Rmu_sc0002006.1_g000017

Serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002006.1
OG0011033
Physical Location & Seq
Reverse (-)
92350 .. 96781
4432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002006.1_g000017.1.cds

Sequence Viewer

Length: 3594 bp
atggctcctgagctttttgaagacgggggtgtccattcatatgcatctgatttctgggcccttggttgtgtactatatgaatgctatgcggggaagcctccctttgtggggagagaatttactcagctagtgaagtccatcctctcagatccaatacctcctctacctggcactcctagtcgtccttttgtcaatctaataaattctttactcatcaaggatccagctgaacgaatacagtggcctgaactttgtggtcatgctttctggagaaccaagttaaatctagtgcctctacctcctcagcctgcttttgcaaatatgctagagcaatatgctaagccattgtcaatacgtaatggtgagaacaggactcctaaatctcgccaaaacgaggttaaaggagcttcaaagcaggatgagaattctgtagtaggattgaaaggccatggaactccagtcaggggcacacctggaagtcggagaactcaagcaaaggtatctggcagagcagttgatgaaaagcaaaaggatccttctggtactaccaggggtgtgaatcttttgagactctcaagaatagcaaagcagaacttgcagagggaaaatgagaaagagaattaccggaggctagtgtctactaattctgagaatgattcagaagtcaaaattgagaacactgatatggaacttgattttaatgaaaacactgaagatgatgcacaggatgaatctgatgggccagataaccaagcttcactggatgacaaatcttcaagtcaaaatcaggagcaggttaaagtggaagagatggaaaataacataaacctgtcagatacctcgtctgtggtaaatgcttctgcatcaaatgaatcaacagcatgtgatcaggaatcaccacagaatattgaagtggctgcaattccatgcagtgccagtcctcagataaaaaatcagagatttaaggaaggttctggatctgcagttgactatgattctgcaaaatcgtcaaataacctttcagaggttctttggcatccatctgatctttcagtcagacctgtaatgcctaacagaaaagctgataaaacttcggaggtaattccttcacttccctttgaggcactgcaagcttctgattttgtgaagatgtctaaagagcaattggatgcacttaccaataagattatagccatttttaatgggaacattagcattggggagaagcagaatgcacttagataccttgagatgttaaccaacaatgcggatgctgctaatatcttgaccaatggacccatcatgcttatccttgttaaaatgcttcgacagaccaaggctttggctttgcgtgtccaagttgcttcactgattggtttattgattcgacattctacttttattcatgatgatttggcaaattctggaattttgggttcactgagcgatggccttggagacaggcaggaaaaagtgaggagattttctatggctgctttaggtgagctgctattctatatttcaactcaaagtgagcaagttggagataacaatcctactgagtctccatctaaggaaagccggtccacgtctggttggcaggtctccaatttattgctttccaaggtggcatcaattttacgaaaaggagaggatgatttaactcagctttatgcattgaggacgattgaaaatatctgtagccaagcagggcactgggcagctcgtttgaacagccagggcgtgattaataacctgtgctatatatatagggctgctgggaaacaggagagcatgagacttacagcaggatcatgtttggtccgtcttgttcgtttcaatccacctagcattcagcaagtaattgatattctttctttaaaggaaatagcatctgcaattatcaagggcagtctgagggagcagcaaatcagcttaaacctcttgaacatggccatgcttggaagtcacaatttcacaaactttggcaggcacctcctgccactgatggaggataagaatattgttccaagtcttgtgtctcttattgagcagggaagtgaagttttgaaaggaaaagcgcttgtttttgttgctcttctttgtaaaaatagcagttccaagagcagtaggaggtggctgccacattttttttgcaatgccaggttactgtctatggtggacaggctggcaaaagagaaagatcagtatgtgaggcagtgtttagatgcatttgtttgtgttgtggcttctgttatacctggtttactggatactataactggtgacattcagcaatcaatgggaaggcgccatgtacatctatctcccctgaacagtagagctactcctaagaccaacattcatatgctccctgtagttctccatcttcttcgaagctcgtcttttaagcataaggtggtgagtgatcaggtcctgcagcagttggcaaatttaataaaaatcgtggaaacaccatttcagggcagggatgactttcaaatcactcttcttcgaattcttgaatctgttaccgaggagtcccttgtaattctcaaaagccctgatatttttactcgtgaggttctccccagtttggctgttctgtataagggcaacaaggatggtgacgccaggtttctgtgtttgaaaatcttgtttgatgtgatggtaatttttcttaatgaacaatctgaagatgagcaaaggtccaaagaattgcaatccatatccaatacaaactttcttcctctctacccttccctgattgaagacgaagatccaatccccttgtacgcacaaaagctgcttgtgatgctgattgattataattacatcaaaattgcagacattctacatctgaagatagtctcgcaatgctttgagtttttgctgggcgatctctcaagtgcaaatgtgaacaatgttatgctatgcctggctctgacatctgctcctgaaatggaaaccaagttactttctcagctgagggtagttaggaaaataggaaatcttctagagcttgtatatgcaaaagatatggaagattttttggaaccaactcttggtctgtgtagggctttccttttacgttcagtgagtggtagaaagggcttcacctattcaacagaacctgctcttttgggtgatgtgtcttctgagccaagttgtgatcagcagcaaggtataagagatatcatggactttgccagcaatattggtgtattgctagagttaagtaggtctcatgtaggaaatgtggcagatatagcttcagaatgtgttgtcttgttgctcaaggcagctccaagggaaggtactgctggtctactaactaatcttccaaaagttactgcaatgcttgagtcttggcgcagaggcacatctcatttgttggtgcagcgagtgctacatgcacttggttatgcttgtaggcagtatttgttacatgcaatgataatgtcgatatcgatacctgagattccaagaattgagggcatagtttctgagcttaaaagttcaggtgtacctgctttagccactgctgcttttcatgtggctgtggagttgcagcggcttcctcgctgcatgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000226 GO:0000278 GO:0000281 GO:0000910 GO:0000911 GO:0000912 GO:0000914 GO:0001932 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005819 GO:0005856 GO:0005911 GO:0006996 GO:0007010 GO:0007017 GO:0007049 GO:0007275 GO:0007349 GO:0007399 GO:0008017 GO:0008092 GO:0008150 GO:0009506 GO:0009524 GO:0009555 GO:0009556 GO:0009574 GO:0009653 GO:0009966 GO:0009987 GO:0010245 GO:0010342 GO:0010646 GO:0010975 GO:0015630 GO:0015631 GO:0016043 GO:0019220 GO:0019222 GO:0019953 GO:0022008 GO:0022402 GO:0022414 GO:0022607 GO:0023051 GO:0030054 GO:0030154 GO:0030334 GO:0031323 GO:0031344 GO:0031399 GO:0032268 GO:0032501 GO:0032502 GO:0032506 GO:0032872 GO:0032879 GO:0034293 GO:0040012 GO:0042325 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043408 GO:0043934 GO:0044085 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045595 GO:0045664 GO:0046328 GO:0048229 GO:0048236 GO:0048583 GO:0048646 GO:0048699 GO:0048731 GO:0048856 GO:0048869 GO:0050767 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051171 GO:0051174 GO:0051239 GO:0051246 GO:0051270 GO:0051301 GO:0051321 GO:0051704 GO:0051960 GO:0055044 GO:0060255 GO:0060284 GO:0061640 GO:0065007 GO:0070302 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090036 GO:0120035 GO:1900744 GO:1902407 GO:1902410 GO:1902531 GO:1903046 GO:1903047 GO:2000026 GO:2000145 GO:2001222
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase

Protein Analysis

1197

Amino Acids

132.53

Weight (kDa)

6.23

Isoelectric Point (pI)

49.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011033)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G33940 AT1G33940 AT5G18700
fragaria_vesca FvH4_4g17050 FvH4_4g17050
malus_domestica MD13G1174600.v1.1 MD16G1176300.v1.1
prunus_persica Prupe.1G143100_v2.0.a1
pyrus_communis pycom13g15030 pycom16g14770
rosa_chinensis RchiOBHm_Chr4g0420851
rosa_laevigata RLG00000007733
rosa_multiflora Rmu_sc0002006.1_g000017
rosa_roxburghii Rroxscaffold_5G00363260
rosa_rugosa Rorug04G0166400
rosa_samantha Rh4AG227800 Rh4BG230900 Rh4CG242800 Rh4DG226100
rosa_wichuraiana Rw4G019720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2829
AasI GACNNNNNNGTC 1 cut(s) 29
Acc36I ACCTGC 4 cut(s) 784, 1591, 3142, 3538
AccB1I GGYRCC 2 cut(s) 1992, 2310
AccB7I CCANNNNNTGG 1 cut(s) 3065
AccI GTMKAC 2 cut(s) 638, 3328
AciI CCGC 3 cut(s) 89, 1268, 3574
AclWI GGATC 8 cut(s) 143, 215, 228, 527, 540, 985, 1819, 2774
AcoI YGGCCR 1 cut(s) 1953
AcsI RAATTY 7 cut(s) 116, 202, 424, 1420, 1428, 2452, 2517
AcuI CTGAAG 4 cut(s) 732, 2715, 2882, 3258
AcyI GRCGYC 2 cut(s) 2311, 2631
AfaI GTAC 6 cut(s) 72, 544, 2319, 2795, 3319, 3528
AfeI AGCGCT 1 cut(s) 2082
AjiI CACGTC 1 cut(s) 1590
AjnI CCWGG 8 cut(s) 166, 472, 548, 1737, 2162, 2260, 2633, 2937
AjuI GAANNNNNNNTTGG 2 cut(s) 3048, 3080
Alw26I GTCTC 8 cut(s) 562, 1452, 1569, 1609, 1792, 2046, 2875, 3249
AlwI GGATC 8 cut(s) 143, 215, 228, 527, 540, 985, 1819, 2774
AlwNI CAGNNNCTG 2 cut(s) 2437, 3134
Aor51HI AGCGCT 1 cut(s) 2082
AoxI GGCC 6 cut(s) 57, 242, 445, 740, 1450, 1953
ApaI GGGCCC 1 cut(s) 61
ApoI RAATTY 7 cut(s) 116, 202, 424, 1420, 1428, 2452, 2517
ArsI GACNNNNNNTTYG 2 cut(s) 1324, 1356
AseI ATTAAT 1 cut(s) 1749
AspLEI GCGC 3 cut(s) 2083, 2313, 3375
AspS9I GGNCC 8 cut(s) 57, 58, 740, 1295, 1584, 1822, 2434, 2709
AsuHPI GGTGA 8 cut(s) 374, 888, 1514, 2297, 2434, 2639, 3109, 3158
AsuII TTCGAA 2 cut(s) 2395, 2515
AvaII GGWCC 5 cut(s) 1295, 1584, 1822, 2434, 2709
BaeGI GKGCMC 3 cut(s) 61, 470, 1716
BalI TGGCCA 1 cut(s) 1955
BamHI GGATCC 2 cut(s) 220, 532
BanI GGYRCC 2 cut(s) 1992, 2310
BanII GRGCYC 1 cut(s) 61
BauI CACGAG 1 cut(s) 2577
BbsI GAAGAC 3 cut(s) 27, 2778, 3147
BbvCI CCTCAGC 2 cut(s) 303, 2987
BciT130I CCWGG 8 cut(s) 168, 474, 550, 1739, 2164, 2262, 2635, 2939
BciVI GTATCC 1 cut(s) 2266
BclI TGATCA 3 cut(s) 886, 2428, 3172
BcoDI GTCTC 8 cut(s) 562, 1452, 1569, 1609, 1792, 2046, 2875, 3249
BfaI CTAG 8 cut(s) 128, 177, 287, 326, 632, 1848, 3017, 3230
BfmI CTRYAG 5 cut(s) 429, 981, 1699, 2376, 2438
BfoI RGCGCY 2 cut(s) 2084, 2314
BfuAI ACCTGC 4 cut(s) 784, 1591, 3142, 3538
BfuI GTATCC 1 cut(s) 2266
BlpI GCTNAGC 1 cut(s) 339
Bme1390I CCNGG 8 cut(s) 168, 474, 550, 1739, 2164, 2262, 2635, 2939
Bme18I GGWCC 5 cut(s) 1295, 1584, 1822, 2434, 2709
BmgBI CACGTC 1 cut(s) 1590
BmgT120I GGNCC 8 cut(s) 57, 58, 740, 1295, 1584, 1822, 2434, 2709
BmiI GGNNCC 8 cut(s) 6, 59, 222, 534, 1297, 1994, 2312, 3057
BmrFI CCNGG 8 cut(s) 168, 474, 550, 1739, 2164, 2262, 2635, 2939
BmrI ACTGGG 2 cut(s) 1726, 2586
BmuI ACTGGG 2 cut(s) 1726, 2586
BpiI GAAGAC 3 cut(s) 27, 2778, 3147
BpmI CTGGAG 2 cut(s) 289, 441
Bpu10I CCTNAGC 3 cut(s) 9, 303, 2987
Bpu1102I GCTNAGC 1 cut(s) 339
Bpu14I TTCGAA 2 cut(s) 2395, 2515
BpuEI CTTGAG 6 cut(s) 474, 559, 1268, 2890, 3281, 3383
Bsa29I ATCGAT 1 cut(s) 3470
BsaAI YACGTR 1 cut(s) 356
BsaBI GATNNNNATC 1 cut(s) 1551
BsaHI GRCGYC 2 cut(s) 2311, 2631
BsaI GGTCTC 2 cut(s) 1609, 3249
BsaJI CCNNGG 9 cut(s) 61, 448, 549, 1335, 1453, 1623, 1738, 2535, 3308
BsaWI WCCGGW 1 cut(s) 624
BsaXI ACNNNNNCTCC 4 cut(s) 1549, 1579, 2938, 2968
Bse118I RCCGGY 1 cut(s) 1581
Bse1I ACTGG 7 cut(s) 458, 765, 936, 1721, 2274, 2287, 2592
Bse3DI GCAATG 4 cut(s) 2164, 2882, 3363, 3459
Bse8I GATNNNNATC 1 cut(s) 1551
BseBI CCWGG 8 cut(s) 168, 474, 550, 1739, 2164, 2262, 2635, 2939
BseCI ATCGAT 1 cut(s) 3470
BseDI CCNNGG 9 cut(s) 61, 448, 549, 1335, 1453, 1623, 1738, 2535, 3308
BseJI GATNNNNATC 1 cut(s) 1551
BseMI GCAATG 4 cut(s) 2164, 2882, 3363, 3459
BseNI ACTGG 7 cut(s) 458, 765, 936, 1721, 2274, 2287, 2592
BseRI GAGGAG 4 cut(s) 150, 291, 1492, 2552
BseSI GKGCMC 3 cut(s) 61, 470, 1716
BseYI CCCAGC 2 cut(s) 1778, 2893
BsgI GTGCAG 1 cut(s) 3419
BshFI GGCC 6 cut(s) 59, 244, 447, 742, 1452, 1955
BshNI GGYRCC 2 cut(s) 1992, 2310
BshVI ATCGAT 1 cut(s) 3470
BsiSI CCGG 2 cut(s) 625, 1582
BslFI GGGAC 1 cut(s) 2527
BsmAI GTCTC 8 cut(s) 562, 1452, 1569, 1609, 1792, 2046, 2875, 3249
BsmFI GGGAC 1 cut(s) 2527
BsmI GAATGC 3 cut(s) 86, 1237, 1851
BsnI GGCC 6 cut(s) 59, 244, 447, 742, 1452, 1955
Bso31I GGTCTC 2 cut(s) 1609, 3249
Bsp119I TTCGAA 2 cut(s) 2395, 2515
Bsp120I GGGCCC 1 cut(s) 57
Bsp1286I GDGCHC 3 cut(s) 61, 470, 1716
Bsp1407I TGTACA 1 cut(s) 2317
Bsp1720I GCTNAGC 1 cut(s) 339
Bsp19I CCATGG 1 cut(s) 448
BspACI CCGC 3 cut(s) 89, 1268, 3574
BspANI GGCC 6 cut(s) 59, 244, 447, 742, 1452, 1955
BspDI ATCGAT 1 cut(s) 3470
BspHI TCATGA 1 cut(s) 1405
BspLI GGNNCC 8 cut(s) 6, 59, 222, 534, 1297, 1994, 2312, 3057
BspMAI CTGCAG 2 cut(s) 985, 2442
BspMI ACCTGC 4 cut(s) 784, 1591, 3142, 3538
BspPI GGATC 8 cut(s) 143, 215, 228, 527, 540, 985, 1819, 2774
BspQI GCTCTTC 1 cut(s) 2103
BspT104I TTCGAA 2 cut(s) 2395, 2515
BspT107I GGYRCC 2 cut(s) 1992, 2310
BspTNI GGTCTC 2 cut(s) 1609, 3249
BsrDI GCAATG 4 cut(s) 2164, 2882, 3363, 3459
BsrFI RCCGGY 1 cut(s) 1581
BsrGI TGTACA 1 cut(s) 2317
BsrI ACTGG 7 cut(s) 458, 765, 936, 1721, 2274, 2287, 2592
BssAI RCCGGY 1 cut(s) 1581
BssECI CCNNGG 9 cut(s) 61, 448, 549, 1335, 1453, 1623, 1738, 2535, 3308
BssNI GRCGYC 2 cut(s) 2311, 2631
BssSI CACGAG 1 cut(s) 2577
BssT1I CCWWGG 6 cut(s) 61, 448, 1335, 1453, 1623, 3308
Bst2BI CACGAG 1 cut(s) 2577
Bst2UI CCWGG 8 cut(s) 168, 474, 550, 1739, 2164, 2262, 2635, 2939
Bst4CI ACNGT 3 cut(s) 240, 2172, 2339
Bst6I CTCTTC 3 cut(s) 801, 2103, 2514
BstACI GRCGYC 2 cut(s) 2311, 2631
BstAPI GCANNNNNTGC 3 cut(s) 595, 1999, 3406
BstAUI TGTACA 1 cut(s) 2317
BstBAI YACGTR 1 cut(s) 356
BstBI TTCGAA 2 cut(s) 2395, 2515
BstC8I GCNNGC 5 cut(s) 309, 1131, 1991, 2190, 3211
BstDSI CCRYGG 1 cut(s) 448
BstENI CCTNNNNNAGG 1 cut(s) 1022
BstH2I RGCGCY 2 cut(s) 2084, 2314
BstHHI GCGC 3 cut(s) 2083, 2313, 3375
BstMAI GTCTC 8 cut(s) 562, 1452, 1569, 1609, 1792, 2046, 2875, 3249
BstMWI GCNNNNNNNGC 8 cut(s) 595, 1130, 1274, 1999, 2815, 3269, 3406, 3545
BstNI CCWGG 8 cut(s) 168, 474, 550, 1739, 2164, 2262, 2635, 2939
BstNSI RCATGY 4 cut(s) 885, 3416, 3452, 3592
BstSCI CCNGG 8 cut(s) 166, 472, 548, 1737, 2162, 2260, 2633, 2937
BstSFI CTRYAG 5 cut(s) 429, 981, 1699, 2376, 2438
BstSLI GKGCMC 3 cut(s) 61, 470, 1716
BstSNI TACGTA 1 cut(s) 356
BstV2I GAAGAC 3 cut(s) 27, 2778, 3147
BstX2I RGATCY 5 cut(s) 148, 220, 532, 977, 2779
BstXI CCANNNNNNTGG 1 cut(s) 1342
BstYI RGATCY 5 cut(s) 148, 220, 532, 977, 2779
Bsu15I ATCGAT 1 cut(s) 3470
BsuI GTATCC 1 cut(s) 2266
BsuRI GGCC 6 cut(s) 59, 244, 447, 742, 1452, 1955
BsuTUI ATCGAT 1 cut(s) 3470
BtgI CCRYGG 1 cut(s) 448
BtgZI GCGATG 1 cut(s) 1461
BtrI CACGTC 1 cut(s) 1590
BtsI GCAGTG 4 cut(s) 937, 1124, 2225, 3540
BveI ACCTGC 4 cut(s) 784, 1591, 3142, 3538
Cac8I GCNNGC 5 cut(s) 309, 1131, 1991, 2190, 3211
CaiI CAGNNNCTG 2 cut(s) 2437, 3134
CciI TCATGA 1 cut(s) 1405
CfoI GCGC 3 cut(s) 2083, 2313, 3375
Cfr10I RCCGGY 1 cut(s) 1581
Cfr13I GGNCC 8 cut(s) 57, 58, 740, 1295, 1584, 1822, 2434, 2709
ClaI ATCGAT 1 cut(s) 3470
CseI GACGC 1 cut(s) 2639
CsiI ACCWGGT 1 cut(s) 2260
Csp6I GTAC 6 cut(s) 71, 543, 2318, 2794, 3318, 3527
CviQI GTAC 6 cut(s) 71, 543, 2318, 2794, 3318, 3527
DinI GGCGCC 1 cut(s) 2312
DraI TTTAAA 1 cut(s) 1881
DrdI GACNNNNNNGTC 1 cut(s) 29
DseDI GACNNNNNNGTC 1 cut(s) 29
EaeI YGGCCR 1 cut(s) 1953
Eam1104I CTCTTC 3 cut(s) 801, 2103, 2514
EarI CTCTTC 3 cut(s) 801, 2103, 2514
Eco105I TACGTA 1 cut(s) 356
Eco130I CCWWGG 6 cut(s) 61, 448, 1335, 1453, 1623, 3308
Eco24I GRGCYC 1 cut(s) 61
Eco31I GGTCTC 2 cut(s) 1609, 3249
Eco32I GATATC 2 cut(s) 3196, 3468
Eco47I GGWCC 5 cut(s) 1295, 1584, 1822, 2434, 2709
Eco47III AGCGCT 1 cut(s) 2082
Eco57I CTGAAG 4 cut(s) 732, 2715, 2882, 3258
EcoNI CCTNNNNNAGG 1 cut(s) 1022
EcoO109I RGGNCCY 2 cut(s) 58, 2434
EcoRI GAATTC 2 cut(s) 424, 2517
EcoRII CCWGG 8 cut(s) 166, 472, 548, 1737, 2162, 2260, 2633, 2937
EcoRV GATATC 2 cut(s) 3196, 3468
EcoT14I CCWWGG 6 cut(s) 61, 448, 1335, 1453, 1623, 3308
EcoT22I ATGCAT 3 cut(s) 46, 1678, 2233
EcoT38I GRGCYC 1 cut(s) 61
EgeI GGCGCC 1 cut(s) 2312
EheI GGCGCC 1 cut(s) 2312
ErhI CCWWGG 6 cut(s) 61, 448, 1335, 1453, 1623, 3308
FalI AAGNNNNNCTT 6 cut(s) 86, 118, 578, 610, 2389, 2421
FaqI GGGAC 1 cut(s) 2527
FauI CCCGC 1 cut(s) 82
FauNDI CATATG 2 cut(s) 40, 2367
FbaI TGATCA 3 cut(s) 886, 2428, 3172
FblI GTMKAC 2 cut(s) 638, 3328
FriOI GRGCYC 1 cut(s) 61
FspBI CTAG 8 cut(s) 128, 177, 287, 326, 632, 1848, 3017, 3230
GlaI GCGC 3 cut(s) 2082, 2312, 3374
GsaI CCCAGC 2 cut(s) 1782, 2897
GsuI CTGGAG 2 cut(s) 289, 441
HaeII RGCGCY 2 cut(s) 2084, 2314
HaeIII GGCC 6 cut(s) 59, 244, 447, 742, 1452, 1955
HapII CCGG 2 cut(s) 625, 1582
HgaI GACGC 1 cut(s) 2639
HhaI GCGC 3 cut(s) 2083, 2313, 3375
Hin1I GRCGYC 2 cut(s) 2311, 2631
Hin6I GCGC 3 cut(s) 2081, 2311, 3373
HinP1I GCGC 3 cut(s) 2081, 2311, 3373
HincII GTYRAC 2 cut(s) 988, 1257
HindII GTYRAC 2 cut(s) 988, 1257
HindIII AAGCTT 2 cut(s) 753, 1131
HpaI GTTAAC 1 cut(s) 1257
HpaII CCGG 2 cut(s) 625, 1582
HphI GGTGA 8 cut(s) 374, 888, 1514, 2297, 2434, 2639, 3109, 3158
HpyAV CCTTC 6 cut(s) 546, 962, 1116, 2301, 2769, 3308
HpyCH4III ACNGT 3 cut(s) 240, 2172, 2339
HpyCH4IV ACGT 3 cut(s) 355, 1589, 3091
HpyF10VI GCNNNNNNNGC 8 cut(s) 595, 1130, 1274, 1999, 2815, 3269, 3406, 3545
HpySE526I ACGT 3 cut(s) 355, 1589, 3091
Hsp92I GRCGYC 2 cut(s) 2311, 2631
HspAI GCGC 3 cut(s) 2081, 2311, 3373
KasI GGCGCC 1 cut(s) 2310
Ksp22I TGATCA 3 cut(s) 886, 2428, 3172
KspAI GTTAAC 1 cut(s) 1257
LguI GCTCTTC 1 cut(s) 2103
LmnI GCTCC 7 cut(s) 10, 404, 790, 1921, 2376, 2959, 3310
MabI ACCWGGT 1 cut(s) 2260
MaeI CTAG 8 cut(s) 128, 177, 287, 326, 632, 1848, 3017, 3230
MaeII ACGT 3 cut(s) 355, 1589, 3091
MaeIII GTNAC 8 cut(s) 1967, 2166, 2285, 2530, 2627, 2973, 3349, 3444
MfeI CAATTG 1 cut(s) 1163
MflI RGATCY 5 cut(s) 148, 220, 532, 977, 2779
MhlI GDGCHC 3 cut(s) 61, 470, 1716
MlsI TGGCCA 1 cut(s) 1955
MluNI TGGCCA 1 cut(s) 1955
Mly113I GGCGCC 1 cut(s) 2311
MlyI GAGTC 5 cut(s) 367, 564, 1571, 2549, 3374
MmeI TCCRAC 2 cut(s) 461, 1522
Mox20I TGGCCA 1 cut(s) 1955
Mph1103I ATGCAT 3 cut(s) 46, 1678, 2233
MscI TGGCCA 1 cut(s) 1955
MslI CAYNNNNRTG 4 cut(s) 39, 683, 1955, 2366
Msp20I TGGCCA 1 cut(s) 1955
MspA1I CMGCKG 3 cut(s) 227, 2986, 3574
MspI CCGG 2 cut(s) 625, 1582
MspR9I CCNGG 8 cut(s) 168, 474, 550, 1739, 2164, 2262, 2635, 2939
MunI CAATTG 1 cut(s) 1163
Mva1269I GAATGC 3 cut(s) 86, 1237, 1851
MvaI CCWGG 8 cut(s) 168, 474, 550, 1739, 2164, 2262, 2635, 2939
MwoI GCNNNNNNNGC 8 cut(s) 595, 1130, 1274, 1999, 2815, 3269, 3406, 3545
NarI GGCGCC 1 cut(s) 2311
NcoI CCATGG 1 cut(s) 448
NdeI CATATG 2 cut(s) 40, 2367
NlaIV GGNNCC 8 cut(s) 6, 59, 222, 534, 1297, 1994, 2312, 3057
NmuCI GTSAC 3 cut(s) 1967, 2285, 2627
NsiI ATGCAT 3 cut(s) 46, 1678, 2233
NspI RCATGY 4 cut(s) 885, 3416, 3452, 3592
NspV TTCGAA 2 cut(s) 2395, 2515
PagI TCATGA 1 cut(s) 1405
PciSI GCTCTTC 1 cut(s) 2103
PctI GAATGC 3 cut(s) 86, 1237, 1851
PfeI GAWTC 9 cut(s) 559, 656, 731, 872, 893, 995, 1384, 2525, 3481
PflMI CCANNNNNTGG 1 cut(s) 3065
PleI GAGTC 5 cut(s) 367, 564, 1570, 2548, 3373
PluTI GGCGCC 1 cut(s) 2314
PpsI GAGTC 5 cut(s) 367, 564, 1570, 2548, 3373
Ppu21I YACGTR 1 cut(s) 356
PpuMI RGGWCCY 1 cut(s) 2434
PshBI ATTAAT 1 cut(s) 1749
PsiI TTATAA 1 cut(s) 2829
Psp5II RGGWCCY 1 cut(s) 2434
Psp6I CCWGG 8 cut(s) 166, 472, 548, 1737, 2162, 2260, 2633, 2937
PspFI CCCAGC 2 cut(s) 1778, 2893
PspGI CCWGG 8 cut(s) 166, 472, 548, 1737, 2162, 2260, 2633, 2937
PspN4I GGNNCC 8 cut(s) 6, 59, 222, 534, 1297, 1994, 2312, 3057
PspOMI GGGCCC 1 cut(s) 57
PspPI GGNCC 8 cut(s) 57, 58, 740, 1295, 1584, 1822, 2434, 2709
PspPPI RGGWCCY 1 cut(s) 2434
PstI CTGCAG 2 cut(s) 985, 2442
PstNI CAGNNNCTG 2 cut(s) 2437, 3134
PsuI RGATCY 5 cut(s) 148, 220, 532, 977, 2779
PvuII CAGCTG 2 cut(s) 227, 2986
RsaI GTAC 6 cut(s) 72, 544, 2319, 2795, 3319, 3528
RsaNI GTAC 6 cut(s) 71, 543, 2318, 2794, 3318, 3527
RseI CAYNNNNRTG 4 cut(s) 39, 683, 1955, 2366
SapI GCTCTTC 1 cut(s) 2103
Sau96I GGNCC 8 cut(s) 57, 58, 740, 1295, 1584, 1822, 2434, 2709
SchI GAGTC 5 cut(s) 367, 564, 1571, 2549, 3374
ScrFI CCNGG 8 cut(s) 168, 474, 550, 1739, 2164, 2262, 2635, 2939
SduI GDGCHC 3 cut(s) 61, 470, 1716
SexAI ACCWGGT 1 cut(s) 2260
SfcI CTRYAG 5 cut(s) 429, 981, 1699, 2376, 2438
SfoI GGCGCC 1 cut(s) 2312
SfuI TTCGAA 2 cut(s) 2395, 2515
SinI GGWCC 5 cut(s) 1295, 1584, 1822, 2434, 2709
SmiMI CAYNNNNRTG 4 cut(s) 39, 683, 1955, 2366
SmlI CTYRAG 6 cut(s) 489, 574, 1247, 2905, 3296, 3362
SmoI CTYRAG 6 cut(s) 489, 574, 1247, 2905, 3296, 3362
SnaBI TACGTA 1 cut(s) 356
SsiI CCGC 3 cut(s) 89, 1268, 3574
SspDI GGCGCC 1 cut(s) 2310
SspI AATATT 3 cut(s) 907, 2023, 3217
SspMI CTAG 8 cut(s) 128, 177, 287, 326, 632, 1848, 3017, 3230
StyD4I CCNGG 8 cut(s) 166, 472, 548, 1737, 2162, 2260, 2633, 2937
StyI CCWWGG 6 cut(s) 61, 448, 1335, 1453, 1623, 3308
TaaI ACNGT 3 cut(s) 240, 2172, 2339
TaiI ACGT 3 cut(s) 358, 1592, 3094
TaqI TCGA 6 cut(s) 1327, 1387, 2395, 2515, 3464, 3470
TatI WGTACW 2 cut(s) 70, 2317
TauI GCSGC 1 cut(s) 3577
TfiI GAWTC 9 cut(s) 559, 656, 731, 872, 893, 995, 1384, 2525, 3481
TseFI GTSAC 3 cut(s) 1967, 2285, 2627
Tsp45I GTSAC 3 cut(s) 1967, 2285, 2627
TspGWI ACGGA 1 cut(s) 1814
Van91I CCANNNNNTGG 1 cut(s) 3065
VpaK11BI GGWCC 5 cut(s) 1295, 1584, 1822, 2434, 2709
VspI ATTAAT 1 cut(s) 1749
XagI CCTNNNNNAGG 1 cut(s) 1022
XapI RAATTY 7 cut(s) 116, 202, 424, 1420, 1428, 2452, 2517
XbaI TCTAGA 1 cut(s) 3016
XceI RCATGY 4 cut(s) 885, 3416, 3452, 3592
XmiI GTMKAC 2 cut(s) 638, 3328
XspI CTAG 8 cut(s) 128, 177, 287, 326, 632, 1848, 3017, 3230
Zsp2I ATGCAT 3 cut(s) 46, 1678, 2233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.