut(s) 314
Hin1II CATG 1 cut(s) 236
HincII GTYRAC 1 cut(s) 26
HindII GTYRAC 1 cut(s) 26
HinfI GANTC 4 cut(s) 141, 149, 200, 225
HpaII CCGG 1 cut(s) 314
Hpy166II GTNNAC 2 cut(s) 26, 57
Hpy188I TCNGA 3 cut(s) 146, 216, 292
Hpy188III TCNNGA 2 cut(s) 17, 233
Hpy8I GTNNAC 2 cut(s) 26, 57
Hpy99I CGWCG 2 cut(s) 200, 278
HpyAV CCTTC 2 cut(s) 14, 57
HpyCH4IV ACGT 1 cut(s) 273
HpyF3I CTNAG 1 cut(s) 170
HpySE526I ACGT 1 cut(s) 273
Hsp92II CATG 1 cut(s) 236
Kzo9I GATC 2 cut(s) 253, 322
LmnI GCTCC 1 cut(s) 127
LpnPI CCDG 2 cut(s) 147, 327
LweI GCATC 1 cut(s) 300
MaeI CTAG 2 cut(s) 17, 346
MaeII ACGT 1 cut(s) 273
MalI GATC 2 cut(s) 255, 324
MboI GATC 2 cut(s) 253, 322
MboII GAAGA 3 cut(s) 20, 188, 261
MflI RGATCY 1 cut(s) 253
MluCI AATT 1 cut(s) 260
MlyI GAGTC 3 cut(s) 135, 143, 219
MmeI TCCRAC 2 cut(s) 239, 309
MnlI CCTC 5 cut(s) 203, 239, 289, 292, 310
MroXI GAANNNNTTC 1 cut(s) 240
MseI TTAA 2 cut(s) 119, 162
MspI CCGG 1 cut(s) 314
NdeII GATC 2 cut(s) 253, 322
NlaIII CATG 1 cut(s) 236
NmeAIII GCCGAG 1 cut(s) 281
PagI TCATGA 1 cut(s) 232
PcsI WCGNNNNNNNCGW 1 cut(s) 338
PdmI GAANNNNTTC 1 cut(s) 240
PfeI GAWTC 1 cut(s) 200
PflFI GACNNNGTC 1 cut(s) 152
PleI GAGTC 3 cut(s) 135, 143, 219
PpsI GAGTC 3 cut(s) 135, 143, 219
PsuI RGATCY 1 cut(s) 253
PsyI GACNNNGTC 1 cut(s) 152
SaqAI TTAA 2 cut(s) 119, 162
Sau3AI GATC 2 cut(s) 253, 322
SchI GAGTC 3 cut(s) 135, 143, 219
SetI ASST 8 cut(s) 25, 33, 78, 94, 115, 132, 183, 276
SfaNI GCATC 1 cut(s) 300
Sse9I AATT 1 cut(s) 260
SsiI CCGC 1 cut(s) 297
SspMI CTAG 2 cut(s) 17, 346
TaiI ACGT 1 cut(s) 276
TaqI TCGA 6 cut(s) 139, 156, 195, 244, 321, 332
TaqII GACCGA 1 cut(s) 142
TasI AATT 1 cut(s) 260
TfiI GAWTC 1 cut(s) 200
Tru1I TTAA 2 cut(s) 119, 162
Tru9I TTAA 2 cut(s) 119, 162
TspDTI ATGAA 3 cut(s) 39, 221, 249
Tth111I GACNNNGTC 1 cut(s) 152
XbaI TCTAGA 1 cut(s) 16
XmiI GTMKAC 1 cut(s) 56
XmnI GAANNNNTTC 1 cut(s) 240
XspI CTAG 2 cut(s) 17, 346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.